Genetic variation in CADM2 as a link between psychological traits and obesity

Abstract

CADM2 has been associated with a range of behavioural and metabolic traits, including physical activity, risk-taking, educational attainment, alcohol and cannabis use and obesity. Here, we set out to determine whether CADM2 contributes to mechanisms shared between mental and physical health disorders. We assessed genetic variants in the CADM2 locus for association with phenotypes in the UK Biobank, IMPROVE, PROCARDIS and SCARFSHEEP studies, before performing meta-analyses. A wide range of metabolic phenotypes were meta-analysed. Psychological phenotypes analysed in UK Biobank only were major depressive disorder, generalised anxiety disorder, bipolar disorder, neuroticism, mood instability and risk-taking behaviour. In UK Biobank, four, 88 and 172 genetic variants were significantly (p < 1 × 10⁻⁵) associated with neuroticism, mood instability and risk-taking respectively. In meta-analyses of 4 cohorts, we identified 362, 63 and 11 genetic variants significantly (p < 1 × 10⁻⁵) associated with BMI, SBP and CRP respectively. Genetic effects on BMI, CRP and risk-taking were all positively correlated, and were consistently inversely correlated with genetic effects on SBP, mood instability and neuroticism. Conditional analyses suggested an overlap in the signals for physical and psychological traits. Many significant variants had genotype-specific effects on CADM2 expression levels in adult brain and adipose tissues. CADM2 variants influence a wide range of both psychological and metabolic traits, suggesting common biological mechanisms across phenotypes via regulation of CADM2 expression levels in adipose tissue. Functional studies of CADM2 are required to fully understand mechanisms connecting mental and physical health conditions.

Introduction

The link between mental illness and poor physical health is well-established but reasons for this are poorly understood. Patients with severe psychiatric illness have 2–3 times higher rate of metabolic syndrome than the general population worldwide, likely due to a combination of factors including the effects of psychotropic drugs, negative health behaviours, hormone dysregulation and shared genetic risk factors^1,2. A number of potential shared pathways between mood disorders and cardiometabolic disease have been suggested, including abnormal circadian rhythms, hypothalamic-pituitary-adrenal (HPA) axis dysfunction and inflammation. However, the molecular mechanisms of these pathways are poorly understood.

Single nucleotide polymorphisms (SNPs) in the locus encoding the synaptic cell adhesion molecule 2 (CADM2) on chromosome 3 have been associated with a number of psychological traits, including educational attainment³, alcohol consumption⁴, cannabis use⁵, physical activity habits⁶, risk-taking behaviour^7,8, attention-deficit/hyperactivity disorder⁹ and obesity¹⁰. Several lines of evidence point to CADM2 being the gene through which SNPs are having their effects, including genotype-specific effects on CADM2 mRNA expression levels^7,8, CADM2 being predominantly expressed in the brain, and cadm2 knockout models demonstrating relevant phenotypes. Specifically, cadm2-knockout mice have reduced adiposity, reduced systemic glucose levels, improved insulin sensitivity, increased locomotor activity, increased energy expenditure rate and raised core body temperature, suggesting an important role in systemic energy homeostasis¹¹.

We set out to systematically evaluate the relationship between CADM2 SNPs and psychological and physical traits, and assess whether there is evidence for distinct signals influencing metabolic versus psychological traits.

Materials and Methods

CADM2 locus

We defined the CADM2 locus as the CADM2 gene plus 250 kb up and downstream (Chromosome 3:84758000-86374000, UCSC genome browser, https://genome-euro.ucsc.edu/).

Study cohorts

High CVD risk population: IMPROVE is a cohort of individuals with no symptoms or history of cardiovascular disease, but with a least three classic risk factors (namely any combination of the following: family history of CVD, type 2 diabetes, smoking, hypertension, dyslipidaemia, male sex or women at least 5 years post-menopause)¹². In brief, 3,711 participants were recruited from 7 centres across 5 European countries (Finland, Sweden, the Netherlands, France and Italy) between January 2004 and June 2005. Participants completed a structured medical history and lifestyle questionnaire at baseline, as well as standard biochemical tests and genotyping. Ethics committee approval was granted by the Institutional review board (IRB) at each recruitment centre: Karolinska Institutet, Stockholm, Sweden; University of Milan, Milan, Italy; University of Kuopio and Kuopio Research Institute of Exercise Medicine, Kupio, Finland; University Hospital Groningen, Groningen, The Netherlands; University of Perugia, Perugia, Italy; Groupe Hôpital Pitie-Salpetriere, Paris, France. Informed consent was provided by all participants. The study was conducted in accordance with the Helsinki Declaration.

Young CVD case-control cohort: SCARFSHEEP is a case-control cohort of Swedish participants (N = 2,513) recruited in Stockholm^13,14. Cases were those with a first myocardial infarction before 60 years of age. Controls were age and sex-matched from the general population of the same county. Standard biochemical phenotyping was available for all participants. Approval was granted by the Karolinska Hospital and Karolinska Institutet Ethics Committees (for SCARF and SHEEP respectively). Informed consent was provided by all participants. The study conducted in accordance with the Helsinki Declaration.

CVD case-control cohort: PROCARDIS is a case-control cohort¹⁵, where cases (n = 5,688) were diagnosed with coronary artery disease before 66 years and controls (n = 2,310) are unrelated participants without coronary artery disease at 66 years. Participants were recruited from 4 centres across 4 European countries (Sweden, the UK, Germany and Italy). Participants completed a questionnaire at baseline. Standard biochemical phenotyping was available for all participants. Ethics Committee approval was granted by the IRB at each recruitment centre: the Regional Ethics Review Board at Karolinska Institutet, Stockholm in Sweden, the IRB at the University of Munster, Munster, in Germany, the IRB at the Mario Negri Institute, Milano in Italy and the IRB at the University of Oxford, Oxford, United Kingdom. Informed consent was provided by all participants. The study conducted in accordance with the Helsinki Declaration.

General population cohort: UK Biobank is a cohort of over 500,000 participants aged 40–69 at baseline¹⁶. Participants were recruited from 22 centres across the UK between 2006 and 2010. Participants completed a wide variety of baseline questionnaires and assessments. For consistency with the other cohorts, only white British participants were included. All participants provided informed consent. This study was carried out under the generic approval from the NHS National Research Ethics Service (approval letter dated 13 May 2016, Ref 16/NW/0274) and under UK Biobank applications #6553 (PI Daniel Smith) and #17689 (PI Donald Lyall). The study was conducted in accordance with the Helsinki Declaration.

Genetic data

IMPROVE participants were genotyped using both Illumina Cardio-Metabo¹⁷ and Immuno¹⁸ arrays at the SNP&SEQ Technology Platform in Uppsala. SCARFSHEEP were genotyped using the Illumina Cardio-Metabo chip¹⁷ at the SNP&SEQ Technology Platform in Uppsala. For both cohorts, imputation to the 1000 Genomes reference panel was conducted according to standard protocols, as described previously¹⁹.

PROCARDIS participants were genotyped at the Centre National du Genotypage, Paris and the SNP&SEQ Technology Platform in Uppsala, using the Illumina 1 M and 610 K arrays. Imputation to the 1000 Genomes panel was conducted according to standard protocols, as described²⁰.

UK Biobank participants were genotyped using either the Affymetrix UK Biobank Axion or the Affymetrix BiLEVE Axion array¹⁶. A modified version of SHAPEIT2 was used for phasing and IMPUTE2 for imputation. The data from UK Biobank was released in two phases. The UK Biobank was imputed to the 1000 Genomes, UK10K haplotype (first release) and Haplotype Reference Consortium (merged with the first release for the second release) reference panels²¹.

We applied standard quality control procedures to all cohorts, including SNP exclusion for low call rate (<95%), minor allele frequency (MAF < 1%), deviation from Hardy-Weinberg equilibrium (p < 5 × 10⁻⁶) or imputation quality score <0·4 and subject exclusion for sex mismatch, cryptic relatedness, low call rate (<95%) and non-Caucasian ancestry (self-reported or based on principle component analysis). For UK Biobank exclusions, further exclusions based on relatedness were applied (one of each pair of individuals with a KING-estimate kindship coefficient >0·0442 was randomly removed). After quality control, 5,684, 2,786, 5,452 and 5,361 SNPs were available for IMPROVE, SCARFSHEEP, PROCARDIS and UK Biobank respectively. In total, 2,123 SNPs were available in all four cohorts, with 2,133 overlapping between the three CAD case-control cohorts and 2,434 overlapping in the three cohorts with biomarker data.

Phenotypes

Psychiatric and psychological phenotypes were only available in the UK Biobank. The baseline questionnaire included questions to assess mood instability (“does your mood often go up and down?” variable #1920) and risk-taking behaviour (“Would you describe yourself as someone who takes risks” variable #2040). Single item questions are imperfect ways to measure psychological traits, however validity of the question used here has been demonstrated relative to more detailed phenotyping (at least for risk-taking)²² and in terms of the expected associations with psychiatric disorders (for mood instability²³ and risk-taking^7,8,24,25). Neuroticism was assessed using the Eysenck Personality Questionnaire (Revised Short Form), where 12 yes/no questions were asked. These were summed, resulting in a score between one and 12 for each individual²⁶. Phenotyping in relation to psychiatric disorders was based upon the online “Thoughts and Feelings” questionnaire²⁷, which requested information on lifetime symptoms of mental disorders. This enabled classification of likely major depressive disorder (MDD), bipolar disorder (BD), generalised anxiety disorder (GAD) and addiction).

Anthropometric and blood pressure phenotypes (BMI, waist and hip circumferences, SBP and DBP) were assessed in a standardised and comparable manner. Waist to hip circumference ratio adjusted for BMI (WHRadjBMI) was calculated as per Shungin et al.²⁸. For those on anti-hypertensive medication, values of SBP and DBP were adjusted, with 15 and 10 mmHG, respectively, being added prior to analysis²⁹. Current smoking was assessed by questionnaire in all cohorts.

Metabolic parameters were available in IMPROVE, SCARFSHEEP and PROCARDIS, where fasting glucose, lipid (HDL, LDL and TG) and CRP levels were measured using standard methodology at the Department of Clinical Chemistry, Karolinska University Hospital. Fasting insulin levels were measured by radio-immunoassay^30,31. HOMA indices were calculated from fasting glucose and insulin levels as described³². Type 2 diabetes was defined as diagnosis, medication and/or fasting glucose levels ≥7 mmol/L for IMPROVE, SCARFSHEEP and PROCARDIS. The definition of T2D in UK Biobank has been described³³, and is generally comparable with the assessment used for the other cohorts.

Coronary vascular disease (CVD) was defined as clinically diagnosed myocardial infarction, symptomatic acute coronary syndrome, angina or coronary artery revascularisation before the age of 66 years for PROCARDIS¹⁵. Criteria for inclusion as a CVD case in the SCARFSHEEP study was clinical diagnosis of myocardial infarction diagnosis³⁴. For UK Biobank, CVD was defined as clinical diagnosis of heart attack/myocardial infarction or angina (variable # 6150).

Statistical analyses

All continuous phenotypes were assessed for normality and, where necessary, were natural log transformed prior to analysis. For each cohort, phenotypes were analysed in PLINK 1.07 using linear or logistic regression (for continuous vs. binary traits respectively), assuming additive allelic effects. With the exception of WHRadjBMI, all models included age, sex and population structure (3 principal components for PROCARDIS, SCARSHEEP and IMPROVE, 8 for UK Biobank), with further adjustment for genotyping chip being applied for UK Biobank and PROCARDIS analyses. For analysis of lipid traits, lipid-lowering medication and CVD case-control status were included as a covariates. For glucometabolic traits, individuals with type 2 diabetes were excluded and CVD case-control status was included as a covariate.

Results from the individual studies were combined in inverse variance-weighted meta-analyses using METAL³⁵ (with binary effect sizes being analysed as Beta coefficients). Inverse variance-weighted meta-analysis was chosen, as the phenotype measurements and data transformation were comparable (including consistent units) between studies. Averages and standard errors of allele frequencies were computed. No additional filters were applied. Supplementary Table 1 summarises the phenotypes analysed in each cohort, covariates used and total sample number in the meta-analyses. Only SNPs present in 3 (of 3 or 4) cohorts were considered. Despite the prior knowledge implicating this locus in mental and physical health traits, we used a conservative approach, with genome-wide significance being set at p < 5 × 10⁻⁸ and suggestive evidence of association being set at p < 1 × 10⁻⁵. Locuszoom was used to visualise the results³⁶.

Genetic architecture

In order to determine whether the different traits have distinct signals, or whether there is one signal influencing all traits, two approaches were used:

Firstly, SNPs meeting suggestive or genome-wide significance thresholds for at least one phenotype (candidate SNPs) were identified and linkage disequilibrium (LD) assessed. For analysis of genetic architecture, a random subset of 1000 unrelated white British participants from the UK Biobank were selected. In this subset of UK Biobank, candidate SNPs were filtered to leave only independent SNPs, using PLINK (independent pairwise selection with default settings, including LD r² threshold 0·5). LD between the independent SNPs and lead/index SNPs was calculated and visualised using Haploview³⁷.

Secondly, conditional analyses were performed to further examine the possibility of multiple signals in the CADM2 locus. Here, the risk-taking and BMI analyses were repeated, with the index SNP (coded as an additive genetic effect, namely 0 for common homozygote, 1 for heterozygotes and 2 for rare homozygotes) from each other phenotype in turn included as a covariate.

Data-mining

The GWAS catalogue (https://www.ebi.ac.uk/gwas/, accessed 2018–09–04, 3:84,758,000–86,374,001) was used to identify CADM2 locus SNPs previously associated with relevant phenotypes (specifically cardio-metabolic and psychiatric disorder-related traits). All SNPs in the CADM2 locus with suggestive or genome-wide evidence for association with at least one phenotype were assessed for predicted functional effects using the Variant Effect Predictor³⁸. For lead and index SNPS, the GTEx portal³⁹ was queried to identify genotype-specific gene expression patterns (or expression quantitative traits loci (eQTLs)).

Results

The cohort characteristics are presented in Table 1 and the phenotypes assessed are presented in Table 2.

Table 1.

Cohort characteristics.

	UK Biobank	IMPROVE	PROCARDIS	SCARFSHEEP
N	408961	3390	7998	3417
Male	221052 (54.0)	1634 (48.2)	6009 (75.1)	2459 (72.0)
CAD cases	8319 (2.0)	0 (0)	5688 (71.1)	1525 (44.6)
T2D cases	17766 (4.3)	908 (26.8)	1157 (14.5)	341 (10.0)
Age (years)	56.9 (8.0)	64.2 (5.4)	60.0 (8.3)	58.1 (7.27)
BMI (kg/m2)	27.42 (4.76)	27.2 (4.24)	27.9 (4.4)	26.3 (3.9)
Waist:hip ratio	0.87 (0.09)	0.91 (0.09)	0.97 (0.08)	0.94 (0.09)
SBP (mmHg)	137 (19)	142 (18)	135 (20)	135 (21)
DBP (mmHG)	82 (10)	82 (10)	81 (11)	82 (10)
Current smoking	144005 (35.3)	507 (15.0)	1137 (15.4)	1133 (33.8)
Lipid-lowering medication	43424 (26.0)	1676 (49.5)	4175 (56.6)	235 (6.8)
Anti-hypertensive medication	85463 (21.0)	1950 (57.5)	4592 (62.3)	1644 (48.1)
LDL cholesterol (mmol/L)	na	3.54 (1.00)	2.98 (0.87)	4.02 (0.99)
HDL cholesterol (mmol/L)	na	1.26 (0.36)	1.22 (0.36)	1.17 (0.36)
Triglycerides (mmol/L)	na	5.93 (1.66)	1.83 (1.26)	1.70 (1.16)
CRP (mmol/L)	na	2.97 (5.76)	3.44 (7.20)	2.94 (5.69)
Fasting glucose (mmol/L)*	na	5.28 (0.66)	5.38 (0.60)	5.10 (0.67)
Fasting insulin (pmol/L)*	na	44.6 (61.8)	57.9 (54.3)	58.6 (45.2)
HOMA B*	na	69.1 (54.1)	79.8 (32.6)	25.7 (11.0)
HOMA IR*	na	0.83 (1.10)	1.02 (0.72)	0.16 (0.11)
BD	1899 (1.4)	na	na	na
GAD	9251 (10.2)	na	na	na
MDD	31338 (28.2)	na	na	na
Addiction	7575 (5.8)	na	na	na
Mood instability	180743 (44.2)	na	na	na
Risk-takers	32735 (25.5)	na	na	na
Neuroticism score	4.11 (3.26)	na	na	na

Where: CAD, coronary artery disease; BMI, body mass index; BD, bipolar disorder; GAD, generalised anxiety disorder; MDD, major depressive disorder. *In non T2D subjects. Continuous variables are presented as mean (sd), binary variables are presented as n (%).

Table 2.

Phenotypes and N available.

Phenotype	UK Biobank	Procardis	IMPROVE	SCARFSHEEP	Maximum N
BMI*	Y	Y	Y	Y	416136
WHRadjBMI*	Y	Y	Y	Y	416136
SBP*	Y	Y	Y	Y	397163
DBP*	Y	Y	Y	Y	397163
Diabetes*	Y	Y	Y	Y	417615
Current smoking*	Y	Y	Y	Y	416136
CVD	Y	Y		Y	414116
TGs*		Y	Y	Y	14799
CRP*		Y	Y	Y	14799
HDL*		Y	Y	Y	14799
LDL*		Y	Y	Y	14799
Glucose*^		Y	Y	Y	10128
Insulin*^		Y	Y	Y	10128
HOMA-IR*^		Y	Y	Y	10128
HOMA-B*^		Y	Y	Y	10128
BD	Y				129366
GAD	Y				90536
MDD	Y				109436
Addiction	Y				129858
Mood instability	Y				393367
Risk taking	Y				328339
Neuroticism	Y				328087

Where: WHRadjBMI, waist:hip ratio adjusted for BMI; ISH, ischemic heat disease, including myocardial infarction and coronary artery disease; BD, bipolar disorder; GAD, general anxiety disorder; MDD, major depressive disorder; addiction, any addiction. All models adjusted for age, sex and population structure. *Additional adjustment for CVD status. ^Participants with T2D excluded from these analyses.

Meta-analysis of cardiovascular and metabolic phenotypes

Only SNPs present in at least 3 of the 4 cohorts were considered. It is worth noting that the heterogeneity I² value was high for many SNPs in the meta-analysis of UK Biobank, IMPROVE, PROCARDIS and SCARFHSEEP. This could be due to selection of UK vs European or population vs case-control participants. Therefore we present results for both a lead SNP (defined as the SNP with the lowest P-value) and an index SNP (defined as the SNP with the lowest p-value with heterogeneity I² = 0), but for robustness we focus on the Index SNPs.

Evidence of association was observed for BMI, with 908 SNPs reaching genome-wide significance (Index SNP rs11708632-A, Beta 0·085, p = 2·18 × 10⁻¹⁴) (Fig. 1A and Table 3), of which 166 had heterogeneity I² = 0. A further 362 SNPs met the threshold for suggestive evidence of association with BMI (p < 1 × 10⁻⁵), 140 of which had heterogeneity I² = 0 (Supplementary Table 1). For SBP, only one SNP reached genome-wide significance but heterogeneity was high (heterogeneity I² = 69%, rs146071762-A, Beta 0·248, p = 1·14 × 10⁻⁸). An additional 63 SNPs demonstrated suggestive associations with SBP, with 10 showing heterogeneity I² = 0 (Index SNP, rs6803322-A, Beta −0·024, p = 1·41 × 10⁻⁷) (Fig. 1B, Table 3, Supplementary Table 1).

Figure 1.

Regional plots for phenotypes with GWAS significant (p < 5 × 10⁻⁸) or suggestive (p < 1 × 10⁻⁵) evidence of association with the CADM2 locus. Results from meta-analysis of (A) BMI, (B) SBP, (C) CRP levels or UK Biobank-only analyses of (D) risk-taking behaviour, (E) mood instability and (F) neuroticism.

Table 3.

CADM2 SNPs with suggestive or genome-wide evidence of association.

Phenotype	Chr	SNP	Position	A1	A1F	Fse	Beta	Se	P	Effect	I2	Phet	Description	N GWAS SNPs	N suggestive SNPs
BMI	3	rs11915747	85699040	C	0.64	0.01	0.090	0.010	1.58E-19	++++	73	0.011	lead SNP	908	362
BMI	3	rs11708632	85766667	A	0.24	0.00	0.085	0.011	2.18E-14	++++	0	0.417	Index SNP with I2 = 0
SBP	3	rs146071762	85396778	A	0.51	0.02	0.248	0.044	1.14E-08	+−+?	69	0.039	lead SNP	1	63
SBP	3	rs6803322	84986088	A	0.32	0.00	−0.243	0.046	1.41E-07	−+−?	0	0.619	Index SNP with I2 = 0
CRP	3	3:85906663**	85906663	T	0.31	0.01	−0.072	0.015	2.69E-06	−−	16	0.303	lead SNP		11
CRP	3	rs11708024	85865269	A	0.30	0.01	−0.069	0.015	6.05E-06	−−	0	0.674	Index SNP with I2 = 0
risk-taking*	3	rs4856591	85612550	T	0.38		0.056	0.006	1.02E-19				Index SNP	809	172
mood instability*	3	rs818225	85382140	T	0.46		−0.023	0.005	8.12E-07				Index SNP		4
neuroticism*	3	rs818219	85374589	C	0.46		−0.038	0.008	1.54E-06				Index SNP		88

Where: A1, effect allele; A1F, effect allele frequency; I2, measure of heterogeneity (Higgens et al. 2013), Phet, heterogeneity Pvalue. ^*In UK Biobank only. Lead SNP, SNP with lowest Pvalue; Index SNP, lowest Pvalue SNP with heterogeneity I2 = 0. **Not available in UKB.

No associations were observed for WHRadjBMI, DBP, T2D or current smoking (Supplementary Fig. 1A–D). For CVD analysis, SNPs were only considered if they were present in all three cohorts. None met the threshold for suggestive significance (Supplementary Fig. 1E).

Meta-analysis of cardio-metabolic biomarkers

In the meta-analysis of cardio-metabolic biomarkers, only SNPs present in all 3 clinical cohorts were considered. Eleven SNPs demonstrated suggestive associations (p < 1 × 10⁻⁵) with CRP levels, of which five demonstrated heterogeneity I² = 0 (index SNP, rs11708024-A, Beta −0·069, p = 6·05 × 10⁻⁶. For six CRP-associated SNPs, heterogeneity was moderate (I2 16–35%) but non-significant (Table 3). No evidence for associations with lipid levels (HDL-C, LDL-C, TGs) or glucometabolic biomarkers (fasting glucose, insulin, HOMA-B, HOMA-IR) were observed (Supplementary Fig. 2).

CADM2 vs psychological and psychiatric phenotypes in the UK Biobank

As previously reported^7,8, CADM2 variants were associated with risk-taking behaviour, with 809 SNPs demonstrating genome-wide evidence of association (p < 5 × 10⁻⁸ for risk-taking behaviour (Index SNP rs4856591-T, Beta = 0.056, p = 1.02 × 10⁻¹⁹); Fig. 1D and Table 3). In addition, suggestive evidence of association was observed for neuroticism (88 SNPs, index SNP rs818219-C, beta = −0·038, p = 1.54 × 10⁻⁶) and mood instability (4 SNPs, index SNP rs818225-T, beta = −0.02283, p = 8.12 × 10⁻⁷; Fig. 1E,F and Table 3). No SNPs demonstrated suggestive evidence of association with MDD, GAD, BD or addiction (Supplementary Fig. 3).

Cross-trait observations

A total of 49 SNPs demonstrated at least suggestive associations with multiple phenotypes (Supplementary Table 2). This observation demonstrates, firstly that the same SNPs influence both metabolic and psychological traits, and secondly that effects on risk-taking, BMI and CRP were positively correlated and these were inversely correlated with effects on neuroticism, mood instability and SBP.

Genetic architecture of CADM2

In order to determine whether the associations with psychological and physical traits reflect the same or distinct signals, two approaches were used. Firstly, filtering the 1,533 candidate SNPs (SNPs meeting suggestive significance of association with any phenotype) in the 1.62 Mb CADM2 locus by LD gave 75 independent loci (Fig. 2A). The index SNPs for neuroticism (rs818219) and mood instability (rs818225) are in perfect LD, therefore represent the same signal, whereas LD between index SNPs for other traits (BMI, rs11708632; SBP, rs6803322; CRP, rs11708024; risk-taking, rs485659) is low (maximum r² = 0·37, Fig. 2B), which could indicate independent signals for each other phenotype.

Figure 2.

Linkage disequilibrium in the CADM2 locus in UK Biobank with (A) the lead SNPs, Index SNPs and independent loci, (B) the lead and index SNPs. SNPs are arranged in order of base pair position. Red dots indicate the lead and index SNPs.

Secondly, conditional analysis using the index SNPs (BMI, rs11708632; SBP, rs6803322; CRP, rs11708024; risk-taking, rs4856591; neuroticism, rs818219; mood instability, rs818225) was performed, using the UK Biobank data. If there is only one signal in the locus, then adjusting for the index SNP would remove the effects/significance of other SNPs in the locus. Alternatively, if there are additional signals in the locus which are independent of the index SNP, then adjusting for the index SNP would have little or no impact on the independent signal in terms of effect size or significance. The risk-taking results demonstrated that inclusion of index SNPs had some effect on the p-value of the risk-taking signal (Fig. 3), but the effect size was stable (primary risks analysis Beta = 0.056, conditional Betas = 0.054–0.057), which concurs with the LD analysis suggestion that the signals are independent. The BMI results were similar, but the effect size was less stable (primary BMI analysis Beta = −0.099, conditional Betas = −0.087–0.101) and the plots support the possibility of more than one signal in this region (Supplementary Fig. 4).

Figure 3.

Regional plots for analyses of (A) risk-taking, conditioned on (B) risk-taking index SNP, (C) BMI index SNP, (D) SBP index SNP, (E) CRP index SNP, (F) mood instability index SNP, (G) neuroticism index SNP.

eQTL analysis

Firstly, SNPs with genotype-specific effects on mRNA CADM2 levels were identified using the GTEx portal (Fig. 4). The location of the eQTLs appears to be tissue specific (Fig. 4): In subcutaneous adipose tissue, eQTLs are located upstream and centrally relative to the gene location, whereas those in visceral adipose tissue are restricted to the central part of the gene (Fig. 4A,B). In heart (left ventricle) tissue and skeletal muscle, eQTLs are preferentially (but not exclusively) located centrally, whereas eQTLs in lung tissue are mainly upstream (Fig. 4D,F). In contrast, there are no eQTLs for CADM2 in the brain (cerebellum), instead the eQTLs in this brain region are for CADM2-AS1 (Fig. 4C). These findings suggest the potential for differential regulation of CADM2 levels across a range of tissues, thereby explaining how different SNPs within the locus can influence a variety of traits.

Figure 4.

IGV regional plot of associations of SNPs with expression levels of CADM2 in (A) subcutaneous adipose tissue, (B) visceral adipose tissue, (C) brain-cerebellum, (D) heart-left ventricle, (E) skeletal muscle, (F) lung and (G) tibial nerve. Position in base pairs is given on the X-axis (top) and in relation to the gene (bottom). The Y-axis gives the p value for the association in each tissue. Red indicates SNPs with significant associations with CADM2 (at FDR < 5%), Grey indicates SNPs with significant associations with CADM2-AS1 (at FDR < 5%).

Secondly, 1747 SNPs with eQTL effects on CADM2 and CADM2-AS1 were identified and are presented in Supplementary Table 3. No eQTLs for CADM2-AS2 were identified. For CADM2 there were 3702 eQTLS (each SNP can have eQTL effects in more than one tissue), of which 41% were in adipose tissue (subcutaneous or visceral) and 5% in brain tissues. For CADM2-AS1, 1628 eQTLs were identified, of which 90% were in brain tissues and none were in adipose tissues.

Finally, all of the index SNPs available in GTEx (rs1170802 was not available) demonstrated eQTLs for CADM2 and none were eQTLs for CADM2-AS1 (Table 4). Expression levels of CADM2 are highest in the brain (Fig. 5A). However, it was interesting to note that the trait-increasing alleles of rs11708632 (BMI) and rs4856591 (risk-taking) were associated with increased CADM2 expression levels in adipose tissue (Fig. 5B,C). Consistent with their inverse correlations with BMI and risk-taking, the trait-decreasing alleles of rs818225 (mood instability) and rs818219 (neuroticism) were associated with increased CADM2 expression in adipose tissue (Fig. 5D,E).

Table 4.

eQTLs of lead and index SNPs.

SNP	Gene Symbol	SNP Id	P-Value	EA	NES	Tissue	Trait-increasing allele
BMI lead	CADM2	rs11915747	8.60E-07	G	−0.23	Lung	C
BMI lead	CADM2-AS1	rs11915747	1.30E-04	G	0.25	Nerve - Tibial	C
BMI index	CADM2	rs11708632	6.40E-06	A	0.27	Lung	A
BMI index	CADM2	rs11708632	5.10E-05	A	0.23	Adipose - Visceral (Omentum)	A
SBP index	CADM2	rs6803322	1.10E-08	A	0.71	Brain - Spinal cord (cervical c-1)	C
SBP index	CADM2	rs6803322	1.50E-06	A	0.19	Muscle - Skeletal	C
SBP index	CADM2	rs6803322	7.20E-06	A	0.2	Adipose - Subcutaneous	C
CRP lead	CADM2-AS1	3:85906663	2.80E-08	T	0.52	Brain - Cerebellum	TGTTGCTCAG
CRP lead	CADM2-AS1	3:85906663	1.30E-06	T	0.56	Brain - Caudate (basal ganglia)	TGTTGCTCAG
CRP lead	CADM2-AS1	3:85906663	1.60E-05	T	0.29	Nerve - Tibial	TGTTGCTCAG
CRP lead	CADM2-AS1	3:85906663	3.60E-05	T	0.49	Brain - Cerebellar Hemisphere	TGTTGCTCAG
risk-taking	CADM2	rs4856591	6.30E-16	G	−0.39	Lung	T
risk-taking	CADM2	rs4856591	6.30E-07	G	−0.22	Adipose - Subcutaneous	T
risk-taking	CADM2	rs4856591	1.70E-06	G	−0.39	Heart - Left Ventricle	T
risk-taking	CADM2	rs4856591	2.10E-06	G	−0.22	Adipose - Visceral (Omentum)	T
neuroticism	CADM2	rs818219	3.80E-06	C	0.19	Adipose - Subcutaneous	T
neuroticism	CADM2	rs818219	1.20E-04	C	0.14	Muscle - Skeletal	T
mood instability	CADM2	rs818225	4.20E-05	T	0.17	Adipose - Subcutaneous	C

NES, Normalised effect size.

Figure 5.

Expression of CADM2 mRNA is (A) predominantly observed in the brain and higher levels are associated with (B) the BMI-increasing allele of rs11708632 (A, Alt), (C) the risk-taking allele of rs4856591 (T, Ref), (D) the mood instability-decreasing allele of rs818225 (T, Alt) and the neuroticism-decreasing allele of rs818219 (C, Alt).

Data-mining

None of the index SNPs have previously been associated with any traits in the GWAS catalogue. Additionally, none of the candidate SNPs were predicted by Variant Effect Predictor to have more than low or modifier impact.

SNPs in the CADM2 locus which have previously been associated with psychological or metabolic traits are presented in Supplementary Table 4. Where comparison was possible, SNPs with reported effects on measures of obesity demonstrated consistent effect directions in our study compared to those previously reported^10,28,40,41, with one exception: rs12495178 has the opposite effect directions in the Japanese population⁴² compared to our study. It is noteworthy that SNPs associated with educational attainment or intelligence^3,43, were associated with increased BMI, which is somewhat surprising, but consistent with effects on risk-taking behaviour^7,8. Maybe unsurprisingly, rs62253088-T (associated with strenuous exercise⁶) had positive associations with risk-taking and negative associations with neuroticism. Other associations with physical activity habits⁶ and alcohol consumption⁴ demonstrate less consistent associations with risk-taking.

Discussion

We identified novel associations between CADM2 genetic variants and SBP, CRP levels, neuroticism and mood instability, and have highlighted a possible link between SNPs associated with psychological traits and adiposity via CADM2 expression levels in adipose tissue.

Associations between CADM2 SNPs and obesity have previously been reported^{10,28,40–42,44–47} and were observed here. It is possible that the associations of CADM2 SNPs with CRP and SBP are secondary to the effects on obesity, as increased fat accumulation is associated with systemic inflammation² and reduced cardiovascular fitness⁴⁸. Associations between CADM2 SNPs and risk-taking behaviour have also been reported^7,8,25. We previously suggested that the association between risk-taking and obesity might be behavioural, with risk-takers choosing to disregard health-related advice and/or are prone to aberrant reward circuitry predisposing them to poor dietary choices and excessive intake⁷.

Pleiotropy, where genetic variants influence more than one trait, is a concern in genetic studies. Pleiotropy can be classified as biological (where a genetic variant has true effects on more than one trait), mediated (where a genetic variant has a true effect on one trait, but because there is a causal relationship between that trait and a second trait, effects of the genetic variant are seen on the second trait as well) or spurious (where biases in the study result in genetic effects on multiple traits)⁴⁹. When considering the effects of CADM2 variants on both psychological and obesity traits, a possible explanation is mediated pleiotropy, for example through physical exercise. If the CADM2 variant effects on behavioural traits such as risk-taking, neuroticism, mood instability (observed here) and physical exercise⁶ are true, then the effects on obesity might be knock-on effects of physical exercise. Whilst possible, the CADM2 variants associated with increased physical activity were associated with increased BMI⁶, therefore this logic of this argument is flawed. Spurious pleiotropy is another possibility; however there are consistent effects of CADM2 on psychological and obesity traits in a number of cohorts with different recruitment and study designs (population-based, CVD case-control, high CVD risk) and populations (European, UK, north American, Pakistan), which would be expected to differ in their biases. Whether spurious pleiotropy can result from such a variety of biases is doubtful.

In contrast, biological pleiotropy is supported by the body of evidence indicating a role for CADM2 in psychological and obesity traits from other types of studies. Mouse models demonstrate a clear effect of Cadm2 on obesity and gluco-metabolic parameters: A global Cadm2-knockout mouse demonstrated reduced body weight, improved insulin sensitivity and improved glucose tolerance⁵⁰. Furthermore, this effect was maintained when Cadm2-knockout mice were crossed with the traditional obesity model, the Leptin-knockout mouse¹¹. Rat models also demonstrate that increased Cadm2 (via a knockdown of a cadm2 regulator) reduced neurite outgrowth in response to ischemic damage⁵¹ whilst errors in axon pathfinding and neurite outgrowth were observed in Cadm2-deficient chick embryos⁵². In vivo and in vitro studies of tumour models have demonstrated that increased expression of CADM2 mRNA or protein is associated with reduced cell viability, proliferation, migration and invasion in glioma⁵³, retinoblastoma⁵⁴, renal cell⁵⁵, hepatocellular^56,57, endometrial⁵⁸, prostate⁵⁹ and oesophageal squamous cell carcinomas⁶⁰. The wide range of cell types suggests that CADM2 regulation of cell turnover could be ubiquitous. With this in mind, neuronal remodelling is important for health and pathology and requires cell turnover, so levels of CADM2 likely influence plasticity of the brain. Similarly, to increase the fat that can be stored, adipocytes either increase in volume (metabolically detrimental) or in number (metabolically benign)⁶¹. CADM2 levels could be a part of the volume vs number fate determination.

Further support for biological pleiotropy comes from the observation that CADM2 SNPs associated with risk-taking (rs4856591), neuroticism (rs818219) and mood instability (rs818225) had eQTLs for adipose tissue (and therefore potentially direct effects on adiposity). This is especially interesting in light of the established risk of obesity in psychiatric disorders and the relevance of these traits to a wider range of psychiatric disorders (MDD, GAD, SCZ, BD) than risk-taking (SCZ and BD). A common biological mechanism, such as CADM2, might also be consistent with the recent observation of a bi-directional link between depression and obesity⁶².

This study did not find evidence for effects of CADM2 on psychiatric diagnoses, although it should be noted that the number of cases for these analyses were low. We also cannot exclude psychiatric medication as a confounder in our analyses of cardiometabolic variables, however the very low percentage of individuals on psychiatric medication means that this is very unlikely. No associations were identified for CVD, which is unlikely to be due to the number of cases present. We also note that, in comparison to the Cadm2-knockout mice, no effects on glucose-related traits were observed. This may be due to a smaller sample size (N = 10,128) and thus reduced power for these biomarkers, or selection bias due to studying cardiovascular cohorts. It is also possible that effects of CADM2 on insulin sensitivity and glucose levels are secondary to effects on BMI, making it harder to discern.

A surprising finding of this study was the long-range linkage disequilibrium within the CADM2 locus, despite low LD, with effects being evident over a region of nearly 1 Mb. This means that the SNPs identified for psychological and metabolic traits are not independent. Haplotype analysis would be of value here, however the standard approaches rely on higher LD and smaller regions, so this has yet to be attempted. This consideration, combined with a plethora of eQTLs in a variety of tissues, results in complexity regarding the regulation of CADM2 levels. Further functional investigation of CADM2 is required for complete mechanistic understanding of this locus.

There are some limitations to this study, notably incomplete genetic coverage of the locus in the IMPROVE and SCARFSHEEP cohorts and reduced sample sizes for the biomarker analyses. In addition, only the UK Biobank had both psychological and cardio-metabolic phenotyping. As is typical for the majority of cardio-metabolic studies, history of psychiatric illness was an exclusion criterion for IMPROVE, SCARFSHEEP and PROCARDIS, therefore it is possible that these cohorts have lower levels of variants associated with psychiatric disorders than the general population. Conversely, these cohorts have higher rates of cardiovascular risk factors and disease than the general population (average/general population, to moderate/early CVD, to high risk/at least 3 CVD risk factors). Whilst this is a strength when looking at cardiovascular phenotypes, it is likely to contribute to the high I² demonstrated for some SNPs in the meta-analyses. Despite this, there are a number of variants that show significant associations, with I² = 0, and these were used for the follow-up analyses. The consistency in effect sizes and directions for these associations with BMI and CRP are striking, especially being irrespective of CVD risk burden. These findings also demonstrate that the effects of CADM2 variants on cardio-metabolic parameters are generalizable to a wider European ancestry population. The same cannot be assumed for the psychological phenotypes, which were analysed exclusively in white British UK Biobank participants. Strengths of the study include large sample sizes for most analyses. The meta-analyses of several cohorts provides robust results, whereas consistent phenotyping is a clear advantage of the UK Biobank study.

In conclusion, we have conducted a systematic, large-scale analysis of multiple datasets providing evidence that CADM2 represents a putative shared biological link between metabolic and psychological disorders. Future work, including animal models which investigate both metabolic and behavioural traits in the same animals, is now needed to understand the functional biological mechanisms that might explain this link.

Author Contributions

All authors contributed substantively to this work. R.J.S. conceived and designed the study. J.M., D.B., U.d.F., B.G., P.G., A.G., A.H., S.E.H., B.S., A.S., A.J.S., E.T., F.V., J.W., H.W. and R.J.S. were involved in data organisation and statistical analyses. J.M., M.E.S.B., B.C., A.F., N.G., K.J.A.J., D.M.L., L.M.L., J.W., D.J.S. and R.J.S. were involved in the interpretation of data. D.J.S., D.M.L. and J.P.P. were involved in application to UK Biobank and data coordination. J.M., D.J.S. and R.J.S. drafted the report. All authors were involved in reviewing and editing of the manuscript and approved it. J.M. and R.J.S. had full access to all the data in the study and take responsibility for the integrity and accuracy of analyses.

Data Availability

Data is available on request, contact either UK Biobank (UK Biobank-only analyses) or the corresponding author (all other analyses).

Competing Interests

The authors declare no competing interests.

Supplementary information

Supplementary information accompanies this paper at 10.1038/s41598-019-43861-9.