. 2019 Apr 24;11(4):379. doi: 10.3390/v11040379

Table 3.

Characteristics of predicted nonstructural proteins of ORF1ab in different stains of BtCoV/Rh/YN2012.

NSP	Putative Functional Domain(s)	RsYN1			RsYN2			RsYN3			RaGD
NSP	Putative Functional Domain(s)	Amino Acides Position in ORF1ab	Predicted Size (aa of Protein)	C-end Predicted Cleavage Site	Amino Acides Position in ORF1ab	Predicted Size (aa of Protein)	C-End Predicted Cleavage Site	Amino Acides Position in ORF1ab	Predicted Size (aa of Protein)	C-end Predicted Cleavage Site	Amino Acides Position in ORF1ab	Predicted Size (aa of Protein)	C-end Predicted Cleavage Site
NSP1	Unknown	M1–A195	195	VA│AP	M1-A195	195	VA│SP	M1-A195	195	VA│SP	M1-A195	195	TA│PP
NSP2	Unknown	A196–C896	701	RC│GG	S196-S889	694	RC│GG	S196-S889	694	RC│GG	P196-S889	694	RS│GG
NSP3	ADRP, PL2 pro	G897–G2463	1567	QG│SG	G890-G2453	1564	AG│SG	G890-G2453	1564	AG│SG	G890-G2462	1573	NG│SG
NSP4	Hydrophobid domain	S2464–Q2941	478	LQ│SG	S2454–Q2931	478	LQ│SG	S2454-Q2931	478	LQ│SG	S2463-Q2940	478	LQ│SG
NSP5	3CL pro	S2942–Q3243	302	LQ│ST	S2932–Q3233	302	LQ│ST	S2932-Q3233	302	LQ│ST	S2941-Q3242	302	LQ│SN
NSP6	Hydrophobid domain	S3244–Q3519	276	VQ│SK	S3234–Q3509	276	VQ│SK	S3234-Q3509	276	VQ│SK	S3243-Q3518	276	VQ│SK
NSP7	Replicase	S3520–Q3602	83	LQ│SV	S3510–Q3592	83	LQ│SV	S3510-Q3592	83	LQ│SV	S3519-Q3601	83	LQ│SV
NSP8	Replicase	S3603–Q3797	195	LQ│NN	S3593–Q3787	195	LQ│NN	S3593-Q3787	195	LQ│NN	S3602-Q3796	195	LQ│NN
NSP9	Replicase	N3798–Q3905	108	LQ│AG	N3788–Q3895	108	LQ│AG	N3788-Q3895	108	LQ│AG	N3797-Q3904	108	LQ│AG
NSP10	RNA synthesis protein	A3906–Q4041	136	VQ│SL	A3896–Q4031	136	VQ│AL	A3896-Q4031	136	VQ│AL	A3905-Q4040	136	VQ│SL
NSP11	Unknown (short peptide at the end of ORF1a)	S–D	17		A-D	17		A-D	17		S-N	17
NSP12	RdRp	S4042–Q4968	927	LQ│AA	A4032-Q4958	927	LQ│AA	A4032-Q4958	927	LQ│AA	S4041-Q4967	927	LQ│AA
NSP13	Hel, NTPase	A4969–Q5565	597	LQ│AG	A4959-Q5555	597	LQ│AG	A4959-Q5555	597	LQ│AG	A4968-Q5564	597	LQ│AG
NSP14	ExoN, NMT	A5566–Q6083	518	LQ│GL	A5556-Q6073	518	LQ│GL	A5556-Q6073	518	LQ│GL	A5565-Q6082	518	LQ│GL
NSP15	NeudoU	G6084–Q6422	339	LQ│AG	G6074-Q6412	339	LQ│SG	G6074-Q6412	339	LQ│SG	G6083-Q6421	339	LQ│SG
NSP16	2’-O-MT	A6423–K6722	300		S6413-K6712	300		S6413-K6712	300		S6422-K6723	302