Table 1. Primers for amplification and sequencing of the mitochondrial genome of Paragonimus ohirai.
Primer | Sequence (5′->3′) | Location |
---|---|---|
URNLFa | AGCCAGGTTGGTTCTTATCTAT | rrnL |
URNSRa | TACCWTGTTACGACTTAHCWCA | rrnS |
TRECOBFa | CAGATGTCYTATTGGGCTGC | cob |
TRECOBRa | GAACHRVCCACARYCCCTTAAAC | cob |
JB3Fa | TTTTTTGGGCATCCTGAGGTTTAT | cox1 |
JB4.5Ra | TAAAGAAAGAACATAATGAAAATG | cox1 |
PO1R | ACATAGCCACTAACACAGCAC | nad2 |
PO2F | TGGTTCGGGTGTTTTCTGCG | cob |
PO3R | CCCACTCAAAACGAAACCTAAG | atp6 |
PO4F | CGGTGAGGGTTCCTCTGTTG | tRNAAla |
PO5F | GTCTCACAATCCCAAATCCTGG | cox1 |
PO6F | GTTTGGGAAGTGTTGTCTGGG | cox1 |
PO7F | TCCTTTTAGGGGAGTAAAGGCC | cob |
PO8R | GCACAACCGCAACAAAGACC | atp6 |
PO9R | AGCAGCCCAATCAGAGTTACC | rrnS |
PO10F | CTGCACCAAATCCGAACGCC | nad3 |
PO11F | CTTATGGAACTGCAGCACTTC | cox2 |
PO12R | CGTACCCAACAAACATAAACC | nad5 |
PO13F | AATTTTTCGTGTTAGAGGGAG | tRNAGlu |
PO14R | GAAGATAACGAATTAGCCAAAC | cob |
PO15F | GTGGGTACTTGTATTCTGTG | nad6 |
PO16R | GTCAAAACACAAAACAAACAC | nad5 |
PO17R | CGCCGTAATTGAAGAACC | cox3 |
PO18F | GGTGTAGAAGGGTTGCAC | tRNAGlu |
PO19F | GGCACTTTTTAAGGCTGGTGG | nad5 |
PO20R | ACCTCAGATTGGAAGGAAAGCAC | NR |
PHOR | GTTACCAAAGGATCCGCCTGC | cob |
PHOWR | CGGTATGTACCCCAACTAAATC | rrnS |
POHF | ATGATTTGCAGGAGATTTCGGAC | rrnS |
PHOGLUR | CCTCTAACACGAAAAATTAAC | tRNAGlu |
GLYFa | AGTATKYYGTCTTTCCAAGTC | tRNAGly |
GLYRa | ACKAGACCHCYGACTTGGAAAGAC | tRNAGly |
Notes.
Platyhelminth-universal primers used for inital amplification of the corresponding genes/regions to get sequences to design further primers.