Table A4. Paraburkholderia species containing homologous loci of the Burkholderia T6SS‐1 cluster identified through bioinformatics analysis
Species | Strain | Chrb | Locusa | Old locus/aliasa |
---|---|---|---|---|
P. acidipaludis | NBRC 101816 | n/a | BAC01S_RS24625‐BAC01S_RS24720 | n/a |
P. aspalathi | LMG 27731 | n/a | BM438_RS23205‐BM438_RS23285 | SAMN05192563_101653‐SAMN05192563_101669 |
P. bannensis | NBRC 103871 | n/a | BBA01S_RS03935‐BBA01S_RS03850 | n/a |
P. bryophila | 376MFSha3.1 | n/a | H281_RS0127575‐H281_RS0127655 | n/a |
P. caledonica | NBRC 102488 | n/a | BCA01S_RS25625‐BCA01S_RS25545 | n/a |
P. caribensis | DSM 13236 | 3 | C2L66_RS31465‐C2L66_RS31545 | C2L66_31465‐C2L66_31545 |
P. caryophylli | Ballard 720 | n/a | C0Z17_RS09175‐C0Z17_RS09265 | C0Z17_09180‐C0Z17_09270 |
P. dilworthii | WSM3556 | n/a | F759_RS0111885‐F759_RS0111970 | n/a |
P. eburnea | LMG 29537 | n/a | BX588_RS11555‐BX588_RS30870 | BX588_10514‐BX588_1421 |
P. fungorum | GAS106B | n/a | BLS41_RS32405‐BLS41_RS32325 | SAMN05443245_6595‐SAMN05443245_6579 |
P. ginsengiterrae | DCY85 | n/a | A6V36_RS34655‐A6V36_RS34735 | A6V36_13555‐A6V36_13635 |
P. graminis | C4D1M | n/a | BGRAMDRAFT_RS31300‐BGRAMDRAFT_RS31220 | BgramDRAFT_6363‐BgramDRAFT_6347 |
P. insulsa | LMG 28183 | n/a | BX589_RS19295‐BX589_RS19215 | BX589_111106‐BX589_11190 |
P. kururiensis | M130 | n/a | G118_RS0127045‐G118_RS0127125 | n/a |
P. megapolitana | LMG 23650 | n/a | BM166_RS27120‐BM166_RS27200 | SAMN05192543_109158‐SAMN05192543_109174 |
P. nodosa | CNPSo 1341 | n/a | BFD71_RS23080‐BFD71_RS22965 | n/a |
P. oxyphila | NBRC 105797 | n/a | BO1_RS31110‐BO1_RS23945 | n/a |
P. phenazinium | GAS95 | n/a | BUS12_RS10920‐BUS12_RS10830 | SAMN05444165_2229‐SAMN05444165_2211 |
P. phenoliruptrix | BR3459a | 2 | BUPH_RS28500‐BUPH_RS28580 | BUPH_06127‐BUPH_06111 |
P. phytofirmans | PsJN | 2 | BPHYT_RS24375‐BPHYT_RS24455 | Bphyt_4909‐Bphyt_4925 |
P. rhynchosiae | WSM 3937 | n/a | C0Z16_RS18310‐C0Z16_RS18230 | C0Z16_18290‐C0Z16_18210 |
P. sediminicola | LMG 24238 | n/a | BLT79_RS22400‐BLT79_RS22480 | SAMN05192547_102957‐SAMN05192547_102973 |
P. soli | GP25‐8 | n/a | C0Z19_RS08700‐C0Z19_RS08620 | C0Z19_08720‐C0Z19_08640 |
Paraburkholderia sp. | BL18I3N2 | n/a | B0G75_RS24645‐B0G75_RS24565 | B0G75_110100‐B0G75_11084 |
Paraburkholderia sp. | BL21I4N1 | n/a | B0G83_RS22810‐B0G83_RS22905 | B0G83_109119‐B0G83_109138 |
Paraburkholderia sp. | BL25I1N1 | n/a | B0G73_RS11290‐B0G73_RS11370 | B0G73_106134‐B0G73_106151 |
Paraburkholderia sp. | C35 | n/a | DK391_RS17735‐DK391_RS17655 | n/a |
Paraburkholderia sp. | GV068 | n/a | C8K18_RS26440‐C8K18_RS26520 | C8K18_115102‐C8K18_115118 |
Paraburkholderia sp. | GV072 | n/a | C8K19_RS26210‐C8K19_RS26130 | C8K19_11551‐C8K19_11535 |
P. symbiotica | JPY 581 | n/a | C0Z20_RS18355‐C0Z20_RS18280 | C0Z20_18350‐C0Z20_18275 |
P. terricola | LMG 20594 | n/a | BUE39_RS22490‐BUE39_RS22570 | SAMN05192548_102957‐SAMN05192548_102973 |
P. tropica | LMG 22274 | n/a | BMY06_RS23990‐BMY06_RS23890 | SAMN05216550_114137‐SAMN05216550_114117 |