Table 1.

Primers and probes used in this study.

Code of primer/probe	Sequence (5’→3′)	Reference
OsHV1BF	5′- GTCGCATCTTTGGATTTAACAA-3′	Martenot et al. (2010)
OsHV1B4	5′-ACTGGGATCCGACTGACA AC-3′	Martenot et al. (2010)
OsHV1ProbeB	5′-6FAM-TGCCCCTGTCATCTTGAGGTATAGACAATC-TAMRA-3′	Martenot et al. (2010)
Vib1	5′-GGCGTAAAGCGCATGCAGGT-3′	Vezzulli et al. (2012)
Vib2	5′-GAAATT CTACCCCCCTCTACAG-3′	Vezzulli et al. (2012)
Nadak_rRNAF	5′-TCCTACGGGAGGCAGCAGT-3′	Nadkarni et al. (2002)
Nadak_rRNAR	5′-GGACTACCAGGGTATCTAATCCTGTT-3′	Nadkarni et al. (2002)
Nadak_rRNA probe	5′-6FAM-CGTATTACCGCGGCTGCTGGCAC-BHQ1-3′	Nadkarni et al. (2002)
27F	5′-AGAGTTTGATCMTGGCTCAG-3′	Lane (1991)
519R	5′-GWATTACCGCGGCKGCTG-3′	Lane (1991)
1492R	5′-TACCTTGTTACGACTT-3′	Weisburg et al. (1991)