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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2019 Jul 26;75(Pt 8):1270–1273. doi: 10.1107/S2056989019010429

Crystal structures of two isomeric 2-aryl-3-phenyl-1,3-thia­zepan-4-ones

Hemant P Yennawar a, Samuel D Peterson b, Lee J Silverberg b,*
PMCID: PMC6690465  PMID: 31417805

The crystal of 6-(4-nitro­phen­yl)-7-phenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (1), has monoclinic (P21/n) symmetry while that of its isomer 6-(3-nitro­phen­yl)-7-phenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (2), has ortho­rhom­bic (Pca21) symmetry: compound 1 has two mol­ecules, A and B, in the asymmetric unit while 2 has one. In all three mol­ecules, the seven-membered thia­zepan ring exhibits a chair conformation. Except for the nitro groups, the three mol­ecules have similar conformations when overlayed in pairs.

Keywords: crystal structure, thia­zepan, seven membered ring, chair pucker, isomers

Abstract

The crystal of 6-(3-nitro­phen­yl)-7-phenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (1), C19H18N2O3S, has monoclinic (P21/n) symmetry while that of its isomer 6-(4-nitro­phen­yl)-7-phenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (2), has ortho­rhom­bic (Pca21) symmetry: compound 1 has two mol­ecules, A and B, in the asymmetric unit while 2 has one. In all three mol­ecules, the seven-membered thia­zepan ring exhibits a chair conformation with Q2 and Q3 values (Å) of 0.521 (3), 0.735 (3) and 0.485 (3), 0.749 (3) in 1 and 0.517 (5), 0.699 (5) in 2. In each structure, the phenyl rings attached to adjacent atoms of the thia­zepan ring have inter­planar angles ranging between 41 and 47°. Except for the nitro groups, the three mol­ecules have similar conformations when overlayed in pairs. Both crystal structures are consolidated by C—H⋯O hydrogen bonds.

Chemical context  

The seven-membered 1,3-thia­zepan-4-one ring system, like the similar six-membered 1,3-thia­zin-4-one and five-membered 1,3-thia­zolidin-4-one systems, is biologically active and of potential medicinal use. For example, the Bristol-Myers Squibb ACE/NEP inhibitor omapatrilat advanced to Phase II clinical trials (Graul et al., 1999; Robl et al. 1997; Tabrizchi, 2001; Cozier et al. 2018). In fact, nearly all of the known compounds with this ring system are related in structure to omapatrilat.graphic file with name e-75-01270-scheme1.jpg

Previously we reported the synthesis and crystal structure of 6,7-diphenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (Yennawar & Silverberg, 2013). Herein we report the T3P-promoted synthesis and crystal structures of two new analogs: 6-(4-nitro­phen­yl)-7-phenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (1) and 6-(3-nitro­phen­yl)-7-phenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (2), in which a nitro group substitutes at the para and meta positions, respectively, of the C-2 aromatic ring.

Structural commentary  

Compound 1 crystallizes with two mol­ecules, A (containing S1) and B (containing S2), in the asymmetric unit (Fig. 1) and 2 crystallizes with one mol­ecule (Fig. 2). The configurations of the stereogenic centers in the arbitrarily chosen asymmetric mol­ecules are (S) at C1 and (R) at C20 for 1 and (S) at C1 for 2; in both structures, crystal symmetry generates a racemic mixture. These mol­ecules adopt similar conformations and overlay closely (Fig. 3) apart from the nitro groups. The seven-membered thia­zepan rings in both structures adopt chair conformations. The puckering parameters [Q2 and Q3 (Å)] as calculated by PLATON (Spek, 2009) for mol­ecules A and B in 1 are 0.521 (3), 0.735 (3) and 0.485 (3), 0.749 (3), respectively, with equivalent values of 0.517 (5), 0.699 (5) for 2. The dihedral angles between the aromatic rings attached to the 2 and 3 positions of the thia­zepan rings are 46.93 (15) (mol­ecule 1 A), 42.50 (15) (1 B) and 42.0 (3)° (2).

Figure 1.

Figure 1

The mol­ecular structure of 1 with displacement ellipsoids drawn at the 50% probability level. C—H⋯O inter­actions are shown as dashed lines.

Figure 2.

Figure 2

The mol­ecular structure of 2 with displacement ellipsoids drawn at the 50% probability level.

Figure 3.

Figure 3

Overlay of the mol­ecule of 2 on the similarly handed mol­ecule of 1.

Supra­molecular features  

The extended structure of 1 has more extensive hydrogen bonding compared to that of 2 (Tables 1 and 2). In 1, the mol­ecules are arranged into layers propagating in the ab plane, with C—H⋯O hydrogen bonds in both the a- and b-axis directions, but not in the c-axis direction (Fig. 4). In 2, the mol­ecules link up via C—H⋯O ‘head-to-tail’ hydrogen bonds in the c-axis direction (Fig. 5) and hydro­phobic inter­actions between adjacent chains consolidate the packing in the a- and b-axis directions.

Table 1. Hydrogen-bond geometry (Å, °) for 1 .

D—H⋯A D—H H⋯A DA D—H⋯A
C1—H1⋯O6 0.98 2.41 3.390 (3) 175
C3—H3B⋯O6 0.97 2.50 3.469 (3) 174
C10—H10⋯O6i 0.93 2.60 3.408 (3) 146
C17—H17⋯O2ii 0.93 2.46 3.216 (4) 138
C20—H20⋯O3iii 0.98 2.41 3.369 (3) 165
C28—H28⋯O3iii 0.93 2.56 3.384 (4) 147

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Table 2. Hydrogen-bond geometry (Å, °) for 2 .

D—H⋯A D—H H⋯A DA D—H⋯A
C1—H1⋯O1i 0.98 2.38 3.352 (6) 173
C3—H3B⋯O1i 0.97 2.48 3.444 (5) 171

Symmetry code: (i) Inline graphic.

Figure 4.

Figure 4

Packing diagram for 1 showing C—H⋯O hydrogen bonds between mol­ecules arranged in the ab planes.

Figure 5.

Figure 5

Packing diagram for 2 viewed down the b-axis direction.

Database survey  

A 1,3-thia­zepan-4-one with a 5,6-fused benzene and a 2,3-fused triazole has been reported, but only an ORTEP representation was given, without any other data (Bakavoli et al., 2002). The structures of omapatrilat bound to proteins have been published recently (Cozier, et al. 2018). The 2,3-diphenyl structure that we previously reported showed a chair-type conformation for the thia­zepan ring [CSD (Groom et al., 2016) refcode MIHVOQ; Yennawar & Silverberg, 2013] like those reported here.

Synthesis and crystallization  

A two-necked 25 ml round-bottom flask was oven-dried, cooled under N2, and charged with a stir bar. 3- or 4-Nitrobenzaldehyde (0.907 g, 6 mmol), aniline (0.571 g, 6 mmol), and [1-(sulfanylmethyl)cyclopropyl] acetic acid (0.877 g, 6 mmol) were added. Pyridine (1.95 ml, 24 mmol) was added. Finally, 2,4,6-tripropyl-1,3,5,2,4,6-trioxatri­phospho­rinane-2,4,6-tri­oxide (T3P) in 2-methyl­tetra­hydro­furan (50 weight %; 7.3 ml, 12 mmol) was added. The reaction was stirred at room temperature and followed by TLC. The mixture was poured into a separatory funnel with di­chloro­methane and distilled water. The layers were separated and the aqueous layer was then extracted twice with di­chloro­methane. The organic fractions were combined and washed with saturated sodium bicarbonate and saturated sodium chloride and then dried over sodium sulfate and concentrated under vacuum. Further purification was carried out as indicated below for each compound.

6-(3-Nitro­phen­yl)-7-phenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (1): Chromatography on 30 g flash silica gel with mixtures of ethyl acetate and hexa­nes gave a solid. Recrystallization from 2-propanol solution gave crystals (0.5192 g, 26%), m.p. 457–458 K. X-ray-quality crystals were grown by slow evaporation from a 2-propanol solution.

6-(4-Nitro­phen­yl)-7-phenyl-5-thia-7-aza­spiro­[2.6]nonan-8-one (2): Chromatography on 30 g flash silica gel with mixtures of ethyl acetate and hexa­nes gave a solid. Recrystallization from ethyl acetate solution gave colorless crystals (0.1804 g, 9%), m.p. 480–482 K (decomposition). X-ray-quality crystals were grown by slow evaporation from an ethyl acetate solution.

Refinement  

Crystal data, data collection and structure refinement details are summarized in Table 3. The hydrogen atoms were placed geometrically (C—H = 0.93–0.98 Å) and refined as riding on their parent atoms with U iso(H) = 1.2U eq(C).

Table 3. Experimental details.

  1 2
Crystal data
Chemical formula C19H18N2O3S C19H18N2O3S
M r 354.41 354.41
Crystal system, space group Monoclinic, P21/n Orthorhombic, P c a21
Temperature (K) 298 298
a, b, c (Å) 16.993 (4), 9.955 (2), 21.243 (5) 17.478 (3), 10.4125 (19), 9.7129 (17)
α, β, γ (°) 90, 99.531 (4), 90 90, 90, 90
V3) 3543.9 (15) 1767.6 (5)
Z 8 4
Radiation type Mo Kα Mo Kα
μ (mm−1) 0.20 0.20
Crystal size (mm) 0.24 × 0.12 × 0.09 0.27 × 0.1 × 0.04
 
Data collection
Diffractometer Bruker SMART CCD area detector Bruker SMART CCD area detector
Absorption correction Multi-scan (SADABS; Bruker, 2001) Multi-scan (SADABS; Bruker, 2001)
T min, T max 0.780, 0.9 0.769, 0.9
No. of measured, independent and observed [I > 2σ(I)] reflections 30602, 8495, 3560 15240, 4261, 2403
R int 0.083 0.056
(sin θ/λ)max−1) 0.669 0.668
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.057, 0.155, 0.94 0.081, 0.249, 1.01
No. of reflections 8495 4261
No. of parameters 451 226
No. of restraints 0 1
H-atom treatment H-atom parameters constrained H-atom parameters constrained
Δρmax, Δρmin (e Å−3) 0.25, −0.26 0.55, −0.30
Absolute structure Flack (1983)
Absolute structure parameter 0.47 (19)

Computer programs: SMART and SAINT (Bruker, 2001), SHELXS (Sheldrick, 2008), SHELXL (Sheldrick, 2015) and OLEX2 (Dolomanov et al., 2009).

Supplementary Material

Crystal structure: contains datablock(s) 1, 2. DOI: 10.1107/S2056989019010429/hb7839sup1.cif

e-75-01270-sup1.cif (47.3KB, cif)

Structure factors: contains datablock(s) 1. DOI: 10.1107/S2056989019010429/hb78391sup2.hkl

e-75-01270-1sup2.hkl (415.6KB, hkl)

Supporting information file. DOI: 10.1107/S2056989019010429/hb78391sup5.mol

Structure factors: contains datablock(s) 2. DOI: 10.1107/S2056989019010429/hb78392sup4.hkl

e-75-01270-2sup4.hkl (208.8KB, hkl)

Supporting information file. DOI: 10.1107/S2056989019010429/hb78392sup6.mol

Supporting information file. DOI: 10.1107/S2056989019010429/hb78391sup6.cml

Supporting information file. DOI: 10.1107/S2056989019010429/hb78392sup7.cml

CCDC references: 1942358, 1942357

Additional supporting information: crystallographic information; 3D view; checkCIF report

Acknowledgments

We thank Euticals (AMRI) for the gift of T3P in 2-methyl­tetra­hydro­furan, Oakwood Chemicals for [1-(sulfanylmeth­yl)cyclo­prop­yl] acetic acid, and Penn State Schuylkill for financial support.

supplementary crystallographic information

6-(3-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (1). Crystal data

C19H18N2O3S F(000) = 1488
Mr = 354.41 Dx = 1.329 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
a = 16.993 (4) Å Cell parameters from 2681 reflections
b = 9.955 (2) Å θ = 2.4–28.3°
c = 21.243 (5) Å µ = 0.20 mm1
β = 99.531 (4)° T = 298 K
V = 3543.9 (15) Å3 Block, colorless
Z = 8 0.24 × 0.12 × 0.09 mm

6-(3-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (1). Data collection

Bruker SMART CCD area detector diffractometer 8495 independent reflections
Radiation source: fine-focus sealed tube 3560 reflections with I > 2σ(I)
Parallel-graphite monochromator Rint = 0.083
Detector resolution: 8.34 pixels mm-1 θmax = 28.4°, θmin = 1.4°
phi and ω scans h = −21→22
Absorption correction: multi-scan (SADABS; Bruker, 2001) k = −12→13
Tmin = 0.780, Tmax = 0.9 l = −26→28
30602 measured reflections

6-(3-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (1). Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.155 H-atom parameters constrained
S = 0.94 w = 1/[σ2(Fo2) + (0.0603P)2] where P = (Fo2 + 2Fc2)/3
8495 reflections (Δ/σ)max < 0.001
451 parameters Δρmax = 0.25 e Å3
0 restraints Δρmin = −0.26 e Å3

6-(3-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (1). Special details

Experimental. The data collection nominally covered a full sphere of reciprocal space by a combination of 4 sets of ω scans each set at different φ and/or 2θ angles and each scan (10 s exposure) covering -0.300° degrees in ω. The crystal to detector distance was 5.86 cm.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

6-(3-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (1). Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.38777 (15) 0.3850 (3) 0.24330 (13) 0.0472 (7)
H1 0.4111 0.4733 0.2374 0.057*
C2 0.52215 (16) 0.2834 (3) 0.24439 (13) 0.0458 (7)
C3 0.53440 (16) 0.3814 (3) 0.19259 (13) 0.0497 (7)
H3A 0.5906 0.3831 0.1890 0.060*
H3B 0.5197 0.4707 0.2048 0.060*
C4 0.48636 (17) 0.3471 (3) 0.12818 (13) 0.0529 (7)
C5 0.40156 (18) 0.3958 (3) 0.11569 (14) 0.0673 (9)
H5A 0.3793 0.3748 0.0718 0.081*
H5B 0.4021 0.4928 0.1198 0.081*
C6 0.5063 (2) 0.2202 (3) 0.09693 (16) 0.0785 (10)
H6A 0.4628 0.1711 0.0717 0.094*
H6B 0.5485 0.1646 0.1197 0.094*
C7 0.5293 (2) 0.3518 (3) 0.07165 (15) 0.0748 (10)
H7A 0.4996 0.3826 0.0313 0.090*
H7B 0.5853 0.3761 0.0793 0.090*
C8 0.32870 (15) 0.4017 (3) 0.28901 (13) 0.0461 (7)
C9 0.26482 (16) 0.3140 (3) 0.28908 (14) 0.0551 (8)
H9 0.2578 0.2431 0.2602 0.066*
C10 0.21165 (16) 0.3302 (3) 0.33116 (15) 0.0598 (8)
H10 0.1691 0.2710 0.3301 0.072*
C11 0.22164 (17) 0.4337 (3) 0.37465 (15) 0.0582 (8)
H11 0.1861 0.4458 0.4031 0.070*
C12 0.28542 (16) 0.5189 (3) 0.37502 (13) 0.0496 (7)
C13 0.33890 (16) 0.5053 (3) 0.33310 (13) 0.0484 (7)
H13 0.3813 0.5649 0.3345 0.058*
C14 0.43844 (15) 0.1901 (3) 0.31425 (14) 0.0456 (7)
C15 0.45269 (18) 0.2164 (3) 0.37871 (15) 0.0593 (8)
H15 0.4730 0.2995 0.3935 0.071*
C16 0.4370 (2) 0.1200 (4) 0.42134 (16) 0.0750 (10)
H16 0.4467 0.1380 0.4649 0.090*
C17 0.4070 (2) −0.0028 (3) 0.39960 (18) 0.0771 (10)
H17 0.3961 −0.0679 0.4283 0.093*
C18 0.39337 (19) −0.0286 (3) 0.33550 (18) 0.0715 (9)
H18 0.3733 −0.1118 0.3209 0.086*
C19 0.40877 (17) 0.0665 (3) 0.29254 (15) 0.0582 (8)
H19 0.3993 0.0479 0.2490 0.070*
N1 0.45322 (12) 0.2936 (2) 0.27006 (10) 0.0443 (6)
N2 0.29752 (18) 0.6265 (3) 0.42288 (12) 0.0603 (7)
O1 0.24710 (15) 0.6440 (2) 0.45664 (11) 0.0846 (7)
O2 0.35847 (16) 0.6932 (2) 0.42706 (11) 0.0858 (7)
O3 0.57139 (11) 0.19619 (19) 0.26254 (10) 0.0632 (6)
S1 0.33553 (5) 0.32922 (9) 0.16613 (4) 0.0704 (3)
C20 0.64468 (15) 0.8845 (3) 0.29410 (13) 0.0484 (7)
H20 0.6223 0.9700 0.2766 0.058*
C21 0.52037 (16) 0.7803 (3) 0.23659 (13) 0.0435 (7)
C22 0.52413 (16) 0.8762 (3) 0.18223 (13) 0.0538 (8)
H22A 0.5306 0.9668 0.1992 0.065*
H22B 0.4738 0.8727 0.1531 0.065*
C23 0.59097 (18) 0.8473 (3) 0.14525 (14) 0.0594 (8)
C24 0.67190 (18) 0.9037 (4) 0.17153 (14) 0.0725 (10)
H24A 0.6666 0.9999 0.1766 0.087*
H24B 0.7066 0.8894 0.1402 0.087*
C25 0.5874 (2) 0.7178 (4) 0.10892 (16) 0.0812 (10)
H25A 0.6374 0.6731 0.1062 0.097*
H25B 0.5429 0.6581 0.1114 0.097*
C26 0.5701 (2) 0.8472 (4) 0.07334 (16) 0.0862 (11)
H26A 0.5152 0.8656 0.0545 0.103*
H26B 0.6097 0.8807 0.0492 0.103*
C27 0.68160 (15) 0.9101 (3) 0.36255 (13) 0.0473 (7)
C28 0.66026 (17) 1.0246 (3) 0.39258 (15) 0.0611 (8)
H28 0.6247 1.0854 0.3700 0.073*
C29 0.6914 (2) 1.0492 (4) 0.45580 (16) 0.0747 (10)
H29 0.6770 1.1271 0.4752 0.090*
C30 0.74311 (19) 0.9604 (4) 0.49030 (15) 0.0686 (9)
H30 0.7634 0.9761 0.5331 0.082*
C31 0.76402 (16) 0.8479 (3) 0.45990 (14) 0.0525 (7)
C32 0.73499 (16) 0.8210 (3) 0.39678 (14) 0.0514 (7)
H32 0.7510 0.7442 0.3774 0.062*
C33 0.58190 (15) 0.6820 (3) 0.33613 (13) 0.0439 (7)
C34 0.55008 (18) 0.7007 (3) 0.39071 (15) 0.0611 (8)
H34 0.5234 0.7801 0.3966 0.073*
C35 0.5576 (2) 0.6016 (4) 0.43721 (16) 0.0797 (10)
H35 0.5369 0.6149 0.4746 0.096*
C36 0.5957 (2) 0.4837 (4) 0.42757 (18) 0.0775 (11)
H36 0.6007 0.4169 0.4586 0.093*
C37 0.62626 (18) 0.4640 (3) 0.37303 (19) 0.0719 (10)
H37 0.6514 0.3832 0.3667 0.086*
C38 0.62024 (16) 0.5631 (3) 0.32684 (14) 0.0549 (8)
H38 0.6418 0.5497 0.2898 0.066*
N3 0.57806 (12) 0.7883 (2) 0.28935 (10) 0.0425 (5)
N4 0.81967 (15) 0.7509 (3) 0.49575 (14) 0.0637 (7)
O4 0.85870 (14) 0.7871 (2) 0.54671 (11) 0.0852 (7)
O5 0.82594 (15) 0.6398 (3) 0.47322 (12) 0.0904 (8)
O6 0.46794 (11) 0.69436 (18) 0.23280 (9) 0.0551 (5)
S2 0.72025 (4) 0.83452 (9) 0.24715 (4) 0.0681 (3)

6-(3-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (1). Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0411 (15) 0.0448 (17) 0.0557 (18) 0.0023 (13) 0.0080 (13) 0.0011 (14)
C2 0.0440 (16) 0.0494 (18) 0.0444 (17) 0.0019 (14) 0.0080 (13) −0.0006 (14)
C3 0.0465 (16) 0.0500 (17) 0.0548 (19) 0.0047 (13) 0.0146 (14) 0.0025 (15)
C4 0.0653 (19) 0.0506 (18) 0.0436 (18) 0.0059 (15) 0.0115 (15) 0.0017 (15)
C5 0.070 (2) 0.077 (2) 0.053 (2) 0.0036 (18) 0.0039 (16) 0.0057 (17)
C6 0.110 (3) 0.066 (2) 0.060 (2) 0.008 (2) 0.016 (2) −0.0039 (19)
C7 0.093 (2) 0.079 (3) 0.058 (2) 0.010 (2) 0.0283 (19) 0.0086 (19)
C8 0.0420 (15) 0.0431 (17) 0.0531 (18) 0.0012 (13) 0.0072 (14) −0.0008 (14)
C9 0.0480 (16) 0.0530 (19) 0.064 (2) −0.0036 (14) 0.0083 (15) −0.0085 (15)
C10 0.0428 (16) 0.065 (2) 0.073 (2) −0.0086 (15) 0.0132 (16) −0.0031 (18)
C11 0.0503 (18) 0.067 (2) 0.059 (2) 0.0045 (16) 0.0153 (15) 0.0025 (18)
C12 0.0555 (18) 0.0419 (17) 0.0504 (19) 0.0056 (14) 0.0064 (15) 0.0006 (15)
C13 0.0439 (15) 0.0446 (17) 0.0564 (19) −0.0010 (13) 0.0072 (14) 0.0023 (15)
C14 0.0462 (15) 0.0408 (17) 0.0502 (19) −0.0002 (13) 0.0090 (13) 0.0037 (15)
C15 0.074 (2) 0.0500 (19) 0.053 (2) −0.0070 (16) 0.0077 (16) −0.0028 (16)
C16 0.112 (3) 0.064 (2) 0.052 (2) −0.004 (2) 0.020 (2) 0.0035 (19)
C17 0.102 (3) 0.059 (2) 0.077 (3) −0.001 (2) 0.035 (2) 0.013 (2)
C18 0.086 (2) 0.046 (2) 0.084 (3) −0.0154 (17) 0.020 (2) 0.001 (2)
C19 0.067 (2) 0.0486 (19) 0.059 (2) −0.0024 (16) 0.0108 (16) −0.0057 (17)
N1 0.0422 (13) 0.0429 (13) 0.0483 (14) 0.0020 (10) 0.0087 (11) 0.0027 (11)
N2 0.0754 (19) 0.0507 (17) 0.0552 (18) 0.0073 (15) 0.0121 (15) 0.0002 (14)
O1 0.1002 (18) 0.0907 (18) 0.0683 (16) 0.0102 (15) 0.0300 (14) −0.0169 (14)
O2 0.1053 (19) 0.0678 (16) 0.0867 (18) −0.0234 (14) 0.0228 (15) −0.0174 (13)
O3 0.0565 (12) 0.0635 (14) 0.0708 (14) 0.0210 (11) 0.0139 (11) 0.0136 (11)
S1 0.0524 (5) 0.0998 (7) 0.0557 (5) −0.0098 (4) −0.0008 (4) −0.0024 (5)
C20 0.0453 (15) 0.0448 (17) 0.0525 (18) −0.0066 (13) 0.0007 (14) 0.0001 (14)
C21 0.0384 (15) 0.0459 (17) 0.0455 (17) 0.0038 (13) 0.0051 (13) −0.0022 (14)
C22 0.0504 (17) 0.0551 (19) 0.0525 (19) −0.0061 (14) −0.0017 (14) 0.0043 (15)
C23 0.0622 (19) 0.070 (2) 0.0460 (19) −0.0133 (17) 0.0093 (15) 0.0019 (16)
C24 0.069 (2) 0.099 (3) 0.051 (2) −0.0195 (19) 0.0147 (17) 0.0054 (19)
C25 0.086 (3) 0.085 (3) 0.076 (2) −0.008 (2) 0.024 (2) −0.015 (2)
C26 0.092 (3) 0.113 (3) 0.054 (2) −0.027 (2) 0.0099 (19) 0.003 (2)
C27 0.0440 (15) 0.0468 (17) 0.0491 (18) −0.0076 (14) 0.0019 (14) −0.0021 (15)
C28 0.0618 (19) 0.056 (2) 0.063 (2) 0.0039 (16) 0.0020 (16) −0.0065 (17)
C29 0.082 (2) 0.071 (2) 0.069 (2) 0.0066 (19) 0.006 (2) −0.023 (2)
C30 0.066 (2) 0.084 (3) 0.053 (2) −0.0101 (19) 0.0008 (17) −0.013 (2)
C31 0.0452 (16) 0.059 (2) 0.0519 (19) −0.0063 (15) 0.0033 (14) 0.0022 (17)
C32 0.0483 (16) 0.0521 (18) 0.0513 (19) −0.0059 (14) 0.0013 (14) −0.0077 (15)
C33 0.0386 (14) 0.0460 (17) 0.0453 (17) −0.0038 (13) 0.0017 (13) 0.0016 (14)
C34 0.066 (2) 0.062 (2) 0.059 (2) −0.0022 (16) 0.0184 (17) 0.0022 (18)
C35 0.092 (3) 0.093 (3) 0.056 (2) −0.019 (2) 0.017 (2) 0.013 (2)
C36 0.075 (2) 0.080 (3) 0.070 (3) −0.020 (2) −0.012 (2) 0.031 (2)
C37 0.058 (2) 0.056 (2) 0.096 (3) 0.0022 (16) −0.007 (2) 0.016 (2)
C38 0.0510 (17) 0.0523 (19) 0.060 (2) 0.0010 (15) 0.0058 (15) 0.0003 (17)
N3 0.0404 (12) 0.0415 (13) 0.0435 (14) −0.0048 (10) 0.0007 (11) 0.0036 (11)
N4 0.0548 (16) 0.080 (2) 0.0546 (19) −0.0085 (16) 0.0048 (14) 0.0122 (17)
O4 0.0749 (15) 0.117 (2) 0.0558 (15) −0.0125 (14) −0.0133 (13) 0.0113 (14)
O5 0.1009 (19) 0.0781 (18) 0.0858 (19) 0.0195 (15) −0.0034 (15) 0.0073 (15)
O6 0.0462 (11) 0.0529 (12) 0.0628 (13) −0.0086 (10) −0.0012 (10) 0.0042 (10)
S2 0.0479 (4) 0.0946 (7) 0.0624 (6) −0.0072 (4) 0.0112 (4) −0.0025 (5)

6-(3-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (1). Geometric parameters (Å, º)

C1—H1 0.9800 C20—H20 0.9800
C1—C8 1.517 (4) C20—C27 1.507 (4)
C1—N1 1.476 (3) C20—N3 1.474 (3)
C1—S1 1.817 (3) C20—S2 1.821 (3)
C2—C3 1.510 (4) C21—C22 1.508 (4)
C2—N1 1.375 (3) C21—N3 1.364 (3)
C2—O3 1.223 (3) C21—O6 1.228 (3)
C3—H3A 0.9700 C22—H22A 0.9700
C3—H3B 0.9700 C22—H22B 0.9700
C3—C4 1.512 (4) C22—C23 1.512 (4)
C4—C5 1.502 (4) C23—C24 1.505 (4)
C4—C6 1.491 (4) C23—C25 1.499 (4)
C4—C7 1.505 (4) C23—C26 1.510 (4)
C5—H5A 0.9700 C24—H24A 0.9700
C5—H5B 0.9700 C24—H24B 0.9700
C5—S1 1.801 (3) C24—S2 1.814 (3)
C6—H6A 0.9700 C25—H25A 0.9700
C6—H6B 0.9700 C25—H25B 0.9700
C6—C7 1.492 (4) C25—C26 1.498 (5)
C7—H7A 0.9700 C26—H26A 0.9700
C7—H7B 0.9700 C26—H26B 0.9700
C8—C9 1.393 (4) C27—C28 1.384 (4)
C8—C13 1.384 (4) C27—C32 1.385 (4)
C9—H9 0.9300 C28—H28 0.9300
C9—C10 1.382 (4) C28—C29 1.381 (4)
C10—H10 0.9300 C29—H29 0.9300
C10—C11 1.376 (4) C29—C30 1.370 (4)
C11—H11 0.9300 C30—H30 0.9300
C11—C12 1.375 (4) C30—C31 1.369 (4)
C12—C13 1.380 (4) C31—C32 1.376 (4)
C12—N2 1.468 (4) C31—N4 1.472 (4)
C13—H13 0.9300 C32—H32 0.9300
C14—C15 1.376 (4) C33—C34 1.371 (4)
C14—C19 1.379 (4) C33—C38 1.381 (4)
C14—N1 1.444 (3) C33—N3 1.446 (3)
C15—H15 0.9300 C34—H34 0.9300
C15—C16 1.375 (4) C34—C35 1.387 (4)
C16—H16 0.9300 C35—H35 0.9300
C16—C17 1.374 (4) C35—C36 1.372 (5)
C17—H17 0.9300 C36—H36 0.9300
C17—C18 1.367 (4) C36—C37 1.360 (5)
C18—H18 0.9300 C37—H37 0.9300
C18—C19 1.370 (4) C37—C38 1.383 (4)
C19—H19 0.9300 C38—H38 0.9300
N2—O1 1.217 (3) N4—O4 1.226 (3)
N2—O2 1.221 (3) N4—O5 1.216 (3)
C8—C1—H1 107.9 C27—C20—H20 107.1
C8—C1—S1 109.56 (18) C27—C20—S2 110.86 (18)
N1—C1—H1 107.9 N3—C20—H20 107.1
N1—C1—C8 110.9 (2) N3—C20—C27 111.6 (2)
N1—C1—S1 112.55 (18) N3—C20—S2 112.84 (18)
S1—C1—H1 107.9 S2—C20—H20 107.1
N1—C2—C3 118.1 (2) N3—C21—C22 118.5 (2)
O3—C2—C3 121.2 (3) O6—C21—C22 120.9 (2)
O3—C2—N1 120.7 (3) O6—C21—N3 120.6 (2)
C2—C3—H3A 108.9 C21—C22—H22A 108.7
C2—C3—H3B 108.9 C21—C22—H22B 108.7
C2—C3—C4 113.2 (2) C21—C22—C23 114.1 (2)
H3A—C3—H3B 107.7 H22A—C22—H22B 107.6
C4—C3—H3A 108.9 C23—C22—H22A 108.7
C4—C3—H3B 108.9 C23—C22—H22B 108.7
C5—C4—C3 116.4 (2) C22—C23—C26 117.1 (3)
C6—C4—C3 117.8 (3) C24—C23—C22 117.1 (3)
C6—C4—C5 118.5 (3) C24—C23—C26 115.0 (3)
C6—C4—C7 59.7 (2) C25—C23—C22 117.5 (3)
C7—C4—C3 117.0 (3) C25—C23—C24 117.9 (3)
C7—C4—C5 115.2 (3) C25—C23—C26 59.7 (2)
C4—C5—H5A 108.1 C23—C24—H24A 108.3
C4—C5—H5B 108.1 C23—C24—H24B 108.3
C4—C5—S1 116.8 (2) C23—C24—S2 116.0 (2)
H5A—C5—H5B 107.3 H24A—C24—H24B 107.4
S1—C5—H5A 108.1 S2—C24—H24A 108.3
S1—C5—H5B 108.1 S2—C24—H24B 108.3
C4—C6—H6A 117.7 C23—C25—H25A 117.7
C4—C6—H6B 117.7 C23—C25—H25B 117.7
C4—C6—C7 60.6 (2) H25A—C25—H25B 114.8
H6A—C6—H6B 114.8 C26—C25—C23 60.5 (2)
C7—C6—H6A 117.7 C26—C25—H25A 117.7
C7—C6—H6B 117.7 C26—C25—H25B 117.7
C4—C7—H7A 117.8 C23—C26—H26A 117.8
C4—C7—H7B 117.8 C23—C26—H26B 117.8
C6—C7—C4 59.7 (2) C25—C26—C23 59.8 (2)
C6—C7—H7A 117.8 C25—C26—H26A 117.8
C6—C7—H7B 117.8 C25—C26—H26B 117.8
H7A—C7—H7B 114.9 H26A—C26—H26B 114.9
C9—C8—C1 122.0 (3) C28—C27—C20 119.0 (3)
C13—C8—C1 119.5 (2) C28—C27—C32 119.0 (3)
C13—C8—C9 118.4 (3) C32—C27—C20 122.0 (3)
C8—C9—H9 119.3 C27—C28—H28 119.8
C10—C9—C8 121.4 (3) C29—C28—C27 120.4 (3)
C10—C9—H9 119.3 C29—C28—H28 119.8
C9—C10—H10 120.0 C28—C29—H29 119.5
C11—C10—C9 120.0 (3) C30—C29—C28 121.0 (3)
C11—C10—H10 120.0 C30—C29—H29 119.5
C10—C11—H11 120.8 C29—C30—H30 121.0
C10—C11—C12 118.4 (3) C29—C30—C31 118.0 (3)
C12—C11—H11 120.8 C31—C30—H30 121.0
C11—C12—C13 122.6 (3) C30—C31—C32 122.7 (3)
C11—C12—N2 118.3 (3) C30—C31—N4 119.2 (3)
C13—C12—N2 119.1 (3) C32—C31—N4 118.2 (3)
C8—C13—H13 120.4 C27—C32—H32 120.5
C12—C13—C8 119.2 (3) C31—C32—C27 119.0 (3)
C12—C13—H13 120.4 C31—C32—H32 120.5
C15—C14—C19 119.8 (3) C34—C33—C38 119.9 (3)
C15—C14—N1 119.3 (2) C34—C33—N3 120.2 (3)
C19—C14—N1 120.8 (3) C38—C33—N3 119.9 (3)
C14—C15—H15 120.0 C33—C34—H34 119.9
C16—C15—C14 120.1 (3) C33—C34—C35 120.2 (3)
C16—C15—H15 120.0 C35—C34—H34 119.9
C15—C16—H16 120.0 C34—C35—H35 120.3
C17—C16—C15 120.0 (3) C36—C35—C34 119.5 (3)
C17—C16—H16 120.0 C36—C35—H35 120.3
C16—C17—H17 120.2 C35—C36—H36 119.8
C18—C17—C16 119.6 (3) C37—C36—C35 120.5 (3)
C18—C17—H17 120.2 C37—C36—H36 119.8
C17—C18—H18 119.5 C36—C37—H37 119.7
C17—C18—C19 120.9 (3) C36—C37—C38 120.5 (3)
C19—C18—H18 119.5 C38—C37—H37 119.7
C14—C19—H19 120.2 C33—C38—C37 119.4 (3)
C18—C19—C14 119.5 (3) C33—C38—H38 120.3
C18—C19—H19 120.2 C37—C38—H38 120.3
C2—N1—C1 122.0 (2) C21—N3—C20 122.3 (2)
C2—N1—C14 117.2 (2) C21—N3—C33 117.8 (2)
C14—N1—C1 119.3 (2) C33—N3—C20 118.8 (2)
O1—N2—C12 118.7 (3) O4—N4—C31 118.1 (3)
O1—N2—O2 123.4 (3) O5—N4—C31 118.9 (3)
O2—N2—C12 117.8 (3) O5—N4—O4 123.0 (3)
C5—S1—C1 99.49 (14) C24—S2—C20 97.13 (14)
C1—C8—C9—C10 179.8 (3) C20—C27—C28—C29 178.3 (3)
C1—C8—C13—C12 −179.3 (2) C20—C27—C32—C31 −177.4 (2)
C2—C3—C4—C5 84.2 (3) C21—C22—C23—C24 −84.2 (3)
C2—C3—C4—C6 −65.5 (3) C21—C22—C23—C25 65.0 (3)
C2—C3—C4—C7 −133.7 (3) C21—C22—C23—C26 133.1 (3)
C3—C2—N1—C1 7.6 (4) C22—C21—N3—C20 −1.7 (4)
C3—C2—N1—C14 173.2 (2) C22—C21—N3—C33 −169.5 (2)
C3—C4—C5—S1 −63.3 (3) C22—C23—C24—S2 66.5 (3)
C3—C4—C6—C7 −106.7 (3) C22—C23—C25—C26 106.9 (3)
C3—C4—C7—C6 107.9 (3) C22—C23—C26—C25 −107.6 (3)
C4—C5—S1—C1 59.6 (3) C23—C24—S2—C20 −60.9 (3)
C5—C4—C6—C7 104.2 (3) C24—C23—C25—C26 −104.1 (3)
C5—C4—C7—C6 −109.6 (3) C24—C23—C26—C25 109.0 (3)
C6—C4—C5—S1 86.2 (3) C25—C23—C24—S2 −82.6 (3)
C7—C4—C5—S1 154.0 (2) C26—C23—C24—S2 −150.1 (3)
C8—C1—N1—C2 −166.4 (2) C27—C20—N3—C21 159.1 (2)
C8—C1—N1—C14 28.2 (3) C27—C20—N3—C33 −33.2 (3)
C8—C1—S1—C5 153.1 (2) C27—C20—S2—C24 −149.8 (2)
C8—C9—C10—C11 −0.7 (4) C27—C28—C29—C30 −0.8 (5)
C9—C8—C13—C12 −0.6 (4) C28—C27—C32—C31 1.2 (4)
C9—C10—C11—C12 −0.3 (4) C28—C29—C30—C31 1.1 (5)
C10—C11—C12—C13 0.8 (4) C29—C30—C31—C32 −0.2 (5)
C10—C11—C12—N2 −178.0 (2) C29—C30—C31—N4 179.9 (3)
C11—C12—C13—C8 −0.4 (4) C30—C31—C32—C27 −0.9 (4)
C11—C12—N2—O1 −6.4 (4) C30—C31—N4—O4 −15.7 (4)
C11—C12—N2—O2 172.9 (3) C30—C31—N4—O5 165.6 (3)
C13—C8—C9—C10 1.1 (4) C32—C27—C28—C29 −0.4 (4)
C13—C12—N2—O1 174.8 (3) C32—C31—N4—O4 164.4 (3)
C13—C12—N2—O2 −5.9 (4) C32—C31—N4—O5 −14.4 (4)
C14—C15—C16—C17 0.0 (5) C33—C34—C35—C36 −1.3 (5)
C15—C14—C19—C18 0.4 (4) C34—C33—C38—C37 −0.2 (4)
C15—C14—N1—C1 −91.8 (3) C34—C33—N3—C20 91.3 (3)
C15—C14—N1—C2 102.2 (3) C34—C33—N3—C21 −100.4 (3)
C15—C16—C17—C18 0.3 (5) C34—C35—C36—C37 0.2 (5)
C16—C17—C18—C19 −0.3 (5) C35—C36—C37—C38 0.8 (5)
C17—C18—C19—C14 0.0 (5) C36—C37—C38—C33 −0.9 (4)
C19—C14—C15—C16 −0.3 (4) C38—C33—C34—C35 1.2 (4)
C19—C14—N1—C1 86.9 (3) C38—C33—N3—C20 −86.4 (3)
C19—C14—N1—C2 −79.1 (3) C38—C33—N3—C21 81.9 (3)
N1—C1—C8—C9 −87.2 (3) N3—C20—C27—C28 −99.3 (3)
N1—C1—C8—C13 91.4 (3) N3—C20—C27—C32 79.3 (3)
N1—C1—S1—C5 −83.0 (2) N3—C20—S2—C24 84.2 (2)
N1—C2—C3—C4 −77.3 (3) N3—C21—C22—C23 71.4 (3)
N1—C14—C15—C16 178.3 (3) N3—C33—C34—C35 −176.5 (3)
N1—C14—C19—C18 −178.3 (3) N3—C33—C38—C37 177.5 (2)
N2—C12—C13—C8 178.4 (2) N4—C31—C32—C27 179.0 (2)
O3—C2—C3—C4 101.7 (3) O6—C21—C22—C23 −106.5 (3)
O3—C2—N1—C1 −171.4 (2) O6—C21—N3—C20 176.2 (2)
O3—C2—N1—C14 −5.8 (4) O6—C21—N3—C33 8.4 (4)
S1—C1—C8—C9 37.6 (3) S2—C20—C27—C28 134.0 (2)
S1—C1—C8—C13 −143.7 (2) S2—C20—C27—C32 −47.4 (3)
S1—C1—N1—C2 70.4 (3) S2—C20—N3—C21 −75.3 (3)
S1—C1—N1—C14 −94.9 (2) S2—C20—N3—C33 92.4 (2)

6-(3-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (1). Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C1—H1···O6 0.98 2.41 3.390 (3) 175
C3—H3B···O6 0.97 2.50 3.469 (3) 174
C10—H10···O6i 0.93 2.60 3.408 (3) 146
C17—H17···O2ii 0.93 2.46 3.216 (4) 138
C20—H20···O3iii 0.98 2.41 3.369 (3) 165
C28—H28···O3iii 0.93 2.56 3.384 (4) 147

Symmetry codes: (i) −x+1/2, y−1/2, −z+1/2; (ii) x, y−1, z; (iii) x, y+1, z.

6-(4-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (2). Crystal data

C19H18N2O3S Dx = 1.332 Mg m3
Mr = 354.41 Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pca21 Cell parameters from 3246 reflections
a = 17.478 (3) Å θ = 2.3–28.2°
b = 10.4125 (19) Å µ = 0.20 mm1
c = 9.7129 (17) Å T = 298 K
V = 1767.6 (5) Å3 Needle, colorless
Z = 4 0.27 × 0.1 × 0.04 mm
F(000) = 744

6-(4-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (2). Data collection

Bruker SMART CCD area detector diffractometer 4261 independent reflections
Radiation source: fine-focus sealed tube 2403 reflections with I > 2σ(I)
Parallel graphite monochromator Rint = 0.056
Detector resolution: 8.34 pixels mm-1 θmax = 28.3°, θmin = 2.0°
phi and ω scans h = −23→20
Absorption correction: multi-scan (SADABS; Bruker, 2001) k = −13→13
Tmin = 0.769, Tmax = 0.9 l = −12→12
15240 measured reflections

6-(4-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (2). Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.081 H-atom parameters constrained
wR(F2) = 0.249 w = 1/[σ2(Fo2) + (0.1501P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01 (Δ/σ)max < 0.001
4261 reflections Δρmax = 0.55 e Å3
226 parameters Δρmin = −0.30 e Å3
1 restraint Absolute structure: Flack (1983)
Primary atom site location: structure-invariant direct methods Absolute structure parameter: 0.47 (19)

6-(4-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (2). Special details

Experimental. The data collection nominally covered a full sphere of reciprocal space by a combination of 4 sets of ω scans each set at different φ and/or 2θ angles and each scan (20 s exposure) covering -0.300° degrees in ω. The crystal to detector distance was 5.82 cm.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

6-(4-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (2). Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.6266 (3) 0.5630 (4) 0.3841 (4) 0.0635 (11)
H1 0.6481 0.5871 0.4736 0.076*
C2 0.7512 (2) 0.6299 (3) 0.2850 (5) 0.0559 (9)
C3 0.7521 (3) 0.7400 (4) 0.3845 (4) 0.0593 (9)
H3A 0.8027 0.7785 0.3838 0.071*
H3B 0.7429 0.7071 0.4764 0.071*
C4 0.6941 (3) 0.8423 (4) 0.3537 (5) 0.0684 (12)
C5 0.6136 (3) 0.8248 (5) 0.4002 (8) 0.0895 (16)
H5A 0.5854 0.9020 0.3769 0.107*
H5B 0.6138 0.8180 0.4998 0.107*
C6 0.5840 (3) 0.4389 (4) 0.4049 (5) 0.0677 (11)
C7 0.6041 (3) 0.3639 (5) 0.5202 (6) 0.0840 (15)
H7 0.6424 0.3920 0.5794 0.101*
C8 0.5672 (4) 0.2488 (6) 0.5459 (8) 0.0912 (16)
H8 0.5794 0.1990 0.6223 0.109*
C9 0.5123 (3) 0.2113 (5) 0.4549 (7) 0.0836 (15)
C10 0.4898 (3) 0.2793 (6) 0.3448 (8) 0.0952 (18)
H10 0.4516 0.2491 0.2864 0.114*
C11 0.5263 (3) 0.3988 (5) 0.3204 (7) 0.0794 (13)
H11 0.5109 0.4499 0.2469 0.095*
C12 0.6820 (2) 0.4565 (4) 0.1787 (4) 0.0550 (9)
C13 0.7041 (3) 0.3314 (4) 0.1968 (6) 0.0697 (11)
H13 0.7288 0.3067 0.2773 0.084*
C14 0.6893 (3) 0.2408 (5) 0.0934 (6) 0.0780 (14)
H14 0.7037 0.1555 0.1050 0.094*
C15 0.6533 (3) 0.2795 (5) −0.0250 (6) 0.0763 (13)
H15 0.6425 0.2196 −0.0933 0.092*
C16 0.6336 (3) 0.4032 (5) −0.0435 (5) 0.0734 (12)
H16 0.6105 0.4283 −0.1254 0.088*
C17 0.6473 (3) 0.4935 (5) 0.0581 (5) 0.0646 (10)
H17 0.6332 0.5787 0.0448 0.078*
C18 0.7205 (4) 0.9800 (4) 0.3554 (6) 0.0846 (15)
H18A 0.7735 0.9967 0.3789 0.102*
H18B 0.6845 1.0446 0.3871 0.102*
C19 0.7041 (4) 0.9149 (4) 0.2180 (5) 0.0822 (15)
H19A 0.7474 0.8924 0.1603 0.099*
H19B 0.6584 0.9404 0.1685 0.099*
N1 0.69179 (18) 0.5453 (3) 0.2889 (3) 0.0568 (8)
N2 0.4715 (4) 0.0877 (6) 0.4819 (10) 0.120 (2)
O1 0.80230 (16) 0.6180 (3) 0.1992 (3) 0.0659 (7)
O2 0.4223 (4) 0.0545 (6) 0.3992 (11) 0.169 (3)
O3 0.4905 (4) 0.0269 (6) 0.5872 (9) 0.151 (3)
S1 0.56211 (7) 0.69074 (13) 0.3337 (2) 0.0942 (5)

6-(4-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (2). Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.058 (2) 0.080 (3) 0.053 (2) −0.0090 (19) 0.0124 (18) −0.0078 (19)
C2 0.052 (2) 0.061 (2) 0.055 (2) −0.0039 (17) −0.0023 (19) −0.0011 (18)
C3 0.064 (2) 0.063 (2) 0.050 (2) −0.0029 (18) −0.0001 (19) −0.0036 (18)
C4 0.084 (3) 0.055 (2) 0.067 (3) 0.0001 (18) −0.003 (2) −0.005 (2)
C5 0.075 (3) 0.077 (3) 0.116 (4) 0.012 (2) 0.023 (3) −0.008 (3)
C6 0.052 (2) 0.075 (3) 0.076 (3) −0.0025 (19) 0.011 (2) −0.002 (2)
C7 0.077 (3) 0.094 (4) 0.081 (4) 0.002 (3) 0.015 (3) 0.005 (3)
C8 0.086 (4) 0.091 (4) 0.096 (4) 0.007 (3) 0.017 (3) 0.010 (3)
C9 0.076 (3) 0.077 (3) 0.098 (4) 0.000 (2) 0.033 (3) −0.005 (3)
C10 0.054 (3) 0.110 (4) 0.122 (5) −0.014 (2) 0.015 (3) −0.017 (4)
C11 0.059 (3) 0.088 (3) 0.091 (3) −0.012 (2) 0.005 (3) 0.000 (3)
C12 0.053 (2) 0.064 (2) 0.049 (2) −0.0016 (15) −0.0009 (17) −0.0045 (18)
C13 0.076 (3) 0.066 (2) 0.068 (3) 0.004 (2) −0.007 (2) 0.004 (2)
C14 0.100 (4) 0.060 (3) 0.074 (3) 0.000 (2) −0.001 (3) −0.008 (2)
C15 0.079 (3) 0.077 (3) 0.073 (3) −0.014 (2) 0.004 (3) −0.015 (2)
C16 0.071 (3) 0.093 (3) 0.055 (2) −0.015 (2) −0.006 (2) −0.006 (2)
C17 0.068 (3) 0.070 (3) 0.057 (2) −0.006 (2) −0.009 (2) 0.000 (2)
C18 0.099 (4) 0.061 (3) 0.095 (4) −0.003 (2) −0.014 (3) −0.013 (3)
C19 0.112 (4) 0.074 (3) 0.060 (3) −0.003 (3) −0.020 (3) 0.005 (2)
N1 0.0504 (18) 0.072 (2) 0.0480 (18) −0.0073 (13) 0.0019 (15) −0.0070 (15)
N2 0.075 (3) 0.086 (3) 0.200 (7) 0.002 (3) 0.055 (4) 0.010 (5)
O1 0.0552 (16) 0.0804 (17) 0.0621 (18) −0.0054 (13) 0.0086 (15) −0.0031 (15)
O2 0.107 (4) 0.113 (4) 0.288 (10) −0.043 (3) 0.024 (5) −0.013 (5)
O3 0.148 (5) 0.105 (4) 0.201 (7) −0.004 (3) 0.043 (5) 0.037 (4)
S1 0.0546 (6) 0.0848 (8) 0.1432 (14) 0.0082 (5) −0.0026 (8) −0.0113 (9)

6-(4-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (2). Geometric parameters (Å, º)

C1—H1 0.9800 C9—N2 1.494 (8)
C1—C6 1.505 (6) C10—H10 0.9300
C1—N1 1.479 (5) C10—C11 1.418 (8)
C1—S1 1.811 (5) C11—H11 0.9300
C2—C3 1.500 (5) C12—C13 1.370 (6)
C2—N1 1.361 (5) C12—C17 1.373 (6)
C2—O1 1.228 (5) C12—N1 1.425 (5)
C3—H3A 0.9700 C13—H13 0.9300
C3—H3B 0.9700 C13—C14 1.402 (7)
C3—C4 1.501 (6) C14—H14 0.9300
C4—C5 1.488 (7) C14—C15 1.371 (8)
C4—C18 1.506 (7) C15—H15 0.9300
C4—C19 1.530 (7) C15—C16 1.345 (8)
C5—H5A 0.9700 C16—H16 0.9300
C5—H5B 0.9700 C16—C17 1.384 (7)
C5—S1 1.782 (6) C17—H17 0.9300
C6—C7 1.409 (8) C18—H18A 0.9700
C6—C11 1.366 (7) C18—H18B 0.9700
C7—H7 0.9300 C18—C19 1.524 (7)
C7—C8 1.384 (8) C19—H19A 0.9700
C8—H8 0.9300 C19—H19B 0.9700
C8—C9 1.362 (9) N2—O2 1.226 (11)
C9—C10 1.342 (9) N2—O3 1.248 (10)
C6—C1—H1 106.9 C11—C10—H10 121.1
C6—C1—S1 111.0 (3) C6—C11—C10 120.0 (6)
N1—C1—H1 106.9 C6—C11—H11 120.0
N1—C1—C6 111.0 (3) C10—C11—H11 120.0
N1—C1—S1 113.7 (3) C13—C12—C17 120.0 (4)
S1—C1—H1 106.9 C13—C12—N1 119.1 (4)
N1—C2—C3 119.0 (4) C17—C12—N1 120.8 (4)
O1—C2—C3 120.4 (4) C12—C13—H13 120.1
O1—C2—N1 120.6 (3) C12—C13—C14 119.8 (5)
C2—C3—H3A 108.8 C14—C13—H13 120.1
C2—C3—H3B 108.8 C13—C14—H14 120.4
C2—C3—C4 114.0 (4) C15—C14—C13 119.1 (5)
H3A—C3—H3B 107.6 C15—C14—H14 120.4
C4—C3—H3A 108.8 C14—C15—H15 119.6
C4—C3—H3B 108.8 C16—C15—C14 120.7 (5)
C3—C4—C18 117.8 (4) C16—C15—H15 119.6
C3—C4—C19 116.4 (4) C15—C16—H16 119.6
C5—C4—C3 119.4 (4) C15—C16—C17 120.7 (5)
C5—C4—C18 113.8 (4) C17—C16—H16 119.6
C5—C4—C19 115.5 (5) C12—C17—C16 119.6 (4)
C18—C4—C19 60.2 (3) C12—C17—H17 120.2
C4—C5—H5A 107.9 C16—C17—H17 120.2
C4—C5—H5B 107.9 C4—C18—H18A 117.7
C4—C5—S1 117.6 (4) C4—C18—H18B 117.7
H5A—C5—H5B 107.2 C4—C18—C19 60.6 (3)
S1—C5—H5A 107.9 H18A—C18—H18B 114.8
S1—C5—H5B 107.9 C19—C18—H18A 117.7
C7—C6—C1 117.3 (5) C19—C18—H18B 117.7
C11—C6—C1 123.2 (5) C4—C19—H19A 117.9
C11—C6—C7 119.5 (5) C4—C19—H19B 117.9
C6—C7—H7 119.8 C18—C19—C4 59.1 (3)
C8—C7—C6 120.5 (6) C18—C19—H19A 117.9
C8—C7—H7 119.8 C18—C19—H19B 117.9
C7—C8—H8 121.3 H19A—C19—H19B 115.0
C9—C8—C7 117.4 (6) C2—N1—C1 121.6 (3)
C9—C8—H8 121.3 C2—N1—C12 119.4 (3)
C8—C9—N2 118.0 (7) C12—N1—C1 117.3 (3)
C10—C9—C8 124.9 (6) O2—N2—C9 117.5 (8)
C10—C9—N2 117.1 (7) O2—N2—O3 125.6 (7)
C9—C10—H10 121.1 O3—N2—C9 116.9 (8)
C9—C10—C11 117.7 (6) C5—S1—C1 99.4 (2)
C1—C6—C7—C8 179.8 (5) C12—C13—C14—C15 0.6 (8)
C1—C6—C11—C10 178.7 (5) C13—C12—C17—C16 1.3 (7)
C2—C3—C4—C5 82.2 (6) C13—C12—N1—C1 −92.4 (5)
C2—C3—C4—C18 −132.8 (4) C13—C12—N1—C2 102.5 (5)
C2—C3—C4—C19 −64.1 (5) C13—C14—C15—C16 1.2 (9)
C3—C2—N1—C1 3.0 (6) C14—C15—C16—C17 −1.7 (8)
C3—C2—N1—C12 167.4 (4) C15—C16—C17—C12 0.5 (7)
C3—C4—C5—S1 −61.4 (7) C17—C12—C13—C14 −1.8 (7)
C3—C4—C18—C19 106.1 (5) C17—C12—N1—C1 84.3 (5)
C3—C4—C19—C18 −108.4 (5) C17—C12—N1—C2 −80.7 (5)
C4—C5—S1—C1 55.8 (5) C18—C4—C5—S1 152.2 (4)
C5—C4—C18—C19 −106.9 (5) C19—C4—C5—S1 85.2 (5)
C5—C4—C19—C18 104.0 (5) N1—C1—C6—C7 95.0 (5)
C6—C1—N1—C2 −160.3 (4) N1—C1—C6—C11 −87.0 (6)
C6—C1—N1—C12 35.0 (5) N1—C1—S1—C5 −81.7 (4)
C6—C1—S1—C5 152.3 (4) N1—C2—C3—C4 −71.9 (5)
C6—C7—C8—C9 0.9 (8) N1—C12—C13—C14 175.0 (4)
C7—C6—C11—C10 −3.3 (8) N1—C12—C17—C16 −175.4 (4)
C7—C8—C9—C10 −2.1 (9) N2—C9—C10—C11 178.0 (5)
C7—C8—C9—N2 −179.5 (5) O1—C2—C3—C4 106.4 (5)
C8—C9—C10—C11 0.5 (8) O1—C2—N1—C1 −175.3 (4)
C8—C9—N2—O2 −179.8 (6) O1—C2—N1—C12 −10.9 (6)
C8—C9—N2—O3 0.2 (8) S1—C1—C6—C7 −137.6 (4)
C9—C10—C11—C6 2.3 (8) S1—C1—C6—C11 40.5 (6)
C10—C9—N2—O2 2.5 (8) S1—C1—N1—C2 73.7 (4)
C10—C9—N2—O3 −177.4 (6) S1—C1—N1—C12 −91.0 (4)
C11—C6—C7—C8 1.7 (8)

6-(4-Nitrophenyl)-7-phenyl-5-thia-7-azaspiro[2.6]nonan-8-one (2). Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C1—H1···O1i 0.98 2.38 3.352 (6) 173
C3—H3B···O1i 0.97 2.48 3.444 (5) 171

Symmetry code: (i) −x+3/2, y, z+1/2.

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) 1, 2. DOI: 10.1107/S2056989019010429/hb7839sup1.cif

e-75-01270-sup1.cif (47.3KB, cif)

Structure factors: contains datablock(s) 1. DOI: 10.1107/S2056989019010429/hb78391sup2.hkl

e-75-01270-1sup2.hkl (415.6KB, hkl)

Supporting information file. DOI: 10.1107/S2056989019010429/hb78391sup5.mol

Structure factors: contains datablock(s) 2. DOI: 10.1107/S2056989019010429/hb78392sup4.hkl

e-75-01270-2sup4.hkl (208.8KB, hkl)

Supporting information file. DOI: 10.1107/S2056989019010429/hb78392sup6.mol

Supporting information file. DOI: 10.1107/S2056989019010429/hb78391sup6.cml

Supporting information file. DOI: 10.1107/S2056989019010429/hb78392sup7.cml

CCDC references: 1942358, 1942357

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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