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Ranking of Clustering Methods based on Number of Significant Pathways Enriched
| K-means | HC | PAM | LSTM-VAE | DCEC | |
|---|---|---|---|---|---|
| Increase | 5 | 4 | 2 | 3 | 1 |
| Decrease | 1 | 5 | 4 | 2 | 3 |
| Increase-Decrease | 5 | 2 | 4 | 3 | 1 |
| Decrease-Increase | 5 | 2 | 3 | 4 | 1 |
| Late Increase | 3 | 4.5 | 1 | 2 | 4.5 |
| Late Decrease | 4 | 5 | 3 | 2 | 1 |
| One-directional Change | 4.5 | 4.5 | 2 | 3 | 1 |
| Two-directional Change | 3 | 1 | 5 | 4 | 2 |
| Late Change | 3 | 4.5 | 4.5 | 2 | 1 |
| Average Rank | 3.72 | 3.61 | 3.16 | 2.77 | 1.72 |
