Table 1. Estimated posterior median fitness and 95% CI for the Ebola GP mutants relative to the Makona genotype.
Genotype | Sample freq | Base model | Model + geo effects | Effect in cell culture |
---|---|---|---|---|
Makona | 0.036 | 1.00 | 1.00 | Reference genotype |
A82V | 0.720 | 1.05 (1.04–1.07) | 1.26 (1.19–1.35) | Increases infectivity 2X |
P330S | 0.002 | 0.98 (0.82–1.14) | 1.11 (0.96–1.24) | Decreases infectivity |
P330S+N107D+G480D | 0.037 | 1.04 (0.98–1.12) | 1.27 (1.16–1.39) | Increases infectivity > 2X |
A82V+R410S | 0.044 | 1.09 (1.00–1.18) | 1.31 (1.17–1.45) | No or small effect |
A82V+R410S+K439E | 0.035 | 1.14 (1.01–1.26) | 1.36 (1.20–1.54) | Increases infectivity 2-3X |
A82V+R29K | 0.019 | 1.06 (0.93–1.19) | 1.27 (1.10–1.45) | Increases infectivity 2-3X |
A82V+T230A | 0.026 | 1.03 (0.93–1.11) | 1.23 (1.10–1.37) | Increases infectivity 2-3X |
A82V+I371V | 0.067 | 1.03 (0.98–1.09) | 1.24 (1.14–1.35) | Increases infectivity 2-3X |