Table 3. The partition schemes and best-fitting models selected of 12 protein-coding genes in 12P38 data.
Nucleotide sequence alignments | ||
---|---|---|
Subset | Subset partitions | Best model |
Partition 1 | atp6_pos1, cox2_pos1, cox3_pos1, cytb_pos1 | GTR + I + G |
Partition 2 | atp6_pos2, cox2_pos2, cox3_pos2, cytb_pos2, nd3_pos2 | TVM + I + G |
Partition 3 | atp8_pos1, atp8_pos2, nd6_pos2 | HKY + G |
Partition 4 | cox1 pos 1 | SYM + G |
Partition 5 | cox1_pos2 | F81 + G |
Partition 6 | nd1_pos1, nd4l_pos1, nd4_pos1, nd5 pos1 | GTR + I + G |
Partition 7 | nd1_pos2, nd4_pos2, nd4l_pos2, nd5_pos2, | GTR + I + G |
Partition 8 | nd3_pos1, nd6_pos1 | GTR + I + G |