Skip to main content
BMC Medical Genetics logoLink to BMC Medical Genetics
. 2019 Sep 12;20:157. doi: 10.1186/s12881-019-0880-1

Metastatic colorectal cancer and severe hypocalcemia following irinotecan administration in a patient with X-linked agammaglobulinemia: a case report

Mingming Li 1,#, Wei Chen 1,#, Xiaomeng Sun 2, Zhipeng Wang 1, Xun Zou 1, Hua Wei 1, Zhan Wang 3,, Wansheng Chen 1,
PMCID: PMC6739925  PMID: 31510946

Abstract

Background

X-linked agammaglobulinemia (XLA) is a primary immunodeficiency disorder caused by germline mutations in the Bruton tyrosine kinase (BTK) gene on X chromosome. These mutations disturb B-cell development, decrease immunoglobulin levels, increase susceptibility to infection or neoplasms, and increase the risk of developing colorectal cancer (CRC). For occasional cases of CRC have been reported in XLA patients, low levels of B lymphocytes and immunoglobulins induced by congenital immune disorder make them more susceptible to drug-related toxicities (DRT). Therefore, gene sequencing, therapeutic drug monitoring and any possible measurement to predict DRT should be considered before determining the course of chemotherapy for XLA patients with CRC.

Case presentation

In this study, we reported a 21-year-old male who developed metastatic CRC in the context of XLA. Since the whole exome sequencing and therapeutic drug monitoring did not reveal any predictive markers of DRT, we applied standard first-line chemotherapy to the patient. However, progressive disease occurred after the fifth treatment cycle. Therefore, the administration of oxaliplatin was changed to irinotecan as second-line therapy. After that, the patient firstly suffered from severe hypocalcemia and eventually died due to metastatic CRC after the eighth treatment cycle. The overall survival time was 7.5 months.

Conclusions

This study reported the first written record of a Chinese XLA patient with metastatic CRC and severe hypocalcemia. Whole exome sequencing and bioinformatic analysis indicated the somatic mutations in ABCA6, C6 and PAX3 genes might contribute to the early-onset and metastasis CRC. Besides, a number of germline mutations in genes related to calcium metabolism (CACNA2D4, CD36, etc.) and the administration of irinotecan were speculated to be the causes of severe hypocalcemia. We therefore suggested that in order to avoid severe DRT, clinicians should take genetic background and therapeutic drug monitoring into consideration while planning chemotherapy treatment for XLA patients with CRC.

Electronic supplementary material

The online version of this article (10.1186/s12881-019-0880-1) contains supplementary material, which is available to authorized users.

Keywords: X-linked agammaglobulinemia, Hypocalcemia, Whole exome sequencing, Therapeutic drug monitoring, And irinotecan

Background

X-linked agammaglobulinemia (XLA) is an X-linked inherited disease caused by genetic mutations in the Bruton tyrosine kinase (BTK) gene [1, 2], which suppress the development of mature B lymphocytes. The human BTK gene encompasses 37.5 kb containing 19 exons. BTKbase is an up-to-date database compiling 1796 entities showing 917 unique BTK mutations from 1749 individuals, two thirds of which are from unrelated families, while one third are believed to be sporadic cases [3]. These mutations are found throughout the entire BTK gene sequence. The incidence of XLA varies between 1/200,000 and 1/20,000,000 in Western countries, whereas it has not been calculated in China yet [4]. Based on estimation, there should be more than 1000 cumulative XLA cases below 14 years of age [5].

XLA patients are characterized by insufficient number of normal circulating B lymphocytes and immunoglobulins [6]. The concurrent hallmark symptoms and complications of XLA include lower respiratory tract infection (bronchitis/pneumonia), otitis media, persistent diarrhea and skin infections [7, 8]. XLA patients are also susceptible to certain types of cancer including colorectal cancer (CRC) [915]. According to the National Comprehensive Cancer Network (NCCN) guidelines for colon cancer and rectal cancer, 5-fluorouracil (5-FU)-based drugs are recommended and commonly used for first-line chemotherapy [16]. But patients receiving 5-FU-based chemotherapy, alone or in a combination regimen, may experience drug-related toxicities (DRT) involving hand-foot syndrome, leukopenia, neutropenia, thrombocytopenia, diarrhea, nausea and vomiting [17]. Severe DRT not only leads to an early termination of chemotherapy but also causes safety issues. With previous evidence of lymphopenia being an independent factor associated with first-line chemotherapy induced hematologic toxicities in CRC patients [18, 19], we assume that XLA patients, who are characterized by low levels of B lymphocytes and immunoglobulins, are more likely to develop DRTs when they are diagnosed with CRC and receive chemotherapy [11]. Therefore, gene sequencing, therapeutic drug monitoring and any possible measurement to predict DRT should be considered before making chemotherapy regimens for XLA patients with CRC.

Case presentation

Presenting concerns

A 21-year-old man with XLA was hospitalized for fecal occult blood, epigastric pain and bronchitis in 2016. The patient was not married. The timeline of hospitalization is shown in Fig. 1a.

Fig. 1.

Fig. 1

The timeline, diagnosis and progression focus. a The timeline of hospitalization: This patient was diagnosed with XLA at the age of 4. He suffered upper abdominal pain on Oct 2016, and was diagnosed with advanced colorectal cancer with liver metastasis by liver biopsy ((b), magnification, × 100) and PET-CT scan (c). Abdominal CT scans on Oct 21th 2016 (d) and Jan 9th 2017 (e) showed that the tumor was stabilized after the first two treatment cycles. However, abdominal CT scans on Mar 24th 2017 (f) and May 22th 2017 (g) showed metastatic tumor progressed. Blood calcium/potassium levels (h) and tumor load (i) were recorded throughout all treatment cycles. The dotted lines indicate the starting time of each chemotherapy treatment cycle. The dark dotted line indicates the sixth treatment cycle when oxaliplatin was replaced by irinotecan

Clinical findings

This patient was diagnosed with XLA when he was 4 years old. He had no family history of XLA. Regular intravenous immunoglobulin (IVIG) replacement therapy was applied since the diagnosis. The admission physical examination found no positive symptoms of XLA.

Diagnostic focus and assessment

Abdominal ultrasonography showed multiple hepatic parenchymal lesions, gallbladder stones, splenomegaly and a hypoechoic mass in the right lower abdomen. Colonoscopy showed a cauliflower-like mass in the ascending colon. Needle biopsy of focal liver lesions (Fig. 1b) and PET-CT (Fig. 1c) suggested metastatic adenocarcinoma. The Eastern Cooperative Oncology Group (ECOG) Performance Status was one [20].

Whole exome sequencing (WES) was conducted using blood and liver tumor tissue. It revealed 10 somatic (Table 1) and 200 germline SNVs, including one on the BTK gene (c.340_347del, p.F114delX115) (Additional file 2: Figure S1). Somatic mutation was absent in KRAS, NRAS, BRAF, or PIK3CA. There is also no mutation in genes related to efficacy or safety of 5-FU-based drugs (Additional file 3: Table S1).

Table 1.

Somatic variants may initiate tumor development

SNP ID Gene Chrs Gene Region Function Cancer-promoting gene Diseases
rs188382333 ABCA6 17 exonic nonsynonymous SNV Y Colorectal cancer, acute myeloid Leukemia
rs201064036 C6 5 exonic nonsynonymous SNV Y C6 deficiency
rs79930314 CCDC144NL 17 exonic Stop gain N Colorectal cancer; Renal cancer
rs41291550 CYP2C18 10 exonic Stop gain N NA
rs1799931 NAT2 8 exonic nonsynonymous SNV N Slow acetylation
rs192410865 NOX3 6 exonic Stop gain N NA
NM_000438:exon2:c.232G>A:p.V78M PAX3 2 exonic nonsynonymous SNV Y Alveolar rhabdomyosarcomas, type1 and type3 Waardenburg syndrome
rs138133378 SCN7A 2 exonic nonsynonymous SNV N NA
rs117153533 TC2N 14 exonic nonsynonymous SNV N Colorectal cancer,
rs201277886 TOX 8 exonic nonsynonymous SNV N Colorectal cancer, virus-associated hepatocellular cancer, gastric cancer, esophageal cancer

Each SNP was searched in the following databases to confirm its correlation with diseases and whether it belongs to a cancer-promoting gene: ClinVar, ICGC, COSMIC, HGMD and OMIM

Therapeutic focus and assessment

Standard first-line chemotherapy was started on Nov. 18th, 2016. The regimen is as follows: 130 mg/m2 oxaliplatin iv on day 1, 1000 mg/m2 capecitabine (Cap) twice po daily for 14 days, which was repeated every 3 weeks, and 500 mg/m2 cetuximab iv over 2 h on day 1 every 2 weeks. The tumor was stabilized after the first two treatment cycles (Fig. 1d-e), and the abdominal pain ceased, the abdominal lump was reduced, and CA-199 (from 1410 to 157 U/ml) and CEA (from 113.6 to 20.1 μg/L) levels decreased. During the second treatment cycle, TDM on Cap and its metabolites was conducted. Compared to 10 other random CRC patients without XLA, the XLA patient showed delayed Cmax of Cap, lower doxifluridine (5′-DFUR) level and higher 5-FU level (Fig. 2). These results suggested that the XLA patient had a slower ability to absorb Cap and increased thymidine phosphorylase (TYMP) activity. Since both low 5′-DFUR levels and induced TYMP activity are negatively associated with Cap-related toxicity [21, 22] and this patient did not show any sign of DRT, the original chemotherapy plan was not adjusted.

Fig. 2.

Fig. 2

Therapeutic drug monitoring on Cap and its metabolites. a A simplified metabolic pathway of Cap. Metabolites and enzymes are indicated in black and red, respectively. Plasma concentrations of Cap (b) and its metabolites 5′-dFCR (c), 5′-dFUR (d), 5-FU (e), and FUH2 (f) were measured before and 1–4 h after the administration of Cap. The concentrations are presented as the mean ± SEM. Abbreviations: Cap, capecitabine; 5′-dFCR, 5′-deoxy-5-fluorocytidine; 5′-dFUR, doxifluridine; 5-FU, 5-fluorouracil; FUH2, 5-fluoro-5,6-dihydrouracil; CES, carboxylesterase; CDA, cytidine deaminase; TYMP, thymidine phosphorylase; and DPYD, dihydropyrimidine dehydrogenase

Follow-up and outcomes

After the fifth treatment, the metastatic tumor progressed (PFS 4.2 m) (Fig. 1f-g). The patient also experienced upper abdominal pain, an upper respiratory tract infection and a severe rash. From the sixth treatment, oxaliplatin was changed to irinotecan (180 mg/m2 iv over 30–90 min on day 1). After the sixth treatment cycle, hypocalcemia (mean, 5.8 mg/dL; range, 4.3–8.2 mg/dL; diagnostic lower limit, 14.0 mg/dL) and a tendency of hypokalemia (mean, 142.4 mEq/L; range, 118.6–161.1 mEq/L; diagnostic lower limit, 136.5 mEq/L) were observed (Fig. 1h). They were not relieved by intravenous calcium gluconate supplementation (1 g, twice daily).

Prior to the eighth treatment, a CT examination revealed an increase in total liver mass (Fig. 1i), which indicated PD (PFS 1.3 m). Unfortunately, the condition of the patient deteriorated with severe ascites and infection. Finally, best supportive care lasted for 1 month before he died (OS was 7.5 m).

Discussion and conclusions

Primary immunodeficiency caused by the BTK mutation is the main reason for XLA-associated diseases, which include recurrent bacterial infections, arthritis and types of cancer [23, 24]. In this study, the diagnosis of XLA was confirmed by WES, where a hemizygous pathogenic mutation (c.340_347del, p.F114delX115) of the BTK gene was found (Additional file 1). The 8 bp deletion of TTCTCCCC resulted in a frameshift mutation that affected general membrane targeting and the regulatory function of BTK [25]. Immunohistochemistry showed similar low expression of BTK in the tumor and tumor-adjacent tissue (Additional file 4: Figure S2).

It has been hypothesized that male XLA patients tend to have an early-onset CRC [11, 12]. B-cell deficiency is a risk factor for a narrow range of solid cancers, including CRC [26]. However, the correlation between CRC and XLA has not yet been statistically confirmed with a reasonable sample size. One study found colorectal adenomatous polyps from 2 out of 4 XLA patients in the Netherlands [27]. However, two other studies found that among 44 and 27 XLA patients from the United Kingdom and mainland China, respectively, none of the patients developed CRC [5, 28]. In the case studied in this report, the onset of CRC was more likely due to sporadic colorectal mutations. First, the XLA patient had no family history of immunodeficiency within 3 generations. Second, among the 10 somatic variants, the most convincing candidate CRC-driver mutations in ABCA6, C6, and PAX3 provided by the DriverDBv2 database are not functionally related [29]. C6 encodes for one of the membrane attack proteins, which plays a key role in the innate and adaptive immune responses by forming pores in the plasma membrane of target cells. It has been shown that dextran-sulfate-sodium (DSS) induced colitis was aggravated in C6-deficient mice with a series of enhanced production of pro-inflammatory mediators, including IL-1β, IL-6, CXCL-1, CCL-3, TGF-β1 and IL-17F, compared with wild-type mice [30]. In addition, exogenous C6 could ameliorate DSS-induced colitis in C6-deficient mice [30]. Since both colitis and enhanced inflammatory are risk factors of colorectal cancer, the deficiency of C6 may also participate in CRC development [31]. PAX3 encodes a transcription factor with an N-terminal DNA binding domain consisting of a paired box. It acts as a transcriptional regulator to activate or repress target genes of carcinogenesis [32, 33]. ABCA6 is a member of the ATP-binding cassette transporter family. It is ubiquitously expressed in the liver, heart and brain, contributing to drug resistance and tumor metastasis [34, 35]. In addition to these cancer-promoting mutations, the mutation (c.857G > A) of N-acetyltransferase 2 (NAT2) has been shown to be associated with slow acetylator phenotypes, which is normally correlated with the effectiveness of drugs and xenobiotic toxicity [36].

Because the incidence of CRC in China has increased rapidly over the past two decades [37, 38], and XLA patients are more prone to carcinogenesis. It is suggested to begin surveillance programs on XLA patients for CRC screening, especially for patients over the age of 20 and 30. As most XLA patients with gastric cancer or CRC have been found at these ages [23].

Regarding severe hypocalcemia, it is speculated to be a joint result of a number of germline mutations in genes related to calcium metabolism and the administration of irinotecan. First, based on the enrichment analysis of genes having germline mutations, the largest enriched group was calcium-related proteins (n = 48, p = 1.2E-7) (Additional file 5 and Additional file 6: Table S2). This group contains genes that bind at least one calcium atom or proteins whose function is calcium-dependent [3941]. Among them, 11 genes are directly involved in calcium metabolism and transportation (Table 2). Mutations in these genes may make the patient prone to abnormal calcium metabolism such as hypocalcemia. Second, the onset of hypocalcemia occurred immediately after the administration of irinotecan. Several studies have reported that hypocalcemia may be one of the rare DRTs of irinotecan (Table 3). Most of these cases had concurrent electrolyte abnormalities such as hypokalemia and hypomagnesemia. Consistently, the patient in this study also showed a trend of hypokalemia (Fig. 2j). However, the magnesium level was not measured in this study.

Table 2.

Germline variants related to calcium metabolism

SNP ID Gene Chrs Gene Region Function Calcium-related function or diseases
p.F114delX115 BTK X exonic nonsynonymous SNV Induces calcium mobilization and calcium-mediated signaling.
rs202054008 CACNA2D4 4 exonic nonsynonymous SNV Regulates calcium current density and activation/inactivation of calcium channels
rs75326924 CD36 3 exonic nonsynonymous SNV Regulates intracellular calcium levels by long-chain fatty acids.
rs2229291 CPT2 15 splicing NA Calcium metabolism and abnormal calcium deposition.
rs3888798 CTSC X exonic frameshift deletion Deposition of calcium salts in a tissue or location in which calcification does not normally occur.
rs147630160 CXCL16 10 exonic nonsynonymous SNV Induces calcium mobilization.
rs117643139 DRD2 4 exonic nonsynonymous SNV Pituitary adenoma-related hypokalemia and hypocalcemia [42]
rs139997095 PKD1L2 7 exonic nonsynonymous SNV Calcium ion transmembrane transport.
rs201550522 PRSS1 6 exonic nonsynonymous SNV Deposition of calcium salts in a tissue or location in which calcification does not normally occur.
rs201533738 SLX4 7 exonic nonsynonymous SNV Calcium metabolism.
rs182693954 TRPV1 12 exonic nonsynonymous SNV Ligand-activated nonselective calcium permeant cation channel involved in the detection of noxious chemical and thermal stimuli.

Table 3.

Reported cases showing a positive association between irinotecan and hypocalcemia

Case Country Tumor Stage Age Drug treatment Serum electrolyte abnormalities Onset time
2003 [43] United states Solid tumors NA 4–21 Cisplatin, irinotecan, amifostine Hypocalcemia Within 24 h after 1st treatment
2005 [44, 45] United states Colorectal cancer TxNxM1 34 Cetuximab, irinotecan Hypocalcemia, hypomagnesemia 8 weeks after 1st treatment
2009 [46] United states Colorectal cancer T3N2M0 77 Cap, irinotecan, bevacizumab Hypocalcemia, hypophosphatemia, hypokalemia, hypouricemia 5 days after the 11th treatment
2010 [47] Japan Colorectal cancer TxNxM1 61 Cetuximab, irinotecan Hypocalcemia, hypomagnesemia NA
2012 [48] Turkey Breast cancer T2N0M0 57 Irinotecan, trastuzumab Hypokalemia, hypocalcemia, hypomagnesemia 6th week of treatment

In conclusion, this study reported the first written record of a Chinese XLA patient with metastatic CRC and severe hypocalcemia following irinotecan administration. The chemotherapy regimen was carefully determined based on TDM and WES. Based on WES results and bioinformatic analysis, a germline mutation of BTK was confirmed to be the cause of XLA, and somatic mutations of ABCA6, C6, and PAX3 may contribute to the onset and metastasis of CRC. The administration of irinotecan and a number of germline mutations on genes related to calcium metabolism might collectively cause hypocalcemia.

Additional files

Additional file 1: (42.6KB, docx)

Methods of DNA sequencing and screening. The detailed method used for carrying out DNA sequencing and screening was described in words with references. (DOCX 42 kb)

Additional file 2: (116.2KB, docx)

Figure S1. Variant filtering pipeline for Whole Exome Sequencing. The step-by-step flow chart for whole exosome sequencing was illustrated with key nodes. (DOCX 116 kb)

Additional file 3: (202.7KB, docx)

Table S1. Mutations that related to efficacy (or safety) of 5-FU-like drugs. The self-selected genes or SNVs which may affect the efficacy or safety of 5-FU-based chemotherapy were listed with references. They were sub-grouped into three types which are related to 5-FU metabolism, cancer development (oncogenes), or lipid metabolism respectively. (DOCX 202 kb)

Additional file 4: (1.8MB, docx)

Figure S2. BTK expression in liver tumor tissue. BTK expression in liver tumor tissue was positively illustrated by immunohistochemistry. (DOCX 1843 kb)

Additional file 5: (29.3KB, docx)

Germline variants illuminating hypocalcemia. Bioinformatic analysis on germline variants indicated that many of these variants were related to calcium binding and transporting, several of them might even be the main reason for the hypocalcemia. (DOCX 29 kb)

Additional file 6: (34.2KB, docx)

Table S2. Germline variants related calcium binding and transporting. All of the germline line variants related to calcium binding and transporting were listed here with annotations on whether it is cancer related and its gene function. (DOCX 34 kb)

Acknowledgments

The authors gratefully acknowledge the Shanghai Committee of Science and Technology at the Shanghai Shenkang Hospital Development Center for providing funding and resources and Genesky Biotechnologies, Inc., Shanghai for preforming WES. The funders had no role in the study design, data collection, analysis, decision to publish, or preparation of the manuscript.

Abbreviations

5′-DFUR

Doxifluridine

5-FU

5-fluorouracil

ABCA6

ATP-Binding Cassette Subfamily A Member 6

BTK

Bruton tyrosine kinase

C6

Complement C6

Cap

Capecitabine

CRC

Colorectal cancer

DRT

Drug-related toxicities

ECOG

Eastern Cooperative Oncology Group

IVIG

Intravenous immunoglobulin

NAT2

N-acetyltransferase 2

NCCN

The National Comprehensive Cancer Network

PAX3

Paired Box 3

TDM

Therapeutic drug monitoring

TGFB1

Transcription of transforming growth factor beta 1

TYMP

Thymidine phosphorylase

WES

Whole exome sequencing

XLA

X-linked agammaglobulinemia

Authors’ contributions

WZ and CWS were responsible for the treatment of the patient. LMM wrote and revised the manuscript. CW collected clinical information and samples for the analyses and produced critical figures and tables for this manuscript. SXM revised and interpreted the WES data. WZP and ZX performed the TDM experiments. WH offered constructive suggestions for this study. All authors have read and approved the final manuscript.

Funding

During the whole course of this study, the study design, data collection, data analysis, data interpretation and manuscript preparation were mainly supported by the National International Scientific and Technological Cooperation Program, China (Grant No. 2015DFA31810). Part of the data analysis, which is the therapeutic drug monitoring was supported by the Clinical Science and Technology Innovation Project, Shanghai, China (Grant No. SHDC12015120).

Availability of data and materials

The datasets used and/or analyzed during the current study are available from the corresponding author upon a reasonable request.

Ethics approval and consent to participate

The study was approved by the Changzheng Hospital Biomedical Research Ethics Committee. The patients and their families have read and signed the informed consent form.

Consent for publication

Written informed consent was obtained from all patients included in this report for the use of clinical-related materials for scientific research and publications. These materials include diagnostic images, treatment and prognostic information, genetic testing results and other related data used in this report.

Competing interests

The authors declare that they have no competing interests.

Footnotes

Publisher’s Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Mingming Li and Wei Chen contributed equally to this work.

Contributor Information

Mingming Li, Email: limingming@smmu.edu.cn.

Wei Chen, Email: chenwei123@smmu.edu.cn.

Xiaomeng Sun, Email: xiaomengsun315@163.com.

Zhipeng Wang, Email: wangzhipeng@smmu.edu.cn.

Xun Zou, Email: zouxun911@163.com.

Hua Wei, Email: weihua@smmu.edu.cn.

Zhan Wang, Email: profoundamir@smmu.edu.cn.

Wansheng Chen, Email: chenwansheng@smmu.edu.cn.

References

  • 1.Tsukada S, Saffran DC, Rawlings DJ, Parolini O, Allen RC, Klisak I, et al. Deficient expression of a B cell cytoplasmic tyrosine kinase in human X-linked agammaglobulinemia. Cell. 1993;72:279–290. doi: 10.1016/0092-8674(93)90667-F. [DOI] [PubMed] [Google Scholar]
  • 2.Vetrie D, Vořechovský I, Sideras P, Holland J, Davies A, Flinter F, et al. Pillars Article: The Gene Involved in X-linked Agammaglobulinaemia Is a Member of the Src Family of Protein-Tyrosine Kinases. Nature. 1993;361:226–233. doi: 10.1038/361226a0. [DOI] [PubMed] [Google Scholar]
  • 3.Wilkie A, Vetrie D, Vorechovsky I, Sideras P, Holland J, Davies A, et al. The gene involved in X-linked agammaglobulinaemia is a member of the src family of protein-tyrosine kinases. J Med Genet. 1993;30:444. doi: 10.1136/jmg.30.5.444-b. [DOI] [PubMed] [Google Scholar]
  • 4.Väliaho J, Smith CIE, Vihinen M. BTKbase: the mutation database for X-linked agammaglobulinemia. Hum Mutat. 2006;27:1209–1217. doi: 10.1002/humu.20410. [DOI] [PubMed] [Google Scholar]
  • 5.Wang Y, Kanegane H, Wang X, Han X, Zhang Q, Zhao S, et al. Mutation of the BTK gene and clinical feature of X-linked agammaglobulinemia in mainland China. J Clin Immunol. 2009;29:352–356. doi: 10.1007/s10875-008-9262-8. [DOI] [PubMed] [Google Scholar]
  • 6.Ochs HD, Smith CI. X-linked agammaglobulinemia. A clinical and molecular analysis. Medicine (Baltimore) 1996;75:287–299. doi: 10.1097/00005792-199611000-00001. [DOI] [PubMed] [Google Scholar]
  • 7.Van der Hilst JCH, Smits BW, van der Meer JWM. Hypogammaglobulinaemia: cumulative experience in 49 patients in a tertiary care institution. Neth J Med. 2002;60:140–147. [PubMed] [Google Scholar]
  • 8.Chen X-F, Wang W-F, Zhang Y-D, Zhao W, Wu J, Chen T-X. Clinical characteristics and genetic profiles of 174 patients with X-linked agammaglobulinemia: report from Shanghai, China (2000–2015) Medicine. 2016;95:e4544. doi: 10.1097/MD.0000000000004544. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Kinlen LJ, Webster AD, Bird AG, Haile R, Peto J, Soothill JF, et al. Prospective study of cancer in patients with hypogammaglobulinaemia. Lancet. 1985;1:263–266. doi: 10.1016/S0140-6736(85)91037-2. [DOI] [PubMed] [Google Scholar]
  • 10.van der Meer JWM, van Munster IP, Nagengast FM, Weening RS, Schellekens PTA. Colorectal cancer in patients with X-linked agammaglobulinaemia. Lancet. 1993;341:1439–1440. doi: 10.1016/0140-6736(93)90883-I. [DOI] [PubMed] [Google Scholar]
  • 11.Brosens LAA, Tytgat KMAJ, Morsink FHM, Sinke RJ, Berge IJMTEN, Giardiello FM, et al. Multiple colorectal neoplasms in X-linked Agammaglobulinemia. Clin Gastroenterol Hepatol. 2008;6:115–119. doi: 10.1016/j.cgh.2007.08.019. [DOI] [PubMed] [Google Scholar]
  • 12.Bachmeyer C, Monge M, Cazier A, Le Deist F, de Saint BG, Durandy A, et al. Gastric adenocarcinoma in a patient with X-linked agammaglobulinaemia. Eur J Gastroenterol Hepatol. 2000;12:1033–1035. doi: 10.1097/00042737-200012090-00013. [DOI] [PubMed] [Google Scholar]
  • 13.Lackmann GM, Wahn V, Poremba C, Niehues T. A teenager with X-linked agammaglobulinemia and vitamin B12 deficiency anemia. J Pediatr Gastroenterol Nutr. 2005;41:360–362. doi: 10.1097/01.MPG.0000153003.59448.36. [DOI] [PubMed] [Google Scholar]
  • 14.Hajjar J, Hasan S, Forbes LR, Hemmige V, Orange JS. Gastric adenocarcinoma in a patient with X-linked Agammaglobulinemia and HIV: case report and review of the literature. Front Pediatr. 2016;4:100. doi: 10.3389/fped.2016.00100. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Mueller BU, Pizzo PA. Cancer in children with primary or secondary immunodeficiencies. J Pediatr. 1995;126:1–10. doi: 10.1016/S0022-3476(95)70491-4. [DOI] [PubMed] [Google Scholar]
  • 16.Benson AB, Venook AP, Al-Hawary MM, Cederquist L, Chen Y-J, Ciombor KK, et al. NCCN guidelines insights: Colon Cancer, version 2.2018. J Natl Compr Cancer Netw. 2018;16:359–369. doi: 10.6004/jnccn.2018.0021. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Kadoyama K, Miki I, Tamura T, Brown JB, Sakaeda T. Adverse Event Profiles of 5-Fluorouracil and Capecitabine : Data Mining of the Public Version of the FDA Adverse Event Reporting System , AERS , and Reproducibility of Clinical Observations. 2012. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.Cézé N, Thibault G, Goujon G, Viguier J, Watier H, Dorval E, et al. Pre-treatment lymphopenia as a prognostic biomarker in colorectal cancer patients receiving chemotherapy. Cancer Chemother Pharmacol. 2011;68:1305–1313. doi: 10.1007/s00280-011-1610-3. [DOI] [PubMed] [Google Scholar]
  • 19.Kou F, Lu Z, Li J, Zhang X, Lu M, Zhou J, et al. Pretreatment lymphopenia is an easily detectable predictive and prognostic marker in patients with metastatic esophagus squamous cell carcinoma receiving first-line chemotherapy. Cancer Med. 2016;5:778–786. doi: 10.1002/cam4.638. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Oken MM, Creech RH, Tormey DC, Horton J, Davis TE, McFadden ET, et al. Toxicity and response criteria of the eastern cooperative oncology group. Am J Clin Oncol. 1982;5:649–655. doi: 10.1097/00000421-198212000-00014. [DOI] [PubMed] [Google Scholar]
  • 21.Daher Abdi Z, Lavau-Denes S, Prémaud A, Urien S, Sauvage FL, Martin J, et al. Pharmacokinetics and exposure-effect relationships of capecitabine in elderly patients with breast or colorectal cancer. Cancer Chemother Pharmacol. 2014;73:1285–1293. doi: 10.1007/s00280-014-2466-0. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Ab Mutalib N-S, Md Yusof NF, Abdul S-N, Jamal R. Pharmacogenomics DNA biomarkers in colorectal Cancer: current update. Front Pharmacol. 2017;8:736. doi: 10.3389/fphar.2017.00736. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23.Staines Boone AT, Torres Martínez MG, López Herrera G, de Leija Portilla JO, Espinosa Padilla SE, Espinosa Rosales FJ, et al. Gastric adenocarcinoma in the context of X-linked agammaglobulinemia: case report and review of the literature. J Clin Immunol. 2014;34:134–137. doi: 10.1007/s10875-013-9971-5. [DOI] [PubMed] [Google Scholar]
  • 24.Sharma D, Gupta A, Goel S, Sharma M, Rawat A, Singh S. Large BTK gene mutation in a child with X-linked agammaglobulinemia and polyarthritis. Clin Immunol. 2017;183:109–111. doi: 10.1016/j.clim.2017.08.005. [DOI] [PubMed] [Google Scholar]
  • 25.Saito K, Scharenberg AM, Kinet JP. Interaction between the Btk PH domain and phosphatidylinositol-3,4,5-trisphosphate directly regulates Btk. J Biol Chem. 2001;276:16201–16206. doi: 10.1074/jbc.M100873200. [DOI] [PubMed] [Google Scholar]
  • 26.Wang X, Wang Y, Kanegane H, Toshio M, Yu Y. Gene diagnosis of X-linked agammaglobulinemia. Zhonghua er ke za zhi = Chin J Pediatr. 2005;43:449–452. [PubMed] [Google Scholar]
  • 27.Maarschalk-Ellerbroek LJ, Oldenburg B, Mombers IMH, Hoepelman AIM, Brosens LA, GJA O, et al. Outcome of screening endoscopy in common variable immunodeficiency disorder and X-linked agammaglobulinemia. Endoscopy. 2013;45:320–323. doi: 10.1055/s-0032-1326078. [DOI] [PubMed] [Google Scholar]
  • 28.Fallah-Rad N, Ross MA. Managing hypercalcaemia and hypocalcaemia in cancer patients. Curr Opin Support Palliat Care. 2013;7:265–271. doi: 10.1097/SPC.0b013e3283640f5f. [DOI] [PubMed] [Google Scholar]
  • 29.Chung IF, Chen C-Y, Su S-C, Li C-Y, Wu K-J, Wang H-W, et al. DriverDBv2: a database for human cancer driver gene research. Nucleic Acids Res. 2016;44:D975–D979. doi: 10.1093/nar/gkv1314. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 30.Ding P, Li L, Huang T, Yang C, Xu E, Wang N, et al. Complement component 6 deficiency increases susceptibility to dextran sulfate sodium-induced murine colitis. Immunobiology. 2016;221:1293–1303. doi: 10.1016/j.imbio.2016.05.014. [DOI] [PubMed] [Google Scholar]
  • 31.Terzić J, Grivennikov S, Karin E, Karin M. Inflammation and colon cancer. Gastroenterology. 2010;138:2101–2114.e5. doi: 10.1053/j.gastro.2010.01.058. [DOI] [PubMed] [Google Scholar]
  • 32.Mayanil CS, George D, Freilich L, Miljan EJ, Mania-Farnell B, McLone DG, et al. Microarray analysis detects novel Pax3 downstream target genes. J Biol Chem. 2001;276:49299–49309. doi: 10.1074/jbc.M107933200. [DOI] [PubMed] [Google Scholar]
  • 33.Wang Q, Fang W-H, Krupinski J, Kumar S, Slevin M, Kumar P. Pax genes in embryogenesis and oncogenesis. J Cell Mol Med. 2008;12:2281–2294. doi: 10.1111/j.1582-4934.2008.00427.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 34.Hedditch EL, Gao B, Russell AJ, Lu Y, Emmanuel C, Beesley J, et al. ABCA transporter gene expression and poor outcome in epithelial ovarian Cancer. Jnci-J Natl Cancer Inst. 2014;106(7):duj149. 10.1093/jnci/dju149. [DOI] [PMC free article] [PubMed]
  • 35.Jelinek DF, Tschumper RC, Stolovitzky GA, Iturria SJ, Tu YH, Lepre J, et al. Identification of a global gene expression signature of B-chronic lymphocytic leukemia. Mol Cancer Res. 2003;1:346–361. [PubMed] [Google Scholar]
  • 36.Magalon H, Patin E, Austerlitz F, Hegay T, Aldashev A, Quintana-Murci L, et al. Population genetic diversity of the NAT2 gene supports a role of acetylation in human adaptation to farming in Central Asia. Eur J Hum Genet. 2008;16:243–251. doi: 10.1038/sj.ejhg.5201963. [DOI] [PubMed] [Google Scholar]
  • 37.Torre LA, Siegel RL, Ward EM, Jemal A. Global Cancer incidence and mortality rates and trends--an update. Cancer Epidemiol Biomark Prev. 2016;25:16–27. doi: 10.1158/1055-9965.EPI-15-0578. [DOI] [PubMed] [Google Scholar]
  • 38.Zhang Q-L, Zhao L-G, Li H-L, Gao J, Yang G, Wang J, et al. The joint effects of major lifestyle factors on colorectal cancer risk among Chinese men: a prospective cohort study: combined lifestyle and colorectal cancer risk. Int J Cancer. 2018;142:1093–1101. doi: 10.1002/ijc.31126. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 39.Huang DW, Sherman BT, Lempicki RA. Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res. 2009;37:1–13. doi: 10.1093/nar/gkn923. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 40.Huang DW, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc. 2009;4:44–57. doi: 10.1038/nprot.2008.211. [DOI] [PubMed] [Google Scholar]
  • 41.Stelzer G, Plaschkes I, Oz-Levi D, Alkelai A, Olender T, Zimmerman S, et al. VarElect: the phenotype-based variation prioritizer of the GeneCards suite. BMC Genomics. 2016;17:444. doi: 10.1186/s12864-016-2722-2. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 42.Saif MW, Fekrazad MH, Ledbetter L, Diasio RB. Hypokalemia secondary to capecitabine: a hidden toxicity? Ther Clin Risk Manag. 2007;3:177–180. doi: 10.2147/tcrm.2007.3.1.177. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.Souid A-K, Dubowy RL, Blaney SM, Hershon L, Sullivan J, McLeod WD, et al. Phase I clinical and pharmacologic study of weekly cisplatin and irinotecan combined with amifostine for refractory solid tumors. Clin Cancer Res. 2003;9:703–710. [PubMed] [Google Scholar]
  • 44.Schrag D, Chung KY, Flombaum C, Saltz L. Cetuximab therapy and symptomatic hypomagnesemia. J Natl Cancer Inst. 2005;97:1221–1224. doi: 10.1093/jnci/dji242. [DOI] [PubMed] [Google Scholar]
  • 45.Altundag K, Altundag O, Baptista MZ, Turen S, Atik MA. Re: Cetuximab therapy and symptomatic hypomagnesemia. J Natl Cancer Inst. 2005;97:1791–1792. doi: 10.1093/jnci/dji412. [DOI] [PubMed] [Google Scholar]
  • 46.Shaikh A, Wiisanen ME, Gunderson HD, Leung N. Acquired Fanconi syndrome after treatment with capecitabine, irinotecan, and bevacizumab. Ann Pharmacother. 2009;43:1370–1373. doi: 10.1345/aph.1M120. [DOI] [PubMed] [Google Scholar]
  • 47.Kono T, Satomi M, Asama T, Ebisawa Y, Chisato N, Suno M, et al. Cetuximab-induced hypomagnesaemia aggravates peripheral sensory neurotoxicity caused by oxaliplatin. J Gastrointest Oncol. 2010;1:97–101. doi: 10.3978/j.issn.2078-6891.2010.024. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 48.Petekkaya I, Akin T, Gezgen G, Roach EC, Ozisik Y, Altundag K. Electrolyte abnormalities due to irinotecan administration in metastatic HER-2 positive breast cancer patients. J BUON. 2012;17:800. [PubMed] [Google Scholar]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Additional file 1: (42.6KB, docx)

Methods of DNA sequencing and screening. The detailed method used for carrying out DNA sequencing and screening was described in words with references. (DOCX 42 kb)

Additional file 2: (116.2KB, docx)

Figure S1. Variant filtering pipeline for Whole Exome Sequencing. The step-by-step flow chart for whole exosome sequencing was illustrated with key nodes. (DOCX 116 kb)

Additional file 3: (202.7KB, docx)

Table S1. Mutations that related to efficacy (or safety) of 5-FU-like drugs. The self-selected genes or SNVs which may affect the efficacy or safety of 5-FU-based chemotherapy were listed with references. They were sub-grouped into three types which are related to 5-FU metabolism, cancer development (oncogenes), or lipid metabolism respectively. (DOCX 202 kb)

Additional file 4: (1.8MB, docx)

Figure S2. BTK expression in liver tumor tissue. BTK expression in liver tumor tissue was positively illustrated by immunohistochemistry. (DOCX 1843 kb)

Additional file 5: (29.3KB, docx)

Germline variants illuminating hypocalcemia. Bioinformatic analysis on germline variants indicated that many of these variants were related to calcium binding and transporting, several of them might even be the main reason for the hypocalcemia. (DOCX 29 kb)

Additional file 6: (34.2KB, docx)

Table S2. Germline variants related calcium binding and transporting. All of the germline line variants related to calcium binding and transporting were listed here with annotations on whether it is cancer related and its gene function. (DOCX 34 kb)

Data Availability Statement

The datasets used and/or analyzed during the current study are available from the corresponding author upon a reasonable request.


Articles from BMC Medical Genetics are provided here courtesy of BMC

RESOURCES