Abstract
Animals and humans continuously engage in small, spontaneous motor actions, such as blinking, whisking, and postural adjustments (‘fidgeting’). These movements are accompanied by changes in neural activity in sensory and motor regions of the brain. The frequency of these motions varies in time, is affected by sensory stimuli, arousal levels, and pathology. These fidgeting behaviors can be entrained by sensory stimuli. Fidgeting behaviors will cause distributed, bilateral functional activation of neural activity in the 0.01 to 0.1 Hz frequency range that will show up in fMRI and wide-field calcium neuroimaging studies, and will contribute to the observed functional connectivity among brain regions. However, despite the large potential of these behaviors to drive brain-wide activity, these fidget-like behaviors are rarely monitored. We argue that studies of spontaneous and evoked brain dynamics awake animals and humans should closely monitor these fidgeting behaviors. Differences in these fidgeting behaviors due to arousal or pathology will ‘contaminate’ ongoing neural activity, and lead to apparent differences in functional connectivity. Monitoring and accounting for the brain-wide activations by these behaviors is essential during experiments in order to differentiate fidget-driven activity from internally-driven neural dynamics.
Keywords: whisking, spontaneous activity, resting-state, sensorimotor, twitch
Introduction
“But when the audience is bored…they sway from side to side…”
Animals possess the ability to move, and the need to control these motions drove the evolution of the nervous system. Motor behaviors in animals can be in the form of stereotyped patterns of muscle contractions in support of physiological processes such as breathing (Feldman and others, 2013), digestion (Marder 2012), or locomotion (Grillner 2006). Movements can also be learned actions with complex dynamics (Churchland and others, 2012; Vallentin and others, 2016). While these two extremes of motor behavior are well studied, there is a less well-studied range of spontaneous motor actions (such as blinking, twitching, sniffing, postural adjustments, and the movement of sensory organs such as eyes and vibrissae, which we collectively refer to as ‘fidgeting’), in which both awake animals and humans constantly engage (Galton 1885). Though these movements can be small, they have been linked with widespread alterations of neural activity and hemodynamic signals (Bristow and others, 2005a; Ferezou and others, 2007; Guipponi and others, 2014; Winder and others, 2017), and the impact of these changes on ongoing brain dynamics have been greatly underappreciated. Moreover, the frequency and timing of these movements are influenced by sensory stimulation, tasks and arousal. Because these movements are not typically monitored in awake animals or humans during neuroimaging experiments, they present a confound in interpreting brain-wide activity (Gonzalez-Castillo and others, 2012) in the ‘resting-state’ (Fox and Raichle 2007), in which spontaneous patterns of activity are attributed to internal rumination rather than external sensory signals.
Here, we review evidence from studies in humans and animals showing that these spontaneous behaviors drive neural activity and functional activations in a wide variety of brain regions. The frequency of these ‘fidgeting’ behaviors vary over a wide range of time scales (Figure 1), are affected by tasks and brain state, and will consequently impact brain activity in addition to any other changes. Though we refer to this neural activity as ‘fidget-driven’, the relationship between neural activity and the movement could be of several (non-exclusive) origins. Neural activity associated to the fidgeting movement could be part of the motor commands that drive the movement, or somatosensory responses driven by touch receptors or proprioceptors. Fidget-related neural activity in a brain region could also result from common drive from a region that modulates the fidgets. As systems neuroscience moves towards whole-brain imaging using voltage-sensitive probes (Ferezou and others, 2007; Mohajerani and others, 2013) and genetically-encoded indicators in awake animals (Allen and others, 2017; Chen and others, 2017b; Murphy and others, 2016; Xie and others, 2016), or large-scale electrophysiological recordings from multiple brain regions (Dotson and others, 2017; Harris and others, 2016), we argue that careful behavioral observation should be done to avoid the confounds that ‘fidgeting’-induced activations will cause in these studies.
Figure 1). Spontaneous behaviors have characteristic timescales on the range from seconds to thousands of seconds.
For each behavior, the inter-behavior interval (typical time between behaviors or timescale on which the behavior varies) is plotted. Note that many behaviors vary on the 10–100 second timescale. Top shows humans, bottom rodents. The same range of timescales is used to assay functional connectivity in fMRI experiments (0.01 Hz-0.1 Hz). See relevant sections for references.
We focus on three easily detectable and quantifiable behaviors: blinking, spontaneous whisker motion, and postural adjustments. All of these behaviors involve bilateral activation of distributed brain networks. We also touch upon other behaviors, and the potential physiological roles of spontaneous behaviors and fidgeting. We conclude by discussing the confounds introduced by these movements, and potential ways of monitoring and accounting for them.
Blinking drives brain-wide neural signals and blink rate is affected by mental state
Humans, other primates, and rodents constantly move and blink their eyes (Payne and Raymond 2017), changing the visual information reaching the retina. A great deal of progress has been made in understanding the neural control and perceptual effects of eye movements, which are beyond the scope of this review. The physiological purpose of blinking is well understood, as blinking protects the cornea from damage and prevents drying of the eye. Blinks are also accompanied by a distinct type of eye movement (Khazali and others, 2016). Humans blink their eyes every few seconds (Karson 1983; Stern and others, 1984). Rats and mice also blink, though at lower rates than humans (Blount 1927; Kaminer and others, 2011). During the blink, the eyelid occludes the visual field for a few tens of milliseconds, resulting in a transient period of darkness. Many endogenous and environmental factors can alter the blink rate, including mental state, fatigue, and the nature of the task at hand (Stern and others, 1984). For example, both fatigue (Stern and others, 1994), and prolonged video screen viewing increase blink rate (Nakamori and others, 1997). The spontaneous blink rate is inversely correlated with mental load (Holland and Tarlow 1972; Van Orden and others, 2001). Drugs that modulate the dopaminergic system also alter blink rate (Karson 1979; Karson 1983). Blink rate is elevated in schizophrenics (Karson and others, 1990). Blink rate is affected by tasks and visual stimuli. When viewing a video clip, blink events are synchronized across repeated viewing by the same subject, and across subjects, indicating that they are reliably driven by certain patterns of sensory input (Nakano and others, 2009). Thus, the rate of blinking depends on both internal state, as well as the external stimulation.
Changes in neural activity and blood oxygen-level dependent (BOLD) signals caused by blinking are found in early visual areas, but are also seen in higher areas throughout the brain (Figure 2). Blinks cause decreases in the firing rates of neurons in early visual areas (Gawne and Martin 2000; Golan and others, 2016), and the neural responses to blinking in the visual cortex are similar, but not identical, to those induced by a brief darkening of the visual scene. Blink-related modulations are visible in BOLD fMRI signals in the primary visual cortex (Bristow and others, 2005b; Hupe and others, 2012), as well as higher brain regions, such as the frontal eye field (FEF), and regions associated with the default network and somatosensory areas (Bristow and others, 2005a; Guipponi and others, 2014; Nakano and others, 2013), though these signals are not always detectable in surface electrodes in epileptic patients (Golan and others, 2016). Due to the bilateral nature of blinking movements, blink-related activation patterns are bilaterally symmetric (Bristow and others, 2005a; Guipponi and others, 2014; Hupe and others, 2012; Nakano and others, 2013), similar to the networks extracted from resting-state studies. Because blinks alter neural activity in many brain regions, they are not just a confound for visual perception studies.
Figure 2). Blinking activates multiple brain regions in humans and non-human primates as measured with BOLD fMRI.
A) Top, brain regions showing significant responses to voluntary blinking. Bottom, brain regions showing significant responses to external darkening. Note that these are separate sets of brain regions, showing the response to blinking is not just due to a transient removal of visual input. Occipital cortex (OC), frontal eye field (FEF), cerebellum (C). B) Brain regions in the monkey brain that shown significant correlations with the spontaneous blink rate, demonstration spontaneous blinking is associated with distributed patterns of brain activation. A adapted from (Bristow and others, 2005a) with permission, B adapted from (Guipponi and others, 2014) with permission.
If the rate of blinking were constant, ongoing blinks would not be an issue, and they would simply be averaged out. However, spontaneous eye blink rate dynamically varies on slow time scales (~0.001 Hz-0.1Hz), and these variations can drive correlated activity in multiple brain regions. The inter-blink interval in both humans and rats follows a power-law distribution (Kaminer and others, 2011), similar to spontaneous hemodynamic signals in the cortex (He and others, 2010), and blinking in humans and rodents are auto-correlated, producing low-frequency modulations in baseline rates. These changes in blink rate occur on the scale of tens to hundreds of seconds (Kaminer and others, 2011), and will drive modulation of functional signals in the frequency bands used in functional connectivity studies (Chang and Glover 2010). Blink-driven neural activity could play a role in the generation of the ubiquitous slow, 1/f-like fluctuations seen in neural activity (Leopold and others, 2003), brain oxygenation (Li and others, 2015), and hemodynamic signals (Fox and Raichle 2007). Thus, the non-stationarity of blinking behavior precludes the neural and hemodynamic signals that are correlated with blinking from being removed by temporal averaging.
Any difference in blink rate across subjects will cause changes in the input to the visual system and will drive changes in the correlations in blink-related brain areas, which will show up as changes in functional connectivity. Blinking can be thought of as a bilateral, slowly-varying visual and somatosensory stimulus that is not under direct control of the experimenter.
Spontaneous and stimulus-evoked vibrissae movements drive neural and hemodynamic responses
Rodents have emerged as a pre-eminent model system for systems neuroscience research due to their genetic tractability and ability to perform relatively complex behavioral tasks (Hanks and Summerfield 2017; O’Connor and others, 2009). Rats and mice use their vibrissae (whiskers) to sense the world around them by engaging in ‘bouts’ of intermittent whisking that can last for hundreds of milliseconds to several seconds (Kleinfeld and Deschênes 2011). The whiskers are actively moved to generate contact forces on objects in order to form a sensory percept, analogous to the creation of visual images by eye movements (Kleinfeld and others, 2006). The rodent vibrissae system has been an invaluable model for the investigation of cortical circuits (Petersen 2007) and active sensation (Kleinfeld and Deschênes 2011). Whisker movements can be tracked with high speed video (Clack and others, 2012; Ritt and others, 2008). Whisker motion is controlled by a brainstem central pattern generator linked to the respiratory control nuclei (Moore and others, 2013), and both protraction and retraction are under active control. Volitional whisker movement is associated with activation of multiple sensorimotor areas. Volitional whisking bilaterally increases firing rates in brainstem, thalamic and cortical motor somatosensory areas (de Kock and Sakmann 2009; Hill and others, 2011; Moore and others, 2015; Urbain and others, 2015).
Whisking is driven by a variety of stimuli and activates many brain regions (Figure 3). While awake rodents are extensively used for brain-wide imaging studies using fMRI (Ferenczi and others, 2016; Gao and others, 2017), voltage-sensitive indicators (Mohajerani and others, 2013), and genetically encoded calcium indicators (Allen and others, 2017; Ma and others, 2016; Murphy and others, 2016), whisking is typically only monitored when it is important for the task at hand (Chen and others, 2017b; Winder and others, 2017). Whisking can be elicited by social interaction (Bobrov and others, 2014; Lenschow and Brecht 2015), a familiar environment (Ganguly and Kleinfeld 2004), odorants (Kurnikova and others, 2017; Moore and others, 2013), or an auditory stimulus (Winder and others, 2017). Whisking can also phase lock to the hippocampal theta rhythm (Grion and others, 2016; Macrides and others, 1982). Contact with an object is not required to drive changes in neural activity, as whisking in air drives increases in activity in the somatosensory cortex (de Kock and Sakmann 2009; Ganguly and Kleinfeld 2004; Gentet and others, 2010; O’Connor and others, 2010), thalamus (Urbain and others, 2015), motor cortex (Sreenivasan and others, 2016), and the cerebellum (Chen and others, 2017a; O’Connor and others, 2002). While these increases in neural activity may not be as dramatic as those elicited by passive whisker stimulation, they are large enough to cause hemodynamic signals in the somatosensory cortex (Winder and others, 2017) (Figure 3). Whisking-related activity is likely to be present in many different brain regions, as voltage-sensitive dye recording have shown cortex-wide waves of depolarization following the initiation of spontaneous whisking in mice (Ferezou and others, 2007). A recent report making use of large-scale recordings of neural activity in visual cortex of awake mouse found a substantial portion of the spontaneous activity in the visual cortex was correlated to orofacial movements and whisking (Stringer and others, 2018).
Figure 3). Whisking is elicited by multiple stimuli and activates many brain regions.
A) Volitional whisking can be evoked by conspecifics, presentation of the home cage, odors, and auditory stimuli. Volitional whisking activation is accompanied by increases in neural activity in motor cortex (M1) and somatosensory cortex (S1), but also thalamus (Th), cerebellum (Cb), hippocampus (Hc) and visual cortex (V1). Other brain regions not typically associated with somatosensation may be activated as well. B) Top, average volitional whisking-evoked changes in local field potential power aligned to the onset of volitional whisking bouts. Bottom, average change in the intrinsic optical signal (a measure of blood volume) during volitional whisking bouts. A decrease in ∆R/R is caused by an increase in blood volume (vasodilation). C) Location of imaging window (black rectangle) relative to specific regions in the somatosensory cortex. Upper jaw (UJ), lower jaw (LJ), nose (N), forepaw (FP), forelimb (FL), hindpaw (HP), hindlimb (HL), trunk (TR), dysgranular zone (DZ). D) Averaged reflectance changes relative to baseline for a representative animal during volitional whisking. Brightness shows the mean normalized reflectance change from baseline. The light blue circular regions show the positions of individual macro-vibrissae barrel reconstructed from layer IV cytochrome oxidase staining. E) Whisking is evoked by auditory stimulation. Whisker movements (yellow dots) are shown aligned to the presentation of an auditory stimulus in 24 representative trials. Whisking is reliably elicited in time-locked manner by sound. F) Changes in the intrinsic optical signal (∆R/R) in the somatosensory cortex from the example animal in (E) in response aligned to volitional whisking onset (grey) or auditory stimulus onset (yellow). The “cross-modal” response in somatosensory cortex is actually driven by whisking. B-E adapted from (Winder and others, 2017).
Many non-tactile stimuli drive whisking, and whisking drives activation of many brain regions, including those not canonically related to somatosensation (Figure 3). Thus, non-somatosensory stimuli or tasks will frequently induce whisker movement, as well as corresponding changes in neural activity and hemodynamic signals. Whisking-related changes in neural activity (and likely hemodynamic signals) will not be restricted to the somatosensory cortex, but will be present throughout the brain.
Head and body motions and postural adjustments are ongoing in awake animals and humans
While optical and electrophysiological studies in rodents usually use head-fixation during imaging (Dombeck and others, 2007; O’Connor and others, 2009), human and rodent fMRI studies typically do not tightly restrain the head. Head motion will generate two kinds of signals in fMRI, an artifactual activation due to spin history effects, another due to ‘true’ activation reflecting the motion-related changes in neural activity. As the motion is generated by activity in the brain, and will cause somatosensory activity (driven by both cutaneous and proprioceptive input), it will also be accompanied by changes in neural activity in motor and somatosensory areas, leading to true functional signals (Yan and others, 2013). It is now well established that spontaneous head motion causes artifacts in resting-state fMRI studies, and that head motion can be larger in children, psychiatric patients, and autistic subjects than in controls (Engelhardt and others, 2017; Huijbers and others, 2017; Power and others, 2012; Satterthwaite and others, 2017; Satterthwaite and others, 2012; Van Dijk and others, 2012). Head motion is stable within subjects (Zeng and others, 2014) and is heritable (Couvy-Duchesne and others, 2014; Engelhardt and others, 2017; Hodgson and others, 2016). Individual differences in mind-wandering is positively correlated to fidgeting (Carriere and others, 2013; Seli and others, 2014), which could also generate spurious correlations between brain activity and self-reported mental state. Head motion is also strongly correlated with body mass index (BMI), IQ, and other traits (Siegel and others, 2016). Head motion may also co-vary with arousal level (Yuan and others, 2013; Zeng and others, 2014), and these changes in arousal may drive differential patterns of network activity. These results suggest that fidgeting is a stable individual trait that is correlated with many other cognitive and non-cognitive traits.
Because large head movement are readily apparent in fMRI scans, there has been a great deal of work devoted to removing and minimizing head motion-related artifacts (Liu 2016; Power and others, 2014; Satterthwaite and others, 2012; Van Dijk and others, 2012). However, functional activation of motor and somatosensory areas will occur with any motion, and body motion is not monitored in most studies. Relatively small body motions are accompanied by robust motor cortex activation, which is clearly apparent in fMRI (Birn and others, 1999; Bright and Murphy 2015; Lotze and others, 2000; Meier and others, 2008; Yan and others, 2013). Scrubbing frames with motion from the data set will not completely remove this functional activation, as the functional activity will lag the motion events and persist for seconds, well beyond the period of the motion due to the slow time course of the hemodynamic response function (Birn and others, 1999). One should bear in mind that not all body or head motion will cause detectable brain displacement due the relative low spatial resolution of MRI, so it cannot be assumed that there is no motion even if none is visible, since these small motions can drive functional activation.
Optical imaging studies rely on head restraint to minimize head motion (Gao and others, 2017), but similar confounds are present in these studies. Rodents are often imaged on top a spherical treadmill (Dombeck and others, 2007), which allow a great deal of body motion. Because the ball motion, not the legs are monitored, animals will be free to engage in movements (e.g. stomping, grooming, twitching (Powell and others, 2015)) that may not be detected unless they drive appreciable movement of the treadmill. In head-fixed mice, body and limb movements, even postural adjustments, drive localized increases in blood flow and arterial dilation in the somatosensory cortex, and venous distension across the cortex (Gao and Drew 2016; Gao and others, 2015; Huo and others, 2015a; Huo and others, 2015b; Huo and others, 2014) as well as increases in neural activity and blood flow in the cerebellum (Nimmerjahn and others, 2009).
In addition to small, spontaneous postural movements of the head, the neck muscle become engaged prior to other movements and in a task- and stimulus-locked manner. These same neck muscles are activated during movement and posture changes (Corneil and others, 2001), and these neck muscles are activated during eye movements even in head-fixed animals (Lestienne and others, 1984). There are anticipatory neck muscle activations in humans and non-human primates (Goonetilleke and others, 2015). Visual stimuli in humans produce stimulus-locked responses in limb skeletal muscle electromyograms (EMGs) (Gu and others, 2016; Pruszynski and others, 2010; Wood and others, 2015). In rodents, visual stimulation induces body movements (visually-evoked fidgets, ‘vidgets’ (Cooke and others, 2015)) (Figure 4). There is extensive evidence for overt anticipatory movements during covert attention tasks and in response to sensory stimulation, likely mediated through the superior colliculus (Corneil and Munoz 2014). Recent wide-field GCaMP imaging in mice performing a decision-making task has shown that movement-related changes in neural activity are present across the whole cortex, and these movement related signals are larger than task-related neural activity (Musall and others, 2018). To summarize, many sorts of tasks and stimuli (including ones that are not overly motor), are preceded, accompanied, and/or followed by muscle activation in both humans and animals. These muscle activations will generate proprioceptive and cutaneous feedback that will activate somatosensory areas, as well as in brain regions that receive input from the superior colliculus (Corneil and Munoz 2014). While it may be tempting to use anesthesia to remove these movements, anesthesia causes enormous disruptions of normal brain function (see discussion) that make it inappropriate for use in studying normal brain function.
Figure 4). Stimulus-evoked fidgeting or direct neuronal projections can drive brain-wide signals in response to a stimulus.
A) Mice naturally and spontaneously generate motor resposnes to visual stimuli. Presentation of a grating induces a ‘vidget’, a visually-evoked fidget (left), and the movement is detected with a piezo sensor (right). B) The amplitude of the vidget behavior increases with the contrast of the visual stimulus. A and B adapted from (Cooke and others, 2015) with permission. C) A visual stimulus drives activations of visual cortex (Vis.) (1), whose neuronal projections cause activation in somatosensory (Som.) and motor cortices (2). B) Alternatively, the visual stimulation could drive neural activity in visual cortex (1), which drives neural activity in motor cortex (2), leading to body movements and activation of cutaneous and proprioceptive somatosensory afferents (3), which then lead to somatosensory cortex activation (4). Global activation as in (A) is often interpreted as being due to visual cortex sending signals directly to other brain regions. Note that the two possibilities are not mutually exclusive.
Respiration and sniffing behaviors are modulated by tasks and non-olfactory stimuli
Breathing is a periodic behavior, with slow variations in rate, punctuated by sighs (Li and others, 2016) that occur every few minutes. Respiration-related nuclei project to the locus coeruleus, and sighing can change arousal levels (Yackle and others, 2017), but respiration by itself probably does not drive time-locked brain-wide electrical responses (Parabucki and Lampl 2017). As the somatosensory cortex receives sensory input from the phrenic nerve (Davenport and others, 2010), movement of the torso during respiration may drive bilateral somatosensory activation, and slow modulation of respiration would cause corresponding slow variations in neural activity in the trunk and visceral representations in somatosensory cortex. The confounds of respiration on brain-wide BOLD signals (the so-called ‘global signal’) are well known (Birn and others, 2008a; Birn and others, 2009; Birn and others, 2008b; Murphy and others, 2013). In humans, cognitive tasks can drive task-linked breathing (Birn and others, 2009). In rodents, sniffing behaviors increase in a time-locked manner during non-olfactory tasks (Wesson and others, 2008). Sniffing in rodents is accompanied by complex movements of the nose (Kurnikova and others, 2017), which likely involve somatosensory and motor areas of the brain, just as whisking does. While obviously respiration-related neural and hemodynamic signals cannot be avoided, respiration frequency, amplitude and end-tidal CO2 can be monitored in animals (Moore and others, 2013) and humans (Birn and others, 2008a).
Tongue movements and swallowing activate sensory and motor areas
Finally, movement of the tongue and mouth may contribute to spontaneous activity. While whisker, body and head movements and blinking are often readily observable, movements of the tongue and pharynx may not be outwardly visible. These oral movements will drive activity in sensory, motor, and higher brain structures. Tongue motion is associated with motor cortex activation in humans (Meier and others, 2008), and motor cortex and frontal areas in mice (Chen and others, 2017b; Komiyama and others, 2010). Swallowing also causes bilateral motor cortex activation, as well as the insula and somatosensory cortex (Birn and others, 1999; Hamdy and others, 1999; Martin and others, 2001; Mihai and others, 2014). Spontaneous swallowing events occur 20–30 times per hour in humans (Lear and others, 1965), often enough to occur several times during a typical resting-state scan (10–20 minutes). Jaw muscle electromyography (EMG) are very sensitive (Miller 1978), and jaw motion lead to distributed patterns of brain activation visible in human neuroimaging experiments (Tamura and others, 2003).
Possible physiological roles of fidgeting-like behaviors
While fidgeting behaviors are ubiquitous, their purpose is poorly understood. Active sensing behaviors and blinking have clear perceptual and physiological roles, though why humans and animals constantly make small bodily motions is not clear. There are several plausible, non-exclusive origins for these movements. Muscles exhibit thixotropy, a use-dependent reduction in their passive stiffness (Campbell and Lakie 1998; Lakie and Robinson 1988; Vernooij and others, 2016). Contraction reduces the passive stiffness of the muscle, and this stiffness increases gradually over several seconds following a movement (Lakie and Robson 1988). Muscle twitches every few seconds will keep muscles from becoming too stiff and keep the muscles in a range of roughly constant stiffness, making it easier to generate precise movements. Because sensory neurons adapt their dynamic range to match recent stimulus statistics (Brenner and others, 2000; Fairhall and others, 2001), another possibility is that periodic motion serves to help ‘pre-adapt’ somatosensory and proprioceptive neurons. Occasional twitches or movements might serve to put sensory neurons in the appropriate coding regime, so that when a substantial movement is made, proprioceptive neurons can more accurately encode the resulting somatosensory stimulus. Another possible origin of fidgeting behavior is that it represents ‘leakage’ of motor commands from the brain. Motor movements are typically controlled by populations of neurons that require pre-movement preparatory activity (Churchland and others, 2010), but usually this preparatory activity in the motor cortex effectively cancels out at the level of motor outputs (Kaufman and others, 2014). Twitching movements might represent imperfect cancellations. Lastly, fidgeting movements may play an important role generating accurate sensory-motor maps (Blumberg and others, 2013). Whisker twitches during sleep in juvenile animals serves an instructive role in sensory map formation (Blumberg and others, 2015; Tiriac and others, 2012), and such movements may play a similar role sharpening and maintaining maps in awake adults. None of these proposed purposes categorically excludes any of the others, and different types of spontaneous movements may serve different roles. Comparative ethological studies examining species-specific differences in fidgeting may help to elucidate the function of these movements (Brenowitz and Zakon 2015).
Discussion
Ameliorating the confounds of fidget-like and spontaneous movements in systems neuroscience and neuroimaging studies.
Spontaneous fidgeting movements in both humans and animals drive activation of multiple sensory-motor brain regions. These behaviors are not uniform in time, as they show temporal correlations, and their rates and timing are modulated by tasks, sensory stimulation, and arousal levels. Because of this, spontaneous fidgeting motions cannot be treated simply as ‘background’ and ignored. As these behaviors are unavoidable in awake animals, they will contribute to whole-brain behaviorally-triggered activation patterns and ‘spontaneous’ activity. Because these behaviors are accompanied by synchronous increases in neural activity in sensory and motor regions, they will show up in resting-state studies as functionally connected brain regions that could be erroneously interpreted as arising from direct neuronal connections (Figure 4). When the fidgeting behaviors are triggered by a stimulus (for example, visual stimulation), there could be an accompanying activation of somatosensory and motor areas that could be erroneously interpreted as a cross-modal activation by the visual stimulus. Seemingly innocuous differences in the environmental conditions could potentially have impacts on spontaneous fidgeting motions, which will then drive changes in neural activity. For a plausible, but speculative example of how small environmental changes could have an effect on measured brain responses, variations in the humidity will alter blink rate (Nakamori and others, 1997), and these alterations of blink rate could have an impact on the default network (Nakano and others, 2013). Another example is presentation of a visual stimulus which elicits movement (Figure 4). This movement will drive cutaneous and proprioceptive sensory neurons, which will in turn drive activity in the somatosensory cortex. Without measuring and accounting for behavioral changes, differences in the fidgeting behavior across subjects could show as differences in functional connectivity or patterns of global brain activation.
Fidgeting behaviors may also be related to the “global signal” (Fox and others, 2009; Murphy and others, 2009) seen in the blood oxygen and cerebral volume measures (Scholvinck and others, 2010). The global signal is also associated with head motion (Power and others, 2017). While the processing steps that remove the global signal are controversial (Fox and others, 2009; Liu 2016; Murphy and others, 2009; Power and others, 2017), there is increasing evidence that these signals are related to arousal levels and transitions (Chang and others, 2016; Liu and others, 2018; Turchi and others, 2018; Wong and others, 2013). Global signals are often linked to respiration changes (Power and others, 2017), and may be linked to sighing. The relationship between fidgeting movements and arousal level may be complex or bimodal, or have species-specific differences. High arousal levels could result in more head movements, as could low arousal via a loss of self-control or muscle tone.
While fidgeting-like behaviors can be stopped by anesthesia, using anesthesia to study brain-wide dynamics is akin to “destroying the village in order to save it”. Anesthesia catastrophically disrupts nearly every aspect of normal brain function (Brown and others, 2010; Gao and others, 2017), making it an unacceptable alternative for studying brain dynamics for most questions. Anesthesia drastically lowers brain metabolism, decreasing it by 50% (Alkire and others, 1995; Alkire and others, 1997), which is comparable to the decrease seen in vegetative comas (Levy and others, 1987). Anesthesia disrupts neurovascular coupling, the relationship between neural activity and increases in blood flow that underlie fMRI and other hemodynamic imaging techniques (Desai and others, 2011; Drew and others, 2011; Knutsen and others, 2016; Martin and others, 2002; Pisauro and others, 2013). Anesthesia also profoundly disrupts astrocyte calcium dynamics (Nimmerjahn and others, 2009; Thrane and others, 2012), neural activity and neural responsiveness to sensory stimuli (Cardin and Schmidt 2004; Chapin and Woodward 1981; Ferezou and others, 2007; Rinberg and others, 2006), and baseline brain oxygenation levels (Lyons and others, 2016). The brain extracellular space is increased under anesthesia relative to the awake animal (Xie and others, 2013), while the brain temperature is markedly decreased by anesthesia (Kalmbach and Waters 2012; Shirey and others, 2015). Resting-state functional connectivity in both humans and animals is greatly disrupted by anesthesia (Akeju and others, 2014; Ferenczi and others, 2016; Lewis and others, 2012; Liang and others, 2012; Liang and others, 2015; Liu and others, 2013; Liu and others, 2011; Moeller and others, 2009; Nallasamy and Tsao 2011). However, if anesthesia must be used for a study, there are anesthetic paradigms that minimize the functional connectivity differences between the anesthetized and awake state (Paasonen and others, 2018). Given that anesthesia causes profound disruptions of normal brain functions, it is not appropriate for most human studies, and that task and cognitive studies cannot be done under anesthesia, it is not a viable option for dealing with fidget-like behaviors for most experiments
As these fidgeting behaviors can only be stopped by anesthesia, the best way of dealing with them is detecting and accounting for these movements and behaviors. Fortunately, several recent technological advances have made the detection and quantification of these fidgeting behaviors easier. First, there have been large improvements in computer vision, specifically in its application to the high-throughput detection and quantification of behavior and movement in animals (Guo and others, 2015; Robie and others, 2017b). High speed cameras coupled with better computer vision algorithms can enable behavioral monitoring from multiple angles (Guo and others, 2015; Winder and others, 2017), as well as stereoscopic observation (Hong and others, 2015), allowing very sensitive tracking of body and limb movements (Machado and others, 2015; Giovannucci and others, 2018). As these technologies become standardized and commodified, behavioral monitoring of fidgeting will become easier. While there has been a recent push to monitor eye position and blinking in non-human primate fMRI studies (Chang and others, 2016), this sort of behavioral monitoring is not usually employed in human fMRI studies. Secondly, improvements in the miniaturization of electrodes for bioelectric potential monitoring will enable high resolution monitoring of EMG signals from muscles. Many of the technologies developed ostensibly for the monitoring of neural activity in the brain are easily adapted to monitoring muscles peripherally. For example, ‘neural dust’, small untethered electrodes that communicate via ultrasound, can be used to monitor electrical activity (Seo and others, 2016). Combined with improvements in wireless powering and transmission of signals (Kim and others, 2013; Szuts and others, 2011), these electrodes could be modified to perform high density monitoring of muscle activity throughout the body.
Detecting these fidget-driven responses in hemodynamic or other signals is the first step, the second step is determining their contributions to the observed neural and hemodynamic signals. The neuroimaging community has made large advances in data analysis techniques to remove systemic physiological signals from both humans and animals (Birn and others, 2014; Birn and others, 2009; Keilholz and others, 2017; Liu 2016; Murphy and others, 2013), and these techniques can be adapted to regressing out fidget-induced signals. While the quantitative relationship between the underlying neural activity and the hemodynamic response differs across brain regions (Devonshire and others, 2012; Handwerker and others, 2004; Huo and others, 2014), at least in somatosensory cortex, neurovascular coupling is constant across behaviors (Winder and others, 2017). Because the hemodynamic signal in the somatosensory cortex is highly correlated with movement (Huo and others, 2015a; Huo and others, 2015b; Huo and others, 2014), it is likely that these regression techniques will be able to ‘clean-up’ the signal in some brain regions to reveal neural dynamics driven by direct connections between brain regions. Recent work in awake mice have shown that dimensionality-reduction analysis techniques can separate out the components of neural activity that are correlated with spontaneous behaviors (Musall and others, 2018; Stringer and others, 2018). Once neural activity can be partitioned in such a way, the contributions of spontaneous fidgeting motions can be correctly accounted for.
Systems neuroscience has been increasingly concerned with the role of behavior, particularly natural behavior (Krakauer and others, 2017). This focus, coupled with better ethological big data analysis methods (Gao and Ganguli 2015; Gomez-Marin and others, 2014; Robie and others, 2017a; Wiltschko and others, 2015) has poised the field for large advances in relating neural activity (at multiple scales) to behavior. However, the role of ubiquitous and spontaneous fidget-like behaviors in generating brain-wide dynamics has been underappreciated. As the rate and timing of fidget-like behaviors will be impacted by common experimental manipulations and pathologies, the solution is to monitor these behaviors, and either subtract out or censor their effects. We argue that detailed monitoring of these spontaneous behaviors is an import step in understanding brain dynamics during whole-brain neural or hemodynamic imaging.
Acknowledgements:
We thank C. Echagarruga, X. Liu, K. Short, and N. Zhang for helpful discussions and comments on the manuscript
Funding: This work was supported by R01NS078168, RF1MH114224, and R01NS079737 from the NIH.
Footnotes
Conflict of Interest: None.
Bibliography
- Akeju O, Loggia ML, Catana C, Pavone KJ, Vazquez R, Rhee J and others 2014. Disruption of thalamic functional connectivity is a neural correlate of dexmedetomidine-induced unconsciousness. Elife 3:e04499. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Alkire MT, Haier RJ, Barker SJ, Shah NK, Wu JC, Kao YJ. 1995. Cerebral metabolism during propofol anesthesia in humans studied with positron emission tomography. Anesthesiology 82(2):393–403; discussion 27A. [DOI] [PubMed] [Google Scholar]
- Alkire MT, Haier RJ, Shah NK, Anderson CT. 1997. Positron emission tomography study of regional cerebral metabolism in humans during isoflurane anesthesia. Anesthesiology 86(3):549–557. [DOI] [PubMed] [Google Scholar]
- Allen WE, Kauvar IV, Chen MZ, Richman EB, Yang SJ, Chan K and others 2017. Global Representations of Goal-Directed Behavior in Distinct Cell Types of Mouse Neocortex. Neuron 94(4):891–907 e6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Birn RM, Bandettini PA, Cox RW, Shaker R. 1999. Event-related fMRI of tasks involving brief motion. Hum Brain Mapp 7(2):106–14. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Birn RM, Cornejo MD, Molloy EK, Patriat R, Meier TB, Kirk GR and others 2014. The influence of physiological noise correction on test-retest reliability of resting-state functional connectivity. Brain Connect 4(7):511–22. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Birn RM, Murphy K, Bandettini P. 2008a. The effect of respiration variations on independent component analysis results of resting state functional connectivity. Human brain mapping 29(7):740–750. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Birn RM, Murphy K, Handwerker Da, Bandettini Pa. 2009. fMRI in the presence of task-correlated breathing variations. NeuroImage 47(3):1092–1104. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Birn RM, Smith MA, Jones TB, Bandettini PA. 2008b. The respiration response function: the temporal dynamics of fMRI signal fluctuations related to changes in respiration. Neuroimage 40(2):644–654. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Blount WP. 1927. Studies of the Movements of the Eyelids of Animals: Blinking. Quarterly Journal of Experimental Physiology 18(2):111–125. [Google Scholar]
- Blumberg MS, Coleman CM, Sokoloff G, Weiner JA, Fritzsch B, McMurray B. 2015. Development of twitching in sleeping infant mice depends on sensory experience. Curr Biol 25(5):656–62. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Blumberg MS, Marques HG, Iida F. 2013. Twitching in sensorimotor development from sleeping rats to robots. Curr Biol 23(12):R532–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bobrov E, Wolfe J, Rao RP, Brecht M. 2014. The representation of social facial touch in rat barrel cortex. Current Biology 24:109–115. [DOI] [PubMed] [Google Scholar]
- Brenner N, Bialek W, de Ruyter van Steveninck R. 2000. Adaptive rescaling maximizes information transmission. Neuron 26(3):695–702. [DOI] [PubMed] [Google Scholar]
- Brenowitz EA, Zakon HH. 2015. Emerging from the bottleneck : benefits of the comparative approach to modern neuroscience. Trends in Neurosciences:1–6. [DOI] [PMC free article] [PubMed]
- Bright MG, Murphy K. 2015. Is fMRI “noise” really noise? Resting state nuisance regressors remove variance with network structure. NeuroImage 114:158–169. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bristow D, Frith C, Rees G. 2005a. Two distinct neural effects of blinking on human visual processing. Neuroimage 27(1):136–45. [DOI] [PubMed] [Google Scholar]
- Bristow D, Haynes JD, Sylvester R, Frith CD, Rees G. 2005b. Blinking suppresses the neural response to unchanging retinal stimulation. Curr Biol 15(14):1296–300. [DOI] [PubMed] [Google Scholar]
- Brown EN, Lydic R, Schiff ND. 2010. General anesthesia, sleep, and coma. N Engl J Med 363(27):2638–2650. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Campbell KS, Lakie M. 1998. A cross-bridge mechanism can explain the thixotropic short-range elastic component of relaxed frog skeletal muscle. Journal of Physiology-London 510(3):941–962. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ja Cardin, Schmidt MF. 2004. Noradrenergic inputs mediate state dependence of auditory responses in the avian song system. The Journal of neuroscience : the official journal of the Society for Neuroscience 24(35):7745–7753. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Carriere JS, Seli P, Smilek D. 2013. Wandering in both mind and body: individual differences in mind wandering and inattention predict fidgeting. Can J Exp Psychol 67(1):19–31. [DOI] [PubMed] [Google Scholar]
- Chang C, Glover GH. 2010. Time-frequency dynamics of resting-state brain connectivity measured with fMRI. NeuroImage 50(1):81–98. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chang C, Leopold DA, Scholvinck ML, Mandelkow H, Picchioni D, Liu X and others 2016. Tracking brain arousal fluctuations with fMRI. Proc Natl Acad Sci U S A 113(16):4518–23. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chapin JK, Woodward DJ. 1981. Modulation of sensory responsiveness of single somatosensory cortical cells during movement and arousal behaviors. Experimental neurology 72(1):164–178. [DOI] [PubMed] [Google Scholar]
- Chen S, Augustine GJ, Chadderton P. 2017a. Serial processing of kinematic signals by cerebellar circuitry during voluntary whisking. Nat Commun 8(1):232. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chen TW, Li N, Daie K, Svoboda K. 2017b. A Map of Anticipatory Activity in Mouse Motor Cortex. Neuron 94(4):866–879 e4. [DOI] [PubMed] [Google Scholar]
- Churchland MM, Cunningham JP, Kaufman MT, Foster JD, Nuyujukian P, Ryu SI and others 2012. Neural population dynamics during reaching. Nature 487(7405):51–56. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Churchland MM, Cunningham JP, Kaufman MT, Ryu SI, Shenoy KV. 2010. Cortical preparatory activity: representation of movement or first cog in a dynamical machine? Neuron 68(3):387–400. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Clack NG, O’Connor DH, Huber D, Petreanu L, Hires A, Peron S and others 2012. Automated tracking of whiskers in videos of head fixed rodents. PLoS Computational Biology 8(7):e1002591–e1002591. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Cooke SF, Komorowski RW, Kaplan ES, Gavornik JP, Bear MF. 2015. Visual recognition memory, manifested as long-term habituation, requires synaptic plasticity in V1. Nat Neurosci 18(2):262–71. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Corneil BD, Munoz DP. 2014. Overt responses during covert orienting. Neuron 82(6):1230–43. [DOI] [PubMed] [Google Scholar]
- Corneil BD, Olivier E, Richmond FJ, Loeb GE, Munoz DP. 2001. Neck muscles in the rhesus monkey. II. Electromyographic patterns of activation underlying postures and movements. J Neurophysiol 86(4):1729–49. [DOI] [PubMed] [Google Scholar]
- Couvy-Duchesne B, Blokland GA, Hickie IB, Thompson PM, Martin NG, de Zubicaray GI and others 2014. Heritability of head motion during resting state functional MRI in 462 healthy twins. Neuroimage 102 Pt 2:424–34. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Davenport PW, Reep RL, Thompson FJ. 2010. Phrenic nerve afferent activation of neurons in the cat SI cerebral cortex. J Physiol 588(Pt 5):873–86. [DOI] [PMC free article] [PubMed] [Google Scholar]
- de Kock CPJ, Sakmann B. 2009. Spiking in primary somatosensory cortex during natural whisking in awake head-restrained rats is cell-type specific. Proceedings of the National Academy of Sciences of the United States of America 106(38):16446–16450. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Desai M, Kahn I, Knoblich U, Bernstein J, Atallah H, Yang and others 2011. Mapping brain networks in awake mice using combined optical neural control and fMRI. Journal of Neurophysiology 105(3):1393–1405. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Devonshire IM, Papadakis NG, Port M, Berwick J, Kennerley AJ, Mayhew JEW and others 2012. Neurovascular coupling is brain region-dependent. NeuroImage 59(3):1997–2006. [DOI] [PubMed] [Google Scholar]
- Dombeck Da, Khabbaz AN, Collman F, Adelman TL, Tank DW. 2007. Imaging Large-Scale Neural Activity with Cellular Resolution in Awake, Mobile Mice. Neuron 56(1):43–57. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dotson NM, Hoffman SJ, Goodell B, Gray CM. 2017. A Large-Scale Semi-Chronic Microdrive Recording System for Non-Human Primates. Neuron 96(4):769–782 e2. [DOI] [PubMed] [Google Scholar]
- Drew PJ, Shih AY, Kleinfeld D. 2011. Fluctuating and sensory-induced vasodynamics in rodent cortex extend arteriole capacity. Proc Natl Acad Sci U S A 108(20):8473–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Engelhardt LE, Roe MA, Juranek J, DeMaster D, Harden KP, Tucker-Drob EM and others 2017. Children’s head motion during fMRI tasks is heritable and stable over time. Dev Cogn Neurosci 25:58–68. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fairhall aL, Lewen GD, Bialek W, de Ruyter Van Steveninck RR. 2001. Efficiency and ambiguity in an adaptive neural code. Nature 412(6849):787–792. [DOI] [PubMed] [Google Scholar]
- Feldman JL, Del Negro CA, Gray PA. 2013. Understanding the rhythm of breathing: so near, yet so far. Annu Rev Physiol 75:423–52. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ferenczi EA, Zalocusky KA, Liston C, Grosenick L, Warden MR, Amatya D and others 2016. Prefrontal cortical regulation of brainwide circuit dynamics and reward-related behavior. Science 351(6268):aac9698. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ferezou I, Haiss F, Gentet LJ, Aronoff R, Weber B, Petersen CCH. 2007. Spatiotemporal Dynamics of Cortical Sensorimotor Integration in Behaving Mice. Neuron 56(5):907–923. [DOI] [PubMed] [Google Scholar]
- Fox MD, Raichle ME. 2007. Spontaneous fluctuations in brain activity observed with functional magnetic resonance imaging. Nature reviews. Neuroscience 8(9):700–711. [DOI] [PubMed] [Google Scholar]
- Fox MD, Zhang D, Snyder AZ, Raichle ME. 2009. The global signal and observed anticorrelated resting state brain networks. Journal of neurophysiology 101(6):3270–3283. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Galton F. 1885. The Measure of Fidget. Natue:174–175.
- Ganguly K, Kleinfeld D. 2004. Goal-directed whisking increases phase-locking between vibrissa movement and electrical activity in primary sensory cortex in rat. Proceedings of the National Academy of Sciences of the United States of America 101(33):12348–12353. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gao P, Ganguli S. 2015. On simplicity and complexity in the brave new world of large-scale neuroscience. Current Opinion in Neurobiology 32:148–155. [DOI] [PubMed] [Google Scholar]
- Gao YR, Drew PJ. 2016. Effects of Voluntary Locomotion and Calcitonin Gene-Related Peptide on the Dynamics of Single Dural Vessels in Awake Mice. J Neurosci 36(8):2503–16. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gao YR, Greene SE, Drew PJ. 2015. Mechanical restriction of intracortical vessel dilation by brain tissue sculpts the hemodynamic response. Neuroimage 115:162–76. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gao YR, Ma Y, Zhang Q, Winder AT, Liang Z, Antinori L and others 2017. Time to wake up: Studying neurovascular coupling and brain-wide circuit function in the un-anesthetized animal. Neuroimage 153:382–398. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gawne TJ, Martin JM. 2000. Activity of primate V1 cortical neurons during blinks. J Neurophysiol 84(5):2691–4. [DOI] [PubMed] [Google Scholar]
- Gentet LJ, Avermann M, Matyas F, Staiger JF, Petersen CCH. 2010. Membrane potential dynamics of GABAergic neurons in the barrel cortex of behaving mice. Neuron 65(3):422–435. [DOI] [PubMed] [Google Scholar]
- Giovannucci A, Pnevmatikakis EA, Deverett B, Pereira T, Fondriest J, Brady MJ and others 2018. Automated gesture tracking in head-fixed mice. J Neurosci Methods 300:184–195. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Golan T, Davidesco I, Meshulam M, Groppe DM, Megevand P, Yeagle EM and others 2016. Human intracranial recordings link suppressed transients rather than ‘filling-in’ to perceptual continuity across blinks. Elife 5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gomez-Marin A, Paton JJ, Kampff AR, Costa RM, Mainen ZF. 2014. Big behavioral data: psychology, ethology and the foundations of neuroscience. Nat Neurosci 17(11):1455–62. [DOI] [PubMed] [Google Scholar]
- Gonzalez-Castillo J, Saad ZS, Handwerker Da, Inati SJ, Brenowitz N, Bandettini Pa. 2012. Whole-brain, time-locked activation with simple tasks revealed using massive averaging and model-free analysis. Proceedings of the National Academy of Sciences 109(14):5487–5492. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Goonetilleke SC, Katz L, Wood DK, Gu C, Huk AC, Corneil BD. 2015. Cross-species comparison of anticipatory and stimulus-driven neck muscle activity well before saccadic gaze shifts in humans and nonhuman primates. J Neurophysiol 114(2):902–13. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Grillner S. 2006. Biological Pattern Generation: The Cellular and Computational Logic of Networks in Motion. Neuron 52(5):751–766. [DOI] [PubMed] [Google Scholar]
- Grion N, Akrami A, Zuo Y, Stella F, Diamond ME. 2016. Coherence between Rat Sensorimotor System and Hippocampus Is Enhanced during Tactile Discrimination. PLoS Biol 14(2):e1002384. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gu C, Wood DK, Gribble PL, Corneil BD. 2016. A Trial-by-Trial Window into Sensorimotor Transformations in the Human Motor Periphery. Journal of Neuroscience 36(31):8273–8282. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Guipponi O, Odouard S, Pinede S, Wardak C, Ben Hamed S. 2014. fMRI Cortical Correlates of Spontaneous Eye Blinks in the Nonhuman Primate. Cerebral cortex (New York, NY : 1991). [DOI] [PubMed]
- Guo JZ, Graves AR, Guo WW, Zheng J, Lee A, Rodriguez-Gonzalez J and others 2015. Cortex commands the performance of skilled movement. Elife 4:e10774. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hamdy S, Mikulis DJ, Crawley A, Xue S, Lau H, Henry S and others 1999. Cortical activation during human volitional swallowing: an event-related fMRI study. Am J Physiol 277(1 Pt 1):G219–25. [DOI] [PubMed] [Google Scholar]
- Handwerker DA, Ollinger JM, D’Esposito M. 2004. Variation of BOLD hemodynamic responses across subjects and brain regions and their effects on statistical analyses. NeuroImage 21(4):1639–1651. [DOI] [PubMed] [Google Scholar]
- Hanks TD, Summerfield C. 2017. Perceptual Decision Making in Rodents, Monkeys, and Humans. Neuron 93(1):15–31. [DOI] [PubMed] [Google Scholar]
- Harris KD, Quiroga RQ, Freeman J, Smith SL. 2016. Improving data quality in neuronal population recordings. Nat Neurosci 19(9):1165–74. [DOI] [PMC free article] [PubMed] [Google Scholar]
- He BJ, Zempel JM, Snyder AZ, Raichle ME. 2010. The temporal structures and functional significance of scale-free brain activity. Neuron 66(3):353–369. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hill DN, Curtis JC, Moore JD, Kleinfeld D. 2011. Primary motor cortex reports efferent control of vibrissa motion on multiple timescales. Neuron 72(2):344–356. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hodgson K, Poldrack RA, Curran JE, Knowles EE, Mathias S, Goring HH and others 2016. Shared Genetic Factors Influence Head Motion During MRI and Body Mass Index. Cereb Cortex. [DOI] [PMC free article] [PubMed]
- Holland MK, Tarlow G. 1972. Blinking and mental load. Psychol Rep 31(1):119–27. [DOI] [PubMed] [Google Scholar]
- Hong W, Kennedy A, Burgos-Artizzu XP, Zelikowsky M, Navonne SG, Perona P and others 2015. Automated measurement of mouse social behaviors using depth sensing, video tracking, and machine learning. Proc Natl Acad Sci U S A 112(38):E5351–60. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Huijbers W, Van Dijk KR, Boenniger MM, Stirnberg R, Breteler MM. 2017. Less head motion during MRI under task than resting-state conditions. Neuroimage 147:111–120. [DOI] [PubMed] [Google Scholar]
- Huo BX, Gao YR, Drew PJ. 2015a. Quantitative separation of arterial and venous cerebral blood volume increases during voluntary locomotion. Neuroimage 105:369–79. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Huo BX, Greene SE, Drew PJ. 2015b. Venous cerebral blood volume increase during voluntary locomotion reflects cardiovascular changes. Neuroimage 118:301–12. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Huo BX, Smith JB, Drew PJ. 2014. Neurovascular coupling and decoupling in the cortex during voluntary locomotion. J Neurosci 34(33):10975–81. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hupe JM, Bordier C, Dojat M. 2012. A BOLD signature of eyeblinks in the visual cortex. Neuroimage 61(1):149–61. [DOI] [PubMed] [Google Scholar]
- Kalmbach aS, Waters J. 2012. Brain surface temperature under a craniotomy. Journal of Neurophysiology 108(11):3138–3146. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kaminer J, Powers AS, Horn KG, Hui C, Evinger C. 2011. Characterizing the spontaneous blink generator: an animal model. J Neurosci 31(31):11256–67. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Karson CN. 1979. Oculomotor signs in a psychiatric population: a preliminary report. Am J Psychiatry 136(8):1057–60. [DOI] [PubMed] [Google Scholar]
- Karson CN. 1983. Spontaneous eye-blink rates and dopaminergic systems. Brain 106 (Pt 3):643–53. [DOI] [PubMed] [Google Scholar]
- Karson CN, Dykman RA, Paige SR. 1990. Blink rates in schizophrenia. Schizophr Bull 16(2):345–54. [DOI] [PubMed] [Google Scholar]
- Kaufman MT, Churchland MM, Ryu SI, Shenoy KV. 2014. Cortical activity in the null space: permitting preparation without movement. Nat Neurosci 17(3):440–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Keilholz SD, Pan WJ, Billings J, Nezafati M, Shakil S. 2017. Noise and non-neuronal contributions to the BOLD signal: applications to and insights from animal studies. Neuroimage 154:267–281. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Khazali MF, Pomper JK, Smilgin A, Bunjes F, Thier P. 2016. A new motor synergy that serves the needs of oculomotor and eye lid systems while keeping the downtime of vision minimal. Elife 5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kim TIT-i, McCall JG, Jung YH, Huang X, Siuda ER, Li Y and others 2013. Injectable, Cellular-Scale Optoelectronics with Applications for Wireless Optogenetics. Science 340(6129):211–216. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kleinfeld D, Ahissar E, Diamond ME. 2006. Active sensation: insights from the rodent vibrissa sensorimotor system. Current Opinion in Neurobiology 16(4):435–444. [DOI] [PubMed] [Google Scholar]
- Kleinfeld D, Deschênes M. 2011. Neuronal basis for object location in the vibrissa scanning sensorimotor system. Neuron 72(3):455–468. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Knutsen PM, Mateo C, Kleinfeld D. 2016. Precision mapping of the vibrissa representation within murine primary somatosensory cortex. Philos Trans R Soc Lond B Biol Sci 371(1705). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Komiyama T, Sato TR, Connor DHO, Zhang Y-X, Huber D, Hooks BM and others 2010. Learning-related fine-scale specificity imaged in motor cortex circuits of behaving mice. Nature 464(7292):1182–1186. [DOI] [PubMed] [Google Scholar]
- Krakauer JW, Ghazanfar AA, Gomez-Marin A, MacIver MA, Poeppel D. 2017. Neuroscience Needs Behavior: Correcting a Reductionist Bias. Neuron 93(3):480–490. [DOI] [PubMed] [Google Scholar]
- Kurnikova A, Moore JD, Liao SM, Deschenes M, Kleinfeld D. 2017. Coordination of Orofacial Motor Actions into Exploratory Behavior by Rat. Curr Biol 27(5):688–696. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lakie M, Robinson LG. 1988. Thixotropic changes in human muscle stiffness and the effects of fatigue. Experimental Physiology 73(4):487–500. [DOI] [PubMed] [Google Scholar]
- Lakie M, Robson LG. 1988. Thixotropy: stiffness recovery rate in relaxed frog muscle. Q J Exp Physiol 73:237–239. [DOI] [PubMed] [Google Scholar]
- Lear CS, Flanagan JB Jr., Moorrees CF. 1965. The Frequency of Deglutition in Man. Arch Oral Biol 10:83–100. [DOI] [PubMed] [Google Scholar]
- Lenschow C, Brecht M. 2015. Barrel Cortex Membrane Potential Dynamics in Social Touch. Neuron:1–20. [DOI] [PubMed]
- Da Leopold, Murayama Y, Logothetis NK. 2003. Very slow activity fluctuations in monkey visual cortex: implications for functional brain imaging. Cerebral cortex (New York, N.Y. : 1991) 13(4):422–433. [DOI] [PubMed] [Google Scholar]
- Lestienne F, Vidal PP, Berthoz A. 1984. Gaze changing behaviour in head restrained monkey. Exp Brain Res 53(2):349–56. [DOI] [PubMed] [Google Scholar]
- Letourneur A, Chen V, Waterman G, Drew PJ. 2014. A method for longitudinal, transcranial imaging of blood flow and remodeling of the cerebral vasculature in postnatal mice. Physiol Rep 2(12):e12238–e12238. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Levy DE, Sidtis JJ, Rottenberg DA, Jarden JO, Strother SC, Dhawan V and others 1987. Differences in cerebral blood flow and glucose utilization in vegetative versus locked-in patients. Ann Neurol 22(6):673–82. [DOI] [PubMed] [Google Scholar]
- Lewis LD, Weiner VS, Mukamel EA, Donoghue JA, Eskandar EN, Madsen JR and others 2012. Rapid fragmentation of neuronal networks at the onset of propofol-induced unconsciousness. Proc Natl Acad Sci U S A 109(49):E3377–86. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Li JM, Bentley WJ, Snyder LH. 2015. Functional connectivity arises from a slow rhythmic mechanism. Proceedings of the National Academy of Sciences of the United States of America 2015. [DOI] [PMC free article] [PubMed]
- Li P, Janczewski WA, Yackle K, Kam K, Pagliardini S, Krasnow MA and others 2016. The peptidergic control circuit for sighing. Nature 530(7590):293–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liang Z, King J, Zhang N. 2012. Anticorrelated resting-state functional connectivity in awake rat brain. Neuroimage 59(2):1190–9. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liang Z, Liu X, Zhang N. 2015. Dynamic resting state functional connectivity in awake and anesthetized rodents. Neuroimage 104:89–99. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liu JV, Hirano Y, Nascimento GC, Stefanovic B, Leopold DA, Silva AC. 2013. fMRI in the awake marmoset: Somatosensory-evoked responses, functional connectivity, and comparison with propofol anesthesia. NeuroImage 78(C):186–195. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liu TT. 2016. Noise contributions to the fMRI signal: An overview. Neuroimage 143:141–151. [DOI] [PubMed] [Google Scholar]
- Liu X, de Zwart JA, Scholvinck ML, Chang C, Ye FQ, Leopold DA and others 2018. Subcortical evidence for a contribution of arousal to fMRI studies of brain activity. Nat Commun 9(1):395. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liu X, Zhu XH, Zhang Y, Chen W. 2011. Neural origin of spontaneous hemodynamic fluctuations in rats under burst-suppression anesthesia condition. Cerebral Cortex 21(2):374–384. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lotze M, Erb M, Flor H, Huelsmann E, Godde B, Grodd W. 2000. fMRI evaluation of somatotopic representation in human primary motor cortex. Neuroimage 11(5 Pt 1):473–81. [DOI] [PubMed] [Google Scholar]
- Lyons DG, Parpaleix A, Roche M, Charpak S. 2016. Mapping oxygen concentration in the awake mouse brain. Elife 5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ma Y, Shaik MA, Kozberg MG, Kim SH, Portes JP, Timerman D and others 2016. Resting-state hemodynamics are spatiotemporally coupled to synchronized and symmetric neural activity in excitatory neurons. Proc Natl Acad Sci U S A 113(52):E8463–E8471. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Machado AS, Darmohray DM, Fayad J, Marques HG, Carey MR. 2015. A quantitative framework for whole-body coordination reveals specific deficits in freely walking ataxic mice. Elife 4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Macrides F, Eichenbaum HB, Forbes WB. 1982. Temporal relationship between sniffing and the limbic theta rhythm during odor discrimination reversal learning. Journal of Neuroscience 2(12):1705–17. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Marder E. 2012. Neuromodulation of Neuronal Circuits: Back to the Future. Neuron 76(1):1–11. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Martin C, Berwick J, Johnston D, Zheng Y, Martindale J, Port M and others 2002. Optical imaging spectroscopy in the unanaesthetised rat. Journal of Neuroscience Methods 120(1):25–34. [DOI] [PubMed] [Google Scholar]
- Martin RE, Goodyear BG, Gati JS, Menon RS. 2001. Cerebral cortical representation of automatic and volitional swallowing in humans. J Neurophysiol 85(2):938–50. [DOI] [PubMed] [Google Scholar]
- Meier JD, Aflalo TN, Kastner S, Graziano MS. 2008. Complex organization of human primary motor cortex: a high-resolution fMRI study. J Neurophysiol 100(4):1800–12. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mihai PG, Otto M, Platz T, Eickhoff SB, Lotze M. 2014. Sequential evolution of cortical activity and effective connectivity of swallowing using fMRI. Hum Brain Mapp 35(12):5962–73. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Miller AJ. 1978. Spectral analysis of the electromyogram of the temporal muscle in the rhesus monkey (Macaca mulatta). Electroencephalogr Clin Neurophysiol 44(3):317–27. [DOI] [PubMed] [Google Scholar]
- Moeller S, Nallasamy N, Tsao DY, Freiwald WA. 2009. Functional connectivity of the macaque brain across stimulus and arousal states. Journal of Neuroscience 29(18):5897–5909. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mohajerani MH, Chan AW, Mohsenvand M, Ledue J, Liu R, McVea DA and others 2013. Spontaneous cortical activity alternates between motifs defined by regional axonal projections. Nature Neuroscience:1–13. [DOI] [PMC free article] [PubMed]
- Moore JD, Deschênes M, Furuta T, Huber D, Smear MC, Demers M and others 2013. Hierarchy of orofacial rhythms revealed through whisking and breathing. Nature 497:205–210. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Moore JD, Mercer Lindsay N, Deschenes M, Kleinfeld D. 2015. Vibrissa Self-Motion and Touch Are Reliably Encoded along the Same Somatosensory Pathway from Brainstem through Thalamus. PLoS Biol 13(9):e1002253. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Murphy K, Birn RM, Bandettini PA. 2013. Resting-state fMRI confounds and cleanup. NeuroImage 80(C):349–359. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Murphy K, Birn RM, Handwerker DA, Jones TB, Bandettini PA. 2009. The impact of global signal regression on resting state correlations: are anti-correlated networks introduced? NeuroImage 44(3):893–905. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Murphy TH, Boyd JD, Bolanos F, Vanni MP, Silasi G, Haupt D and others 2016. High-throughput automated home-cage mesoscopic functional imaging of mouse cortex. Nat Commun 7:11611. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Musall S, Kaufman MT, Gluf S, Churchland AK. 2018. Movement-related activity dominates cortex during sensory-guided decision making. bioArXiV.
- Nakamori K, Odawara M, Nakajima T, Mizutani T, Tsubota K. 1997. Blinking is controlled primarily by ocular surface conditions. American Journal of Ophthalmology 124(1):24–30. [DOI] [PubMed] [Google Scholar]
- Nakano T, Kato M, Morito Y, Itoi S, Kitazawa S. 2013. Blink-related momentary activation of the default mode network while viewing videos. Proc Natl Acad Sci U S A 110(2):702–6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nakano T, Yamamoto Y, Kitajo K, Takahashi T, Kitazawa S. 2009. Synchronization of spontaneous eyeblinks while viewing video stories. Proc Biol Sci 276(1673):3635–44. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nallasamy N, Tsao DY. 2011. Functional connectivity in the brain: effects of anesthesia. The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry 17(1):94–106. [DOI] [PubMed] [Google Scholar]
- Nimmerjahn A, Mukamel EA, Schnitzer MJ. 2009. Motor Behavior Activates Bergmann Glial Networks. Neuron 62(3):400–412. [DOI] [PMC free article] [PubMed] [Google Scholar]
- O’Connor DH, Huber D, Svoboda K. 2009. Reverse engineering the mouse brain. Nature 461(7266):923–929. [DOI] [PubMed] [Google Scholar]
- O’Connor DH, Peron SP, Huber D, Svoboda K. 2010. Neural activity in barrel cortex underlying vibrissa-based object localization in mice. Neuron 67(6):1048–1061. [DOI] [PubMed] [Google Scholar]
- O’Connor SM, Berg RW, Kleinfeld D. 2002. Coherent electrical activity between vibrissa sensory areas of cerebellum and neocortex is enhanced during free whisking. Journal of neurophysiology 87(4):2137–2148. [DOI] [PubMed] [Google Scholar]
- Paasonen J, Stenroos P, Salo RA, Kiviniemi V, Grohn O. 2018. Functional connectivity under six anesthesia protocols and the awake condition in rat brain. Neuroimage 172:9–20. [DOI] [PubMed] [Google Scholar]
- Parabucki A, Lampl I. 2017. Volume Conduction Coupling of Whisker-Evoked Cortical LFP in the Mouse Olfactory Bulb. Cell Rep 21(4):919–925. [DOI] [PubMed] [Google Scholar]
- Payne HL, Raymond JL. 2017. Magnetic eye tracking in mice. Elife 6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Petersen CCH. 2007. The functional organization of the barrel cortex. Neuron 56(2):339–355. [DOI] [PubMed] [Google Scholar]
- Pisauro MA, Dhruv NT, Carandini M, Benucci A. 2013. Fast hemodynamic responses in the visual cortex of the awake mouse. The Journal of neuroscience : the official journal of the Society for Neuroscience 33(46):18343–51. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Powell K, Mathy A, Duguid I, Hausser M. 2015. Synaptic representation of locomotion in single cerebellar granule cells. Elife 4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Power JD, Barnes KA, Snyder AZ, Schlaggar BL, Petersen SE. 2012. Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion. Neuroimage 59(3):2142–54. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Power JD, Mitra A, Laumann TO, Snyder AZ, Schlaggar BL, Petersen SE. 2014. Methods to detect, characterize, and remove motion artifact in resting state fMRI. NeuroImage 84:320–341. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Power JD, Plitt M, Laumann TO, Martin A. 2017. Sources and implications of whole-brain fMRI signals in humans. Neuroimage 146:609–625. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Pruszynski JA, King GL, Boisse L, Scott SH, Flanagan JR, Munoz DP. 2010. Stimulus-locked responses on human arm muscles reveal a rapid neural pathway linking visual input to arm motor output. Eur J Neurosci 32(6):1049–57. [DOI] [PubMed] [Google Scholar]
- Rinberg D, Koulakov A, Gelperin A. 2006. Sparse odor coding in awake behaving mice. Journal of Neuroscience 26(34):8857–8865. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ritt JT, Andermann ML, Moore CI. 2008. Embodied Information Processing: Vibrissa Mechanics and Texture Features Shape Micromotions in Actively Sensing Rats. Neuron 57(4):599–613. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Robie AA, Hirokawa J, Edwards AW, Umayam LA, Lee A, Phillips ML and others 2017a. Mapping the Neural Substrates of Behavior. Cell 170(2):393–406 e28. [DOI] [PubMed] [Google Scholar]
- Robie AA, Seagraves KM, Egnor SE, Branson K. 2017b. Machine vision methods for analyzing social interactions. J Exp Biol 220(Pt 1):25–34. [DOI] [PubMed] [Google Scholar]
- Satterthwaite TD, Ciric R, Roalf DR, Davatzikos C, Bassett DS, Wolf DH. 2017. Motion artifact in studies of functional connectivity: Characteristics and mitigation strategies. Hum Brain Mapp [DOI] [PMC free article] [PubMed]
- Satterthwaite TD, Wolf DH, Loughead J, Ruparel K, Elliott MA, Hakonarson H and others 2012. Impact of in-scanner head motion on multiple measures of functional connectivity: relevance for studies of neurodevelopment in youth. Neuroimage 60(1):623–32. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Scholvinck ML, Maier A, Ye FQ, Duyn JH, Leopold DA. 2010. Neural basis of global resting-state fMRI activity. Proceedings of the National Academy of Sciences 107(22):10238–10243. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Seli P, Carriere JS, Thomson DR, Cheyne JA, Martens KA, Smilek D. 2014. Restless mind, restless body. J Exp Psychol Learn Mem Cogn 40(3):660–8. [DOI] [PubMed] [Google Scholar]
- Seo D, Neely RM, Shen K, Singhal U, Alon E, Rabaey JM and others 2016. Wireless Recording in the Peripheral Nervous System with Ultrasonic Neural Dust. Neuron 91(3):529–39. [DOI] [PubMed] [Google Scholar]
- Shirey MJ, Smith JB, Kudlik DE, Huo BX, Greene SE, Drew PJ. 2015. Brief anesthesia, but not voluntary locomotion, significantly alters cortical temperature. J Neurophysiol 114(1):309–22. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Siegel JS, Mitra A, Laumann TO, Seitzman BA, Raichle M, Corbetta M and others 2016. Data Quality Influences Observed Links Between Functional Connectivity and Behavior. Cereb Cortex. [DOI] [PMC free article] [PubMed]
- Sreenivasan V, Esmaeili V, Kiritani T, Galan K, Crochet S, Petersen CCH. 2016. Movement Initiation Signals in Mouse Whisker Motor Cortex. Neuron 92(6):1368–1382. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Stern JA, Boyer D, Schroeder D. 1994. Blink rate: a possible measure of fatigue. Hum Factors 36(2):285–97. [DOI] [PubMed] [Google Scholar]
- Stern JA, Walrath LC, Goldstein R. 1984. The endogenous eyeblink. Psychophysiology 21(1):22–33. [DOI] [PubMed] [Google Scholar]
- Stringer C, Pachitariu M, Steinmetz N, Bai Reddy C, Carandini M, Harris KD. 2018. Spontaneous behaviors drive multidimensional, brain-wide population activity. bioArXiV. [DOI] [PMC free article] [PubMed]
- Szuts TA, Fadeyev V, Kachiguine S, Sher A, Grivich MV, Agrochão M and others 2011. A wireless multi-channel neural amplifier for freely moving animals. Nature Neuroscience 14(2):263–269. [DOI] [PubMed] [Google Scholar]
- Tamura T, Kanayama T, Yoshida S, Kawasaki T. 2003. Functional magnetic resonance imaging of human jaw movements. J Oral Rehabil 30(6):614–22. [DOI] [PubMed] [Google Scholar]
- Thrane aS, Thrane VR, Zeppenfeld D, Lou N, Xu Q, Nagelhus Ea and others 2012. General anesthesia selectively disrupts astrocyte calcium signaling in the awake mouse cortex. Proceedings of the National Academy of Sciences 109(46):18974–18979. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tiriac A, Uitermarkt BD, Fanning AS, Sokoloff G, Blumberg MS. 2012. Rapid whisker movements in sleeping newborn rats. Curr Biol 22(21):2075–80. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Turchi J, Chang C, Ye FQ, Russ BE, Yu DK, Cortes CR and others 2018. The Basal Forebrain Regulates Global Resting-State fMRI Fluctuations. Neuron 97(4):940–952 e4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Urbain N, Salin PA, Libourel PA, Comte JC, Gentet LJ, Petersen CC. 2015. Whisking-Related Changes in Neuronal Firing and Membrane Potential Dynamics in the Somatosensory Thalamus of Awake Mice. Cell Rep 13(4):647–56. [DOI] [PubMed] [Google Scholar]
- Vallentin D, Kosche G, Lipkind D, Long MA. 2016. Neural circuits. Inhibition protects acquired song segments during vocal learning in zebra finches. Science 351(6270):267–71. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Van Dijk KR, Sabuncu MR, Buckner RL. 2012. The influence of head motion on intrinsic functional connectivity MRI. Neuroimage 59(1):431–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Van Orden KF, Limbert W, Makeig S, Jung TP. 2001. Eye activity correlates of workload during a visuospatial memory task. Hum Factors 43(1):111–21. [DOI] [PubMed] [Google Scholar]
- Vernooij CA, Reynolds RF, Lakie M. 2016. Physiological tremor reveals how thixotropy adapts skeletal muscle for posture and movement. R Soc Open Sci 3(5):160065. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wesson DW, Donahou TN, Johnson MO, Wachowiak M. 2008. Sniffing behavior of mice during performance in odor-guided tasks. Chem Senses 33(7):581–96. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wiltschko AB, Johnson MJ, Iurilli G, Peterson RE, Katon JM, Pashkovski SL and others 2015. Mapping Sub-Second Structure in Mouse Behavior. Neuron 88(6):1121–35. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Winder AT, Echagarruga C, Zhang Q, Drew PJ. 2017. Weak correlations between hemodynamic signals and ongoing neural activity during the resting state. Nat Neurosci 20(12):1761–1769. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wong CW, Olafsson V, Tal O, Liu TT. 2013. The amplitude of the resting-state fMRI global signal is related to EEG vigilance measures. NeuroImage 83(C):983–990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wood DK, Gu C, Corneil BD, Gribble PL, Goodale MA. 2015. Transient visual responses reset the phase of low-frequency oscillations in the skeletomotor periphery. Eur J Neurosci 42(3):1919–32. [DOI] [PubMed] [Google Scholar]
- Xie L, Kang H, Xu Q, Chen MJ, Liao Y, Thiyagarajan M and others 2013. Sleep drives metabolite clearance from the adult brain. Science 342(6156):373–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Xie Y, Chan AW, McGirr A, Xue S, Xiao D, Zeng H and others 2016. Resolution of High-Frequency Mesoscale Intracortical Maps Using the Genetically Encoded Glutamate Sensor iGluSnFR. J Neurosci 36(4):1261–72. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yackle K, Schwarz LA, Kam K, Sorokin JM, Huguenard JR, Feldman JL and others 2017. Breathing control center neurons that promote arousal in mice. Science 355(6332):1411–1415. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yan CG, Cheung B, Kelly C, Colcombe S, Craddock RC, Di Martino A and others 2013. A comprehensive assessment of regional variation in the impact of head micromovements on functional connectomics. Neuroimage 76:183–201. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yuan H, Zotev V, Phillips R, Bodurka J. 2013. Correlated slow fluctuations in respiration, EEG, and BOLD fMRI. Neuroimage 79:81–93. [DOI] [PubMed] [Google Scholar]
- Zeng LL, Wang D, Fox MD, Sabuncu M, Hu D, Ge M and others 2014. Neurobiological basis of head motion in brain imaging. Proc Natl Acad Sci U S A 111(16):6058–62. [DOI] [PMC free article] [PubMed] [Google Scholar]