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. Author manuscript; available in PMC: 2020 Apr 2.
Published in final edited form as: Biochemistry. 2019 Mar 12;58(13):1718–1727. doi: 10.1021/acs.biochem.8b01309

Table 1.

Data collection and refinement statistics for the structure of the olfactomedin (OLF) domain of mouse myocilin, PDB 6NAX.

Data Collection
Space group P4
Cell dimensions
a, b, c (Å) 112.0, 112.0, 44.1
α, β, γ (degrees) 90, 90, 90
Resolution (Å) 33.11 – 1.55 (1.61 – 1.55)
Reflections
Total 355,190 (29,541)
Unique 79,283 (7,499)
Redundancy 4.5 (3.9)
Completeness (%) 98.5 (95.2)
Wilson B-factor 11.6
Rsym 0.0671 (0.210)
I/Iσ 18.0 (6.1)
CC1/2 0.996 (0.950)
CC* 0.999 (0.987)

Refinement

Resolution (Å) 33.11 – 1.55 (1.61 – 1.55)
Reflections
Used in refinement 78,413 (7,499)
Used for R-free 2,000 (193)
R-work/R-free 0.158 (0.173) / 0.178 (0.201)
CC (work) / CC (free) 0.968 (0.934) / 0.970 (0.916)
Molecules
Protein residues 518
Ligands 29
Solvent 623
B-factor: average 15.0
Protein residues 13.2
Ligands 26.8
Solvent 26.3
RMS
Bond-lengths (Å) 0.01
Bond-lengths (deg) 0.88
Ramachandran
Favored (%) 96.69
Allowed (%) 3.31
Outliers (%) 0
Clashscore 3.58