Table 3.

Real datasets summary whole genome (AUC)

Sample	SNV/InDel	OVarCall	OHVarfinDer	HapMuC	Strelka	MuTect	VarScan2	#SNV/InDel	#Error
HCC1143_n20t80	SNV	0.869	0.906	0.827	0.873	0.848	0.801	10 618	2327
HCC1143_n40t60		0.870	0.901	0.824	0.877	0.855	0.799	8517	2049
HCC1143_n60t40		0.884	0.912	0.843	0.901	0.876	0.814	5450	1684
HCC1143_n80t20		0.901	0.941	0.870	0.938	0.918	0.830	1874	1451
HCC1954_n20t80		0.882	0.934	0.852	0.903	0.869	0.862	10 653	2854
HCC1954_n40t60		0.893	0.941	0.852	0.917	0.880	0.858	7969	2327
HCC1954_n60t40		0.917	0.949	0.865	0.937	0.905	0.852	4638	1770
HCC1954_n80t20		0.941	0.970	0.880	0.972	0.942	0.848	1389	1404
Total		0.895	0.935	0.860	0.913	0.886	0.852	51 108	15 866
HCC1143_n20t80	InDel	0.707	0.796	0.678	0.713	—	0.722	926	4951
HCC1143_n40t60		0.733	0.814	0.700	0.755	—	0.748	617	4761
HCC1143_n60t40		0.760	0.834	0.723	0.784	—	0.778	328	4563
HCC1143_n80t20		0.809	0.855	0.770	0.816	—	0.800	94	4899
HCC1954_n20t80		0.800	0.860	0.771	0.822	—	0.825	1771	5219
HCC1954_n40t60		0.821	0.866	0.778	0.843	—	0.835	1172	5215
HCC1954_n60t40		0.819	0.863	0.770	0.848	—	0.831	607	5200
HCC1954_n80t20		0.815	0.887	0.777	0.864	—	0.823	159	5053
Total		0.777	0.838	0.774	0.794	—	0.792	5674	39 861

The highest AUC values are written in italic letters.