Correction to: BMC Hematol (2014) 14:4
https://doi.org/10.1186/2052-1839-14-4
The copy number of the HBA1 assay for the -(α)20.5 deletion in the HBA-CNV method described in the original article [1] was incorrectly reported. The authors wish to note that the HBA1 assay will not be affected by the –(α)20.5 deletion and will show two copies (Table 1 - corrected). The 3′ breakpoint of the –(α)20.5 deletion is located within exon 2 of the HBA1 gene [2], leaving intact the area where the HBA1 assay is amplifying. The partial deletion of HBA1 causes a complete abolition of the gene expression, hence –(α)20.5 is considered as a double gene deletion. This shows that even though the HBA1 assay may show two copies, a deletion affecting both alpha-globin genes can not be excluded. Similarly, the Hb Var database contains examples of deletions that will not influence HBA2 assay copy number despite affecting both alpha-globin genes. Hence, molecular data should always be evaluated together with hematological data.
Table 1.
Predicted copy number in 108 patient samples
| Genotype | Samples (n) | Copy Number Predicted | |||
|---|---|---|---|---|---|
| HBA1 | HBA3.7 | HBA2 | HS-40 | ||
| αα/αα | 63 | 2 | 2 | 2 | 2 |
| -α3.7/αα | 22 | 2 | 1 | 2 | 2 |
| -α4.2/αα | 2 | 2 | 2 | 1 | 2 |
| -α3.7/-α3.7 | 8 | 2 | 0 | 2 | 2 |
| --SEA/αα | 7 | 1 | 1 | 1 | 2 |
| --FIL/αα | 1 | 1 | 1 | 1 | 2 |
| -(α)20.5/αα | 1 | 2 | 1 | 1 | 2 |
| --MED/αα | 1 | 1 | 1 | 1 | 2 |
| -α3.7/--SEA | 1 | 1 | 0 | 1 | 2 |
| αα/αααanti3.7 | 2 | 2 | 3 | 2 | 2 |
| Total | 108 | ||||
References
- 1.Runa M, Grimholt RM, Urdal P, Piehler AP. Rapid and reliable detection of α-globin copy number variations by quantitative real-time PCR. BMC Hematol. 2014;14:4. doi: 10.1186/2052-1839-14-4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 2.Nicholls RD, Higgs DR, Clegg JB, Weatherall DJ. Alpha zero-thalassemia due to recombination between the alpha 1-globin gene and an AluI repeat. Blood. 1985;65(6):1434–1438. doi: 10.1182/blood.V65.6.1434.bloodjournal6561434. [DOI] [PubMed] [Google Scholar]
