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. 2019 Aug 14;138(4):379–388. doi: 10.1111/pbr.12744

A decade of Tropical Legumes projects: Development and adoption of improved varieties, creation of market‐demand to benefit smallholder farmers and empowerment of national programmes in sub‐Saharan Africa and South Asia

Rajeev K Varshney 1,, Chris Ojiewo 2, Emmanuel Monyo 2
PMCID: PMC6853253  PMID: 31762525

Abstract

This article highlights 12 years (2007–2019) of research, achievements, lessons learned, challenges and gaps in discovery‐to‐delivery research in legumes emanating from three projects, collectively called Tropical Legumes (TL) with a total investment of about US$ 67 million funded by the Bill & Melinda Gates Foundation. These projects were implemented by three CGIAR centres (ICRISAT, CIAT and IITA) together with 15 national agricultural research system partners in sub‐Saharan Africa and South Asia. The TL projects together with some of their precursors and complementary projects from other agencies, facilitated the development of 266 improved legume varieties and the production of about 497,901 tons of certified seeds of the target legume crops in the focus countries. The certified seeds have been planted on about 5.0 million ha by more than 25 million smallholder farmers in the 15 countries and beyond, producing about 6.1 million tons of grain worth US$ 3.2 billion. Furthermore, the projects also trained 52 next generation scientists that included 10 women, by supporting 34 Masters degrees and 18 PhD degrees.

Keywords: breeding, food security, genomics, legumes, seed system

1. INTRODUCTION

The Tropical Legumes (TL) projects supported by the Bill & Melinda Gates Foundation (BMGF) were jointly implemented by three CGIAR Centres (ICRISAT, CIAT and IITA) together with 15 national agricultural research system (NARS) partners in select focus countries (Figure 1). The projects ran in three phases: – TL II Phase I (2007–2011, US$ 20.603 million), TL II Phase II (2012–2014, US$ 21.420 million) and Phase III or TL III (2015–2019, US$ 24.970 million). The projects aimed to improve the livelihoods of smallholder farmers in drought‐prone areas of Sub‐Saharan Africa (SSA) and South Asia (SA) through improved productivity and production of six major grain legume crops – chickpea (Cicer arietinum), common bean (Phaseolus vulgaris), cowpea (Vigna unguiculata), groundnut (Arachis hypogaea), pigeonpea (Cajanus cajan) and soybean (Glycine max). The project activities were implemented in Burkina Faso, Ghana, Mali, Niger, Nigeria, Senegal, Ethiopia, Kenya, Malawi, Mozambique, Tanzania, Uganda and Zimbabwe in SSA and India and Bangladesh in SA (Figure 1).

Figure 1.

Figure 1

Tropical Legumes (TL) crops and geographies. Phases I and II of TL II projects conducted research and development activities on six legume crops, namely chickpea, common bean, cowpea, groundnut, pigeonpea and soybean. The TL III project focused on four crops, i.e., chickpea, common bean, cowpea and groundnut. In terms of geographies, TL II phase I had project activities in 15 countries, namely Burkina Faso, Ghana, Mali, Niger, Nigeria, Senegal, Ethiopia, Kenya, Malawi, Mozambique, Tanzania, Uganda and Zimbabwe in sub‐Saharan Africa (SSA) and India and Bangladesh in South Asia (SA), while phase II involved all the above mentioned countries except Senegal. TL III focused on seven countries in SSA (Burkina Faso, Ghana, Mali, Nigeria, Ethiopia, Tanzania and Uganda) and the Uttar Pradesh state of India in SA [Colour figure can be viewed at http://www.wileyonlinelibrary.com]

While Phases I and II of the project focussed on research and development activities in six target legume crops, Senegal was the only country that was dropped in Phase II. TL III strategically focused on fewer crops (chickpea, common bean, cowpea and groundnut) and fewer geographies (Burkina Faso, Ghana, Mali, Nigeria, Ethiopia, Tanzania and Uganda; and Uttar Pradesh state of India). It also aimed to fundamentally strengthen the NARS and CGIAR's breeding programmes and seed platforms to enhance their ability to deliver high and sustained technology outputs to smallholder farmers. Capacity building remained an important component of the three phases.

This special issue of Plant Breeding showcases the efforts and advances made in the six legume crops through TL and other associated projects. The issue includes eight reviews and perspective articles from leading researchers engaged in the TL projects and an invited article on faba bean. The issue highlights the advances made in the areas of genetics, genomics and deployment of integrated breeding approaches for developing improved drought‐ and heat‐ tolerant and biotic stress‐resistant varieties in the target legume crops. Furthermore, market‐led options to scale up legume seeds in developing countries have also been presented in an article. A snapshot of these articles as well as a summary and perspectives from the Guest Editors including Rajeev K. Varshney, the Principal Investigator (2013–2019); Chris Ojiewo, Project Coordinator (2017–2019) and Emmanuel Monyo, Project Coordinator (2012–2016) are presented in this article.

2. CHICKPEA ‐ ADAPTATION TO DROUGHT AND HEAT STRESSES

In the face of diminishing rainfall and increasing temperatures globally, developing drought‐ and heat‐tolerant chickpea varieties becomes imperative considering that chickpea is one of the important legume crops largely grown by smallholder farmers who are more susceptible to climate variability and change. Therefore, efforts were made to develop several early‐maturing (drought escaping) varieties with improved drought tolerance by selecting for grain yield under moisture stress conditions. Similarly, selection for pod set in the crop subjected to heat stress during the reproductive stage has helped in developing heat‐tolerant varieties. In parallel, significant advances were made in decoding the chickpea genome (Varshney, Song, et al., 2013), sequencing several hundred germplasm lines and varieties (Varshney, Thudi, et al., 2019), developing genetic and physical maps and identifying quantitative trait loci (QTLs) including “QTL‐hotspot” region containing QTLs for several drought tolerance traits. Some of these efforts were partially supported by TL projects as well as the CGIAR Generation Challenge Programme. In the TL projects, the “QTL‐hotspot” region was also introgressed into several popular cultivars using marker‐assisted backcrossing (MABC) and introgression lines giving significantly higher yield than the popular cultivars (Thudi et al., 2014; Varshney, Gaur, et al., 2013). Similarly, molecular breeding has been used successfully to develop resistant lines for Fusarium wilt and ascochyta blight resistance (Mannur et al., 2019; Pratap et al., 2017; Varshney, Mohan, et al., 2014). During the three phases of the project, 28 chickpea varieties were developed and released and 259,552 tons of certified seeds of modern improved varieties were produced and planted on about 2.2 million ha (Table 1). Some of these achievements have been presented in detail by Gaur et al. (2019) in this issue.

Table 1.

Varieties released, seed production and area covered under TL projects (2007–2017) with contributions and the support of precursor and complementary projects

Crop Tropical Legume (TL) Phases Country Varieties developed Seeds produced (tons) Area under new varieties (ha)
Chickpea TL II Phases I & II Ethiopia 8 158,471 1,320,592
Tanzania 4 1,412 11,767
Kenya 9 1,461 12,174
India 3 211,411 1,761,762
Bangladesh 1 137 1,145
TL III Ethiopia 3 8,951 74,589
India 0 725 6,042
Total 28 382,569 3,188,071
Cowpea TL II Phases I & II Burkina Faso 6 0 0
Ghana 4 0 0
Mali 2 751 18,775
Nigeria 7 3,712 92,788
Senegal 0 0 0
Niger 5 6,146 153,640
Mozambique 0 774 19,338
Tanzania 0 2 58
TL III Burkina Faso 0 1,353 33,829
Ghana 0 2,342 58,548
Mali 5 1,484 37,102
Nigeria 0 3,790 94,750
Total 29 20,353 508,825
Common bean TL II Phases I & II Ethiopia 15 27,702 277,021
Kenya 17 5,657 56,568
Malawi 13 3,216 32,156
Tanzania 12 2,268 22,683
Uganda 18 15,183 151,834
Zimbabwe 7 1,373 13,729
Nigeria 0 0 0
TLIII Ethiopia 13 13,575 135,745
Tanzania 9 3,821 38,214
Uganda 0 23,735 237,353
Total 104 96,530 965,302
Groundnut TL II Phases I & II Burkina Faso 0 613 6,130
Ghana 0 417 4,169
India 16 20,092 200,916
Bangladesh 0 166 1,660
Mali 9 1,380 13,798
Nigeria 3 2,562 25,619
Senegal 6 3 33
Niger 5 1,420 14,196
Tanzania 9 25,455 254,550
Uganda 12 578 5,777
Malawi 7 18,431 184,311
Mozambique 6 133 1,327
TL III Burkina Faso 0 7,944 79,440
Ghana 0 205 2,051
Mali 0 2,929 29,294
Nigeria 0 7,843 78,425
Tanzania 3 7,416 74,155
Uganda 0 4,049 40,488
Total 76 101,634 1,016,339
Pigeonpea TL II Phases I & II Ethiopia 0   0
India 7 2,371 94,854
Bangladesh 0 0 0
Kenya 3   0
Tanzania 0 1,488 59,536
Uganda 0 39 1,572
Zimbabwe 0   0
Mozambique 4   0
Malawi 3 1,787 71,488
Zambia 2 0 0
Total 19 5,686 227,450
Soybean TL II Phases I & II Ethiopia 0   0
Kenya 7 341 4,541
Tanzania 2   0
Uganda 0   0
Zimbabwe 0   0
Mozambique 0 4,823 64,305
Malawi 0 122 1,627
Nigeria 1 8,860 118,134
Total 10 14,146 188,607
Total   266 620,917 6,093,267

3. COMMON BEAN – MARKET‐DRIVEN BREEDING AND GENDER‐RESPONSIVE PARTICIPATORY VARIETAL SELECTION

Guided by market‐driven approaches to develop client preferred common bean varieties, significant efforts were made to address the production constraints and develop multi‐trait common bean varieties. In parallel, the genome sequence of common bean became available from a US‐led consortium (Schmutz et al., 2010). Molecular markers for several traits were developed (Mukankusi‐Mugisha et al., 2019) and used for selection in breeding programmes to develop varieties resistant to key diseases and insect pests. In brief, 104 common bean varieties were developed and released and 96,530 tons of certified seed were produced and planted on about 965,302 ha (Table 1). Some of these achievements have been presented by Mukankusi‐Mugisha et al. (2019). The authors have also highlighted the efforts to utilize modern genomic tools to increase scale, efficiency, accuracy and speed of breeding. In addition, adoption of gender‐responsive participatory variety selection that led to the release of several market preferred varieties in 31 African countries has been highlighted.

4. COWPEA – A BETTER UNDERSTANDING OF GENETICS, GENOMICS AND DEPLOYMENT OF MODERN BREEDING APPROACHES

Cowpea is an important source of protein for millions of smallholder farmers, mainly in West and Central Africa. However, abiotic and biotic stresses adversely affect its productivity and production. Efforts under TL projects led to a better understanding of genetics, genomics and breeding of cowpea and various abiotic and biotic factors affecting its yield. TL, together with other sister projects, contributed to the development of cowpea genomic resources such as consensus genetic map (Lucas et al., 2011), genome sequence (Lonardi et al., 2019), etc. The cowpea team in TL projects aimed at developing drought tolerant, phosphorus use efficient, bacterial blight and virus resistant lines by exploiting available genetic resources and deploying modern breeding tools. Through the support of the TL projects, 29 cowpea varieties were developed and 20,353 tons of certified seeds were produced and planted on about 508,825 ha (Table 1). These efforts have been highlighted by Boukar et al. (2019) in this special issue.

5. GROUNDNUT – ADVANCES IN GENOMICS AND IMPLEMENTATION OF INTEGRATED BREEDING APPROACHES

Low groundnut yields in Asia and Africa can be attributed to various production constraints, leading to less production and low income for smallholder farmers. Advances made under TL and associated projects led to a better understanding of the groundnut genome, discovery of genes/variants for traits of interest and the integration of marker‐assisted breeding for selected traits. Under TL projects, a total of 76 groundnut varieties were developed and released and 101,634 tons of certified seed were produced and planted on about 1 million ha by 2017 (Table 1). The integration of genomic tools in the breeding process accompanied by increased precision of yield trialling and phenotyping is expected to increase efficiency and enhance genetic gain for the released improved groundnut varieties. There are already several success stories of development of improved lines for resistance to foliar diseases (Pasupuleti et al., 2016; Varshney, Pandey, et al., 2014) and for high oleic acid content (Bera et al., 2018; Janila et al., 2016). In the review paper by Desmae et al. (2019), the authors highlight the advances in genetics, genomics and breeding to improve the productivity of groundnut. Recent availability of genome sequences of tetraploid groundnut (Bertioli et al., 2019; Chen et al., 2019; Zhuang et al., 2019) will help in further accelerating molecular breeding in groundnut.

6. PIGEONPEA ‐ AN AMALGAM OF BREEDING AND GENOMIC RESEARCH

Pigeonpea was part of the legume crops portfolio in two phases of the project (TL II Phases I and II), during which 19 improved pigeonpea varieties and hybrids were developed and released and 5,686 tons of certified seed were produced and planted on about 227,450 ha (Table 1). With partial support from this project and others, significant advances were made in genomics research. Availability of the draft genome sequence (Varshney et al., 2012) with large‐scale marker resources (Chanda Venkata et al., 2018) oriented research towards trait mapping for flowering time, determinacy, fertility restoration, yield attributing traits and photo insensitivity. Molecular markers have been developed for assessing the purity of hybrids (Bohra et al., 2011; Saxena, Saxena, & Varshney, 2010). Modern genomic tools such as next‐generation sequencing and genome‐wide selection are leading towards next generation breeding and enhancing selection efficiency. The paper by Chanda Venkata et al. (2018) emphasizes the ongoing genetic improvement in pigeonpea that integrates conventional breeding with genomic research.

7. SOYBEAN ‐ PUBLIC SECTOR BREEDING FOR CULTIVAR DEVELOPMENT IN THE AFRICAN TROPICS

Cultivated soybean is the number one oil and protein supplier for animal and human nutrition. It accounts for about 84.5% of the world's grain legumes trade (Abate et al., 2011). Although SSA accounts for less than 2% of the global production, it constitutes an important component in smallholder cropping systems. In SSA, soybean has made comparable contribution to the growth in production with annual growth rates of 3.0% in area and 3.5% in yield. Despite these positive trends, average soybean yields in Africa (1.2 tons/ha) are much lower than the global average of about 2.5 tons/ha. The low yields are due to a number of production constraints including low adoption of improved varieties and poor agronomic practices. Two phases of TL projects, together with other associated projects, facilitated the development and release of 10 improved varieties and the production of 14,146 tons of certified seeds that replaced old varieties on about 188,607 ha (Table 1). Chigeza et al. (2019) provide an overview of current soybean breeding in SSA and an update on the accomplishments of the IITA soybean breeding programme.

8. FABA BEAN ‐ BREEDING FOR BIOTIC AND ABIOTIC STRESSES

Although faba bean (Vicia faba) was not part of the TL projects, we included an article on advances in genetics and breeding of faba bean by Maalouf et al. (2018) as this is an important grain legume crop in Africa, especially because of its high yield potential and nutrition‐dense grains. This article presents efforts and achievements made in faba bean improvement in the last four decades, which led to the doubling of global average yields. The authors have reviewed the genetic diversity, breeding methodologies, major achievements in biotic and abiotic traits and recent molecular approaches. Maalouf et al. (2018) anticipate the development of more coherent genetic maps to facilitate the assembling and ordering of genomic scaffolds in future efforts of genome sequencing, trait discovery and molecular breeding approaches.

9. MARKET‐LED OPTIONS TO SCALE UP LEGUME SEEDS IN DEVELOPING COUNTRIES

Smallholder farmers need not only improved varieties, but also connection to markets so that they can generate more income. Therefore, TL projects invested in this direction as well. It fostered innovative public‐private partnerships in joint testing of innovative market‐led seed systems, skills and knowledge enhancement and de‐risking private sector initiatives by introducing new approaches that were previously overlooked in technology delivery. As new public and private seed companies, individual seed entrepreneurs and farmer organizations emerged, the capacities of existing ones were enhanced. This resulted in significant rise in production, availability and accessibility of various seed classes and grades of newly improved and farmer preferred legume varieties in the target countries. These experiences have been documented by Rubyogo et al. (2019) in this issue.

10. INTEGRATION OF GENOMICS, GENETICS, BREEDING AND SEED SYSTEMS TO ACCELERATE GENETIC GAINS

The article by Ojiewo et al. (2019) highlights the importance of continuous genetic improvement for enhanced productivity, production, quality and adoption of higher yielding cultivars to enhance their sustainable and timely availability, accessibility and affordability. It discusses exploring of plant genetic resources and their genetic characterization, trait discovery based on genome sequences and large‐scale marker resources available and pre‐breeding approaches. The authors also highlight the value of diagnostic markers for early generation selection and molecular breeding by providing the current status of their availability and usage. A detailed account is given of the deployment of molecular breeding for developing superior lines. Finally, the authors provide a road map to develop better varieties rapidly by integrating different genomic, genetic and breeding approaches. Adoption of decision support tools may help achieve greater scale (Varshney et al., 2016). In addition, improved cultivars of the legume crops are also more responsive to improved crop management for high productivity, making them increasingly more relevant to reducing hunger in the areas they are traditionally grown and consumed.

11. IMPACT ON THE GROUND

During Phases I and II of the project, disseminated improved varieties were adopted on at least 4.0 million hectares and more than US$ 2.6 billion was generated from the project and investment partners. This is far above the total TL II (Phase I and Phase II) investment grossly compounded at US$ 48 million. Leveraging direct and partner investments, the project generated US$ 54 for each dollar invested during TL II. Furthermore, TL III supported the production of 90,161 tons of certified/QDS seed in its first 3 years (2015–2017). This seed was planted on about 1 million ha to produce 1.2 million tons of grain valued at almost US$ 616 million. This implies that for every US$ 1 invested in TL projects, there is a gross return of about US$ 25 (Monyo & Varshney, 2016). The TL III project alone has reached about 5 million smallholder legume farmers with high quality seed of improved varieties at an average landholding of 0.2 ha/household under promoted legumes. Overall, the BMGF investment in TL II and TL III projects has supported the production of about 498,000 tons of certified seeds for the target legume crops over the past decade (2007–2017) in SSA and South Asia. This certified seed has been planted on about 5.0 million ha by more than 25 million smallholder farmers in 15 countries and produced about 6.1 million tons of grain worth US$ 3.2 billion (Table 1).

Impact for change studies were conducted in all Tier 1 countries and crops – Nigeria (groundnut and cowpea), Tanzania (common bean and groundnut), and Ethiopia (common bean and chickpea). An interesting example of common bean adoption in southern Tanzania involves variety 'Uyole 96' that had been dominating more than 60% of production by area. By 2016, 'Uyole 96' had been replaced by TL project‐promoted 'Njano Uyole' variety that is appreciated for its agronomy, consumption, processing and marketing attributes such as better yield, pest/disease resistance, ease of shelling, storability, market price, colour and ease of cooking.

The technological progress in the form of varietal change and improved agronomic practices have combined to provide positive growth trends in common bean productivity in Ethiopia. For example, yield grew from 1.0 ton/ha in 2008 to about 1.7 ton/ha in 2016. After accounting for cofounding factors, the adoption of improved common bean varieties increased the average yield of beans by 0.336 tons/ha. The national adoption rate of improved varieties in Ethiopia is about 37% of bean growers, which translates to about 1.5 million households. 'Mexican 142' variety that was controlling over 50% of the white canning bean market class and 'Red Wolita' variety that was controlling about 70% of the red cooking bean type at the time of baseline studies in 2009 have been totally replaced by new varieties promoted under the project.

Improved groundnut varieties in Nigeria registered an overall adoption rate of 44% (60% for females and 42% for males) by sampled farmers. When the project started in 2007, old varieties released between the 1960s and early 1990s, such as 'Samnut 1' to 'Samnut 20', were still dominant. The TL projects promoted the adoption of 'Samnut 21', Samnut 22' and 'Samnut 23' released in 2000 before the release of newer varieties 'Samnut 24' (2011), 'Samnut 25' (2013) and 'Samnut 26' (2013) which have replaced these old varieties. 'Samnut 24' currently controls about 25% of groundnut production. The project's interventions and enabling factors, including strategic partnerships, led to a significant yield increase of 0.222 tons/ha (0.391 tons/ha for females and 0.200 tons/ha for males) and associated income increase of US$ 135/ha (US$ 168/ha for females and US$ 93/ha for males).

In Nigeria, old varieties of cowpea such as 'Sampea 7', released in 1985, have almost been completely replaced by newer varieties such as 'Sampea 8' released in 2005 and promoted under the project since 2007. Better still, 'Sampea 8' was quickly replaced by 'Sampea 11' released in 2009, which in turn is currently seeing a swift replacement by 'Sampea 14' and 'Sampea 15' (released in 2011), 'Sampea 16' and 'Sampea 17' (released in 2015) and Sampea 18 and Sampea 19 (released in 2018).

The latest data on chickpea varietal adoption at the national level in Ethiopia are awaiting analysis. However, an earlier study conducted in three intervention districts showed up to 80% adoption levels of new varieties although the national average is estimated to be less than 30% (Verkaart, Munyua, Mausch, & Michler, 2017). Together with integrated crop management practices, chickpea productivity increased from 1.27 tons/ha in 2007 to 1.97 tons/ha in 2016; and total national production rose from 253,871 tons on about 200,066 ha in 2007 to 444,146 tons on about 225,608 ha in 2016. The change in production is about 75% over 2007 base figures, mainly accounted for by gain in productivity (55%) rather than area (13%).

On the other hand, in Tanzania, adoption of improved groundnut varieties is estimated at 19% nationally before correction through DNA fingerprinting data. However, the seed system works through about 400 farmer research groups linked to seed companies as contract seed producers, together with training and the adoption of integrated crop management practices have contributed to increased groundnut productivity from 0.724 tons/ha in 2008 to about 1.010 tons/ha in 2015 and total production from 340,770 tons on about 470,670 ha to 1,635,335 tons on about 1,619,500 ha in 2015. The change in production is about 480% over 2008 base figures and both gains in area (244%) and productivity (39%) have contributed to these remarkable increases. The varieties that were reigning before 2007 include 'Nyota' (1.5 tons/ha), 'Johari' (1.0 tons/ha), 'Sawia' (1.5 tons/ha) and 'Pendo' (1.5 tons/ha). While 'Pendo' is still dominant and is currently being replaced by rosette‐resistant 'Nachingwea' (1.0–1.5 tons/ha) and 'Mangaka' (1.5–1.8 tons/ha), the other varieties have largely been replaced.

In Mali, the ruling groundnut varieties before 2007 were very old, some dating back to 1928. New varieties less than 10 years old were promoted by the project. 'Fleur 11' and 'ICGV 86124' are currently replacing the old varieties because of their high fodder yield and short duration in an area with rainfall shortage where most farmers prefer early‐maturing varieties with high pod and haulm yields for livestock.

Finally, for sustainable legume production, it is not enough to generate new high yielding market preferred varieties and seed production; instead, it is equally important to have a well trained next generation of breeders. With this objective, TL projects have trained 34 Masters degree and 18 PhD degree students including 10 females and 42 males (Table 2).

Table 2.

Number of students trained under TL projects

Country Degree Crop Name Sex Male Female Total
Burkina Faso PhD Cowpea Gnankambary/Trore Karidiatou F 1 1 2
PhD Cowpea Lalsaga Joel M      
Ethiopia MSc Chickpea Mitiku Demissie M 3   3
MSc Chickpea Mekbib Gebretsadik M      
MSc Chickpea Tadesse Sefera M      
PhD Common bean Teshale Assefa M 3   3
PhD Common bean Berhanu Amsalu M      
PhD Common bean Kidane Tumsa Hurisa M      
Ghana MSc Groundnut Wohor Zakaria Osman M 1 1 2
MSc Cowpea Grace Adusei F      
PhD Cowpea Haruna Mohammed M 1   1
India MSc Pigeonpea Viskas Navhale M 1   1
PhD Chickpea Tosh Garg M 3   3
PhD Pigeonpea Rachit K. Saxena M      
PhD Pigeonpea S. L. Swargaonkar M      
Kenya MSc Chickpea Peter Kaloki M 2 2 4
MSc Common bean Waweru Felix Muchiri M      
MSc Chickpea Nancy W. Njogu F      
MSc Seed systems Scolastica Wambwa F      
PhD Agro‐enterprise David Nyongesa M 1   1
Malawi MSc Groundnut Wilson Chafutsa M 1   1
PhD Common bean Lizzie Kachulu F   1 1
Mali MSc Cowpea Siaka Dembele M 4   4
MSc Ag economics Abdoulaye Diarra M      
MSc Groundnut Mamary Traore M      
MSc Cowpea Diarra Youssouf M      
PhD Cowpea Ibrahima Z. Doumbia M 1   1
Mozambique MSc Cowpea Guilhermino Boina M 3 1 4
MSc Cowpea Henrique Victor Colial M      
MSc Cowpea John Bulassi Kaunda M      
MSc Soybean Anica S.F. Massas F      
Niger MSc Groundnut Nana M.1. Garba F 1 1 2
MSc Cowpea Abdou Souleymane M      
Nigeria MSc Cowpea Habibu Aliyu M 7   7
MSc Soybean Shaahu Aondover M      
MSc Cowpea Auwal Adamu Umar M      
MSc Cowpea AK Olomide Oluwatosin M      
MSc Cowpea Oluwaseyi Toyinbo        
MSc Cowpea Jonathan Joseph Iduh Otene M      
MSc Groundnut Shiyanbola Abiodun Abdulsalam M      
PhD Cowpea Kayode Ogunsola M 2 1 3
PhD Cowpea Oladejo Samuel Atanda M      
PhD Groundnut Kalat Patience Duniya F      
Tanzania MSc Groundnut Mohamed Ismael M 6   6
MSc Cowpea Didasi R. Kimaro M      
MSc Groundnut Juma Mfaume M      
MSc Cowpea Julius Missanga M      
MSc Soybean Justine Alfred Mushi M      
MSc Common bean Julius Peter Mbiu M      
PhD Pigeonpea Maryama Mayomba F   2 2
PhD Groundnut Happy Makuru Daudi F      
Zimbabwe PhD Common bean Godwill Makunde M 1   1
Total         42 10 52

12. SUMMARY AND OUTLOOK

TL projects helped the CGIAR and their NARS partners develop and release 266 improved varieties of targeted legume crops, produce about 498,000 tons of certified seeds of the legume crops in the target geographies and train 52 new scientists. TL and other related projects also helped to develop genomic information, diagnostic markers and deploy them in breeding programmes. Some of these results have been compiled by Ojiewo et al. (2019) in the special issue. Legume breeding in SSA and SA (India) has come of age through the investment of TL and other related projects. The time has come to turn to sequence‐based breeding in these legume crops. Furthermore, while the integration of genomic information and deployment of modern breeding approaches such as sequence‐assisted breeding (Varshney, Pandey, et al., 2019) and speed breeding (Watson et al., 2018) can accelerate the development of superior varieties, it is crucial to have a strong seed delivery system in SSA and SA so that farmers can have access to improved varieties (Varshney et al., 2018). The pace at which old varieties are replaced by new ones needs to be accelerated. Adopting appropriate agronomic practices while cultivating improved varieties will help in realizing the full potential of genetics and breeding and in delivering more produce to farmers. At the same time, providing farmers access to markets will fetch them more income to improve their livelihoods. Subsequently, market feedback should go back in the loop to define traits in the development of market‐led and climate resilient varieties. The future of legumes breeding is bright and promises to benefit smallholder farmers in SSA and SA.

CONFLICT OF INTEREST

The authors declare that they have no conflicts of interest.

AUTHORS’ CONTRIBUTION

RKV as Principal Investigator and CO as the Coordinator for the Tropical Legumes III and EM as the former Coordinator for the Tropical Legumes III and II, have compiled achievements of Tropical Legumes presented in this article. RKV wrote the first draft of the article and finalized with contributions of CO and EM.

ACKNOWLEDGEMENTS

The authors of this article/editor of this special issue are thankful to all the scientists, research staff and leadership team of NARS partners and the three CGIAR centres, namely ICRISAT, CIAT and IITA for their contribution to successfully implementing the three phases of the project. We are also thankful to Dr CLL Gowda, Principal Investigator and Dr Tsedeke Abate, Project Coordinator of Phase I and part of Phase II of Tropical Legumes project for all their contributions. Sincere thanks are due to Dr David Bergvinson (2007–2013) and Dr Jeff Ehlers (2013–2019), Program Managers from BMGF for their guidance, support and mentoring and the BMGF for the financial support to the three phases of the project. Thanks are also due to other funding agencies and organizations for leveraging support to TL projects as its activities were initially undertaken as a part of CGIAR Research Program on Grain Legumes and subsequently of the CGIAR Research Program on Grain Legumes and Dryland Cereals (CRP‐GLDC). ICRISAT is a member of the CGIAR System Organization.

Varshney RK, Ojiewo C, Monyo E. A decade of Tropical Legumes projects: Development and adoption of improved varieties, creation of market‐demand to benefit smallholder farmers and empowerment of national programmes in sub‐Saharan Africa and South Asia. Plant Breed. 2019;138:379–388. 10.1111/pbr.12744

Communicated by: Frank Ordon

The copyright line for this article was changed on 17 August 2019 after original online publication.

REFERENCES

  1. Abate, T. , Shiferaw, B. , Gebeyehu, S. , Amsalu, B. , Negash, K. , Assefa, K. , Hagmann, J. (2011). A systems and partnership approach to agricultural research for development. Outlook on Agriculture, 40(3), 213–220. 10.5367/oa.2011.0048. [DOI] [Google Scholar]
  2. Bera, S. K. , Kamdar, J. H. , Kasundra, S. V. , Dash, P. , Maurya, A. K. , Jasani, M. D. , … Varshney, R. K. (2018). Improving oil quality by altering levels of fatty acids through marker‐assisted selection of ahfad2 alleles in peanut (Arachis hypogaea L.). Euphytica, 214, 162 10.1007/s10681-018-2241-0 [DOI] [Google Scholar]
  3. Bertioli, D. J. , Jenkins, J. , Clevenger, J. , Dudchenko, O. , Gao, D. , Seijo, G. , … Schmutz, J. (2019). The genome sequence of segmental allotetraploid peanut Arachis hypogaea . Nature Genetics, 51, 877–884. 10.1038/s41588-019-0405-z [DOI] [PubMed] [Google Scholar]
  4. Bohra, A. , Dubey, A. , Saxena, R. K. , Penmetsa, R. V. , Poornima, K. N. , Kumar, N. , … Varshney, R. K. (2011). Analysis of BAC‐end sequences (BESs) and development of BES‐SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11, 56 10.1186/1471-2229-11-56 [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Boukar, O. , Belko, N. , Chamarthi, S. , Togola, A. , Batieno, J. , Owusu, E. , … Fatokun, C. (2019). Cowpea (Vigna unguiculata): Genetics, genomics and breeding. Plant Breeding, 10.1111/pbr.12589 [DOI] [Google Scholar]
  6. Chanda Venkata, S. K. , Nadigatla Veera Prabha Rama, G. R. , Saxena, R. K. , Saxena, K. , Upadhyaya, H. D. , Siambi, M. , … Varshney, R. K. (2018). Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding, 10.1111/pbr.12656 [DOI] [Google Scholar]
  7. Chen, X. , Lu, Q. , Liu, H. , Zhang, J. , Hong, Y. , Lan, H. , … Liang, X. (2019). Sequencing of cultivated peanut, Arachis hypogaea, yields insights into genome evolution and oil improvement. Molecular Plant, 12(7), 920–934. 10.1016/j.molp.2019.03.005 [DOI] [PubMed] [Google Scholar]
  8. Chigeza, G. , Boahen, S. , Gedil, M. , Agoyi, E. , Mushoriwa, H. , Denwar, N. , … Chikoye, D. (2019). Public sector soybean (Glycine max) breeding: Advances in cultivar development in the African tropics. Plant Breeding, 10.1111/pbr.12682 [DOI] [Google Scholar]
  9. Desmae, H. , Janila, P. , Okori, P. , Pandey, M. K. , Motagi, B. N. , Monyo, E. , … Varshney, R. K. (2019). Genetics, genomics and breeding of groundnut (Arachis hypogaea L.). Plant Breeding, 10.1111/pbr.12645 [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Gaur, P. M. , Samineni, S. , Thudi, M. , Tripathi, S. , Sajja, S. B. , Jayalakshmi, V. , … Dixit, G. P. (2019). Integrated breeding approaches for improving drought and heat adaptation in chickpea (Cicer arietinum L.). Plant Breeding, 10.1111/pbr.12641 [DOI] [Google Scholar]
  11. Janila, P. , Pandey, M. K. , Shasidhar, Y. , Variath, M. T. , Sriswathi, M. , Khera, P. , … Varshney, R. K. (2016). Molecular breeding for introgression of fatty acid desaturase mutant alleles (ahFAD2A and ahFAD2B) enhances oil quality in high and low oil containing peanut genotypes. Plant Science, 242, 203–213. 10.1016/j.plantsci.2015.08.013 [DOI] [PubMed] [Google Scholar]
  12. Lonardi, S. , Muñoz‐Amatriaín, M. , Liang, Q. , Shu, S. , Wanamaker, S. I. , Lo, S. , … Close, T. J. (2019). The genome of cowpea (Vigna unguiculata [L.] Walp.). The Plant Journal, 98, 767–782. 10.1111/tpj.14349 [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Lucas, M. R. , Diop, N. N. , Wanamaker, S. , Ehlers, J. D. , Roberts, P. A. , & Close, T. J. (2011). Cowpea‐soybean synteny clarified through an improved genetic map. Plant Genome, 4, 218–224. 10.3835/plantgenome2011.06.0019 [DOI] [Google Scholar]
  14. Maalouf, F. , Hu, J. , O’Sullivan, D. M. , Zong, X. , Hamwieh, A. , Kumar, S. , & Baum, M. (2018). Breeding and genomics status in faba bean (Vicia faba). Plant Breeding, 10.1111/pbr.12644 [DOI] [Google Scholar]
  15. Mannur, D. M. , Babbar, A. , Thudi, M. , Sabbavarapu, M. M. , Roorkiwal, M. , Yeri, S. B. , … Varshney, R. K. (2019). Super Annigeri 1 and improved JG 74: Two Fusarium wilt‐resistant introgression lines developed using marker‐assisted backcrossing approach in chickpea (Cicer arietinum L.). Molecular Breeding, 39, 2 10.1007/s11032-018-0908-9 [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Monyo, E. S. , & Varshney, R. K. (2016). Seven seasons of learning and engaging smallholder farmers in the drought‐prone areas of sub‐Saharan Africa and South Asia through Tropical Legumes, 2007–2014. (236 pp.). Patancheru 502 324, Telangana, India: International Crops Research Institute for the Semi‐Arid Tropics. ISBN 978‐92‐9066‐5687. http://oar.icrisat.org/9635/. [Google Scholar]
  17. Mukankusi, C. , Raatz, B. , Nkalubo, S. , Berhanu, F. , Binagwa, P. , Kilango, M. , … Beebe, S. (2019). Genomics, genetics and breeding of common bean in Africa: A review of tropical legume project. Plant Breeding, 10.1111/pbr.12573 [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Ojiewo, C. , Monyo, E. , Desmae, H. , Boukar, O. , Mukankusi‐Mugisha, C. , Thudi, M. , … Varshney, R. K. (2019). Genomics, genetics and breeding of tropical legumes for better livelihoods of smallholder farmers. Plant Breeding, 10.1111/pbr.12554 [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Pasupuleti, J. , Pandey, M. K. , Manohar, S. S. , Variath, M. T. , Nallathambi, P. , Nadaf, H. L. , … Varshney, R. K. (2016). Foliar fungal disease‐resistant introgression lines of groundnut (Arachis hypogaea L.) record higher pod and haulm yield in multilocation testing. Plant Breeding, 135, 355–366. 10.1111/pbr.12358 [DOI] [Google Scholar]
  20. Pratap, A. , Chaturvedi, S. K. , Tomar, R. , Rajan, N. , Malviya, N. , Thudi, M. , … Singh, N. P. (2017). Marker‐assisted introgression of resistance to fusarium wilt race 2 in Pusa 256, an elite cultivar of desi chickpea. Molecular Genetics and Genomics, 292, 1237–1245. 10.1007/s00438-017-1343-z [DOI] [PubMed] [Google Scholar]
  21. Rubyogo, J.‐C. , Akpo, E. , Omoigui, L. , Gaur, P. , Chaturvedi, S. K. , Fikre, A. , … Kalamera, S. (2019). Market‐led options to scale up legume seeds in developing countries: Experiences from the Tropical Legumes Project. Plant Breeding, 10.18356/a6d49147-en [DOI] [Google Scholar]
  22. Saxena, R. K. , Saxena, K. , & Varshney, R. K. (2010). Application of SSR markers for molecular characterization of hybrid parents and purity assessment of ICPH 2438 hybrid of pigeonpea [Cajanus cajan (L.) Millspaugh]. Molecular Breeding, 26, 371–380. 10.1007/s11032-010-9459-4 [DOI] [Google Scholar]
  23. Schmutz, J. , Cannon, S. B. , Schlueter, J. , Ma, J. , Mitros, T. , Nelson, W. , … Jackson, S. A. (2010). Genome sequence of the palaeopolyploid soybean. Nature, 463, 178–183. 10.1038/nature08670 [DOI] [PubMed] [Google Scholar]
  24. Thudi, M. , Gaur, P. M. , Krishnamurthy, L. , Mir, R. R. , Kudapa, H. , Fikre, A. , … Varshney, R. K. (2014). Genomics‐assisted breeding for drought tolerance in chickpea. Functional Plant Biology, 41, 1178–1190. 10.1071/FP13318 [DOI] [PubMed] [Google Scholar]
  25. Varshney, R. K. , Chen, W. , Li, Y. , Bharti, A. K. , Saxena, R. K. , Schlueter, J. A. , … Jackson, S. A. (2012). Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource‐poor farmers. Nature Biotechnology, 30, 83–89. 10.1038/nbt.2022 [DOI] [PubMed] [Google Scholar]
  26. Varshney, R. K. , Gaur, P. , Chamarthi, S. K. , Krishnamurthy, L. , Tripathi, S. , Kashiwagi, J. , … Jaganathan, D. (2013). Fast‐track introgression of “QTL‐hotspot” for root traits and other drought tolerance traits in JG 11, an elite and leading variety of chickpea (Cicer arietinum L.). The Plant Genome, 6, 1–9. 10.3835/plantgenome2013.07.0022 [DOI] [Google Scholar]
  27. Varshney, R. K. , Mohan, S. M. , Gaur, P. M. , Chamarthi, S. K. , Singh, V. K. , Srinivasan, S. , … Kaur, L. (2014). Marker‐assisted backcrossing to introgress resistance to Fusarium wilt race 1 and Ascochyta blight in C 214, an elite cultivar of chickpea. The Plant Genome, 7, 1–11. 10.3835/plantgenome2013.10.0035 [DOI] [Google Scholar]
  28. Varshney, R. K. , Pandey, M. K. , Bohra, A. , Singh, V. K. , Thudi, M. , & Saxena, R. K. (2019). Toward the sequence‐based breeding in legumes in the post‐genome sequencing era. Theoretical and Applied Genetics, 132, 797–816. 10.1007/s00122-018-3252-x [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Varshney, R. K. , Pandey, M. K. , Janila, P. , Nigam, S. N. , Sudini, H. , Gowda, M. V. C. , … Nagesh, P. (2014). Marker‐assisted introgression of a QTL region to improve rust resistance in three elite and popular varieties of peanut (Arachis hypogaea L.). Theoretical and Applied Genetics, 127, 1771–1781. 10.1007/s00122-014-2338-3 [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Varshney, R. K. , Singh, V. K. , Hickey, J. M. , Xun, X. U. , Marshall, D. F. , Wang, J. , … Ribaut, J.‐M. (2016). Analytical and decision support tools for genomics‐assisted breeding. Trends in Plant Science, 21, 354–363. 10.1016/j.tplants.2015.10.018 [DOI] [PubMed] [Google Scholar]
  31. Varshney, R. K. , Song, C. , Saxena, R. K. , Azam, S. , Yu, S. , Sharpe, A. G. , … Cook, D. R. (2013). Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31, 240–248. 10.1038/nbt.2491 [DOI] [PubMed] [Google Scholar]
  32. Varshney, R. K. , Thudi, M. , Pandey, M. K. , Tardieu, F. , Ojiewo, C. , Vadez, V. , … Bergvinson, D. (2018). Accelerating genetic gains in legumes for the development of prosperous smallholder agriculture: Integrating genomics, phenotyping, systems modelling and agronomy. Journal of Experimental Botany, 69, 3293–3312. 10.1093/jxb/ery088 [DOI] [PubMed] [Google Scholar]
  33. Varshney, R. K. , Thudi, M. , Roorkiwal, M. , He, W. , Upadhyaya, H. D. , Yang, W. , … Liu, X. (2019). Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics, 51, 857–864. 10.1038/s41588-019-0401-3 [DOI] [PubMed] [Google Scholar]
  34. Verkaart, S. , Munyua, B. G. , Mausch, K. , & Michler, J. D. (2017). Welfare impacts of improved chickpea adoption: A pathway for rural development in Ethiopia? Food Policy, 66, 50–61. 10.1016/j.foodpol.2016.11.007 [DOI] [PMC free article] [PubMed] [Google Scholar]
  35. Watson, A. , Ghosh, S. , Williams, M. J. , Cuddy, W. S. , Simmonds, J. , Rey, M.‐D. , … Hickey, L. T. (2018). Speed breeding is a powerful tool to accelerate crop research and breeding. Nature Plants, 4, 23 10.1038/s41477-017-0083-8 [DOI] [PubMed] [Google Scholar]
  36. Zhuang, W. , Chen, H. , Yang, M. , Wang, J. , Pandey, M. K. , Zhang, C. , … Varshney, R. K. (2019). The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics, 51, 865–876. 10.1038/s41588-019-0402-2 [DOI] [PMC free article] [PubMed] [Google Scholar]

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