TABLE 2.
In vitro samples used in this study
| Sample | Growth medium | Growth phase | Strain | Source or reference |
|---|---|---|---|---|
| Samples used for all assays | ||||
| 1 | CDM + 20 mM glucose | Mid-logarithmic | LAC* | This study |
| 2 | CDM + 20 mM glucose | Mid-logarithmic | LAC* | This study |
| 3 | CDM + 20 mM glucose | Early stationary | LAC* | This study |
| 4 | CDM + 20 mM glucose | Early stationary | LAC* | This study |
| 5 | CDM + 20 mM glucose | Early stationary | LAC* | This study |
| 6 | CDM + no additional carbon | Mid-logarithmic | LAC* | This study |
| 7 | CDM + no additional carbon | Mid-logarithmic | LAC* | This study |
| 8 | CDM + no additional carbon | Early stationary | LAC* | This study |
| 9 | CDM + no additional carbon | Early stationary | LAC* | This study |
| 10 | BHI | Mid-logarithmic | LAC* | This study |
| 11 | BHI | Mid-logarithmic | LAC* | This study |
| 12 | BHI | Mid-logarithmic | LAC* | This study |
| 13 | BHI | Mid-logarithmic | LAC* | This study |
| 14 | LB | Mid-logarithmic | SAU060112 | 30 |
| 15 | LB | Mid-logarithmic | SAU060112 | 30 |
| 16 | LB | Mid-logarithmic | SAU060112 | 30 |
| 17 | TSB | Early stationary | JE2 | 32 |
| 18 | TSB | Early stationary | JE2 | 32 |
| 19 | TSB | Early stationary | JE2 | 32 |
| 20 | TSB | Early stationary | UAMS-1790 | 31 |
| 21 | TSB | Mid-logarithmic | SH1000 | 31 |
| 22 | TSB | Mid-logarithmic | UAMS-1 | 31 |
| Samples used for only machine learning and model improvement analyses | ||||
| 23 | SCFM2 | Mid-logarithmic | LAC* | This study |
| 24 | SCFM2 | Mid-logarithmic | LAC* | This study |
| 25 | SCFM2 | Mid-logarithmic | LAC* | This study |
| 26 | SCFM2 | Mid-logarithmic | LAC* | This study |
| 27 | SCFM2 | Late logarithmic | LAC* | This study |
| 28 | SCFM2 | Late logarithmic | LAC* | This study |
| 29 | SCFM2 | Late logarithmic | LAC* | This study |
| 30 | SCFM2 | Late logarithmic | LAC* | This study |
| 31 | SCFM2 | Late logarithmic | LAC* | This study |
| 32 | SCFM2 + HNP-1 | Mid-logarithmic | LAC* | This study |
| 33 | SCFM2 + HNP-1 | Mid-logarithmic | LAC* | This study |