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. Author manuscript; available in PMC: 2019 Dec 10.
Published in final edited form as: J Chem Phys. 1999 Jun 21;111(1):89–99. doi: 10.1063/1.479256
Definition and properties of the emission anisotropy in the absence of cylindrical symmetry of the emission field: Application to the light quenching experiments
1Center for Fluorescence Spectroscopy, Department of Biochemistry and Molecular Biology, University of Maryland at Baltimore, Baltimore, Maryland 21201
1Center for Fluorescence Spectroscopy, Department of Biochemistry and Molecular Biology, University of Maryland at Baltimore, Baltimore, Maryland 21201
1Center for Fluorescence Spectroscopy, Department of Biochemistry and Molecular Biology, University of Maryland at Baltimore, Baltimore, Maryland 21201
a)
Faculty of Applied Physics and Mathematics. Technical University of Gdańsk, ul. Narutowicza 11/12, 80-952 Gdańsk, Poland.
The publisher's version of this article is available at J Chem Phys
Abstract
We considered the properties of the fluorescence anisotropy when the cylindrical symmetry of the fluorescence emission field is absent due to the effects of polarized light quenching. By light quenching we mean stimulated emission by a second longer wavelength pulse following the excitation pulse. In these experiments one observes the excited state population which remains following stimulated emission. When cylindrical symmetry is not present the generally known definition of the emission anisotropy cannot be applied. A generalized theory of anisotropy was described previously by Jabloński. However, we found this formalism to be inadequate for the expected experimental results of light quenching. An extension of this concept, which we call an anisotropy vector, appears capable of describing the expected orientation under all conditions of light quenching. We found that the anisotropy vector can exist within a plane defined by two projections rH and rV. The projection rV is comparable to the classical steady state or time-dependent anisotropy with cylindrical symmetry. The projection rH has no direct analogue in classical anisotropy theory. The interesting behavior of the anisotropy vector is that all possible points (rH, rV) are placed inside a certain triangle, which we call a triangle of anisotropy. For symmetrical molecules, or for molecules which display isotropic depolarizing rotations, the anisotropy vector is expected to decay on the anisotropy triangle along straight lines towards the origin. The concept of the anisotropy vector should allow predictions of the effect of polarized light quenching on the anisotropy decays, and suggests experimental methods to study anisotropy decays in the presence of light quenching. Further work is needed to apply these concepts to anisotropic rotators.
I. INTRODUCTION
To evaluate the fluorescence anisotropy one measures the intensity of the emission through a polarizer. Usually vertically polarized excitation and right-angle observation are chosen (Fig. 1). Then two measurements of the fluorescence intensity, I‖ and I⊥, are carried out with the observation polarizer oriented either parallel (‖) or perpendicular (⊥) to the direction of the electric vector of the polarized excitation. The emission anisotropy is then calculated as1,2
(1)
The validity of this method of measurement of the emission anisotropy is limited to the cases when the emission field is cylindrically symmetrical, that is, where the value of I⊥ remains constant for the observation detector placed anywhere in the x – y plane (Fig. 1). The symmetry properties of the emission field are determined by the symmetry of the observed spatial dependence of the intensity of the luminescence passed through the linear polarizer. In this sense, due to the cos2 transmission law of the polarizer, the symmetry of the emission field does not always have to be the same as the symmetry of the spatial distribution of the emission transition dipoles. Cylindrical symmetry of the emission field is always observed when an isotropic solution of the fluorophore is excited by a linearly polarized light. Under these conditions one-photon excitation generates values of r belonging to the interval (−0.2, 0.4). Values of r lying outside this interval may be observed when the excitation is a twoor three-photon process.3 The anisotropy of the fluorescence emission excited by natural or circularly polarized light is also related to two intensity components, I‖ and I⊥. Here the resulting emission field is also cylindrically symmetrical, but the definition of r slightly differs from Eq. (1),
(2)
The origin of this difference is that for natural or circularly polarized excitation the symmetry axis is not parallel but perpendicular to the electric vector of the excitation light.
Light quenching is a technique which allows modification of the polarized intensity components by stimulated emission.4–6 In such measurements one observes the remaining fluorescence, not the emission stimulated along the light path of the quenching pulse. In one-pulse light quenching, both excitation and quenching is caused by the same light pulse and the resulting distribution of the emission dipoles is always cylindrically symmetrical. In a two-pulse light quenching experiment the quenching pulse has a different wavelength and is delayed in time. The quenching pulse typically has a longer wavelength to overlap with the emission spectrum of the fluorophore. The quenching pulse is polarized either parallel or perpendicular to the polarization direction of the excitation pulse. In the presence of perpendicular two-pulse light quenching the resulting emission field may not display a cylindrical symmetry.7,8 For such cases the general definition of r, proposed by Jabloński9 may be applied
(3)
where
(4)
In Eq. (3)Ix, Iy, and Iz are the intensities of the emission measured through the observation polarizer oriented parallel to the respective axes of the Cartesian system (Fig. 2). The orientation of the system is selected so that the difference between the strongest and weakest component intensities is maximum. Because the definition (3) does not account for positive or negative values of r, Jabloński suggests that it should be complemented by a convention about the sign. When the sample is excited by a linearly polarized light, two of the intensity components are equal to each other, and Eq. (3) can be written in the form
(5)
The sign convention used is that r is positive when I‖>I⊥, and r is negative when I‖<I⊥. This convention together with Eq. (5) leads to expression (1). Similar considerations allow us to obtain Eq. (2) starting from Eq. (3). The definitions (1)–(3) can be used in both steady-state and time-resolved anisotropy measurements. In time-resolved experiments the intensities Ix, Iy, and Iz or I‖ and I⊥ are understood as dependent on time. These expressions are appropriate when the emission field is symmetrical about the vertical or z-axis. More complex expressions are needed in the absence of cylindrical symmetry.
II. THE ANISOTROPY VECTOR
Assume that intensities Ix, Iy, and Iz are measured within the coordination system oriented so that the difference between the strongest and weakest component intensities is maximum. To understand the meaning of the anisotropy vector we turn our attention to the following identities:
(6)
(7)
(8)
Each of the intensity components can be understood as a sum of the intensity components mean value (I/3) and an additional positive or negative value which describes the anisotropy of the emission field. Let us introduce the following notations:
(9)
(10)
(11)
The quantities rx, ry, and rz describe the relative excess of a given emission component over the average value of the other two emission components, i.e., Ix over (Iy+Iz)/2, Iy over (Iz+Ix)/2, and Iz over (Ix+Iy)/2. These quantities can be understood as the projected magnitudes of a certain vector along the axes of the Cartesian system (rx, ry, rz). We will call this vector a vector of anisotropy r. One can show that the magnitude |r| of this vector fulfills the following equation:
(12)
That means that Eq. (3) in fact defines the magnitude of the anisotropy vector. One can also see that
(13)
Equation (13) means that only two projections of the anisotropy vector are independent. For instance, in the case when ry and rz are known one has
(14)
In particular, all three projections of the anisotropy vector are equal to zero if any two of them are equal to zero.
Equation (13) constitutes the equation of a plane in the coordinate system (rx, ry, rz) (Fig. 3). The angle α between this plane (plane of anisotropy) and each of the axes rx, ry, and rz is equal to . That means that all anisotropy vectors lie in one plane and that the magnitude and direction of each anisotropy vector can be described by just two numbers. We introduce a new coordinate system (rH, rV) with the axes rH and rV lying in this plane (Fig. 3) by the transformation
(15)
(16)
We use the subscript V (vertical) because usually the z-axis is directed vertically in the experiments, and subscript H (horizontal) because the intensities Ix and Iy are detected in the horizontal plane. By substituting Eqs. (9)–(11) for rx, ry, rz in Eqs. (15) and (16) one obtains
(17)
(18)
The projections rH and rV describe the anisotropy of the emission field of any symmetry. Equation (18) may be written in other two forms; rV=[Iz−(Ix+Iy)/2]/I or rV=[(Iz−Ix)+(Iz−Iy)]/(2I). This means that the quantity rV may be understood as describing either the excess of the intensity component Iz over the average value of the intensity components Ix and Iy or the relative mean value of the differences Iz−Ix and Iz−Iy. The quantity rH describes the relative difference between the intensity components Ix and Iy.
There exists an infinite number of other coordinate systems allowing expression the anisotropy vector as a combination of two components. However, the coordinate system defined by Eqs. (15) and (16) seems to be the most convenient to describe anisotropy of the emission field where the z-axis is a distinguished axis. All possible values of the anisotropy components rH and rV are limited by the following three specific points R=(rH, rV): , where Ix=I and Iy=Iz=0, , where Iy=I and Ix=Iz=0, and Rz≡(0,1), where Iz=I and Ix=Iy=0. These three points define an equilateral triangle as shown in Fig. 4. One can show that all other possible points (rH, rV) lie on this triangle. The anisotropy values corresponding to the emission fields which are cylindrically symmetrical along the respective axes of the coordinate system (x,y,z), that is describing the cases where Ix=Iy, or Iy=Iz or Iz=Ix, are placed on the medians of the triangle. In the particular case of z-axis cylindrical symmetry of the emission field rH=0 and the anisotropy is described by magnitude of the projection rV varying from −0.5 to +1.0. The relative intensities Ix /I, Iy /I, and Iz /I calculated from Eqs. (6)–(8) vary along the respective medians of the triangle from zero to unity (Fig. 5). Points on the Rx, Ry side of the triangle correspond to the class of the emission fields totally polarized in the x – y plane, for which Iz=0. Among others, this class involves emission originated from the distribution of the emission dipoles which is rod-like along the x-axis, disc-like in the x – y plane, or rodlike along the y-axis (Fig. 5). Points on the Rx, Rz and Ry, Rz side of the triangle have an analogous interpretation. The centroid of the triangle corresponds to Ix /I=Iy /I=Iz /I=1/3 and to the spherically symmetrical emission field. The vertices of the triangle correspond to the emission fields which are rodlike along the respective axes of the coordinate system (x,y,z). If the emission field is a result of excitation by the linearly polarized light and the z-axis is chosen to be parallel to the electric vector of the excitation light then Ix=Iy and Eqs. (17) and (18) simplify to
(19)
In this case the horizontal component rH of the anisotropy vanishes and the projection of the anisotropy vector along the rV-axis is tantamount to the anisotropy defined by Eq. (1)r=rV.
While Eqs. (1) and (3) refers to the same notation (r), the quantities they describe are qualitatively different. Equation (3) describes the magnitude of the anisotropy vector which is always positive and Eq. (1) describes the magnitude of projection of the vector along the rV-axis, which can be positive, zero, or negative. The comparison of Eqs. (17) and (18) with Eq. (12) implies that the magnitude |r| of the anisotropy vector is related to rH and rV by the equation
(20)
The anisotropy defined by Eq. (3) provides only a partial information about the observed symmetry of the emission field. Full information is provided by quantities rH and rV defined by Eqs. (17) and (18).
Another interesting interpretation of the anisotropy vector is possible using a Cartesian system with the coordinates representing the relative intensities Ix /I, Iy /I, and Iz /I. In such a system all possible points (Ix /I,Iy /I,Iz /I) lie in the plane Ix /I+Iy /I+Iz /I=1. Because none of these intensities can be negative the possible positions of the points (Ix /I,Iy /I,Iz /I) are limited to the triangle with vertices placed in the points (1,0,0), (0,1,0), and (0,0,1) (Fig. 6). One can show that this triangle is tantamount to our triangle of anisotropy. The classical definition of anisotropy (1) can be also discussed in this interpretation by introducing a two-dimensional system (I‖ /I,I⊥ /I) (Fig. 6).
To characterize systems for which the emission anisotropy evolves with time one can use the components rH(t) and rV(t) of the time-dependent anisotropy vector r(t), defined by the time-dependent forms of Eqs. (17) and (18),
(21)
(22)
Using rH and rV, Eqs. (6)–(8) may be rewritten in the form
(23)
(24)
(25)
The time evolution of the intensity components Ix, Iy, and Iz is described by the time-dependent versions of Eqs. (23)–(25),
(26)
(27)
(28)
Equations (26)–(28) are important for describing the time-dependent polarized intensities in light quenching experiments where the polarization of the quenching pulse is different than that of the excitation pulse. When the quenching light has the same polarization as the excitation light rH(t)=0, rV(t)=r(t), and one obtains from Eqs. (26)–(28) the well-known equations describing the time evolution of the intensity components of the cylindrically symmetrical emission field
(29)
(30)
If the polarization of the light quenching pulse is not along the same direction as the excitation, then the polarized component decay according to Eqs. (26)–(28). Summarizing this section, one can say that the emission anisotropy can be understood as a vector. The general expression for anisotropy predicted by Jabloński allows calculation of only the magnitude of this vector, but not the values of its components. If the z-axis of the emission field is distinguished then rH [Eq. (17)] and rV [Eq. (18)] is a convenient representation of the anisotropy vector. These two quantities completely describe the anisotropy of the emission field of any symmetry. For emission fields displaying cylindrical symmetry along the z-axis, the horizontal projection rH of the anisotropy vector vanishes and the value of the parallel component rV becomes equal to the value of r calculated using the classical expression [Eq. (1)]. The time-dependent anisotropy can be described by the time-dependent anisotropy vector r(t) having two components rH(t) and rV(t) defined by Eqs. (21) and (22).
III. CHANGES OF FLUORESCENCE INTENSITY COMPONENTS INDUCED BY LIGHT QUENCHING
We now consider how the anisotropy vector can be used for interpretation of polarized intensity decays under conditions of light quenching. We will consider primarily a two-pulse experiment. The first light pulse excites the sample. The second light pulse, typically at longer wavelengths, causes stimulated emission. This stimulated emission is parallel to the direction of the quenching beam, and is not observed with the usual right angle observation. One observes the emission which has not been quenched.
Light quenching experiments can be performed using polarized excitation, polarized light quenching, and measurement of the polarized emission. If the polarization of the quenching light pulse is parallel to the polarization of the excitation light pulse (parallel quenching) then during the light quenching experiment the vertical projection of the anisotropy vector decreases and the horizontal projection remains equal to zero. The emission field remains cylindrically symmetrical and is described by the two intensity components I‖ and I⊥. The time evolution of these components is given by Eqs. (29) and (30). Assuming that the quenching pulse is short compared to the fluorescence lifetime and rotational diffusion correlation time, both I(t) and r(t) display an instantaneous jump at the quenching pulse arrival time td. The intensity jump can be described by the parameter q defined as
(31)
where Ib and Ia are the total fluorescence intensities immediately before and after the quenching pulse. One has to stress that the parameter q describes the jump of the total fluorescence intensity which for parallel quenching is I=I‖+2I⊥, or I=Ix+Iy+Iz in general. For parallel quenching the jump of the anisotropy can be described by a single parameter Δr defined as
(32)
where rb and ra are the fluorescence anisotropies immediately before and after the quenching pulse. This is possible because under the parallel quenching conditions ΔrH=0 and Δr can be defined as being tantamount to ΔrV.
If the polarization of the quenching light is not parallel to the polarization of the excitation light then both projections of anisotropy vector are affected by the light quenching process. A general description of possible changes of the anisotropy of the emission field may be difficult. In this paper we will discuss only such cases when the emission field before and after the quenching pulse may be described in the same coordinate system (x,y,z). That means we will restrict ourselves to the cases when no rotation of the coordinate system is required to keep the maximum value of the difference between the strongest and weakest intensity component Ix, Iy and Iz of the initial and the light quenching modified emission field. A good example of such case is quenching by light which is polarized perpendicularly with respect to polarization direction of the excitation (perpendicular light quenching). Assume that the z-axis of the coordinate system is directed along the electrical vector of the excitation light and the y-axis along the electrical vector of the quenching light. Under these conditions the time evolution of the intensity components Ix, Iy and Iz is described by Eqs. (26)–(28) with I(t), rH(t), and rV(t) displaying instantaneous jumps at t=td. The jump of the total fluorescence intensity may be described by the parameter q defined by Eq. (31). The jump of the fluorescence anisotropy is related to the anisotropies rb=(rbH, rbV) and ra=(raH, raV) existing immediately before and after the arrival of the quenching pulse. Because the anisotropy rb refers to the cylindrically symmetrical emission field one has rbH=0 and rbV=rb, where
(33)
In this geometry, light quenching changes the values of all intensity components Ix, Iy, and Iz, but the ratio Ix /Iz remains unaffected (see Appendix A for justification of this property). We assume the rotational diffusion correlation time is long compared to the duration of the quenching pulse, so changes of the spatial distribution of the emission dipoles caused by rotational diffusion during the duration time of the quenching pulse can be neglected. Thus, the anisotropy rb can be also expressed by the respective intensity components measured immediately after the quenching pulse. Based on Eq. (33) one obtains
(34)
Taking this into account and applying Eqs. (17) and (18) to the intensity components observed immediately after the quenching pulse one can show that
(35)
This expression indicates that in perpendicular light quenching the possible values of the projections rH and rV of the anisotropy vector after the quenching pulse are linearly dependent. One can see that in perpendicular light quenching the horizontally polarized quenching light almost always affects both the horizontal and vertical projections of the anisotropy vector, except the case rb=−0.5 when only the horizontal projection is modified. All achievable points (raH, raV) are placed on the straight lines passing through the lower right corner of the anisotropy triangle and the initial points (0,rb) (Fig. 7). The limiting vales of the anisotropy ra corresponding to very high intensities of the quenching pulse are placed on the Rx, Rz side of the anisotropy triangle and are related to rb by the equations
(36)
(37)
The limiting value of the magnitude ra of the anisotropy vector ra is given by
(38)
The change of anisotropy at time t=td is characterized by the vector Δr=(ΔrH, ΔrV) with the projections ΔrV and ΔrH defined as
(39)
(40)
Using this notation, the anisotropy of the emission field registered immediately after the quenching pulse may be understood as a sum of two vectors, rb and Δr,
(41)
In light quenching experiments usually rbH=0 and rbV =rb, and then Eq. (35) implies that
(42)
One can see that in the perpendicular light quenching, similarly as in the parallel light quenching, the changes of the intensity components Ix, Iy, and Iz may be described by just two parameters; q and ΔrV or q and ΔrH. We prefer to use q and ΔrH because using Eq. (42) the transformation ΔrV → ΔrH is not possible for rb=−0.5.
IV. DIFFERENTIAL POLARIZED FLUOROMETRY IN THE CASE OF A CYLINDRICALLY SYMMETRICAL EMISSION FIELD
In differential polarized fluorometry the samples are illuminated with linearly polarized, sinusoidally modulated light with the modulation frequency ω, where ω is in rads. Under these conditions the fluorescence emission field is cylindrically symmetrical and is described by two polarized intensity components I‖ and I⊥. Then the phase angle difference Δω between the components and the ratio Λω of the AC signals generated by the two components is measured,10–12
(43)
(44)
where
(45)
(46)
and k=‖,⊥. The quantities Δω and Λω depend on the time-zero anisotropy r0, the modulation frequency ω, and the rate, freedom, and isotropy of fluorophore rotation. Consequently, information about the form of r(t) is available. The meaning of Λω is comparable to that of the intensity ratio of the polarized steady-state intensities. We prefer to present this observable as the modulated anisotropy,13
(47)
Equation (47) may be obtained from Eq. (1) by replacing the intensities I‖ and I⊥ by the respective AC components, AC‖ and AC⊥, of the measured photocurrent and then utilizing Eq. (44). The modulated anisotropy has properties of both the steady-state anisotropy (r) and the fundamental anisotropy (r0). At modulation frequencies which are low compared to the correlation time, rω approaches r. At modulation frequencies much higher than the correlation time, rω approaches r0. The latter property does not fully apply to the light quenching experiments where rω may display remarkable oscillations around r0 at higher modulation frequencies.6–8
V. DIFFERENTIAL ANISOTROPY MEASUREMENTS IN THE CASE WHEN THE EMISSION FIELD IS NOT CYLINDRICALLY SYMMETRICAL
If the emission field is not cylindrically symmetrical then, depending on the direction of observation, one can measure three different values for the phase shift (Δxω, Δyω or Δzω) and three different values for the ratio of the polarized modulated components (Λxω, Λyω or Λzω),
(48)
(49)
(50)
(51)
(52)
(53)
where Nk and Dk are given by Eqs. (45) and (46) with k =x,y,z. From the above six quantities only four are independent, e.g., Δxω is related to Δyω and Δzω, and Λxω is related to Λyω and Λzω,
(54)
It seems that the most convenient way to measure the anisotropy of the emission field which does not display the cylindrical symmetry is to use the right angle observation and measure Δyω and Λyω with vertical orientation of the excitation polarizer. One can then rotate the excitation polarizer to the horizontal orientation, and measure Δzω and Λzω (Fig. 8). These data can then be fit using appropriate models for intensity and anisotropy decay. The quantities Λyω and Λzω may be presented as the modulated horizontal anisotropy
(55)
and/or modulated vertical anisotropy
(56)
Equations (55) and (56) may be obtained on the way analogous to that applied to obtain Eq. (47), using Eqs. (17), (18), (52), and (53). In the cylindrically symmetrical limit of Eqs. (48)–(53) one obtains Δxω=Δyω=Δω, Δzω=0, Λxω=Λyω=Λω, and Λzω=1, yielding rHω=0 and rVω=rω [Eq. (47)]. Similar to rω, the modulated vertical anisotropy and the modulated horizontal anisotropy become at low modulation frequencies the steady-state anisotropies rH and rV, respectively, and at high modulation frequencies much higher then the correlation time—the time-zero anisotropies rH0 and rV0, respectively. In the light quenching experiments at high modulation frequencies rHω and rVω display oscillations around rH0 and rV0, respectively.
VI. INFLUENCE OF LIGHT QUENCHING AND ROTATIONAL DIFFUSION ON THE ANISOTROPY DECAY
In liquid solvents the luminescent molecules perform Brownian rotations due to the thermal motion. This phenomenon causes the relative Contributions of Ix(t), Iy(t), and Iz(t) to the total intensity I(t) to change with time. If the molecules may be treated as nonhindered rotators the result of the Brownian rotations is that the differences between Ix(t), Iy(t), and Iz(t) relative to the total intensity I(t) tend to zero. However, the total intensity I(t)=Ix(t)+Iy(t)+Iz(t) remains independent of the molecular rotation. In the presence of one-pulse or two-pulse light quenching the fluorescence intensity decay takes the form
(57)
where q is defined by Eq. (31), τ is the mean decay time, and td denotes the time delay of the quenching pulse, and I0(t) the intensity decay in the absence of the light quenching pulse. It is assumed that the total fluorescence decay before and after the quenching pulse is described by the same time-dependent function. This may be not applicable in the case of mixtures of fluorescent fluorophores when each fluorophore in the mixture is quenched to a different extent. The explicit expression for the function I0(t), characterizing the luminescence intensity in the absence of light quenching, depends on the particular system under investigation. It can be represented by a single exponential, multiexponential, or any other function. Note that the appropriate forms of equations describing the one-pulse light quenching experiments may be obtained by setting td=0 in the equations describing the two-pulse experiments. The effect of Brownian rotations on the fluorescence anisotropy depends on the symmetry of the luminescent molecules, and the kind and efficiency of the light quenching. A general theoretical description of these phenomena may easily become very complicated. In the following subsections we discuss the influence of light quenching on the emission anisotropy in the simplest cases, i.e., when the fluorescence emission is excited by the linearly polarized light. In these cases the emission field in the absence of light quenching remains cylindrically symmetrical for all times shorter then the time of arrival of the quenching pulse. The discussion will be also limited to the simple light quenching experiments when the quenching pulse is polarized either parallel or perpendicular to the polarization direction of the excitation pulse.
A. Spherical molecules
It has been shown by Perrin14–16 that for spherical molecules the emission anisotropy r(t) of the cylindrically symmetrical emission field decays exponentially with time
(58)
where r0 is the fluorescence anisotropy at t=0 and Θ is the rotational diffusion correlation time. Using the same formalism one can show (see Appendix B) that for spherical molecules generating a noncylindrically symmetrical emission field, the projections rH(t) and rV(t) also decay exponentially,
(59)
(60)
Equations (59) and (60) involve the same time-dependent term exp(−t/Θ). This implies that in this case, due to rotational diffusion, the anisotropy evolves from the arbitrary starting point (rH0, rV0) towards the origin along the straight line. For the case of excitation by the linearly polarized light, accompanied (td=0) or followed (td>0) by the light quenching Eqs. (59) and (60) take the form
The above expressions can be used for calculation of the phase shifts Δkω and ratios Λkω given by Eqs. (48)–(53). After that, by comparison of the calculated values of Δkω and Λkω with those found experimentally, the unknown light quenching parameters q and ΔrH can be evaluated. The parameter ΔrV can be evaluated later from Eq. (38). One has to notice that in general, the parameters q, ΔrH, and ΔrV are highly correlated and may be expressed by a single parameter describing the number of photons passing the light quenching cross section of the molecule during a single quenching pulse. This problem will be treated in more detail in a future paper.
For the parallel light quenching, the emission field remains cylindrically symmetrical for all times, and then Eqs. (66)–(68) simplify to
(69)
(70)
where
(71)
In this case, the number of unknown light quenching parameters is reduced to two, q and Δr, defined by Eqs. (31) and (32).
B. Nonspherical molecules under one-beam or two-beam parallel light quenching
In this case the emission field remains cylindrically symmetrical for the entire fluorescence decay. The z-axis of the coordinate system can be chosen parallel to the symmetry axis of the emission field. Under these conditions the horizontal projection of the anisotropy vector remains equal to zero and the emission anisotropy is fully described by the vertical projection rV(t)=r(t). It has been shown that for nonspherical molecules excited by the linearly polarized light the emission anisotropy decays as a sum of exponentials,17–19
(72)
where the correlation times Θj are expressed by combinations of components of the diffusion tensor, and the amplitudes gj are dependent on the wave functions of the asymmetric rotor, the initial angular distribution of the transition dipoles and the properties of the observation polarizer. The number n of different correlation times may not exceed five. One can expect that light quenching will not change the correlation times Θj, which are determined by the diffusion tensor. However, light quenching can be expected to change the amplitudes gj as a result of modification of the spatial distribution of the transition dipoles. Thus, in the presence of the parallel light quenching the anisotropy decay of nonspherical molecules can be described by the equation
(73)
where are the new, light quenching modified amplitudes associated with the particular correlation times Θp and ra is given by
(74)
Due to possible changes of amplitudes gj, one can anticipate a possibility that certain correlation times which are difficult to retrieve from the classical measurements may become experimentally measurable after the act of light quenching. As for spherical molecules, the anisotropy of the emission field generated by the nonspherical molecules and modified by the process of parallel light quenching also evolves on the anisotropy triangle along the straight line. This line is described by the equation rH=0. To find the expressions for the parallel and perpendicular components of the intensity decay one has to substitute Eq. (57) for I(t) and Eq. (73) for r(t) in Eqs. (29) and (30). These expressions may then be used to calculate the frequency-domain observables, the phase difference Δω and the ratio Λω based on Eqs. (43) and (44), respectively.
C. Nonspherical molecules under two-beam perpendicular light quenching
In this case the emission field will lose cylindrical symmetry after the quenching pulse, and then both projections rH(t) and rV(t) of the anisotropy vector will decay heterogeneously. At present we do not know if the decays of these projections will be described by one common time-dependent function or by two different functions. The additional calculations to solve this problem are not within the scope of this paper. Assuming two different time dependencies for rH(t) and rV(t) one can write
(75)
(76)
where
(77)
and raH is given by Eq. (65). In this case after the quenching pulse the emission anisotropy would not evolve towards the origin along the straight line on the anisotropy triangle. In order to find the intensity decays Ix(t), Iy(t), and Iz(t) one should substitute expressions (57) and (75)–(77) for I(t), rH(t), and rV(t) in Eqs. (26)–(28). Using these new decay functions and Eqs. (48)–(53) one can theoretically predict the phase shifts Δkω and amplitude ratios Λkω. Comparison of the calculated values of Δkω and Λkω may allow determination of the anisotropy changes ΔrH and ΔrV, and the light quenching modified amplitude factors gHj and gVj.
VII. CONCLUSIONS
The phenomenon of light quenching may generate emission fields which do not display cylindrical symmetry. For such fields the generally known definition of the emission anisotropy is not adequate. A new concept called an anisotropy vector is capable of describing the existing state of the emission field of any symmetry. The anisotropy vector is defined in the Cartesian system (rx, ry, rz) and cannot be shown in the laboratory system (x,y,z). The possible orientations of the anisotropy vector are limited to the plane defined by the equation rx+ry+rz=0 which allows for full description of the vector by just two components. In this plane we found a new system (rH, rV) in which the projection rV of the anisotropy vector corresponds to the classical definition of anisotropy with cylindrical symmetry. The relations of the projections rH and rV to the polarized intensity components Ix, Iy, and Iz are given by Eqs. (17) and (18). The projection rH has no analog in the classical anisotropy theory. All possible points (rH, rV) are placed inside an equilateral triangle, which we call the triangle of anisotropy. In the usual anisotropy experiments the horizontal projection, rH, is usually equal to zero. States with a nonzero horizontal projection of the anisotropy vector can be achieved after the act of the perpendicular light quenching. In this case the possible changes of both projections are fully correlated [Eqs. (35) and (42)]. For freely rotating fluorescent molecules, the anisotropy vector tends with time to zero. If the molecules are spherical or display isotropic rotations then, due to rotational diffusion, the anisotropy evolves from any starting point (rH, rV) towards the origin along the straight line. This may not be true for emission fields generated by molecules displaying anisotropic rotations when emission is modified by the perpendicular light quenching. One can expect that for heterogenous anisotropy decay, light quenching may change values of the preexponential factors associated with the observed correlation times.
APPENDIX A
Using the coordinate system shown in Fig. 9, the time dependent intensity components Ix(t) and Iz(t) can be expressed as
(A1)
(A2)
where c1 is a constant, and n(α,β,t) is the angular distribution of the transition moments of the excited molecules at time t. If the electrical vector of the quenching pulse is directed along the y-axis then based on Eq. (44) from Ref. 8 the distribution n(α,β,t) is given by
(A3)
where n0(α,β) is angular distribution of the transition moments of the excited molecules at time t=0 and Sp2 is a certain parameter proportional to the quenching power. One can see from Eq. (A3) that the distribution na(α,β,td) observed immediately after the quenching pulse is related to the distribution nb(α,β,td) observed immediately before the quenching pulse by the equation
(A4)
Equations (A3) and (A4) are strictly valid for modest extents of light-quenching and high levels of quenching. The distribution of depleted fluorophore will be proportional to cos2α, and a somewhat broader distribution will be depleted with larger extents of light-quenching.
Because the integrals over alpha within the pairs Ibx, Ibz and Iax, Iaz are equal to each other, one obtains Ibx /Ibz =Iax /Iaz, independently on the shape of distribution nb(α,β,td) observed immediately before the quenching pulse.
APPENDIX B
The time dependence of the emission anisotropy of Brownian molecules is a function of their orientation. This orientation may be described by nine direction cosines Ci j =cos(i,j), (i=x,y,z; j=X,Y,Z). The direction cosines determine the actual position of the coordinate axes (x,y,z) of the Cartesian system fixed to the molecule, relative to the initial position of these axes (X,Y,Z). It has been shown previously14–16,20 that during the isotropic Brownian motion the mean values of the direction cosines fulfill the relation and . Besides, for spherical molecules one obtains
(B1)
(B2)
where Θ is the rotational diffusion correlation time. The time evolution of the intensity components Ix(t), Iy(t), and Iz(t) may be written in the form
(B3)
where IX0, IY0, and IZ0 are the initial values of these components related to the total initial luminescence intensity I0 by the equation
(B4)
The function α(t) describes the decay of the I0,
(B5)
Using Eqs. (B3) and (B1)–(B2) one can show that for spherical molecules any difference of the intensity components decays according to the relation
(B6)
The anisotropies rH(t) and rV(t) [(Eqs. (21) and (22)] can be represented by linear combinations of such differences [see also discussion following Eqs. (17) and (18)]. After utilizing Eqs. (B5) and (B6), and introducing denotations