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. 2019 Dec 26;14(12):e0227097. doi: 10.1371/journal.pone.0227097

Change of surfactant protein D and A after renal ischemia reperfusion injury

Islam Md Imtiazul 1, Redwan Asma 1, Ji-Hye Lee 2, Nam-Jun Cho 3, Samel Park 3, Ho-Yeon Song 1, Hyo-Wook Gil 3,*
Editor: Partha Mukhopadhyay4
PMCID: PMC6932791  PMID: 31877195

Abstract

Acute kidney injury (AKI) is associated with widespread effects on distant organs, including the lungs. Surfactant protein (SP)-A and SP-D are members of the C-type lectin family, which plays a critical role in host defense and regulation of inflammation in a variety of infections. Serum levels of SP-A and SP-D are markers to reflect lung injury in acute respiratory distress syndrome, idiopathic pulmonary fibrosis, and sarcoidosis. We investigated the change of lung-specific markers, including SP-A and SP-D in an AKI mice model. We studied C57BL/6J mice 4 and 24 hours after an episode of ischemic AKI (23 min of renal pedicle clamping and then reperfusion); numerous derangements were present, including SP-A, SP-D, and lung tight-junction protein. Neutrophil infiltration and apoptosis in the lungs increased in ischemic AKI. Receptor for advanced glycation end products (RAGE) in the lungs, a marker of pneumocyte I, was not changed. Lung tight-junction proteins, particularly claudin-4, claudin-18, and anti-junctional adhesion molecule 1 (JAMA-1), were reduced in 24 hours after AKI. Serum SP-A and SP-D significantly increased in ischemic AKI. SP-A and SP-D in the lungs did not increase in ischemic AKI. The immunohistochemistry showed that the expression of SP-A and SP-D was intact in ischemic AKI. SP-A and SP-D in the kidneys were significantly higher in AKI than in the sham. These patterns of SP-A and SP-D in the kidneys were similar to those of serum. AKI induces apoptosis and inflammation in the lungs. Serum SP-A and SP-D increased in ischemic AKI, but these could have originated from the kidneys. So serum SP-A and SP-D could not reflect lung injury in AKI. Further study is needed to reveal how a change in lung tight-junction protein could influence the prognosis in patients with AKI.

Introduction

Acute kidney injury (AKI) is associated with high mortality and morbidity [13]. Some reports suggest that AKI is a systemic disease that adversely affects other organs including bone, gut, brain, heart, and lungs [47]. The crosstalk between the kidneys and other organs could contribute to the high mortality [8]. Human and experimental animal data support that AKI adversely affects the lungs [9]. The respiratory complication in patients with AKI could develop grave outcomes. Experimental animal study could reveal that AKI itself affects endothelial cell injury because of inflammation and apoptosis in the lungs [9]. Cytokines could be an important mediator to connect the kidneys to the lungs [10, 11]. Recently, it has been reported that early peritoneal dialysis reduces lung inflammation in mice with ischemic acute kidney injury [12]. Revealing and understanding the mechanism of AKI-induced lung injury could improve the outcome in patients with AKI.

Surfactant proteins are mainly produced in type 2 pneumocytes. Surfactant contains four associated proteins, surfactant protein (SP)-A, SP-B, SP-C and SP-D. SP-A and SP-D are members of the C-type lectin family, which plays a critical role in host defense and regulation of inflammation in a variety of infections [13]. Among lung-specific markers, serum levels of SP-A, SP-B, and SP-D have been reported to be increased in acute respiratory distress syndrome [14, 15]. In patients with idiopathic pulmonary fibrosis and sarcoidosis, serum SP-D could predict the extent of parenchymal disease and their survival possibilities [16].

Our hypothesis is that AKI itself could affect the alveolar epithelial cells, causing damage to pneumocytes I and II, which could change the barrier with the change of tight function protein. Therefore, we investigated the change of lung-specific markers including SP-A and SP-D in an AKI mice model.

Materials and methods

Animals

We used 8- to 10-week-old male C57BL/6J mice (all from Korea), weighing 20 to 25 g. All experiments were conducted with adherence to the National Institutes of Health Guide for the Care and Use of Laboratory Animals. The animal protocol was approved by the Animal Care and Use Committee of Soonchunhyang University.

Surgical protocol

Ischemic AKI and a sham operation were performed as previously described [1]. Also, blood was collected and processed as previously described [17], as detailed in S1 Appendix.

Blood was collected by cardiac puncture 4 and 24 hours after the procedure during the sacrificing of the mice by spine dislocation, as detailed in S1 Appendix.

Collection and preparation of BAL samples

After the collection of blood, the trachea of the mice was dissected and cannulated with a 20-G catheter. Lungs were lavaged with 1 ml of phospahte buffer saline (Gibco, USA, pH 7.4) five times. Samples with <80% return were discarded as the BAL samples that are obtained from <80% return of lavage cannot exactly represent the whole lung status. BAL fluid was centrifuged at 1400×g and 4°C for 5 min, and collected the supernatant and finally stored at -70°C for further use.

Blood urea nitrogen and serum creatinine measurement

Blood urea nitrogen (BUN) was measured by a specific quantitative colorimetric assay (Quantichrome Urea Assay Kit) from the BioAssay Systems according to the manufacturer’s protocol [18]. Serum creatinine was measured by another quantitative colorimetric assay (Creatinine Reagent Set) from POINTE SCIENTIFIC following the manufacturer’s instructions.

Cytokine measurement and Surfactant protein measurements

Preparation of lung lysate sample for ELIA and immunoblot were described in S1 Appendix. Interleukin (IL)-6, tumor necrosis factor alpha (TNF-α), monocyte chemoattractant protein-1 (MCP-1), and receptor for advanced glycation end products (RAGE) level were measured in serum by ELISA using the Mouse IL-6 Quantikine ELISA kit, Mouse TNF-α Quantikine ELISA kit, Mouse/Rat CCL2/JE/MCP-1 Quantikine ELISA Kit, and Mouse RAGE Quantikine ELISA Kit (all from R&D Systems, Inc., Minneapolis, MN, USA) following the manufacturer's instructions.

SP-A and SP-D were determined from BAL, lung lysate, the kidneys and serum by ELISA. Mouse Sftpa1 ELISA Kit (Aviva Systems Biology) and Mouse SP-D Quantikine ELISA Kit (R&D systems, Minneapolis, MN) were used following the manufacturer’s instructions to measure SP-A and SP-D respectively.

Immunoblotting analyses of lung tissue

We did western blot analysis as previously described [16], as detailed in S1 Appendix.

The primary antibodies used in our study included: BCL-2-associated X protein (Bax; Cell Signaling Technology, Danvers, MA) and B cell leukemia/lymphoma 2 (Bcl-2; Cell Signaling Technology), Anti-Claudin 3, Anti-Claudin 4, Anti-Claudin 18, Anti-Junctional Adhesion Molecule 1 (JAMA-1) and Anti-beta Actin all from Abcam.

Histological detection of kidney tubular injury and lung injury

We did histopathological assays and immunohistochemical assays following the previously described techniques [19]. In brief, the kidney and lung tissues were embedded in paraffin, sliced into 5-μm thick sections, and stained with routine hematoxylin-eosin and Periodic acid–Schiff (PAS) stain. We scored the tubular damage markers by calculating the percentage of tubules that displayed dilatation, desquamation, vacuolization, necrosis, atrophy, casts, interstitial inflammatory cell infiltration, or edema, as follows: 0, none; 1, ≤ 10%; 2, 11–25%; 3, 26–50%; 4, 51–75%; and 5, ≥ 76%. A semiquantitative assessment of lung infiltration score was carried out according to the following criteria: 0 (rare neutrophils in capillary lumen), 1 (frequent neutrophils in capillary lumen), 2 (extravasation of neutrophils), 3 (aggregation of neutrophils in alveolar wall).

For immunohistochemical assays, SP-A and SP-D (1:1000; Cell Signaling Technology), primary antibodies and anti-rabbit IgG secondary antibody conjugated with biotin (1:1000; LSAB2 kit, Dako-Agilent Technologies, Germany) were used and performed following the protocol provided by Cell Signaling Technology and finally, representing SP-A and SP-D were evaluated using an optical microscope (400×; Carl Zeiss, model Scope.A1).

Statistical analysis

All experiments were done in triplicate. We did statistical analyses using GraphPad Prism 7 software (GraphPad Software Inc., La Jolla, CA). The differences between AKI and sham were compared using an unpaired Student's t-test.

Results

Reduced renal functional and histological damages after ischemic AKI

Serum creatinine levels and urea nitrogen were increased after ischemic AKI compared to the sham. The increase showed a time-dependent trend, since the serum creatinine levels and urea nitrogen at 24 hours (AKI model) were higher than were those at 4 hours (AKI model) (Fig 1A). In addition, the histological examination of the kidney sections indicated greater tubular damage in the kidneys of AKI mice than in those of the sham. The quantitative analysis of tubular injury also showed a higher acute tubular necrosis (ATN) scores for AKI than for the sham. On the other hand, the 24-hour AKI model had a significantly higher rate of kidney damage than did the 4-hour AKI model (Fig 1B).

Fig 1. Change of kidneys in ischemic AKI.

Fig 1

(A) Renal function in C57BL/6 mice renal ischemia reperfusion creatinine and blood urea nitrogen (BUN) evaluated. (B) Kidney sections were subjected to PAS-staining and histological changes were scored. ATN injury scores for PAS-stained kidney sections showed increased tubular injury in ischemic AKI. *p < 0.05 at each time point compared to control.

Increase of serum cytokines after ischemic AKI

Changes of three different cytokines—IL-6, TNF-α, and MCP-1—were measured in the serum of both the AKI and the sham models after renal ischemia reperfusion. The results showed that the amount of all three cytokines (IL-6, TNF-α, and MCP-1) extremely increased in the serum of the AKI model, whereas the amount was significantly low in the sham (Fig 2).

Fig 2. Changes of serum cytokine in ischemic AKI.

Fig 2

Inflammatory cytokines, interleukin (IL)-6, tumor necrosis factor alpha (TNF-α) by protein, and monocyte chemoattractant protein-1 (MCP-1) were measured. *p < 0.05 at each time point compared to control.

Apoptosis and degradation of lung after ischemic AKI

The lung histology showed a significant increase of neutrophil infiltration after ischemic AKI (Fig 3A). AKI-induced apoptosis was found in the lungs of AKI mice. BAX and BCL-2 immunoblot results for the lungs showed that the Bax/Bcl-2 ratio was significantly higher in AKI than in the sham (Fig 3B). RAGE in the lungs, a marker of pneumocytes, was not changed after ischemia reperfusion (Fig 3C). However total protein in BAL increased in the AKI model compared with the sham.

Fig 3. Change of the lungs in ischemic AKI.

Fig 3

(A) Neutrophil infiltration in the lungs was evaluated in ischemic AKI (S1 Fig). (B) Immunoblot of BCL-2-associated X protein (Bax), and B cell leukemia/lymphoma 2 (Bcl-2) were measured. Bax/Bcl-2 ratio in the lungs was identified in ischemic AKI. (C) Receptor for advanced glycation end products (RAGE), marker to reflect pneumocyte I injury in ischemic AKI. (D) Total protein changes in BAL in ischemic AKI. *p < 0.05 at each time point compared to control.

According to the immunoblot results, the expression of different tight-junction proteins, particularly claudin-4, claudin-18, and JAMA-1, was reduced in the 24-hour AKI model compared to the sham, but the expression of claudin-3 was similar in both models (Fig 4).

Fig 4. Change of lung tight-junction protein in ischemic AKI.

Fig 4

Alveolar permeability barrier tight-junction proteins were measured by immunoblot. Claudin-4, claudin-18, and JAMA-1. *p < 0.05 at each time point compared to control.

Different types of change of surfactant protein D and A after ischemic AKI

Serum level of SP-A significantly increased in 4- and 24-hour AKI compared to each sham. The serum level of SP-D significantly increased in the 24- hour AKI. The BAL level of SP-D was significantly higher in the 24-hour AKI, but SP-A in BAL showed no significant changes. The SP-A and SP-D in the lungs showed no significant differences between AKI and sham (Fig 5). The immunohistochemistry showed the presence of SP-A and SP-D in the lung tissue of AKI and sham, and these protein expressions were intact in the 4- and 24-hour AKI (Fig 6). These finding suggest that pneumocyte II is intact. SP-A and SP-D in the kidneys were significantly higher in AKI than in the sham. These patterns of SP-A and SP-D in the kidneys were similar to those of serum.

Fig 5. Change of SP-A and SP-D in ischemic AKI.

Fig 5

SP-A and SP-D in serum changed significantly in ischemic AKI. SP-A and SP-D in the lungs showed no changes in ischemic AKI. SP-A and SP-D in the kidneys were significantly different in AKI than in the sham. *p < 0.05 at each time points compared to control.

Fig 6. Presence of SP-A and SP-D in the lung of sham and AKI.

Fig 6

Immunohistochemical localization of SP-A and SP-D in experimental animal lung. The immunohistochemistry showed the expression of SP-A and SP-D in ischemic AKI.

Discussion

The mortality of AKI-associated acute lung injury (ALI) is still high, but the main mechanism is not clear yet [2, 3]. ALI is essentially a noncardiogenic pulmonary edema that occurs in the context of increased alveolar fluid secondary to an increase in lung endothelial or epithelial permeability and/or a decrease in the efficiency of clearance of interstitial fluid [1, 4]. Clinically, the mechanism of lung injury after acute renal injury is considered to be important for improving prognosis in these patients.

Our study showed an increase in blood cytokine consistent with previous reports [5]. These cytokines might be involved with lung injury. We showed that both lung infiltration and an apoptosis marker increased after renal ischemia reperfusion. Our study confirmed that renal ischemia reperfusion crosstalks with other organs, consistent with previous studies [1920].

SP-A and SP-D play important roles in innate immunity and in the modulation of inflammation in pulmonary infections [6, 7]. Also serum SP-A and SP-D might be good indicators to reflect the lung injury in many lung diseases [810]. But there is no report about the change of serum SP-A and SP-D after AKI. We found that serum SP-A and SP-D increased after renal ischemia reperfusion. According to the result of our study, the expression trend of SP-A and SP-D is different from each other. SP-D responds in latent phase while SP-A has more timely response and increased early after ischemia reperfusion injury. These results are similar to our previously reported study where we showed the changes of SP-A and D after the injection of paraquat [21]. Moreover, SP-A could show an early response to stress like the previous report [22]. In addition, the immunohistochemistry results showed that the expression of these proteins did not change in the lungs. Also, there was no change of these protein levels in the lungs. Although SP-D in BAL is increased at 24 hours, SP-A and RAGE, which are pneumocyte I markers, were not changed after renal ischemia reperfusion. Although SP-A and SP-D are predominantly expressed in the lungs, they are also expressed in other tissues/organs including the kidneys. A recent study showed that lipopolysaccharide can increase SP-A synthesis in human renal epithelial cells through sequentially activating the TLA-4-related MERK1-ERK1/1-NF-κB-dependent pathway [11]. Also, other reports showed that SP-A and SP-D attenuated kidney injury by modulating inflammation and apoptosis [1214], but they did not investigate the blood level of SP-A and SP-D or lung injury. In our study, changes of SP-A and SP-D levels in the kidneys were similar to the serum changes of these proteins. We think that the serum SP-A level could reflect kidney injury, but SP-D could originate with both the kidneys and the lungs, because the increase of SP-D in BAL resulted from loss of the tight-junction protein. Also, our results suggested that AKI may increase serum SP-A and SP-D levels; hence AKI should be considered when interpreting the results of SP-A and SP-D in pulmonary disease.

We investigated the lung tight-junction protein because the protein in BAL increased, although there was no damage of pneumocyte I and II. We think these could reflect leakage between the lungs and blood in alveolar space. Also, increased infiltration and apoptosis could be involved with changes of lung architecture. We showed that the tight-junction protein decreased. The apoptosis causes the degradation of the alveolar barrier by down-regulating the expression of tight-junction proteins, especially claudin-4, that inhibit alveolar fluid clearance, In our study we also found the reduced expression of claudin-4, claudin-18, and JAMA-1, which could explain the high incidence of bacteremia incidence in patients with AKI and pneumonia.

In summary, we concluded that serum SP-A and SP-D increased after renal ischemia reperfusion, but these could have originated in the kidneys; so serum SP-A and D could not reflect lung injury in AKI. After renal ischemia reperfusion, lung inflammation and apoptosis increased, which influenced the lung tight-junction protein. Our schematic overview is shown in Fig 7. Further study needs to reveal how tight-junction protein change could influence the prognosis in patients with AKI and pneumonia.

Fig 7. Schematic of AKI and lung crosstalk.

Fig 7

Supporting information

S1 Appendix. Supplementary materials and methods.

(DOCX)

S1 Fig. Neutrophil infiltration in the lungs after ischemic kidney injury.

(TIF)

S1 Raw Images. Original images for western blots.

(PDF)

S1 File. ARRIVE Guidelines checklist.

(PDF)

Data Availability

All relevant data are within the manuscript and its Supporting Information files.

Funding Statement

This research was supported by a grant of the Korea Health Technology R&D Project through the Korea Health Industry Development Institute (KHIDI), funded by the Ministry of Health & Welfare, Republic of Korea (HI17C-2059-010017) and Soonchunhyang University Research Fund. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

References

  • 1.Wald R, McArthur E, Adhikari NK, Bagshaw SM, Burns KE, Garg AX, et al. Changing incidence and outcomes following dialysis-requiring acute kidney injury among critically ill adults: a population-based cohort study. Am J Kidney Dis. 2015;65(6):870–7. 10.1053/j.ajkd.2014.10.017 [DOI] [PubMed] [Google Scholar]
  • 2.Park S, Lee S, Jo HA, Han K, Kim Y, An JN, et al. Epidemiology of continuous renal replacement therapy in Korea: Results from the National Health Insurance Service claims database from 2005 to 2016. Kidney Res Clin Pract. 2018;37(2):119–29. 10.23876/j.krcp.2018.37.2.119 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 3.Metnitz PG, Krenn CG, Steltzer H, Lang T, Ploder J, Lenz K, et al. Effect of acute renal failure requiring renal replacement therapy on outcome in critically ill patients. Crit Care Med. 2002;30(9):2051–8. 10.1097/00003246-200209000-00016 [DOI] [PubMed] [Google Scholar]
  • 4.Lee SA, Cozzi M, Bush EL, Rabb H. Distant Organ Dysfunction in Acute Kidney Injury: A Review. Am J Kidney Dis. 2018;72(6):846–56. 10.1053/j.ajkd.2018.03.028 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.Lee J, Ko YS, Lee HY, Yang J, Oh S, Jo SK, et al. The role of senescence of bone marrow cells in acute kidney injury. Kidney Res Clin Pract. 2019;38(1):25–32. 10.23876/j.krcp.18.0114 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 6.Zhang J, Ankawi G, Sun J, Digvijay K, Yin Y, Rosner MH, et al. Gut-kidney crosstalk in septic acute kidney injury. Crit Care. 2018;22(1):117 10.1186/s13054-018-2040-y [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Fox BM, Gil HW, Kirkbride-Romeo L, Bagchi RA, Wennersten SA, Haefner KR, et al. Metabolomics assessment reveals oxidative stress and altered energy production in the heart after ischemic acute kidney injury in mice. Kidney Int. 2019;95(3):590–610. 10.1016/j.kint.2018.10.020 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 8.Doi K, Rabb H. Impact of acute kidney injury on distant organ function: recent findings and potential therapeutic targets. Kidney Int. 2016;89(3):555–64. 10.1016/j.kint.2015.11.019 [DOI] [PubMed] [Google Scholar]
  • 9.Faubel S, Edelstein CL. Mechanisms and mediators of lung injury after acute kidney injury. Nat Rev Nephrol. 2016;12(1):48–60. 10.1038/nrneph.2015.158 [DOI] [PubMed] [Google Scholar]
  • 10.Andres-Hernando A, Okamura K, Bhargava R, Kiekhaefer CM, Soranno D, Kirkbride-Romeo LA, et al. Circulating IL-6 upregulates IL-10 production in splenic CD4(+) T cells and limits acute kidney injury-induced lung inflammation. Kidney Int. 2017;91(5):1057–69. 10.1016/j.kint.2016.12.014 [DOI] [PubMed] [Google Scholar]
  • 11.Ahuja N, Andres-Hernando A, Altmann C, Bhargava R, Bacalja J, Webb RG, et al. Circulating IL-6 mediates lung injury via CXCL1 production after acute kidney injury in mice. Am J Physiol Renal Physiol. 2012;303(6):F864–72. 10.1152/ajprenal.00025.2012 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 12.Altmann C, Ahuja N, Kiekhaefer CM, Andres Hernando A, Okamura K, Bhargava R, et al. Early peritoneal dialysis reduces lung inflammation in mice with ischemic acute kidney injury. Kidney Int. 2017;92(2):365–76. 10.1016/j.kint.2017.01.020 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 13.Wright JR. Immunoregulatory functions of surfactant proteins. Nat Rev Immunol. 2005;5(1):58–68. 10.1038/nri1528 [DOI] [PubMed] [Google Scholar]
  • 14.Park J, Pabon M, Choi AMK, Siempos II, Fredenburgh LE, Baron RM, et al. Plasma surfactant protein-D as a diagnostic biomarker for acute respiratory distress syndrome: validation in US and Korean cohorts. BMC Pulm Med. 2017;17(1):204 10.1186/s12890-017-0532-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Determann RM, Royakkers AA, Haitsma JJ, Zhang H, Slutsky AS, Ranieri VM, et al. Plasma levels of surfactant protein D and KL-6 for evaluation of lung injury in critically ill mechanically ventilated patients. BMC Pulm Med. 2010;10:6 10.1186/1471-2466-10-6 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Takahashi H, Fujishima T, Koba H, Murakami S, Kurokawa K, Shibuya Y, et al. Serum surfactant proteins A and D as prognostic factors in idiopathic pulmonary fibrosis and their relationship to disease extent. Am J Respir Crit Care Med. 2000;162(3 Pt 1):1109–14. [DOI] [PubMed] [Google Scholar]
  • 17.Hoke TS, Douglas IS, Klein CL, He Z, Fang W, Thurman JM, et al. Acute renal failure after bilateral nephrectomy is associated with cytokine-mediated pulmonary injury. J Am Soc Nephrol. 2007;18(1):155–64. 10.1681/ASN.2006050494 [DOI] [PubMed] [Google Scholar]
  • 18.Eddy WE, Gong KQ, Bell B, Parks WC, Ziegler SF, Manicone AM. Stat5 Is Required for CD103(+) Dendritic Cell and Alveolar Macrophage Development and Protection from Lung Injury. J Immunol. 2017;198(12):4813–22. 10.4049/jimmunol.1601777 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Freitas SH, Doria RGS, Bueno RS, Rocha WB, Filho JRE, Moraes JRE, et al. Evaluation of potential changes in liver and lung tissue of rats in an ischemia-reperfusion injury model (modified pringle maneuver). PLoS One. 2017;12(6):e0178665 10.1371/journal.pone.0178665 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Ko GJ, Rabb H, Hassoun HT. Kidney-lung crosstalk in the critically ill patient. Blood Purif. 2009;28(2):75–83. 10.1159/000218087 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Gil HW, Oh MH, Woo KM, Lee EY, Oh MH, Hong SY. Relationship between pulmonary surfactant protein and lipid peroxidation in lung injury due to paraquat intoxication in rats. Korean J Intern Med. 2007;22(2):67–72. 10.3904/kjim.2007.22.2.67 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Sugahara K, Iyama K, Sano K, Kuroki Y, Akino T, Matsumoto M. Overexpression of surfactant protein SP-A, SP-B, and SP-C mRNA in rat lungs with lipopolysaccharide-induced injury. Lab Invest. 1996;74(1):209–20. [PubMed] [Google Scholar]

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Change of surfactant protein D and A after renal ischemia reperfusion injury

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Reviewer #1: The manuscript entitled “Change of surfactant protein D and A after renal ischemia reperfusion injury” suggested a link between serum surfactant protein and renal ischemia reperfusion models. Furthermore, increased lung inflammation and apoptosis were observed due to change of lung tight-junction protein. The authors demonstrated the cross-talk between organs (kidney and lung), however, several concerns must be addressed.

<major concerns="">

- The information in the manuscript does not provide a very well-explainable data between AKI and surfactant protein. Albeit further study will be required in the future, certain conclusion must be given in the manuscript. Therefore, it is pretty tricky to consider the overall ideas the authors provided. The authors need to provide schematic overview of these results for the readers to understand easily.

- There are too much information on materials and methods. The authors need to make it simplify.

- General figure image quality is too poor. It is very difficult to recognize clearly (histology, graph and western blot). It must be addressed to increase image quality (more than 300DPI).

- In results part, the “sub-title” must summarize the results obtained. There is no information of the sub-title the authors provided in the manuscript. It will be re-organized.

- The methods used are described in FIGURE LEGEND. Do not state the results in the FIGURE LEGEND.

For example,

(FIG 1A) Renal function in C57BL/6 mice renal ischemia reperfusion blood urea nitrogen (BUN) and creatinine “increased” --> “evaluated”;

(FIG 1B) Tubular injury necrosis scores for PAS-stained kidney sections showed increased tubular injury in ischemic AKI --> kidney sections were subjected to PAS-staining and histological changes were scored.

- Fig3B and Fig4 Western blot images, the bands were cut group by group. The authors must provide the entire row immune-blotting bands. Do not cut (or split) the Western bands.

<minor concerns="">

- Figure1A, the order of graphs (BUN and creatine) should be changed. The manuscript stated serum creatinine and BUN (in the results). Try to make the consistency.

- Figure1B, please indicate the areas of tubular damage (i.e. using arrow head)

- Line 182, “protein in BAL increased in the AKI”. Which protein? How to measure? Or any protein changes between shame and AKI models?

- There is no scale bars on Figures1,3 and5 (microscopic images)

- In figure2, put Blood serum on top of the graphs to recognize them easily.

- In figure3A, how to measure neutrophil infiltration? By FACS or by count? If it was evaluated by count, only 1-2 neutrophils in the field? Make them more clarify.

-In figure4 Western blotting, there is no information about the bands. Once again, do not split the western blot images.

Reviewer #2: The authors reported changes of SP-A and SP-D in an AKI mice model at different time points and compared serum and kidney SP-A & SP-D changes to other organ specific markers. They concluded that kidney-originated SP-A/D changes could not be ruled out and thus the two markers are unsuitable for determining AKI-related lung injury. The overall experimental design is adequate, however more details in animal experiments are welcomed. I have a few comments/questions:

In Materials and methods, please indicate sex of animals used.

How was animal sacrifice performed? Spine dislocation or anesthetic overdose? Please specify.

Please define ‘80% return’ in BAL collection paragraph and specify pH or product number of PBS used.

Did you conduct PBS flush of lung vasculature before extracting BAL? why or why not?

Which parts of centrifugated serum or BAL samples were kept? Please specify.

In results:

In SP-A and SP-D assays, error bars are relatively outstanding. Specifically, Lung SP-A protein assay displayed inconsistency in 24h sham group, can the author address the cause of this anomaly? 4hr sham groups and 24h sham group underwent similar surgical procedures, and yet SP-A protein in kidney shows reduction in 24hr sham vs. 4hr sham. Which leads to suspicion that the ‘sham’ surgery is too invasive and disruptive to kidney function, Can the authors please address this phenomenon?

In some data presentation, one group presents much more substantial error bar than other groups. In common knowledge, age and body weight controlled mice are expected to have very consistent biological and biochemical profile under consistent modeling technique. I have to say that the data quality is questionable.

In multiple graphs, SP-A and SP-D shows different trends, it would appear to me that SP-D responds in latent phase while SP-A has more timely response and increased very soon after ischemia reperfusion injury occurs. Why we should look at both targets at the same time, and how do we interpret the difference in their responses? I hope the authors can give a bit discussion in this aspect.

The topic brought up by the authors warrants attention, however the results are of less that satisfying quality. It would be great if well controlled experiments are performed and consistent data is presented, then the same conclusions will be much more convincing.

 </minor></major>

**********

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PLoS One. 2019 Dec 26;14(12):e0227097. doi: 10.1371/journal.pone.0227097.r002

Author response to Decision Letter 0


24 Nov 2019

Dear Partha Mukhopadhyay, Ph.D.

Academic Editor, PLOS ONE

Thank you so much for your comments. I am glad to see your comments, indicating that I have a chance to revise my manuscript. Following the reviewer’s comments, I have amended my manuscript as written below. In text, the changes and corrections have been highlighted by yellow color and green color changes mean deleted sentences. I hope you would review it again and I hope for the honor of accepting my scientific writing in your highly authorized journal.

Reviewer 1 comments

Reviewer #1: The manuscript entitled “Change of surfactant protein D and A after renal ischemia reperfusion injury” suggested a link between serum surfactant protein and renal ischemia reperfusion models. Furthermore, increased lung inflammation and apoptosis were observed due to change of lung tight-junction protein. The authors demonstrated the crosstalk between organs (kidney and lung), however, several concerns must be addressed.

Comment 1. The information in the manuscript does not provide a very well-explainable data between AKI and surfactant protein. Albeit further study will be required in the future, certain conclusion must be given in the manuscript. Therefore, it is pretty tricky to consider the overall ideas the authors provided. The authors need to provide schematic overview of these results for the readers to understand easily.

Answer: Thank you for your kind suggestion. A schematic overview has been added in the revised manuscript. Kindly, check the figure 7 in the revised manuscript.

Comment 2. There is too much information on materials and methods. The authors need to make it simplify.

Answer: We have simplified the materials and methods according to the suggestion in the revised manuscript. Some details of materials and methods have been transferred in supplementary document.

Comment 3. General figure image quality is too poor. It is very difficult to recognize clearly (histology, graph and western blot). It must be addressed to increase image quality (more than 300DPI).

Answer: We have improved the resolution of all figures. The image quality has been increased according to the suggestion in the revised manuscript.

Comment 4. In results part, the “sub-title” must summarize the results obtained. There is no information of the sub-title the authors provided in the manuscript. It will be re-organized.

Answer: The subtitles of the result part have been reorganized and the summarized result has been added to the result subtitles of the revised manuscript.

Comment 5. The methods used are described in FIGURE LEGEND. Do not state the results in the FIGURE LEGEND.

For example,

(FIG 1A) Renal function in C57BL/6 mice renal ischemia reperfusion blood urea nitrogen (BUN) and creatinine “increased” --> “evaluated”;

(FIG 1B) Tubular injury necrosis scores for PAS-stained kidney sections showed increased tubular injury in ischemic AKI --> kidney sections were subjected to PAS-staining and histological changes were scored.

Answer: The figure legends have been changed according to your comment.

Comment 6. Fig 3B and Fig4 Western blot images, the bands were cut group by group. The authors must provide the entire row immune-blotting bands. Do not cut (or split) the Western bands.

Answer: Thank you for the suggestion and the entire row immune-blotting bands has been provided according to the suggestion in the revised manuscript. When we did western blot, the band order is 24hr sham, 24hr AKI, 4hr Sham, and 4hr AKI. I am afraid that these band order make readers confused.

Comment 7. Figure1A, the order of graphs (BUN and creatine) should be changed. The manuscript stated serum creatinine and BUN (in the results). Try to make the consistency.

Answer: Thank you for the observation. The correction has been done in the revised manuscript.

Comment 8. Figure1B, please indicate the areas of tubular damage (i.e. using arrowhead)

Answer: Thank you for the suggestion. The arrow has been provided to indicate the areas of tubular damage in the figure 1B in the revised manuscript.

Comment 9. Line 182, “protein in BAL increased in the AKI”. Which protein? How to measure? Or any protein changes between shame and AKI models?

Answer: In previous manuscript “protein in BAL increased in the AKI” meant the “total protein” in BAL increased in AKI compared to sham. The total protein in the BAL of all sham and AKI models was measured by using Pierce BCA Protein Assay Kit (Thermo Fisher Scientific). The result showed that the amount of total protein in BAL was higher in AKI than sham.

Comment 10. There is no scale bars on Figures1, 3 and 5 (microscopic images)

Answer: The scale bars have been inserted.

Comment 11. In figure 2, put Blood serum on top of the graphs to recognize them easily.

Answer: The modification has been done in the revised manuscript according to the suggestion.

Comment 12. In figure 3A, how to measure neutrophil infiltration? By FACS or by count? If it was evaluated by count, only 1-2 neutrophils in the field? Make them more clarify.

Answer: Yes, we measured the neutrophil infiltration by counting and the count is correct. The pathologist scored the neutrophil count on a 400-fold slide as follows.

0 (rare neutrophils in capillary lumen), 1 (frequent neutrophils in capillary lumen), 2 (extravasation of neutrophils), 3 (aggregation of neutrophils in alveolar wall).

Comment 13. In figure 4 Western blotting, there is no information about the bands. Once again, do not split the western blot images.

Answer: Thank you for showing us the mistake and we believe it will help us to improve the quality of our article. The information and whole western blot picture have been added to the revised manuscript.

Reviewer 2 comments

Reviewer #2: The authors reported changes of SP-A and SP-D in an AKI mice model at different time points and compared serum and kidney SP-A & SP-D changes to other organ specific markers. They concluded that kidney-originated SP-A/D changes could not be ruled out and thus the two markers are unsuitable for determining AKI-related lung injury. The overall experimental design is adequate, however more details in animal experiments are welcomed. I have a few comments/questions:

Comment 1. In Materials and methods, please indicate sex of animals used.

Answer: In the revised manuscript we have added the sex (male) of the animals.

Comment 2. How was animal sacrifice performed? Spine dislocation or anesthetic overdose? Please specify.

Answer: We sacrificed our animals by spine dislocation method. In the revised manuscript the information is specified, kindly, find the added information in the revised manuscript.

Comment 3. Please define ‘80% return’ in BAL collection paragraph and specify pH or product number of PBS used.

Answer: Thank you for the question and it had helped us to solve the typing mistake. Previously we mistakenly wrote samples with 80% return were discarded instead of samples with �80% return was discarded. Normally, BAL contains different biochemical and cytological indicators that represent the status of whole lung but the BAL samples that are obtained from �80% return of lavage cannot exactly represent the whole lung status, so we discarded all the samples with �80% return of lavage.

In the revised manuscript we have corrected the information from 80% to �80% as well as specified the pH (7.4) and the product information (Gibco, USA) for the PBS.

Comment 4. Did you conduct PBS flush of lung vasculature before extracting BAL? why or why not?

Answer: We did not conduct PBS flush. We think that PBS flush could influence the tight junction barrier because of flush pressure. Also, we did follow previous reports (Kidney Int. 2017 Aug;92(2):365-376, Kidney Int. 2017 May;91(5):1057-1069.)

Comment 5. Which parts of centrifugated serum or BAL samples were kept? Please specify.

Answer: We stored the supernatant of the centrifuged serum and BAL. This information is specified in the revised manuscript.

Comment 6. In results:

In SP-A and SP-D assays, error bars are relatively outstanding. Specifically, Lung SP-A protein assay displayed inconsistency in 24h sham group, can the author address the cause of this anomaly? 4hr sham groups and 24h sham group underwent similar surgical procedures, and yet SP-A protein in kidney shows reduction in 24hr sham vs. 4hr sham. Which leads to suspicion that the ‘sham’ surgery is too invasive and disruptive to kidney function, Can the authors please address this phenomenon?

Answer: When we made the sham group, we tried to follow the same procedure as AKI model except for ischemic reperfusion. I have already published that Sham itself affect heart metabolites (Kidney Int. 2019 Mar;95(3):590-610). Although we had made effort to be less invasive when making sham, but sham operation itself could be engaged with injury. BUN, Creatinine and kidney histology are stable in both two shams.

Comment 7. In results:

In some data presentation, one group presents much more substantial error bar than other groups. In common knowledge, age and body weight-controlled mice are expected to have very consistent biological and biochemical profile under consistent modeling technique. I have to say that the data quality is questionable.

Answer: BUN/Cr showed similar values in same groups. But some surfactant protein values have wide range. This might be an individual difference in response to IR, but it is thought that this may be a wide range because the amount (pg/ml) of surfactant protein is very small compared to bun/cr (mg/dl).

Comment 8. In results:

In multiple graphs, SP-A and SP-D shows different trends, it would appear to me that SP-D responds in latent phase while SP-A has more timely response and increased very soon after ischemia reperfusion injury occurs. Why we should look at both targets at the same time, and how do we interpret the difference in their responses? I hope the authors can give a bit discussion in this aspect.

Answer: Thank you for your excellent comment. We checked surfactant protein A and D change after paraquat injection. (Korean J Intern Med. 2007 Jun;22(2):67-72.) The current pattern is similar with this study. I agree that SP-A has early response to stress (Lab Invest. 1996 Jan;74(1):209-20.). We have incorporated these in discussion section.

Comment 9. The topic brought up by the authors warrants attention, however the results are of less that satisfying quality. It would be great if well controlled experiments are performed and consistent data is presented, then the same conclusions will be much more convincing.

Answer: Thank you for the valuable comment. I think that further study needs more numbers of animals in each group and should uncover the role of surfactant protein in each specific organ. For the future direction, we will design experimental study to prove the crosstalk of surfactant proteins between kidney and lung in mice and validate this employing human data.

Attachment

Submitted filename: Response_to_Reviewers_20191115.docx

Decision Letter 1

Partha Mukhopadhyay

6 Dec 2019

PONE-D-19-26349R1

Change of surfactant protein D and A after renal ischemia reperfusion injury

PLOS ONE

Dear Dr Gil,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Your manuscript was reviewed by same reviewers and we received positive feedback from them. However, numerous errors and minor technical questions raised by one of the reviewers.

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We look forward to receiving your revised manuscript.

Kind regards,

Partha Mukhopadhyay, Ph.D.

Academic Editor

PLOS ONE

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: (No Response)

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

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Reviewer #1: Yes

Reviewer #2: Yes

**********

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PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: 1. In Fig1A, Y axis of the graphs, mg/dL and mg/dl are mixed. Make them consistent.

2. In the manuscript, put the full name of ATN (might be “Acute tubular necrosis”), related with Fig1B

3. In Fig3A, H&E staining for neutrophil is not clear to determine NP infiltration. The evaluation of NP infiltration was done by pathologist according to the authors explanation and it was fully understandable. However, please perform MPO staining to confirm NP infiltration on those sites and put that data on Supporting figure?

4. In Fig4 (western blot), JAMA-1 or JAM-A? clarify

5. In Fig4, Claudin 3 , Claudin 4, Claudin 18 and Claudin-3, Claudin-4, Claudin-18 are mixed. Make them consistent.

6. In Fig6, the staining SP-A and SP-D was not still clear. Please count SP-A and SP-D positive cells and add one other graph how many positive cells were counted in each group.

Reviewer #2: The authors has included additional materials supplementing the findings and completing the data presentations. previous concerns are addressed by additional descriptions or discussion.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

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Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2019 Dec 26;14(12):e0227097. doi: 10.1371/journal.pone.0227097.r004

Author response to Decision Letter 1


11 Dec 2019

Dear Partha Mukhopadhyay, Ph.D.

Academic Editor, PLOS ONE

Thank you so much for your comments. I am glad to see your comments, indicating that I have a chance to revise my manuscript. Following the reviewer’s comments, I have amended my manuscript as written below. In text, the changes and corrections have been highlighted by yellow color and green color changes mean deleted sentences. I hope you would review it again and I hope for the honor of accepting my scientific writing in your highly authorized journal.

Reviewer 1 comments

Comment 1. In Fig 1A, Y axis of the graphs, mg/dL and mg/dl are mixed. Make them consistent.

Answer: Thank you for showing us the mistake and we hope it will help us to upgrade the quality of our manuscript. The correction has been completed and we have made mg/dl consistent in Fig 1A in the revised manuscript.

Comment 2. In the manuscript, put the full name of ATN (might be “Acute tubular necrosis”), related with Fig 1B

Answer: Thank you for the suggestion. We have added the full name of Acute tubular necrosis (ATN) in the revised manuscript. Kindly check the revised manuscript, page 6, line 132 and 138.

Comment 3. In Fig 3A, H&E staining for neutrophil is not clear to determine NP infiltration. The evaluation of NP infiltration was done by pathologist according to the authors explanation and it was fully understandable. However, please perform MPO staining to confirm NP infiltration on those sites and put that data on Supporting figure?

Answer: Thank you for the good comment. I agree with your point. Unfortunately, there is a problem with the block, which is not suitable for MPO staining. Considering what we can technically do, we took the picture by x 1000 times and added as a supplementary figure in the revised manuscript. Kindly, check the supplementary Fig S1 in the supplementary document and additionally we have provided the picture below:

Comment 4. In Fig 4 (western blot), JAMA-1 or JAM-A? clarify

Answer: Thank you for showing us the mistake. In the Fig 4 it will be JAMA-1 (anti-junctional adhesion molecule 1) and we have corrected the Fig 4 in the revised manuscript.

Comment 5. In Fig 4, Claudin 3, Claudin 4, Claudin 18 and Claudin-3, Claudin-4, Claudin-18 are mixed. Make them consistent.

Answer: Thank you for the suggestion. In the Fig 4, the correction has been completed according to the reviewer’s comment.

Comment 6. In Fig 6, the staining SP-A and SP-D was not still clear. Please count SP-A and SP-D positive cells and add one other graph how many positive cells were counted in each group.

Answer: Thank you for the suggestion. We have counted the SP-A and SP-D positive cells per HPF. We also insert the additional graph in Fig 6 in the revised manuscript.

Attachment

Submitted filename: Response_to_Reviewers_20191210.docx

Decision Letter 2

Partha Mukhopadhyay

13 Dec 2019

Change of surfactant protein D and A after renal ischemia reperfusion injury

PONE-D-19-26349R2

Dear Dr. Gil,

We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements.

Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication.

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With kind regards,

Partha Mukhopadhyay, Ph.D.

Section Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Acceptance letter

Partha Mukhopadhyay

17 Dec 2019

PONE-D-19-26349R2

Change of surfactant protein D and A after renal ischemia reperfusion injury

Dear Dr. Gil:

I am pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

For any other questions or concerns, please email plosone@plos.org.

Thank you for submitting your work to PLOS ONE.

With kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Partha Mukhopadhyay

Section Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Appendix. Supplementary materials and methods.

    (DOCX)

    S1 Fig. Neutrophil infiltration in the lungs after ischemic kidney injury.

    (TIF)

    S1 Raw Images. Original images for western blots.

    (PDF)

    S1 File. ARRIVE Guidelines checklist.

    (PDF)

    Attachment

    Submitted filename: Response_to_Reviewers_20191115.docx

    Attachment

    Submitted filename: Response_to_Reviewers_20191210.docx

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting Information files.


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