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. 2020 Jan 14;29:105132. doi: 10.1016/j.dib.2020.105132

Data on winged insect dynamics in melon crops in southeastern France

Alexandra Schoeny 1,, Patrick Gognalons 1
PMCID: PMC6992952  PMID: 32016141

Abstract

This article displays insect count data obtained in eleven field trials conducted between 2010 and 2019 in southeastern France. Winged insect abundances were monitored daily within melon crops during 8–11 weeks in May–July using a suction trap or a yellow pan trap. Aphids were identified under a stereomicroscope. In total, 29,709 winged aphids belonging to 216 taxa and 151,061 other flying insects were caught. Among possible uses, these data can populate larger multisite studies or larger time series investigating aphid community variations. They can also feed generic studies exploring temporal dependencies or species assemblages. They can stimulate new collaborations with entomologists keen on implementing molecular tools or taxonomic expertise on a large specimen collection.

Keywords: Aphid communities, Biodiversity, Insect sampling, Species composition and population dynamic, Suction trap, Taxonomic identification, Temporal pattern of flight activity, Yellow pan trap


Specifications Table

Subject Agricultural and Biological Sciences
Specific subject area Entomology
Type of data Tables and figures
How data were acquired Winged aphids were identified under a stereomicroscope using taxonomic keys.
Data format Raw and summarized
Parameters for data collection Eleven field experiments were conducted between 2010 and 2019. Winged insects were monitored daily within melon crops during 8–11 weeks in May–July.
Description of data collection Winged insects were sampled at the crop height with a suction trap placed in the crop. For three of the trials, an additional sampling was carried out with a yellow pan trap. Both types of catches were collected daily, rinsed and stored in 70% ethanol until sorting (aphids vs other insects) and taxonomic identification of aphids under a stereomicroscope.
Data source location INRAE St Paul experimental station, Avignon, France
43°54′53N, 4°52′59E
43.9147222, 4.8830555
INRAE St Maurice experimental station, Montfavet Avignon, France
43°56′49N, 4°51′52E
43.9469444, 4.8644444
Data accessibility Summarized data are hosted with the article.
Raw data are hosted in a public repository
Repository name: Data INRAE (Dataverse)
Data identification number: 10.15454/NKRWEO
Direct URL to data: https://doi.org/10.15454/NKRWEO
Value of the Data
  • These daily abundances are useful to characterize and compare the temporal patterns of 206 aphid taxa visiting melon plants cultivated in one geographical area (Avignon) during eight cropping seasons.

  • These data can benefit other scientists keen to add Avignon datasets in a multisite analysis focusing on a particular aphid taxon or interested in species richness and diversity. They can also populate larger time series investigating community assemblage variations in a context of climate change for instance.

  • The data can feed generic studies exploring temporal dependencies or species assemblages.

  • The data can be useful to compare different insect trapping methods and could stimulate other teams to develop the suction trap described in this paper.

  • Most data correspond to stored specimens that could be shared with entomologists interested in the taxonomic identification of non-aphid taxa, or the implementation of molecular tools to genotype a given taxon or identify a particular gene (insecticide resistance for instance).

1. Data

Table 1 presents the melon crop details for each of the 11 field trials: location, date of planting, trial area, number of plants, number of rows, number of plants per row, row spacing and plant spacing.

Table 1.

Melon crop details for field trials conducted in Avignon between 2010 and 2019.

Trial code Experimental site Planting date Trial area (m2) Number of plants Number of rows Number of plants per row Row spacing (m) Plant spacing (m)
M10 St Paul 28/05/2010 256 160 8 20 2 0.8
V11 St Paul 09/05/2011a 120 120 6 20 2 0.5
V12 St Paul 11/05/2012a 150 150 6 25 2 0.5
V13 St Paul 06/05/2013a 150 150 6 25 2 0.5
P11 St Paul 24/05/2011 156 208 16 13 1.5 0.5
P12 St Paul 31/05/2012 180 240 16 15 1.5 0.5
P13 St Paul 24/05/2013 180 240 16 15 1.5 0.5
P14 St Paul 27/05/2014 180 240 16 15 1.5 0.5
P15 St Paul 28/05/2015 180 240 16 15 1.5 0.5
M18 St Maurice 25/05/2018 120 160 8 20 1.5 0.5
M19 St Maurice 28/05/2019 120 160 8 20 1.5 0.5
a

Agryl P17 fleece removal; fleece optimizes plant growth by increasing both air and soil temperatures and reducing wind damage.

Table 2 presents the 216 aphid taxa recorded during the insect monitoring conducted in Avignon between 2010 and 2019.

Table 2.

List of aphid taxa recorded during the 2010–2019 monitoring and their corresponding INRA or Rothamsted Insect Survey (RIS) codes.

Taxon name Taxon code
Acyrthosiphon caraganae RIS-755
Acyrthosiphon loti RIS-381
Acyrthosiphon malvae RIS-382
Acyrthosiphon pisum RIS-389
Acyrthosiphon primulae RIS-392
Acyrthosiphon spp RIS-1014
Adelges spp RIS-2065
Amphorophora rubi RIS-468
Anoecia corni RIS-480
Anoecia spp RIS-1012
Anuraphis farfarae RIS-238
Anuraphis spp RIS-1015
Anuraphis subterranea RIS-239
Aphis (Protaphis) anuraphoides INRA-001
Aphis (Protaphis) spp RIS-1064
Aphis (Protaphis) terricola INRA-002
Aphis armoraciae INRA-003
Aphis craccivora RIS-163
Aphis fabae RIS-132
Aphis gossypii RIS-181
Aphis nasturtii RIS-152
Aphis nerii RIS-787
Aphis pomi RIS-153
Aphis salicariae RIS-142
Aphis sambuci RIS-125
Aphis spp RIS-1005
Aphis verbasci RIS-197
Aploneura lentisci RIS-530
Appendiseta robiniae RIS-793
Aspidaphis adjuvans RIS-260
Atheroides serrulatus RIS-59
Aulacorthum solani RIS-376
Aulacorthum speyeri RIS-377
Baizongia pistaceae RIS-531
Betulaphis quadrituberculata RIS-84
Brachycaudus cardui RIS-241
Brachycaudus helichrysi RIS-243
Brachycaudus populi RIS-747
Brachycaudus rumexicolens RIS-253
Brachycaudus schwartzi RIS-745
Brachycaudus sedi RIS-254
Brachycaudus spp RIS-1016
Brachycaudus tragopogonis RIS-252
Brachycolus cucubali RIS-262
Brevicoryne brassicae RIS-264
Calaphis flava RIS-82
Callipterinella minutissima RIS-80
Capitophorus carduinus RIS-341
Capitophorus elaeagni RIS-342
Capitophorus hippophaes RIS-343
Capitophorus horni RIS-344
Capitophorus similis RIS-346
Capitophorus spp RIS-1018
Cavariella aegopodii RIS-292
Cavariella archangelicae RIS-293
Cavariella spp RIS-1046
Cavariella theobaldi RIS-298
Ceruraphis eriophori RIS-211
Chaetosiphon fragaefolii RIS-287
Chaetosiphon tetrarhodum RIS-289
Chaitophorus leucomelas RIS-50
Chaitophorus populeti RIS-45
Chaitophorus populialbae RIS-46
Chaitophorus salicti RIS-47
Chaitophorus spp RIS-1002
Chromaphis juglandicola RIS-61
Chromaphis spp RIS-1078
Clethrobius comes RIS-87
Coloradoa rufomaculata RIS-280
Coloradoa spp RIS-1020
Coloradoa tanacetina RIS-281
Corylobium avellanae RIS-403
Cryptomyzus ribis RIS-340
Ctenocallis setosus RIS-77
Diuraphis (Holcaphis) spp RIS-1502
Diuraphis muehlei RIS-259
Diuraphis noxia RIS-809
Drepanosiphum platanoidis RIS-91
Dysaphis plantaginea RIS-234
Dysaphis pyri RIS-235
Dysaphis spp RIS-1006
Ericaphis ericae RIS-284
Eriosoma lanigerum RIS-497
Eriosoma spp RIS-1010
Eriosoma ulmi RIS-500
Essigella californica INRA-005
Essigella spp RIS-1518
Eucallipterus tiliae RIS-70
Eucarazzia elegans RIS-768
Euceraphis punctipennis RIS-88
Forda formicaria RIS-527
Geoica setulosa RIS-532
Geoica spp RIS-1055
Hayhurstia atriplicis RIS-261
Hayhurstia spp RIS-1022
Hoplocallis pictus RIS-772
Hyadaphis coriandri RIS-808
Hyadaphis foeniculi RIS-271
Hyadaphis spp RIS-1023
Hyalopteroides humilis RIS-276
Hyalopterus pruni RIS-110
Hyalopterus spp RIS-1065
Hyperomyzus lactucae RIS-358
Hyperomyzus lampsanae RIS-359
Hyperomyzus pallidus RIS-360
Hyperomyzus picridis RIS-362
Hyperomyzus spp RIS-1007
Illinoia goldamaryae RIS-475
Lipaphis erysimi RIS-267
Macchiatiella rhamni INRA-007
Macrosiphoniella absinthii RIS-451
Macrosiphoniella oblonga RIS-461
Macrosiphoniella persequens RIS-462
Macrosiphoniella sanborni RIS-456
Macrosiphoniella spp RIS-1027
Macrosiphoniella tapuskae RIS-732
Macrosiphum euphorbiae RIS-410
Macrosiphum rosae RIS-416
Macrosiphum spp RIS-1009
Megoura viciae RIS-470
Melanaphis bambusae RIS-811
Melanaphis luzulella RIS-122
Melanaphis pyraria RIS-727
Metopolophium albidum RIS-395
Metopolophium dirhodum RIS-396
Metopolophium festucae RIS-397
Metopolophium frisicum RIS-398
Metopolophium spp RIS-1008
Microlophium spp RIS-2014
Mimeuria ulmiphila RIS-510
Mindarus abietinus RIS-491
Monelliopsis caryae RIS-801
Myzocallis castanicola RIS-63
Myzocallis coryli RIS-64
Myzocallis komareki INRA-009
Myzocallis occidentalis INRA-010
Myzocallis spp RIS-1003
Myzotoxoptera spp RIS-1077
Myzotoxoptera wimshurstae RIS-364
Myzus cerasi RIS-312
Myzus ligustri RIS-320
Myzus lythri RIS-314
Myzus ornatus RIS-315
Myzus persicae RIS-322
Myzus spp RIS-1030
Myzus varians RIS-740
Nasonovia pilosellae RIS-354
Nasonovia ribisnigri RIS-355
Nasonovia spp RIS-1011
Nearctaphis bakeri RIS-733
Ovatus insitus RIS-303
Ovatus spp RIS-1025
Paracletus cimiciformis RIS-525
Pemphigus spp RIS-1506
Phorodon cannabis RIS-812
Phorodon humuli RIS-308
Phylloxera spp RIS-2003
Pleotrichophorus glandulosus RIS-350
Pseudacaudella rubida RIS-275
Pterocallis alni RIS-75
Rhodobium porosum RIS-401
Rhopalomyzus poae RIS-309
Rhopalosiphoninus ribesinus RIS-367
Rhopalosiphum insertum RIS-111
Rhopalosiphum maidis RIS-112
Rhopalosiphum nymphaeae RIS-113
Rhopalosiphum padi RIS-114
Rhopalosiphum rufiabdominale RIS-2009
Rhopalosiphum rufulum RIS-739
Rhopalosiphum spp RIS-1045
Schizaphis graminum RIS-116
Schizaphis palustris RIS-115
Schizaphis pilipes RIS-750
Schizaphis scirpi RIS-121
Semiaphis dauci RIS-728
Semiaphis spp RIS-1088
Sipha elegans RIS-52
Sipha maydis RIS-54
Sitobion avenae RIS-420
Sitobion fragariae RIS-421
Sitobion spp RIS-1031
Smynthurodes betae RIS-526
Staegeriella necopinata RIS-273
Subsaltusaphis picta RIS-738
Taiwanaphis spp INRA-012
Takecallis arundicolens RIS-72
Takecallis arundinariae RIS-73
Takecallis taiwanus RIS-74
Tetraneura nigriabdominalis RIS-2008
Tetraneura spp RIS-1037
Tetraneura ulmi RIS-503
Thelaxes dryophila RIS-490
Thelaxes spp RIS-1038
Therioaphis luteola RIS-92
Therioaphis ononidis RIS-93
Therioaphis riehmi RIS-731
Therioaphis spp RIS-1039
Therioaphis trifolii RIS-94
Tinocallis kahawaluokalani RIS-795
Tinocallis takachihoensis RIS-797
Tuberculatus (Tuberculoides) spp RIS-1024
Tuberculatus annulatus RIS-68
Tuberculatus borealis RIS-758
Tuberculatus neglectus RIS-759
Tuberculatus querceus RIS-69
Tuberolachnus salignus RIS-23
Uroleucon (Uroleucon) spp INRA-015
Uroleucon (Uromelan) spp RIS-1504
Uroleucon ambrosiae INRA-013
Uroleucon compositae INRA-014
Uroleucon erigeronense RIS-763
Uroleucon tussilaginis RIS-439
Utamphorophora humboldti RIS-751
Wahlgreniella nervata RIS-782
Wahlgreniella spp RIS-1042
Wahlgreniella vaccinii RIS-479

Table 3 presents a summary of airborne insect monitoring in 11 field trials conducted in Avignon between 2010 and 2019. In total, 29,709 winged aphids and 151,061 other flying insects were caught. According to the dataset, the abundance of winged aphids varied between 431 and 4206; the abundance of other flying insects varied between 1169 and 23,139. Per dataset, aphids represented between 5 and 35% of the catch. Between 35 and 107 aphid taxa were recorded per dataset. A small proportion of aphids (0.3–2.5% per dataset) could not be assigned to a taxon because of i) limit of taxonomic expertise, ii) loss during storage, or iii) damage during trapping.

Table 3.

Summary of airborne insect monitoring in 11 field trials conducted in Avignon between 2010 and 2019.

Dataset code Trial code Trapping method Monitoring period (days) Number of winged aphids Number of other flying insects Ratio aphids/total catch (%) Number of aphid taxa identified Number of aphids not assigned to a taxona
M10 M10 Suction 64 3532 14 871 19 107 81
V11 V11 Suction 74 3128 16 423 16 92 13
V12 V12 Suction 66 4206 23 139 15 95 106
V13 V13 Suction 80 2998 13 488 18 99 17
P11 P11 Suction 65 3306 17 924 16 91 19
P12 P12 Suction 56 3602 11 499 24 75 57
P13 P13 Suction 62 1848 7571 20 80 5
P14 P14 Suction 59 1457 9346 13 62 7
P15 P15 Suction 56 2245 7825 22 51 18
P15Y P15 Yellow pan 56 518 1169 31 35 8
M18 M18 Suction 55 786 15 660 5 81 4
M18Y M18 Yellow pan 55 431 2132 17 49 5
M19 M19 Suction 58 835 8476 9 76 6
M19Y M19 Yellow pan 58 817 1538 35 52 7
MIN 55 431 1169 5 35 4
MAX 80 4206 23 139 35 107 106
TOTAL 29 709 151 061
a

Aphids that could not be identified because of i) limit of taxonomic expertise, ii) loss during storage, or iii) damage during trapping.

Fig. 1 illustrates the main trapping method used to monitor winged insects in each of the 11 trials (suction trap).

Fig. 1.

Fig. 1

Suction trap used to monitor winged insects in eleven field trials conducted in Avignon between 2010 and 2019. (A) In situ in a melon crop (Photo credit: Alexandra Schoeny, INRAE) (B) Schematic representation of a suction trap adapted from Pascal et al., 2013 [2] showing its operating principle and its different parts: ➊ vacuum chamber, ➋ air extractor, ➌ insect collector, ➍ collecting pot, ➎ chimney rain cap.

Fig. 2 illustrates a complementary trapping method (yellow pan trap) used in three of the 11 trials.

Fig. 2.

Fig. 2

Yellow pan trap used to monitor winged insects in three of the eleven field trials conducted in Avignon between 2010 and 2019 (Photo credit: Alexandra Schoeny, INRAE).

2. Experimental design, materials, and methods

  • 1.

    Field experiments

Eleven field experiments were conducted between 2010 and 2019 at INRAE Avignon, southeastern France: nine at St Paul experimental station (43°54′53N, 4°52′59E) and two at St Maurice experimental station (43°56′49N, 4°51′52E) (Table 1). The two sites are approximately 4 km apart and surrounded by a highly diversified environment consisting of discontinuous urban fabric, commercial units, arable land, permanent crops (vineyards, fruit trees, olive groves), pastures and mixed forest, according to CORINE land cover nomenclature [1].

The experimental design consisted of a Charentais-type melon crop which layout varied according to trials (Table 1). Seedlings were prepared in an insect-proof greenhouse three weeks before planting. Depending on the trial, plants at the 1–3 leaf stage were planted in late April or late May on dark brown plastic mulch with drip irrigation. Early plantings were protected from wind damage with Agryl P17 fleece (Fiberweb France, Biesheim) for 11–15 days. The crop comprised 120 to 240 plants (0.5–0.8 m plant spacing) organized in 6–16 rows (1.5–2 m row spacing) depending on the trial. No insecticides were applied during trials.

  • 2.

    Insect trapping and winged aphid identification

A non-biased suction trap was designed to sample winged insects daily at the crop height [2]. It is made up of a vacuum chamber generating a downward suction, an air extractor (400 m3/h, 160B model, France Air), an insect collector and a chimney rain cap (Fig. 1). The insect collector is inserted in the vacuum chamber. Small insects flying above the vacuum chamber opening are catched and dragged in a collecting pot containing 100 ml of water with 5 μl/l detergent (Teepol 610 S, ref 86350, Sigma-Aldrich) to break the surface tension and prevent insects from escaping. Each trial was equipped with a suction trap set up in the melon crop. The trap runned daily for a 12-h sequence (8:00 a.m. - 8:00 p.m.) thanks to a timer. The collecting pot was changed daily before the start of the trapping.

For three of the 11 field trials, winged insects were also sampled with a yellow pan trap (model FLORA cultures basses, ref 058501, SigneNature) placed at 2–3 m from the suction trap (Fig. 2). The trap was filled with 1 l of water with 5 μl/l detergent and changed daily at 8:00 a.m.

Airborne insect monitoring started at crop planting or fleece removal to avoid bias caused by a possible visual repellent effect of the fleece on winged aphid behaviour. Depending on the trial, it was carried out for 55–80 days. Catches were collected daily, rinsed with tap water and stored in 70% ethanol until sorting (aphids vs other insects) and taxonomic identification (aphids only) under a stereomicroscope. Aphids were identified based on morphological characteristics using several dichotomous keys [[3], [4], [5]] and counted. Individuals which could not be identified to species were grouped at genus level.

Whenever possible, aphid species/genera were associated with their Rothamsted Insect Survey (RIS) codes (Table 2). For aphid taxa not yet referenced in the RIS system, INRA codes were assigned.

Acknowledgments

We thank Joël Béraud, Michel Pascal and the team IE-PV for their involvement in field experiments; Frédéric Pascal for his technical assistance in suction trap setting-up; Grégory Girardot, Jonathan Gaudin, Antoine Lauvernay and trainees for their help in insect collecting; Loup Rimbaud for constructive comments on this manuscript. We also thank Lynda Alderson from Rothansted Research for providing updated list of RIS codes. This study was funded by INRA (AAP2010 Gestion durable des résistances-ParcelR), Agence Nationale de la Recherche (ANR-2010-STRA-001-01 VirAphid) and Ministère de l’Agriculture, de l’Alimentation et de l’Environnement (CTPS 25-C-2011-09 and CASDAR 12–1278 Agath).

Footnotes

Appendix A

Supplementary data to this article can be found online at https://doi.org/10.1016/j.dib.2020.105132.

Conflict of Interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Appendix A. Supplementary data

The following is the Supplementary data to this article:

Multimedia component 1
mmc1.xml (1KB, xml)

References

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Associated Data

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Supplementary Materials

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