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PLOS ONE logoLink to PLOS ONE
. 2020 Feb 3;15(2):e0228209. doi: 10.1371/journal.pone.0228209

Sinking of microbial-associated microplastics in natural waters

Thu Ha Nguyen 1,*, Fiona H M Tang 1, Federico Maggi 1
Editor: Matthäus Bäbler2
PMCID: PMC6996825  PMID: 32012181

Abstract

Degraded plastic debris has been found in nearly all waters within and nearby urban developments as well as in the open oceans. Natural removal of suspended microplastics (MPs) by deposition is often limited by their excess buoyancy relative to water, but this can change with the attachment of biological matter. The extent to which the attached biological ballast affects MP dynamics is still not well characterised. Here, we experimentally demonstrate using a novel OMCEC (Optical Measurement of CEll colonisation) system that the biological fraction of MP aggregates has substantial control over their size, shape and, most importantly, their settling velocity. Polyurethane MP aggregates made of 80% biological ballast had an average size almost twice of those containing 5% biological ballast, and sank about two times slower. Based on our experiments, we introduce a settling velocity equation that accounts for different biological content as well as the irregular fractal structure of MP aggregates. This equation can capture the settling velocity of both virgin MPs and microbial-associated MP aggregates in our experiment with 7% error and can be used as a preliminary tool to estimate the vertical transport of MP aggregates made of different polymers and types of microbial ballast.

Introduction

The global plastic production has reached 348 million tonnes in 2017 [1] for household, retail, and industrial demands. However, plastic production and use have not been accompanied by efficient plastic waste management, and consequently, 1 to 4% of this plastic amount reaches the ocean every year [2, 3]. Microplastics (MPs) with size smaller than 5 mm is the most common plastic debris found in marine habitats [4]. MPs consist of polymers with different densities; the most commonly produced polymers belong to polypropylene (PP) and polyethylene families (LDPE, LLDPE, MDPE, HDPE) with density ranging from 0.83 to 0.97 g cm−3, followed by polyvinyl chloride (PVC), polyurethane (PUR), and polyethylene terephthalate (PET) with density ranging from 1.16 to 1.56 g cm−3 [1, 5]. MPs contain toxic additives like phthalate, organotin, nonylphenol, polybrominated diphenyl ethers (PBDE), and triclosan, which can be released if degraded chemically or biologically [6, 7]. MPs have the peculiarity to sorb and be the carrier agent of anthropogenic pollutants such as dichloro-diphenyl-trichloroethane (DDT), polychlorinated biphenyl (PCBs), and phenanthrene [810], but can also leach other embedded organic compounds known to be metabolized by attached microorganisms [11]. Having sizes similar to plankton, MPs can become part of the aquatic micro-ecosystems, favour microbial activity, be transferred to the higher trophic levels, and carry harmful chemicals into the food web as substantiated by more than 245 scientific studies [12].

Various governance strategies and regulations have been enacted over the years to reduce the sources of pollution affecting marine environments. The first global legislation is the International Convention for the Prevention of Pollution from Ships (MARPOL 73/78) signed in 1973 by 134 countries, but this alone has not effectively reduced plastic pollution in open waters. More recently, the G7 and the EU Community have committed to sustainable plastic management by increasing plastic reuse and reducing plastic waste [13, 14]. These, along with other initiatives, have received growing attention and are contributing to lowering plastic and MP pollution in some jurisdictions such as through the ban of lightweight plastic bags and microbeads in cosmetics [1518]. At a larger scale, the UN Environment Programme has established strategies and guidelines to increase the global awareness of plastic pollution and recycling, as well as improve global plastic waste management [1921]. More initiatives are being conceptualized or are under scrutiny to enhance their effectiveness, but we underline that they should be accompanied by research incentives to increase our understanding of MP residence time in the water column, which is crucial to quantify impacts on the ecosystem [22] and develop remediation plans.

MP pollution has received growing attention in the scientific community in the past decade, but the majority of research efforts have concentrated on MP sources and their impacts on aquatic organisms and human health, while little attention has been paid on understanding their movement in the environment and open waters in particular. MP residence time in the water column is the most crucial factor determining whether MPs are naturally removed by settling and burying within deposited sediment [23] or if they remain in suspension and escalate the bioaccumulation pathway along the food chain [24]. The residence time of a particle is conventionally estimated from its settling velocity, which depends on its physical properties and hydrodynamics. The particle properties such as size and internal geometry determine the sinking rate, but these properties can be altered by the growth of biological ballast [25], i.e., the attached microorganisms and their metabolic byproducts; hydrodynamic effects of this ballast can have substantial repercussions on the overall mass flux. Earlier studies [2629] have quantified the sinking rate of MPs incorporating biological matter but no study up to now has simultaneously measured the sinking rate and the biological fraction on individual aggregates made of multiple materials. This leaves an important knowledge gap in the understanding of the mechanisms that control MP dynamics along the water column.

Here, we aim to investigate the extent to which biological ballast can alter the geometrical properties and terminal velocity of MP aggregates. We therefore question what impacts microbial colonisation can have on MP residence time in natural waters. We conducted this investigation using our unique fully-controlled settling column (largely described in [30, 31]) equipped with the new OMCEC (Optical Measurement of CEll colonisation) system developed and tested as described in [32]. OMCEC simultaneously performs micro Particle Tracking Velocimetry (μPTV) and light spectral analysis, and instantaneously measures three quantities of interest for individual microparticles including material composition, geometric properties (size and shape), and motion (direction and speed) in a non-invasive and non-destructive way. We tested polyurethane MPs within the size range of 90 to 300 μm incubated with microorganisms sampled from a brackish river in Australia. Using these data, we developed and tested a terminal velocity equation that considers the shape irregularity and fractal structures of microbial-associated MP aggregates.

Materials and methods

Material preparation

MPs were generated from blue Polyurethane (PUR) pipes (RS. 483-5765) by manual sawing; sawdust was sieved to sizes between 90 and 300 μm. Sawing emulated the genesis of irregularly shaped MPs due to physical/mechanical forcing, which is widely observed in natural waters [33].

Natural microorganisms were sampled from the top 10 cm of the Hawkesbury River, NSW, Australia, in August 2018 (winter) using a plankton net with 20 μm aperture. The sampling site (33°24.12’ S, 151° 0.3’ E) is about 50 km upstream of the ocean and the measured brackish water density was 1.007 g/cm3. The sampled biological matter included free-living microorganisms larger than the mesh size as well as aggregates of microrganisms of different types and sizes. Based on microscope observation (S1a Fig) and the literature on the Hawkesbury River ecosystems [34], the sampled microorganisms may include freshwater/brackish diatom genus Cyclotella, marine planktonic diatoms Thalassiosira spp., Ditylum brightwellii, Rhizosolenia setigera, Pseudo-nitzschia pungens and Chaetoceros spp, and bacteria that attached on the aggregates. The natural microorganism sample was transferred into two 600 mL glass beakers with 100 mL in each beaker and was diluted with Hawkesbury river water at a dilution factor of 5. The river water was filtered through a 0.8 μm membrane prior to incubation to remove other types of suspended particulate matter such as fine minerals. The suspensions in the glass beakers were added with 5 mM NaNO3 and 5 mM glucose, and were then agitated on the orbital shaker EOM5 at 100 rpm, at 20°C, under a 9:15 light:dark cycle with light being generated by a 13 W bulb in the laboratory for two weeks. This pre-incubation procedure increased the microbial population and may cause the selection of some microbial species as compared to the natural community.

Experimental procedure and image acquisition with the OMCEC system

The OMCEC (Optical Measurement of CEll Colonisation) system was developed to overcome existing limitations in the observation and systematic measurements of suspended matter in water [32]. OMCEC can simultaneously perform material composition analysis, geometric characterisation, and motion detection of individual aggregates using different wavelength emissions, a high-quality optical system, and real-time image processing algorithms for micro Particle Tracking Velocimetry (μPTV). OMCEC can be used in combination with staining techniques on non-living materials that have similar emission spectra to biological matter [32], while blue plastic was chosen in this study to be distinguished from biological matter. OMCEC optics include a Prosilica GT3400C colour CCD equipped with a high magnification Navitar 12X Body Tube lens and a light sheet generated by optic fibers connected to a 3.7 W, 400 lumens cool white Cree LED [30]. To measure biological and MP fractions, size, shape, and settling velocity of individual MP aggregates, we used 2.75 μm per pixel CCD resolution with a field of view of 5.5 mm x 7.5 mm and camera acquisition frequency of 3.054 frames per second.

The OMCEC optical system was coupled to our fully-controlled settling column (described in [30]) that can replicate environmental hydrodynamic conditions using an adjustable turbulence generation system consisting of a scalable oscillating grid. The settling column includes a flocculation section (upper part, 210 mm x 140 mm x 600 mm) that hosts the turbulence generation system and a measuring section (lower part, 210 mm x 140 mm x 270 mm) where the OMCEC optical system resides; the two sections are separated by a diaphragm that opens during aggregate sampling (S2 Fig).

The experimental incubation and image acquisition were conducted within the settling column to minimize disturbance to the formation of microbial-associated MP aggregates. The flocculation section was filled with 8 L of filtered Hawkesbury river water added with 0.1 g L−1 MPs, 10 mM NaNO3, 10 mM glucose, and 1 L of the pre-incubated microbial sample. The settling column was loosely capped, and an 8 L of head space was available to allow sufficient gas exchange between atmosphere and the water column. The suspension was mixed for 30 minutes in every two hours at a turbulence shear rate of 20 s−1 for 7 days to aerate the suspension and provide sufficient time for MPs and microorganisms to interact. After 7 days of mixing, MP aggregates were allowed to freely settle through a 5 mm hole in the diaphragm into the OMCEC detector, which was filled with filtered Hawkesbury river water. OMCEC acquisitions were conducted every 8 minutes and lasted 4 minutes. The grid was stopped during the μPTV acquisitions and oscillated at 20 s−1 between acquisitions. Two frames were taken per acquisition for the motion detection.

OMCEC image processing algorithms

Raw images from the acquisition were first systematically processed to increase brightness, remove noise, and isolate individual in-focus aggregate images (detailed in [32]). The aggregate images were then analysed to retrieve the aggregate geometrical properties as follows. The aggregate size (L) is calculated as the minimum square enveloping the aggregate image [35]; the projected area (A) is calculated as the sum of aggregate image pixels; and the outer perimeter (P) is the length of the aggregate outer edge. The aggregate shape was experimentally evaluated through area- and perimeter-based shape factors b = A/L2, c = P/L, respectively. The aggregate settling velocity (v) is measured by OMCEC as the vertical distance travelled by an aggregate over the time difference between two consecutive frames [30].

OMCEC detects MPs and biological ballast in each aggregate by the difference in emission wavelengths between blue MPs (below 500 nm) and yellowish biological ballast (above 500 nm). Prior to the main experiment, we acquired and processed images of two control samples (i.e., MP-only and biological-only) under the same acquisition conditions and processing algorithms as for the main experiment. All pixels of the control aggregate images were scattered over the (Rp + Gp, Bp + Gp) space, with Rp, Gp, and Bp being the red, green, and blue intensities of each pixel (Fig 1). The 99% confidence limits were then determined for each materials, and the bisector of the two confidence limit lines was the threshold line (Fig 1) as

I=0.73(Rp+Gp)+15.35, (1)

where I is the threshold intensity used for material classification. OMCEC assigns a pixel of an aggregate image as microplastics if its Bp + Gp > I, or as biological ballast if otherwise. We chose (Rp + Gp), and (Bp + Gp) as the references for segmentation because they showed the least error as compared to other channel pairs.

Fig 1. Threshold graph for material segmentation.

Fig 1

The blue and yellow dots are pixels of MP-only and biological-only control samples, respectively. Rp, Gp, Bp are the red, green, and blue intensity of a pixel, respectively.

The biological fraction fb of an aggregate was next estimated as the number of biological pixels over the number of aggregate pixels as a first approximation of the biological content in the three-dimensional aggregate from its two-dimensional projection upon the assumption that every projection of the aggregate has statistically similar material distribution. Hence, the MP fraction was calculated as fMP = 1 − fb. This thresholding method resulted in 1.44% error for the MP-only sample and 4.97% error for the biological-only sample.

Modelling of terminal velocity

The terminal velocity v* of an aggregate moving in a fluid is the velocity (settling or rising) when the aggregate attains a balance of gravitational force Fg, buoyancy force Fb, and resistance force Fd exerted by the fluid on the moving aggregate. The most common expression of Fd is through the Stoke’s law [36] where Fd equals the viscous drag Fv. However, the Stoke’s law applies to spherical aggregates with Reynolds number Re ≪ 1 when inertial terms are negligible and is not applicable when Re increases beyond 1. More generally, Fd can be calculated using an empirical drag coefficient Cd typically expressed as a function of Re and aggregate shape (e.g., [37, 38]). To avoid empirical Cd, [39] and [40] used Rubey’s approach [41] to model v* of organic-associated, sphere-equivalent sediment aggregates considering Fd = Fv + Fi, where Fi is the impact force exerted by fluid particle colliding onto the aggregate surface. Following [39] and [40], we extend the use of the close-form equation for v* applicable to biological-associated MP aggregates. There are possibly other forces that come into play when v* increases or when the shape departs from a sphere such as the added mass inertia [42], the Basset–Bousinnesq inertia [43, 44] and others, which are not explicitly accounted for here. Therefore, the force balance describing the motion of an aggregate can be written as [3941]

Fg+Fb+Fv+Fi=n^1Vρg+n^2Vρfg+n^33μPv*+n^414Aρfv*2=0, (2)

where V, A, and P are the aggregate solid volume, projected area, and outer perimeter, while ρ, ρf, and μ are the aggregate density, fluid density, and fluid viscosity, respectively. n^1, n^2, n^3, and n^4 are unit vectors representing the directions of Fg, Fb, Fv, and Fi, respectively. ‖g‖ is the magnitude of the gravitational acceleration vector g, and v*=v*/n^v* is the magnitude of the terminal velocity vector v* with n^v* being the direction of v*. The resistance forces Fv and Fi have direction opposite to n^v*, i.e., n^3=n^4=n^v*. By solving the force balance in Eq 2 for equilibrium (∑F = 0), we obtained

n^1Vρgn^1Vρfgn^v*3μPv*n^v*n^v*14Aρf(v*n^v*)2=0. (3)

Solving the quadratic Eq 3 for v* results in

v*=23μP±(3μP)2+n^1n^v*Aρfg(ρρf)VAρfn^v*. (4)

For a floating aggregate, v* = 0 implies ρ = ρf and the acceptable solution of Eq 4 is for the positive root square. More importantly, Eq 4 can describe both the settling and rising velocity of different types of suspended aggregates depending on the aggregate density ρ and fluid density ρf, where ρ = ∑ρi fi is a function of the density of each constituent material ρi and its fraction fi. An aggregate settles when ρ > ρf, floats when ρ = ρf, and rises when ρ < ρf. The sign of vector v* depends on the sign of n^1 and n^v*. For a reference system where the vertical axis is positive downward, n^1=1, and the settling aggregates have n^v*=1. Hence, the terminal velocity vector v* for settling aggregates becomes

v*=23μP+(3μP)2+Aρfg(ρρf)VAρf>0,sinkingforρ>ρf, (5)

which corresponds to the equation in [39, 40]. For rising aggregates, n^v*=1, and v* becomes

v*=23μP(3μP)2Aρfg(ρρf)VAρf<0,risingforρ<ρf. (6)

Eq 4 is valid when the Reynolds number Re < 10 because the original equation in [41] was shown to overestimate the drag forces when Re ≫ 10 [45].

Here, we used Eq 4 to calculate the terminal velocity of the aggregates obtained from the main experiment with various biological fractions fb. The aggregate density ρ is calculated as

ρ=fbρb+(1fb)ρMP, (7)

where ρb and ρMP are biological and MP densities, respectively. To lessen the number of experimental parameters used in Eq 4, we calculate A and P of the aggregates as a function of L exploiting the shape irregularity of the aggregates analysed later in the Results section as

A=bLL2, (8)
P=cLL, (9)

where bL and cL are the estimated shape factors by linear fitting of experimental shape factors b and c against L as bL = p1bL + p2b and cL = p1cL + p2c (see Results section). Aggregates observed in this study and the report in [26] suggest that microbial-associated MP aggregates possess fractal structure, which can be represented by fractal dimension 1 ≤ d ≤ 3. The aggregate solid volume V (i.e., excluding the pore volume Ve = aL3[1 − (L/Lp)d−3]) was calculated using the nonlinear fractal scaling

V=aL3(L/Lp)(d3), (10)

where a is the volume-based shape factor of the aggregate. While a reflects the external shape of the aggregate as compared to a cube of the same size, the fractal dimension d presents its internal structure, i.e., loose or compact. d is described here after [46] as

d=δ(L/Lp)αγwithα={0,fb0.021,fb>0.02, (11)

where Lp and δ are the size and fractal dimension of the smallest aggregate in a sample, respectively, and γ is the fractal scaling parameter representing the rate of change in d over the aggregate dimensionless size L/Lp. The two-parameter Heaviside function is applied in Eq 11 to take into account the compact internal structure of virgin MPs (i.e., fb ≤ 0.02 in this study) with fractal dimension d ≈ 3 regardless of size L.

Parameters a, γ, and ρb in Eq 4 were unknown and thus were estimated against the experimental settling velocity v using PEST [47] (see Results section).

Ethics statement

The sampling of natural microorganisms and river water did not require permit because it was conducted in a public access section of the river. We confirm that the field study did not involve endangered or protected species.

Results

Biological colonisation on MP aggregates

Our experimental data include 702 high-resolution images of irregularly-shaped polyurethane MP aggregates colonised by microorganisms (see examples in Fig 2 and S1b Fig). We retrieved the biological fraction (fb between 0 and 1) using the OMCEC system to quantify the microbial colonisation level. Observations spanned nearly the entire fb range. Biological matter attached only locally on the aggregate surfaces when fb was low but spread more widely at higher fb. At intermediate to high fb values, biological matter also bridged two or more MPs and gradually covered the MP outer surface.

Fig 2. Samples of microbial-associated suspended MP aggregates acquired with OMCEC.

Fig 2

The fraction of attached biological ballast increases from left to right. Top row: raw images. Bottom row: segmented images with blue representing MPs and yellow representing biological matter. Note that the aggregate size varies among the aggregate images as shown in the scale bar in each image.

Effects of biological colonisation on MP aggregate size and shape

MP aggregate size

The size of virgin MP particles obtained from the MP-only sample ranged from 50 to 500 μm (grey line in Fig 3a), while we physically sieved MPs to the size of 90 to 300 μm prior to the experiments. We attribute these differences to the shape of the MP particles (e.g., elongated) that allowed MPs with size > 300 μm to pass through the square mesh, and the tiny dust that may stick on other particles during the sieving process. Interestingly, MP aggregates containing less than 10% biological ballast had size remarkably larger than virgin MP particles (i.e., double the minimum and maximum size).

Fig 3. MP aggregate size analyses.

Fig 3

(a) Probability distribution of size L for microbial-associated MP aggregates at different biological fraction fb and virgin MP particles in the MP-only sample. (b) Experimental bin-averaged size L of microbial-associated MP aggregates as a function of the attached biological fraction fb; error bars represent standard deviation in each bin.

The size distribution of MP aggregates shifted towards larger L with increasing biological fraction fb, except for aggregates with fb ≥ 0.9 (Fig 3a). This finding agrees with earlier literature showing larger aggregates due to the growth of living microorganisms and their secretion of extracellular polymeric substance [30, 48]. The broad span of the size distribution of the biologically-prevalent group (fb ≥ 0.9) is likely because it included aggregates with different characteristics such as pure biological aggregates over a wide L range as well as MP aggregates at high levels of biological colonisation. In contrast to our expectation that the size of MP aggregates correlates positively with biological fraction, the maximum L observed experimentally was found at fb ≃ 0.8 (Fig 3b). A possible explanation is that aggregates broke up at high fb due to weaker biological bridges between particles or negative effects of microbial activity such as grazing and decomposition [48, 49].

MP aggregate shape

The experimentally-retrieved shape factors of MP aggregates in this experiment had projected areas and perimeters largely departing from regular spheres (b = π/4, c = π, Fig 4). MP aggregates occupied less than half the area of the containing square, and the MP aggregates with 0.4 ≤ fb ≤ 0.8 occupied the least area (Fig 4a). In contrast, these MP aggregates had the longest outer perimeter (i.e, c > 4, Fig 4b). Therefore, microbial-associated MP aggregates have more irregular shapes than aggregates with one prevalent material.

Fig 4. MP aggregate shape analyses.

Fig 4

Experimental bin-averaged (a) area-based shape factor b, and (b) perimeter-based shape factor c of microbial-associated MP aggregates as a function of the attached biological fraction fb; error bars represent standard deviation in each bin. (c) and (d) scatter of the shape factors b and c of microbial-associated MP aggregates over aggregate size L for three ranges of fb from the main experiment. (e) and (f) scatter of the shape factors b and c of virgin MP particles over particle size L from the MP-only sample. bL and cL were the shape factors calculated as a function of L as in Eqs 12 and 13.

The aggregate shapes were not only affected by fb but also changed with L (Fig 4c and 4d). The larger the MP aggregates grew, the less area they filled (Fig 4c) and the more irregular surfaces they had (Fig 4d). The experimental shape factors b and c were expressed as linear functions of L as

bL=0.364[mm1]L+0.588, (12)
cL=2.649[mm1]L+2.448, (13)

where L is in mm. Virgin MP particles from the MP-only sample also had irregular shapes (Fig 4e and 4f), which were caused by the sawing production and replicated the MP particles found in natural waters that formed as a result of biological and chemical degradation as well as physical fragmentation [50].

Effects of biological colonisation on MP aggregate settling

Our experiment showed a 50% decrease in the settling velocity v of MP aggregates when fb increased from 0.05 to 0.8 (Fig 5a). The most susceptible size range to biological colonisation was for L ≥ 0.7 mm, where we found the highest rate of change in v per incremental change in fb. Although almost all changes were negative, that is, v decreased with increasing fb, the rate of change at medium to high fb was more apparent than that at low fb.

Fig 5. MP aggregate experimental settling velocity analyses.

Fig 5

(a) Bin-averaged experimental settling velocity v for aggregates at different size L as a function of biological fraction fb; error bars represent standard deviation in each bin. (b) Reynolds number Re over ranges of fb; colours of scattered points represent values of v and size of scattered points is linearly scaled with L ranging from 0 to 1.5 mm.

To understand the settling regime of MP aggregates, we calculated Re = ρvL/μ with the experimental L and settling velocity v, and with density ρ estimated using Eq 7. MP aggregates in our experiments had 10−3 < Re < 6.1 (Fig 5b), which reached the upper bound of the Stokes regime but were within the limit of validity for Eq 4. The experimental points in Fig 5b show that high Re corresponded to large L and high v, and vice versa. In addition, although fb was accounted for in the calculation of Re through ρ, its contribution was weak and we could not detect a trend between Re and fb (Fig 5b).

Modelling of the settling velocity of MP aggregates

The terminal velocity v* in Eq 5 was used with our experimental data (Fig 6a). The smallest aggregate in the experiment had Lp = 37.5 μm and fractal dimension assumed to be δ = 3; the experimental shape factors in Eq 4 were substituted by the L-dependent bL and cL values in Eqs 12 and 13. The MP density ρMP = 1.195 g cm−3 was obtained from the manufacturer data sheet of PUR pipe (RS. 483-5765), while the experimental density and viscosity of Hawkesbury river water were ρf = 1.007 g cm−3 and μ = 1.002 mPa⋅s at 20°C, respectively. The volume-based shape factor a, fractal scaling parameter γ, and biological density ρb were unknown and were therefore estimated against the experimental v (in brackets in Table 1) by inverse problem solution of Eq 5 using a nonlinear least-square fitting until the residuals between the observed and calculated velocities were the minimum [47]. Here, we discretized the L range into three groups by fb values to optimize the least-square fitting minimization.

Fig 6. Terminal velocity equation validation and aggregate fractal dimension estimation.

Fig 6

(a) Validation of the terminal velocity Eq 4 for microbial-associated MP aggregates; v is the experimental settling velocity while v* is the estimated settling velocity using Eq 5. (b) Estimated aggregate fractal dimension d over ranges of experimental aggregate size L, biological fraction fb, and settling velocity v, respectively.

Table 1. Parameters used for settling velocity in Eq 5.

Parameters in brackets were estimated from calibration, while the others were measured from experiments, assumed, and retrieved from the manufacture data sheet.

Parameters Units Values Definition
v* [mm s−1] 0.019 to 3.501 Modelled terminal velocity, Eqs 4,5,6
μ [mPa⋅s] 1.002 Water viscosity at 20°C
ρf [g cm−3] 1.007 Water density, measured for Hawkesbury River water
ρ [g cm−3] 1.048 to 1.195 Aggregate density, Eq 7
ρb [g cm−3] (1.048) Biological matter density, calibrated
ρMP [g cm−3] 1.195 Polyurethane (PUR) density, from manufacture data sheet
g [m s−2] 9.81 Gravitational acceleration
L [mm] 0.0375 to 1.471 Experimental aggregate size
A [mm2] 0.00073 to 0.227 Aggregate projected area, calculated from the shape factor bL and size L, Eq 8
P [mm] 0.091 to 9.336 Aggregate outer perimeter, calculated from the shape factor cL and size L, Eq 9
bL [-] 0.053 to 0.575 Estimated area-based shape factor from the experimental shape factor b against L, Eq 12
cL [-] 2.543 to 6.345 Estimated perimeter-based shape factor from the experimental shape factor c against L, Eq 13
p1b, p1c [mm−1] -0.364, 2.649 Linearly fitted parameters in Eq 12
p2b, p2c [-] 0.588, 2.448 Linearly fitted parameters in Eq 13
V [mm3] 4.2x10−6 to 0.076 Aggregate solid volume (excluded pores), Eq 10
a [-] (0.093) Volume-based shape factor, calibrated
d [-] 2.630 to 3 Aggregate fractal dimension, Eq 11
δ [-] 3 Fractal dimension of the smallest aggregate in the experiment, assumed
γ [-] (-0.0359) Fractal scaling parameter, calibrated
Lp [mm] 0.0375 Size of the smallest aggregate in the experiment, measured
α [-] 0, 1 Heaviside parameter in Eq 11 taking into account the compact structure of virgin MPs regardless of size L

The estimated settling velocity v* was shown to match the experimental v well (with correlation coefficient R = 0.96 and the normalized root-mean-square deviation NRMSD = 7%, Fig 6a). The estimated volume-based shape factor a = 0.093 suggested that the aggregates in average occupied less than 10% of the volume of a cube of the same size. The estimated fractal scaling parameter γ = −0.0359 has commonly been found for biological aggregates [40] and depicted a negative relationship between L and d. The biological density was estimated as ρb = 1.048 g cm−3, which was within the range of ρb of diatoms used in [5153] and estimated in [40].

Effects of biological colonisation on MP aggregate fractal dimension

Using the estimated fractal scaling parameter γ = −0.0359, we were able to calculate MP aggregate fractal dimension d as in Eq 11 and represent it against fb, v, and L (Fig 6b). MP aggregates had d ranging from 2.6 to 3 with minimum d at intermediate to high fb, suggesting that MPs colonised by biological matter in our experiments resulted in less compact aggregate architecture as compared to MP-prevalent (fb ≤ 0.1) and biologically-prevalent (fb ≥ 0.9) aggregates. d was positively correlated to L (see marker size in Fig 6b), but an apparent correlation between d and the experimental v was not observed (see marker colours in Fig 6b) although the parameter γ used to calculate d was estimated against v. It is possible to conclude that d may indirectly impact v through its effects on L and fb, and that the vertical transport of MP aggregates is non-linearly controlled by a combination of correlated parameters including size, shape, fractal dimension, and material fractions.

Modelled terminal velocity of low- and high-density MPs

Eq 4 was applied to model the terminal velocity (settling or rising) of seven different common polymers with two types of biological ballast (Fig 7) at different fb levels. The analysis was conducted using the average MP aggregate geometrical properties observed in our experiment for polyurethane with same values applied to all other polymers upon the assumption that microbial colonisation patterns on different polymers are similar. The low-density polymers included expanded polystyrene (EPS, ρMP = 0.011 g cm−3), polypropylene (PP, ρMP = 0.905 g cm−3), and high-density polyethylene (HDPE, ρMP = 0.965 g cm−3), and the high-density polymers included polystyrene (PS, ρMP = 1.050 g cm−3), polyurethane (PUR, ρMP = 1.195 g cm−3), and polyethylene terephthalate (PET) and polyvinyl chloride (PVC) with similar densities ρMP = 1.370 g cm−3. ρb = 1.048 g cm−3 in our experiment was used to represent the high-density ballast found in natural waters, and ρb = 0.900 g cm−3 was used to represent ballast mainly made of algae and cyanobacteria with very low density or entrapping gas bubbles [54].

Fig 7. Analyses of low- and high-density MPs associated with biological ballast.

Fig 7

Estimated terminal velocity v* of microbial-associated MP aggregates made of seven different polymers and two types of biological ballast against the biological fraction fb range. Low-density polymers include expanded polystyrene (EPS), polypropylene (PP), and high-density polyethylene (HDPE), and high-density polymers include polystyrene (PS), polyurethane (PUR), polyethylene terephthalate (PET), and polyvinyl chloride (PVC).

Microbial colonisation can cause MP aggregates to either retain their motion direction and change only their speed or switch the motion direction (Fig 7). PVC, PET, and PUR aggregates reduced by more than a half their settling velocities when attached to high-density ballast, while PP and HDPE aggregates almost doubled their rising velocities when attached to low-density ballast. On the other hand, the naturally settling MP aggregates (PS, PUR, PET and PVC) became neutral-buoyant and rising with 30 to 80% of low-density ballast, and the naturally rising MP aggregates (HDPE and PP) started to settle with 50% of high-density ballast. PS aggregates attached to high-density ballast with ρMPρb tended to sink faster due to the dominant effect of the increased size on the settling velocity. In contrast, EPS, a polymer with very low density, decreased its rising velocity when being colonised but almost never settled.

Discussion

Microbial-associated MP aggregates have been recognised and studied previously but this is the first work that investigates and quantifies the attached biological fraction and its effects on the geometrical properties and terminal velocity of MP aggregates. The attached biological fraction has a well defined linear impact on the MP aggregate density ρ (see Eq 7): for any MP density, the biological ballast can bring ρ close to the ambient fluid density ρf, or cause ρ to exceed or fall below ρf. However, the terminal velocity of suspended MP aggregates is controlled not only by their excess density but also by their architecture such as size, shape, and fractal dimension [40]. Our experiment and analyses showed that the correlation between fb and MP aggregates architecture was nonlinear, with MP aggregates containing about 60% to 80% of biological ballast having the largest size, the most irregular shape, and the lowest fractal dimension. These counter-balancing effects caused MP aggregates terminal velocity to be non-linearly affected by fb, where a higher rate of change in v per unit change in fb was observed at high fb values.

In natural waters, microbial-associated MP aggregates can be formed by many different mechanisms. Microorganisms can attach to MP surfaces by means of their motility and by turbulence, and grow colonies on MPs through metabolic growth and excretion of sticky byproducts [55, 56]. MPs can also incorporate into pre-formed biological aggregates or marine snow by the aid of turbulence vorticity as shown in [26, 29]. The formation of microbial-associated MP aggregates in our experiment was likely related to both mechanisms. From the aggregate images (in addition to those in Fig 2), we observed the spread of biological ballast on MP surface, which was possibly caused by cell colonisation, and we also observed MPs embedded in large biological aggregates, which was a sign of incorporation. Bio-fouling on MPs [28] and the degradation and fragmentation of pre-colonised macroplastics can also produce microbial-associated MP aggregates. Especially, MPs can be associated with biological ballast as a product of trophic transfer for example when MPs are ingested and then egested in faecal pellets by zooplankton [27].

In all previous experiments [2629, 55], attached biological ballast was shown to activate or increase the MP settling velocity leading to fast deposition to the bed. Our experiment shows evidence of a decreasing v of high-density MP aggregates following microbial colonisation, which is explained by biological ballast having density ρb = 1.048 g cm−3 (i.e., retrieved from the settling velocity equation calibration, Table 1) lower than the MP density ρMP = 1.195 g cm−3. This finding is important because, first, the microorganisms we cultured were sampled from a natural brackish river from the suburban Sydney area, and thus they represent the microbial composition mostly exposed to MP pollution in this large urban settlement; and, second, the tested polyurethane MPs belong to the most common high-density polymers. Given that the residence time tr of MP aggregates in the water column scales with v as tr ∝ 1/v (excluding other factors like turbulent and Stoke drifts), it is likely that MP presence within the water column of the sampled environment is increased by microbial ballast.

The proposed Eq 4 captured the experimental velocity of microbial-associated MP aggregates well. Eq 4 was developed in [39] for organic-associated sediment aggregates, and has been adapted here to account for virgin MPs and microbial-associated MP aggregates. Except for MPs with Re ≪ 1 that may still follow the Stokes regime [5, 57], the settling velocity of virgin MPs with Re > 1 (i.e., non-negligible inertia force) has previously been estimated using empirical definitions of drag coefficients Cd and various particle sizes and shapes. For example, [58, 59] employed the equation in [37] for regular and irregular virgin MPs of different polymers, while [60] suggested the use of the equation in [61] for spherical and round-like MPs of various polymers. However, MPs associated with biological matter are characterized by fractal structure as shown in [26] and in this work, and thus have remarkably different size, shape, and terminal velocity as compared to virgin MP particles. In addition, Eq 4 can account for changes in the direction of motion, that is from settling to rising and vice versa, as disscused below.

By means of the OMCEC system and the terminal velocity Eq 4, we quantitatively showed that the association of biological ballast can induce a switch in the direction of MP terminal velocity, and this may explain the presence of low-density MPs (e.g., polyethylene-propylene, PE, PP) at the ocean bed [6265] and high-density MPs (e.g., PS, PVC, PET) at the water surface [66], as well as the massive loss of MPs from the water surface [67]. After switching the motion direction and before reaching the ocean bed or surface, MP aggregates sink or rise at a lower speed as compared to other virgin MPs moving in the same direction. Even if MPs retain their motion direction, their terminal velocity can also be substantially reduced due to biological ballast association. Consequently, the residence time of both high- and low-density MPs at different microbial colonisation levels would be lengthened and MP presence would stretch along the water column for longer period. Aquatic organisms at different depth of the water column, therefore, may have more time and chance to encounter MPs.

This research was conducted with the acknowledgment of some technical limitations and assumptions. The first limitation was the aggregate size limit that can be detected by OMCEC optics. Although the resolution was 2.75 μm per pixel, the smallest aggregate size we reported was 37.5 μm to minimize the errors due to noise and light reflection. Large aggregates exceeding our field of view or sinking faster than our camera speed were also not captured. The second limitation was the two-dimensional image acquisition with an assumption of similarities of aggregate properties on every projection. However, given the large number of samples and the stochastic nature of aggregate structure, results were considered to be statistically reliable and repeatable by other imaging systems such as In Situ Settling Velocity (INSSEV) and Laser In-Situ Scattering and Transmissometery (LISST) [6870] or laboratory-based systems [7173]. Thirdly, natural water column consists of a wide variety of suspended materials, especially minerals, and thus MP aggregates are more likely to contain as well minerals, detritus, and faecal pellets that can significantly affect their vertical transport through changes in density, size, and fractal dimension. Fourthly, the use of only polyurethane MPs to represent other MPs originated from different polymers is only a proximity estimation because polymers have distinct physical and chemical properties. MPs of different polymers may be generated with different sizes and shapes even under similar manufacturing methods. The differences in their polymer formulation, bonds, chemical groups, and added additives can favour the microbial activities differently, and thus the microbial colonization quantities and patterns on different polymers are very likely to be different. For example, PUR containing nitrogen and having flexible bonds is a favourable substrate for biodegradation [74, 75]. Moreover, microorganisms with diverse metabolisms and colonization preferences [54] are very likely to produce different colonization patterns on MPs. MP aggregates formed under various environmental conditions (e.g., shear rates, nutrient and particle concentrations) with different cell colonization patterns may variegate in geometrical properties and velocities, as suggested by studies of microbial-associated mineral aggregates [30, 32, 40]. Therefore, more experiments on specific polymers and microorganisms, as well as their complex interactions in natural environments, are needed to provide a better understanding of MP transport in natural waters.

Supporting information

S1 Fig. Example microscope images.

(a) Microorganisms sampled at Hawkesbury River, NSW, Australia after 2 weeks of pre-incubation, and (b) an aggregate of blue polyurethane microplastics and microorganisms from (a). Images were acquired using a Motic® series BA310 microscope at 10X magnification.

(TIF)

S2 Fig. Settling column.

(1a) flocculation section, (1b) diaphragm, (1c) measuring section, (2) oscillating grid, (3) DC motor that drives the grid, (4) water quality meter, (5) Cree LED, (6) optical fibres, (7) camera and magnification lens and (8) microcontrolling system. (5), (6), and (7) together make the OMCEC optical system. Figure was credit from [30].

(TIF)

S1 Table. Experimental size, biological fraction, and settling velocity of MP aggregates.

(XLSX)

Acknowledgments

We thank Peter Scanes, Jaimie Potts, and Angus Ferguson, New South Wales Office of Environment and Heritage (NSW-OEH), for providing assistance in collecting samples in the Hawkesbury river.

Data Availability

All relevant data are within the manuscript and its Supporting Information files.

Funding Statement

THN: Australia Awards Scholarship. Funder: Australia Department of Foreign Affair and Trade. (https://dfat.gov.au). F.M and F.H.M.T: SREI2020 Envirosphere, The University of Sydney. (https://sydney.edu.au/). F.M – SOAR, The University of Sydney (https://sydney.edu.au/). Did the sponsors or funders play any role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript? NO.

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Sinking of microbial-associated microplastics in natural waters

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1. Our internal editors have looked over your manuscript and determined that it may be within the scope of our Plastics in the Environment Call for Papers. The Collection will encompass a diverse range of research articles to better understand various aspects of the effect of plastics in the environment. Additional information can be found on our announcement page: https://collections.plos.org/s/plastics-environment. If you would like your manuscript to be considered for this collection, please let us know in your cover letter and we will ensure that your paper is treated as if you were responding to this call. If you would prefer to remove your manuscript from collection consideration, please specify this in the cover letter.

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3. In your Methods section, please provide additional information regarding the permits you obtained for the work. Please ensure you have included the full name of the authority that approved the field site access and, if no permits were required, a brief statement explaining why.

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Reviewer #1: Partly

Reviewer #2: Yes

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Reviewer #1: Yes

Reviewer #2: Yes

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Reviewer #1: Yes

Reviewer #2: Yes

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Reviewer #1: Yes

Reviewer #2: Yes

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5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The manuscript deals with an original and intelligent approach to predict the behavior of different microplastic particles associated with different degrees of biological colonization in natural water. The experimental database is very well explained and carefully evaluated. I have to admit that I did not check the equations, but their construction has been explained clearly and understandable for non-specialists. It should be stated more clearly in the text where the conclusions are based on the authors’ own experiments as opposed to theoretical simulation. In the latter case, some assumptions need critical evaluation (see below). To my opinion there is already some discussion of findings in the results section, which should be commented by the handling editor.

Abstract:

line 3 should probably read „excess buoyancy relative to water“

“MPs” in plural form is sometimes incorrect, think of using “MP” throughout

Last phrase: statement should be expressed more cautiously, as the application is purely theoretical and has limitations (see later)

Lines 2-3: statement is misleading, the references point to input from rivers, which integrate many pathways of plastic input, among which household sewage systems do not dominate

Lines 17-18: plastic does not feed higher trophic levels (not even the level where it enters the food chain) – better: it can be transferred to higher trophic levels

Line 84: “cycle” instead of “cycles” – please also give details on the vessel shape and size, the light intensity and incubator type

Line 228: up to 9.x % biological ballast is not “without biological matter”, this only fits for the virgin plastic particles – please adjust statement

Line 309: it should be said more clearly that this part of the study is mostly based on literature data, not on experimentation.

Line 336: I do not understand how this number is derived from Eriksen et al.’s study, since they reported particle counts and weights on a square kilometer basis. Moreover, the comparison is critical, as Eriksen et al. recorded particles larger than 300 µm, and the study under review used PUR sawdust sized 90-300 µm. Please explain more clearly.

Lines 380-381: please say more clearly that only PUR has been experimentally tested. It may differ in colonization from other polymers due to several factors, one of which is the fact that it is the only polymer containing nitrogen (see e.g. study by Russell et al. 2011, https://aem.asm.org/content/77/17/6076)

Line 411: please check carefully if the given weight is correct. Reference 69 includes plastic of different size classes, and reference 70 reports plastic particles larger than 1 cm throughout. Moreover, even if the particles sink faster, this does not necessarily mean that fish do not catch them, they might be attracted by their motion.

Line 415 and thereafter: regarding the limitations of the study, it should also be considered that the shape characteristics of the other polymers might be different even after using the same sawing procedure due to their physical properties. This also applies to their wettability, which may greatly influence colonization and transport.

Line 428: faecal or fecal pellets

Reviewer #2: The manuscript „Sinking of microbial-associated microplastics in natural waters” by Nguyen et al. is original, interesting, timely, and an important contribution to the current knowledge of marine plastic research. The experimental design is elegant and the results provide new insight into the movement behavior of microplastic within the water column. The combination of lab experiments and model approaches expand the knowledge about the movement of different plastic types in the water column in relation to biofouling. The only criticism I have is the way the results are presented. The authors presume that the readers are experts in the research field of the authors. Important explanatory details about the methods are missing. This makes the ms very difficult to read and to understand. The authors used a lot of different parameters, some of them not properly explained, which can easily confuse the reader. I recommend to add more explanation and rewrite some parts of the ms in a simpler way. The paper will gain more visibility when it is easy to understand. I hope my comments below can help to focus on parts that have room for improvements.

Major comments:

You present a lot of calculations in your ms with plenty of parameters. Most of the parameters are explained somewhere in the text. However, it is easier to follow the text with having an overview of all parameters. Can you expand Table 1 and include all parameters you used in your equations? Explain in an additional column in the same table the meaning of the parameters. Something like:

Parameter | Units | Values | definition | equation

A | µm | 10-200 | projected area = sum of image pixels of an aggregate | 1, 2, 3,…

Line 66-67: Please explain in more details in the ms what do you mean with “shape irregularity and fractal structure”.

Line 75: You used a plankton net with 20µm mesh size and you said that you sampled bacteria (line81). Most bacteria range between 0.2 and 2µm. Do you wanted to exclude most of the bacteria? Why you didn’t use unfiltered water for your pre-incubation to obtain the entire biota? And why do you pre-incubated the water before you bring it in the OMCEC system? Please explain in the ms.

Line 85: You added nitrate and glucose to your experiment, why? Do you want to trigger a phytoplankton bloom? Please explain in the ms.

In general, can you give more details in your ms why you manipulated the plankton community before you used them in the OMCEC system? Is your community still a natural community or is there a selection for certain species?

Line 110: You kept your microbial community in the flocculation section for 7 days. Did you observe the community within this time? Did you ventilated the system or did it become anoxic? Are the natural conditions of the community unaffected by this procedure so that you can compare the aggregation processes in your system with natural aggregation processes? Can you please discuss this in the ms.

Line132-135: This sentence is difficult to understand. Can you write something like this: The threshold line defined overlapping pixels as biological or MP pixels by dividing equally all pixels outside of the 99% confidence limits (Fig. 1).

Line 135: Please define t and p in the equation.

Line 145: Do you mean with terminal velocity modeled/calculated velocity?

Line190: explain with other words a and d, what is a volume-based shape factor of the fractal aggregate and volume fractal dimension?

Line194: What is a fractal dimension and a fractal scaling parameter?

Line 193-201: This section is very difficult to understand. Can you explain in more detail and write it in a simpler way?

Line339-340: Can you rewrite the sentence? It is not understandable.

Is there a reason why do you used brackish water in your experiments instead of marine water with PSU around 35? Did you perform the experiment also with fresh water? Do you will gain different results in sinking behavior dependent on the different biota/aggregate formation in the different water regimes that you cannot calculate in your model? The density of the water is easy to adjust in your model but the salinity can have different impact on biota behavior, formation of particles, stickiness and so on. Can you discuss it in your discussion part?

Did you also test in your OMCEC system the sinking behavior of different types of plastic directly? Are these results comparable with your modeled results?

Minor comments:

The resolution of the figures is very blurry. Can you improve the resolution for the final publication?

Figure 7b: in the legend please change HPDE into HDPE.

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Reviewer #1: Yes: Katrin Wendt-Potthoff

Reviewer #2: Yes: Cathleen Schlundt

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PLoS One. 2020 Feb 3;15(2):e0228209. doi: 10.1371/journal.pone.0228209.r002

Author response to Decision Letter 0


12 Dec 2019

Review comments and response to Journal Requirements

Comment 1. Our internal editors have looked over your manuscript and determined that it may be within the scope of our Plastics in the Environment Call for Papers. The Collection will encompass a diverse range of research articles to better understand various aspects of the effect of plastics in the environment. Additional information can be found on our announcement page: https://collections.plos.org/s/plastics‐environment. If you would like your manuscript to be considered for this collection, please let us know in your cover letter and we will ensure that your paper is treated as if you were responding to this call. If you would prefer to remove your manuscript from collection consideration, please specify this in the cover letter.

Thank you for your consideration, and we would like to include our paper in this special collection.

Comment 2. In your Methods section, please provide additional location information, including geographic coordinates for the data set if available.

Changed accordingly. We added the coordinate of the sampling site (Section Material preparation, line 77).

Comment 3. In your Methods section, please provide additional information regarding the permits you obtained for the work. Please ensure you have included the full name of the authority that approved the field site access and, if no permits were required, a brief statement explaining why.

Our sampling has not required a permit because we only collected plankton in river water in a public area and we confirm that the field study did not involve endangered or protected species. We added this ethics statement in the lines 236-239.

Review comments and response to Reviewer #1

Comment 1. The manuscript deals with an original and intelligent approach to predict the behavior of different microplastic particles associated with different degrees of biological colonization in natural water. The experimental database is very well explained and carefully evaluated. I have to admit that I did not check the equations, but their construction has been explained clearly and understandable for non‐specialists. It should be stated more clearly in

the text where the conclusions are based on the authors’ own experiments as opposed to theoretical simulation. In the latter case, some assumptions need critical evaluation (see below). To my opinion there is already some discussion of findings in the results section, which should be commented by the handling editor.

We thank the Reviewer for reviewing our paper and her positive opinion. We have considered her suggestions and made some corresponding changes to the manuscript. We address her attention to the point-by-point responses given below.

Comment 2. Abstract: line 3 should probably read “excess buoyancy relative to water”.

Changed accordingly (Abstract line 3).

Comment 3. “MPs” in plural form is sometimes incorrect, think of using “MP” throughout.

We now use “MPs” for nouns and “MP” for adjectives throughout the manuscript (changes were not marked in red in the “Revised Article with Changes Highlighted” file).

Comment 4. Last phrase: statement should be expressed more cautiously, as the application is purely theoretical and has limitations (see later).

We agree with the Reviewer, and we have made modification to emphasize that the model is a preliminary tool to estimate the vertical transport of MP aggregates (Abstract lines 14-15).

Comment 5. Lines 2‐3: statement is misleading, the references point to input from rivers, which integrate many pathways of plastic input, among which household sewage systems do not dominate.

Changed accordingly (lines 2-5). We rephrased that plastic production is for household, retail, and industry demands, and the main reason for plastics reaching the oceans is from the mismanaged plastic waste in general.

Comment 6. Lines 17‐18: plastic does not feed higher trophic levels (not even the level where it enters the food chain) – better: it can be transferred to higher trophic levels.

Changed accordingly (lines 18-19).

Comment 7. Line 84: “cycle” instead of “cycles” – please also give details on the vessel shape and size, the light intensity and incubator type.

Changed accordingly (lines 85-92). Each of the pre-incubated samples (500ml) was contained in a 600 mL glass beaker and was agitated on the orbital shaker EOM5 at 100 rpm, at 20⁰C, under a 9:15 light:dark cycle with light being generated by a 13 W bulb in the laboratory for two weeks.

Comment 8. Line 228: up to 9.x % biological ballast is not “without biological matter”, this only fits for the virgin plastic particles –please adjust statement.

We agreed with the Reviewer and removed this comment (lines 260-261).

Comment 9. Line 309: it should be said more clearly that this part of the study is mostly based on literature data, not on experimentation.

We changed the section title to “Modelled terminal velocity of low- and high-density MPs” and changed the word “estimate” to “model” and refer the readers to the equation used. We also emphasized that we applied the geometrical properties of polyurethane MP aggregates to all other polymers (lines 341-346).

Comment 10. Line 336: I do not understand how this number is derived from Eriksen et al.’s study, since they reported particle counts and weights on a square kilometer basis. Moreover, the comparison is critical, as Eriksen et al. recorded particles larger than 300 μm, and the study under review used PUR sawdust sized 90‐300 μm. Please explain more clearly.

We appreciated the Reviewer’s comment. The average MP concentration in the ocean 0.003 g m-3 we used was actually taken from Lebreton et al. (2017)’s paper, where they cited Eriksen et al. (2014) as the reference source for that number. They derived the volume concentration (g m-3) by dividing the concentration per surface area (g km-2) to the water depth that the trawling devices reached. We should have cited Lebreton et al. (2017) as well in the manuscript for using that number. We agreed with the Reviewer #1’s comment about the MP size larger than 300 μm in the source and the size smaller than 300 μm in our analysis. Together with the concern of the Reviewer #2 regarding this section, we removed the section “mass flux of low- and high-density MPs” from our manuscript to avoid any confusion to readers (lines 367-376).

Eriksen, M., Lebreton, L. C., Carson, H. S., Thiel, M., Moore, C. J., Borerro, J. C., ... & Reisser, J. (2014). Plastic pollution in the world's oceans: more than 5 trillion plastic pieces weighing over 250,000 tons afloat at sea. PloS one, 9(12), e111913.

Lebreton, L. C., Van der Zwet, J., Damsteeg, J. W., Slat, B., Andrady, A., & Reisser, J. (2017). River plastic emissions to the world’s oceans. Nature communications, 8, 15611.

Comment 11. Lines 380‐381: please say more clearly that only PUR has been experimentally tested. It may differ in colonization from other polymers due to several factors, one of which is the fact that it is the only polymer containing nitrogen (see e.g. study by Russell et al. 2011, https://aem.asm.org/content/77/17/6076)

We added the polymer type (polyurethane) to the context to clarify our MP type (line 415) and discuss the difference in the colonization of different polymers in the discussion section (lines 465-473).

Comment 12. Line 411: please check carefully if the given weight is correct. Reference 69 includes plastic of different size classes, and reference 70 reports plastic particles larger than 1 cm throughout. Moreover, even if the particles sink faster, this does not necessarily mean that fish do not catch them, they might be attracted by their motion.

We appreciated the Reviewer’s comment. We did not take into account the size of MPs while giving to this space in discussion. We adjusted our argument to “Aquatic organisms at different depth of the water column, therefore, may have more time and chance to encounter MPs” and remove these references (line 444-450).

Comment 13. Line 415 and thereafter: regarding the limitations of the study, it should also be considered that the shape characteristics of the other polymers might be different even after using the same sawing procedure due to their physical properties. This also applies to their wettability, which may greatly influence colonization and transport.

We added in our discussion the limitations due to using one type of polymer to represent many different polymers. MPs with different polymers can be various in size, shape, and cell colonization (lines 465-475).

Comment 14. Line 428: faecal or fecal pellets

Changed accordingly (line 464).

Review comments and response to Reviewer #2

Comment 1. The manuscript „Sinking of microbial‐associated microplastics in natural waters” by Nguyen et al. is original, interesting, timely, and an important contribution to the current knowledge of marine plastic research. The experimental design is elegant and the results provide new insight into the movement behavior of microplastic within the water column. The combination of lab experiments and model approaches expand the knowledge about the movement of different plastic types in the water column in relation to biofouling. The only criticism I have is the way the results are presented. The authors presume that the readers are experts in the research field of the authors. Important explanatory details about the methods are missing. This makes the ms very difficult to read and to understand. The authors used a lot of different parameters, some of them not properly explained, which can easily confuse the reader. I recommend to add more explanation and rewrite some parts of the ms in a simpler way. The paper will gain more visibility when it is easy to understand. I hope my comments below can help to focus on parts that have room for improvements.

We thank the Reviewer for reviewing our paper and her positive opinion. We have revised the manuscript by adding more explanations and restructuring the section describing the terminal velocity equation. We think our methods section has improved substantially and has become easier to follow than before. We address her attention to the point-by-point responses given below.

Comment 2. You present a lot of calculations in your ms with plenty of parameters. Most of the parameters are explained somewhere in the text. However, it is easier to follow the text with having an overview of all parameters. Can you expand Table 1 and include all parameters you used in your equations? Explain in an additional column in the same table the meaning of the parameters. Something like:

Parameter | Units | Values | definition | equation

A | μm | 10‐200 | projected area = sum of image pixels of an aggregate | 1, 2, 3,…

Thanks, we have now listed all parameters used in the equation and explained their values, sources, and definitions in Table 1.

Comment 3. Line 66‐67: Please explain in more details in the ms what do you mean with “shape irregularity and fractal structure”.

We took into account shape irregularity as the difference in shapes of MPs and MP aggregates using shape factors bL and cL to calculate the area A and perimeter P from size L in the equations. The fractal structure of the aggregates was expressed through the fractal dimension d that follows the fractal scaling against the size L. We have included a more detailed explanation in lines 206 to 215.

Comment 4. Line 75: You used a plankton net with 20μm mesh size and you said that you sampled bacteria (line81). Most bacteria range between 0.2 and 2μm. Do you wanted to exclude most of the bacteria? Why you didn’t use unfiltered water for your pre‐incubation to obtain the entire biota? And why do you pre‐incubated the water before you bring it in the OMCEC system? Please explain in the ms.

The reason we filtered the river water was to exclude fine mineral in the sample. The presence of minerals can affect the size, density, and settling velocity of the observed aggregates in this study, where we focused only on MPs and biological matter. Similarly, we pre-incubated the biological samples to minimize the interference of minerals in our experiment. Mineral particles may exist in our biological samples because they may attach to the biological aggregates larger than 20 μm. Because mineral size is similar to bacteria, it is challenging to exclude it from the biological samples. Hence, we diluted the biological samples at a dilution factor of 5 and we pre-incubate the samples to increase the microbial population that we have (very little at the beginning) to be enough for the main experiment in the settling column (8 L). Through pre-incubation and dilution, we can therefore eliminate fine minerals from our samples. We added this explanation to our methods section in lines 78-80, and 84-87.

Comment 5. Line 85: You added nitrate and glucose to your experiment, why? Do you want to trigger a phytoplankton bloom? Please explain in the ms. In general, can you give more details in your ms why you manipulated the plankton community before you used them in the OMCEC system? Is your community still a natural community or is there a selection for certain species?

As mention above, the reason we pre-incubated the biological sample is to eliminate fine minerals and increase the microbial population for the experiment in a larger volume. The addition of nutrients was to support microbial growth and shorten the experiment period. We were aware that adding nitrate and glucose might have selected some of the species as compared to the natural community. We added a note to this aspect in lines 92-93.

Comment 6. Line 110: You kept your microbial community in the flocculation section for 7 days. Did you observe the community within this time? Did you ventilated the system or did it become anoxic? Are the natural conditions of the community unaffected by this procedure so that you can compare the aggregation processes in your system with natural aggregation processes? Can you please discuss this in the ms.

The flocculation section of the settling column where the incubation occurred is ventilated because the settling column was loosely capped, and an 8 L of head space was available to allow sufficient gas exchange between atmosphere and the water column. In addition, the suspension was sheared for 30 minutes every 2 hours to aerate the suspension (lines 122-125). We did not perform quantitative measurements of the microbial community.

The settling column was designed to replicate as much as possible the hydrodynamic conditions of natural aqueous environments like turbulence shear rates, the use of river water (with nutrient addition), and lighting system. However, the experiment is still laboratory-based, and thus the aggregation processes may be different from the natural aggregation processes. On the one hand, we agree that this is a disadvantage of the experiment but, on the other hand, this allows replication of experiments at controlled conditions for comparison with other experiments of MP associating with biological matter in the literature (Long et al., 2015 and Porter et al., 2018) that are also laboratory based. We added a small discussion of the use of the settling column to minimize the disturbance to the flocculation processes in lines 118-120.

Long, M., Moriceau, B., Gallinari, M., Lambert, C., Huvet, A., Raffray, J., & Soudant, P. (2015). Interactions between microplastics and phytoplankton aggregates: Impact on their respective fates. Marine Chemistry, 175, 39-46.

Porter, A., Lyons, B. P., Galloway, T. S., & Lewis, C. (2018). Role of marine snows in microplastic fate and bioavailability. Environmental science & technology, 52(12), 7111-7119.

Comment 7. Line132‐135: This sentence is difficult to understand. Can you write something like this: The threshold line defined overlapping pixels as biological or MP pixels by dividing equally all pixels outside of the 99% confidence limits (Fig. 1).

We rephrased this sentence in line 149-152. We did not use the suggested sentence because the threshold line did not equally divide the overlapping pixels, instead, it is the bisector of the two 99% confidence limits.

Comment 8. Line 135: Please define t and p in the equation.

Gt + Bt is the threshold value calculated using the threshold equation and is compared with Gp + Bp, which is the green and red intensities of a pixel, to determine the material of that pixel. The use of Gt + Bt may be confusing, and thus we have changed it to I instead of Gt + Bt (lines 151-153).

Comment 9. Line 145: Do you mean with terminal velocity modeled/calculated velocity?

Terminal velocity is the velocity of an object when all the forces applied on it reach a balance ΣF = 0. Terminal velocity can be settling velocity (downward) and rising velocity (upward). We used the term “settling velocity” in the experiment because we know the direction of the velocity is downward, while the term “terminal velocity” was used in the model for a general situation because MPs can either settle, rise, or float. We rephrased the section title and the first sentence of the section to clarify the definition of terminal velocity (line 163-165).

Comment 10. Line190: explain with other words a and d, what is a volume‐based shape factor of the fractal aggregate and volume fractal dimension?

We simplified “a” as volume-based shape factor of the aggregate, and “d” as fractal dimension of the aggregate. We used the set of shape factors, including “a” – volume-based, “b” – area-based, and “c” – perimeter-based to show how different the aggregate external shape as compared to a cube and a square. The fractal dimension d, on the other hand, represents the aggregate internal structure and compactness. The implementations are in line 213-215 and 217-219.

Comment 11. Line194: What is a fractal dimension and a fractal scaling parameter?

Fractal dimension d is a parameter ranging from 1 to 3, representing the internal structure of the aggregate with a higher value of d representing a more compact structure (Maggi and Winterwerp, 2004). The fractal dimension can be scaled with aggregate size L using the scaling law suggested in Maggi (2007), where γ is the fractal scaling parameter that shows the rate of change in d over the aggregate dimensionless size L/Lp. We added these explanations in lines 213-215, 218-219, and 222-223.

Maggi, F., & Winterwerp, J. C. (2004). Method for computing the three-dimensional capacity dimension from two-dimensional projections of fractal aggregates. Physical Review E, 69(1), 011405.

Maggi, F. (2007). Variable fractal dimension: A major control for floc structure and flocculation kinematics of suspended cohesive sediment. Journal of Geophysical Research: Oceans, 112(C7).

Comment 12. Line 193‐201: This section is very difficult to understand. Can you explain in more detail and write it in a simpler way?

We rephrased these sentences in line 223-225. The application of the Heaviside function is to avoid the fractal dimension of virgin MP particles to change with their size, because virgin MP particles are compact and should have d = 3.

Comment 13. Line339‐340: Can you rewrite the sentence? It is not understandable.

This section was deleted as it was concerned by both Reviewers (367-376).

Comment 14. Is there a reason why do you used brackish water in your experiments instead of marine water with PSU around 35? Did you perform the experiment also with fresh water? Do you will gain different results in sinking behavior dependent on the different biota/aggregate formation in the different water regimes that you cannot calculate in your model? The density of the water is easy to adjust in your model but the salinity can have different impact on biota behavior, formation of particles, stickiness and so on. Can you discuss it in your discussion part?

The sampling location followed from the sampling campaign organized by the New South Wales Office of Environment and Heritage. We had similar experiments with freshwater before but for microbial-associated mineral aggregates, not microplastics (Nguyen et al., 2017; Tang and Maggi, 2016). Our previous results with microbial-associated mineral aggregates showed that different types of microorganisms (e.g., with and without secreting exopolymer products) at different nutrient concentrations, shear rates, mineral concentrations would form aggregates with different size, fractal dimension, and settling velocity. We added this point in the discussion (lines 473-481) and suggested more experiments on different types of microorganisms at various environmental conditions to give a better understanding of this complex mechanism.

Nguyen, T. H., Tang, F. H., & Maggi, F. (2017). Optical measurement of cell colonization patterns on individual suspended sediment aggregates. Journal of Geophysical Research: Earth Surface, 122(10), 1794-1807.

Tang, F. H., & Maggi, F. (2016). A mesocosm experiment of suspended particulate matter dynamics in nutrient-and biomass-affected waters. Water research, 89, 76-86.

Comment 15. Did you also test in your OMCEC system the sinking behavior of different types of plastic directly? Are these results comparable with your modeled results?

We did not test different types of polymers with our OMCEC system, but we expected some differences between them because MPs of different polymers will have different sizes, shapes, formulas, linkages, and additives, even with the same generation methods. Therefore, our equation is suggested to be only a preliminary tool and should be validated with more experimental data for different types of polymers and microorganisms. This point was added in the last sentence of the Abstract and in the discussion section (lines 465-473).

Comment 16. The resolution of the figures is very blurry. Can you improve the resolution for the final publication?

The low resolution is due to the journal compiling process. We submitted high-resolution figures for the revision.

Comment 17. Figure 7b: in the legend please change HPDE into HDPE.

The figure was removed together with the section “Mass flux of low- and high-density MPs.”

Attachment

Submitted filename: Nguyen_etal_2019_Response_to_Reviewers.DOCX

Decision Letter 1

Matthäus Bäbler

10 Jan 2020

Sinking of microbial-associated microplastics in natural waters

PONE-D-19-30091R1

Dear Dr. Nguyen,

We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements.

Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication.

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Academic Editor

PLOS ONE

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Reviewers' comments:

Acceptance letter

Matthäus Bäbler

15 Jan 2020

PONE-D-19-30091R1

Sinking of microbial-associated microplastics in natural waters

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Fig. Example microscope images.

    (a) Microorganisms sampled at Hawkesbury River, NSW, Australia after 2 weeks of pre-incubation, and (b) an aggregate of blue polyurethane microplastics and microorganisms from (a). Images were acquired using a Motic® series BA310 microscope at 10X magnification.

    (TIF)

    S2 Fig. Settling column.

    (1a) flocculation section, (1b) diaphragm, (1c) measuring section, (2) oscillating grid, (3) DC motor that drives the grid, (4) water quality meter, (5) Cree LED, (6) optical fibres, (7) camera and magnification lens and (8) microcontrolling system. (5), (6), and (7) together make the OMCEC optical system. Figure was credit from [30].

    (TIF)

    S1 Table. Experimental size, biological fraction, and settling velocity of MP aggregates.

    (XLSX)

    Attachment

    Submitted filename: Nguyen_etal_2019_Response_to_Reviewers.DOCX

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting Information files.


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