Table A1.
Effective number of codons in the proteomes of the virus species analyzed
| Virus name | ENC‐observed | ENC‐expected | obs/exp |
|---|---|---|---|
| Hepatitis A Virus (HAV) | 46.9 | 52.3 | 0.897 |
| Hepatitis C Virus (HCV) | 54.0 | 55.0 | 0.982 |
| Hepatitis E Virus (HEV) | 51.9 | 55.3 | 0.937 |
| Simian Hepatitis A virus | 46.7 | 52.0 | 0.899 |
| Rodent hepatovirus (vole) | 43.1 | 47.8 | 0.901 |
| Bat hepatovirus (insectivore) | 49.3 | 54.8 | 0.900 |
| Human Rhinovirus C | 56.1 | 60.0 | 0.935 |
| Human Cosavirus B1 | 55.4 | 60.1 | 0.921 |
| Human Coronavirus | 47.0 | 51.6 | 0.911 |
| Human pegivirus A | 54.5 | 56.2 | 0.969 |
| West Nile virus | 57.0 | 62.3 | 0.915 |
| Zika virus | 56.6 | 62.2 | 0.910 |
| Norwalk virus (norovirus) | 58.3 | 62.3 | 0.937 |
| Triatoma virus | 45.0 | 48.0 | 0.937 |
| Cricket paralysis virus | 52.6 | 57.4 | 0.917 |
| Israeli acute paralysis virus | 51.5 | 55.1 | 0.934 |
| Varroa destructor virus | 50.6 | 52.0 | 0.972 |
All values were calculated with DAMBE (Xia, 2013)