Table 2. Species information and genome features of the chloroplast genomes of five Dicliptera species.
Species | D. acuminata | D. peruviana | D. montana | D. ruiziana | D. mucronata |
---|---|---|---|---|---|
Location | 9.05°S, 77.81°W | 11.41°S, 77.23°W | 11.79°S, 77.05°W | 15.87°S, 74.15°W | 12.21°S, 76.82°W |
Geographic region | Caraz, Paron, Peru | Lomas de lguanil, Huaral province, Peru | Lomas de Carabayllo, Lima province, Peru | Lomas de Cháparra, Caravelí province, Peru | Santuario del Amancay, Lima Province, Peru |
Voucher specimens No. | P10-091 | P170099 | P170177 | P170209 | P170492 |
Assemblied reads | 3745800 | 2103300 | 2272793 | 2108293 | 1927500 |
Mean coverage | 3727.5 | 2092.0 | 2262.4 | 2097.8 | 1918.3 |
Size (bp) | 150738 | 150811 | 150689 | 150750 | 150720 |
LSC length (bp) | 82844 | 82919 | 82796 | 82843 | 82834 |
SSC length (bp) | 17092 | 17090 | 17091 | 17091 | 17084 |
IR length (bp) | 25401 | 25401 | 25401 | 25408 | 25401 |
CDSs total length | 78714 | 78714 | 78714 | 78747 | 78717 |
Number of total genes | 114 | 114 | 114 | 114 | 114 |
Number of Protein-coding genes | 80 | 80 | 80 | 80 | 80 |
Number of tRNA genes | 30 | 30 | 30 | 30 | 30 |
Number of rRNA genes | 4 | 4 | 4 | 4 | 4 |
Overall GC content (%) | 38.0% | 38.0% | 38.0% | 38.0% | 38.0% |
GC content in LSC (%) | 36.0% | 36.0% | 36.0% | 36.0% | 36.0% |
GC content in SSC (%) | 31.9% | 31.7% | 31.9% | 31.9% | 31.6% |
GC content in IR (%) | 43.3% | 43.4% | 43.3% | 43.3% | 43.4% |
Genbank accession number | MK830556 | MK833945 | MK833946 | MK833947 | MK848596 |