Table 4. Coordinates, length, and GC content (in %) of the centromeres predicted in M. dermatis, M. nana, M. vespertilionis, and M. japonica.
Chr./scaffold | CEN | Core centromere | % GC genome |
||||
---|---|---|---|---|---|---|---|
Start | End | Length (bp) | % GC | ||||
M. dermatis
JCM11348 |
BCKX01000001.1 (Scf1) | CEN1 | 711,456 | 711,978 | 523 | 22.8 | 59.05 |
BCKX01000002.1 (Scf2) | CEN2 | 1,014,281 | 1,014,977 | 697 | 31.7 | ||
BCKX01000003.1 (Scf3) | CEN3 | 232,065 | 232,795 | 731 | 29.3 | ||
BCKX01000004.1 (Scf4) | CEN4 | 409,839 | 410,631 | 793 | 29.5 | ||
BCKX01000005.1 (Scf5) | CEN5 | 94,520 | 95,018 | 499 | 18.2 | ||
BCKX01000006.1 (Scf6) | CEN6 | 473,487 | 474,334 | 848 | 30.4 | ||
BCKX01000007.1 (Scf7) | CEN7 | 76,361 | 76,975 | 615 | 26 | ||
BCKX01000008.1 (Scf8) | CEN8 | 17,893 | 18,540 | 648 | 26.4 | ||
M. nana
JCM12085 |
BCLA01000001.1 (Scf1) | CEN1 | 715,036 | 715,592 | 557 | 27.8 | 57.95 |
BCLA01000002.1 (Scf2) | CEN2 | 349,428 | 350,120 | 693 | 33 | ||
BCLA01000003.1 (Scf3) | CEN3 | 220,773 | 221,345 | 573 | 27.9 | ||
BCLA01000004.1 (Scf4) | CEN4 | 410,594 | 411,387 | 794 | 33.2 | ||
BCLA01000005.1 (Scf5) | CEN5 | 524,594 | 525,105 | 512 | 24.8 | ||
BCLA01000006.1 (Scf6) | CEN6 | 133,647 | 134,324 | 678 | 33.6 | ||
BCLA01000007.1 (Scf7) | CEN7 | 408,363 | 409,067 | 705 | 34.2 | ||
BCLA01000008.1 (Scf8) | CEN8 | 398,756 | 399,423 | 668 | 32.5 | ||
M. vespertilionis
CBS15041 |
KZ454987.1 (Scf1) | CEN1 | 410,820 | 411,340 | 521 | 15.7 | 56.6 |
KZ454988.1 (Scf2) | CEN2 | 1,275,509 | 1,276,238 | 730 | 25.8 | ||
KZ454989.1 (Scf3) | CEN3 | 322,361 | 323,277 | 917 | 38.2 | ||
KZ454990.1 (Scf4) | CEN4 | 583,450 | 584,319 | 870 | 28.9 | ||
KZ454991.1 (Scf5) | CEN5 | 802,843 | 804,042 | 1200 | 28.8 | ||
KZ454992.1 (Scf6) | CEN6 | 739,896 | 740,558 | 663 | 22.3 | ||
KZ454993.1 (Scf7) | CEN7 | 268,699 | 269,626 | 928 | 28.8 | ||
KZ454994.1 (Scf8) | CEN8 | 10,985 | 11,865 | 881 | 28 | ||
KZ454995.1 (Scf9) | CEN9 | 19,047 | 19,724 | 678 | 29.1 | ||
M. japonica
JCM11963 |
BCKY01000001.1 (Scf1) | CEN1 | 1,068,050 | 1,068,614 | 564 | 25.1 | 62.35 |
BCKY01000002.1 (Scf2) | CEN2 | 139,423 | 139,920 | 497 | 20.3 | ||
BCKY01000003.1 (Scf3) | CEN3 | 350,068 | 350,603 | 535 | 24.3 | ||
BCKY01000004.1 (Scf4) | CEN4 | 380,877 | 381,439 | 562 | 24.2 | ||
BCKY01000005.1 (Scf5) | CEN5 | 507,632 | 508,230 | 598 | 24.5 | ||
BCKY01000006.1 (Scf6) | CEN6 | 240,968 | 250,550 | 582 | 23.7 | ||
BCKY01000007.1 (Scf7) | CEN7 | 286,711 | 287,234 | 523 | 24.9 | ||
BCKY01000008.1 (Scf8) | CEN8 | 87,314 | 87,873 | 559 | 23.9 | ||
BCKY01000010.1 (Scf10) | CEN9 | 230,906 | 231,456 | 530 | 24.1 |