Table 5.
Protein profile data of meagre and gilthead sea bream fish by-product samples.
| Meagre (Argyrosomus regius) | |||
|---|---|---|---|
| Protein Name | Protein ID * | MW | emPAI |
| ATP synthase subunit epsilon. mitochondrial | XP_010742784.1 | 5730 | 4.97 |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 | XP_019118827.2 | 6895 | 1.75 |
| 60S ribosomal protein L35a | XP_010748069.1 | 12,478 | 1.38 |
| cytochrome c oxidase subunit 5B. mitochondrial | XP_010737425.2 | 14,265 | 1.13 |
| cytochrome c oxidase subunit 6B1 | XP_010734575.1 | 10,226 | 1.01 |
| U6 snRNA-associated Sm-like protein LSm2 | XP_010737833.1 | 10,846 | 0.93 |
| calcineurin subunit B type 1 | XP_010728630.1 | 19,248 | 0.77 |
| RNA-binding protein 8A isoform X1 | XP_010747091.1 | 19,985 | 0.73 |
| glutathione S-transferase omega-1 | XP_010742490.3 | 27,659 | 0.7 |
| histidine triad nucleotide-binding protein 1 | XP_010741018.2 | 13,526 | 0.7 |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 6. mitochondrial | XP_027142854.1 | 13,890 | 0.68 |
| fatty acid-binding protein. liver | XP_010731481.1 | 13,998 | 0.67 |
| gamma-aminobutyric acid receptor-associated protein-like 2 | XP_010747638.1 | 14,628 | 0.64 |
| prefoldin subunit 6 | XP_010731190.1 | 14,578 | 0.64 |
| acylphosphatase-2 isoform X1 | XP_010745126.2 | 14,823 | 0.63 |
| high mobility group protein B1 | ADX06860.1 | 23,528 | 0.59 |
| allograft inflammatory factor 1-like | XP_027142939.1 | 16,708 | 0.54 |
| hypoxanthine-guanine phosphoribosyltransferase. partial | ASW22527.1 | 18,060 | 0.49 |
| myeloid-derived growth factor | XP_019112401.2 | 18,073 | 0.49 |
| nucleoplasmin-3 | XP_027133567.1 | 18,296 | 0.49 |
| thioredoxin domain-containing protein 12 | XP_010739874.1 | 19,055 | 0.46 |
| translationally-controlled tumor protein | XP_010747176.1 | 19,174 | 0.46 |
| eukaryotic translation initiation factor 3 subunit G. partial | AFU54186.1 | 30,487 | 0.43 |
| proliferation-associated protein 2G4 | XP_010747198.1 | 43,338 | 0.41 |
| glutathione peroxidase 7 | XP_010740942.1 | 21,100 | 0.41 |
| uricase | XP_010745371.2 | 34,496 | 0.38 |
| dehydrogenase/reductase SDR family member 7C-A | XP_010739765.1 | 34,007 | 0.38 |
| lambda-crystallin homolog isoform X1 | XP_010748901.2 | 35,361 | 0.37 |
| T-complex protein 1 subunit epsilon | XP_010731936.1 | 59,425 | 0.37 |
| aldose reductase | XP_019116037.1 | 35,655 | 0.36 |
| histone-binding protein RBBP4 | XP_010731001.1 | 47,510 | 0.36 |
| eukaryotic translation initiation factor 3 subunit I | XP_019115322.1 | 36,318 | 0.36 |
| programmed cell death protein 10 | XP_027130892.1 | 24,431 | 0.35 |
| LRP chaperone MESD | XP_010746988.1 | 24,919 | 0.34 |
| erlin-2 isoform X1 | XP_027133320.1 | 37,660 | 0.34 |
| aspartyl aminopeptidase isoform X2 | XP_010748612.3 | 52,042 | 0.33 |
| adenylate kinase 4. mitochondrial | XP_019125546.1 | 25,473 | 0.33 |
| NADH dehydrogenase [ubiquinone] flavoprotein 2. mitochondrial | XP_019124447.1 | 26,706 | 0.32 |
| core histone macro-H2A.1 isoform X1 | XP_010735833.1 | 39,251 | 0.32 |
| mast cell protease 1A | XP_010728896.2 | 26,502 | 0.32 |
| RNA-binding protein FUS | XP_010735714.2 | 43,968 | 0.29 |
| prohibitin | XP_010738397.1 | 29,782 | 0.28 |
| aspartate—tRNA ligase. cytoplasmic | XP_019124484.1 | 60,564 | 0.28 |
| protein kinase C and casein kinase substrate in neurons protein 3 | XP_027141505.1 | 45,435 | 0.28 |
| eukaryotic translation initiation factor 3 subunit D isoform X1 | XP_027141552.1 | 64,192 | 0.26 |
| nucleophosmin | XP_010729733.2 | 32,171 | 0.26 |
| trimeric intracellular cation channel type A | XP_027145915.1 | 32,271 | 0.26 |
| uncharacterized protein LOC113746832 | XP_027139706.1 | 33,344 | 0.25 |
| pollen-specific leucine-rich repeat extensin-like protein 1 | XP_010728080.2 | 33,127 | 0.25 |
| WD repeat-containing protein 61 | XP_010733492.1 | 33,241 | 0.25 |
| homogentisate 1.2-dioxygenase | XP_010754782.3 | 49,895 | 0.25 |
| mitochondrial 2-oxodicarboxylate carrier isoform X1 | XP_010742940.1 | 33,148 | 0.25 |
| actin-related protein 2/3 complex subunit 2 | XP_019118121.1 | 34,256 | 0.24 |
| protein phosphatase 1B isoform X1 | XP_010733968.1 | 52,276 | 0.24 |
| uncharacterized protein LOC104934800 | XP_010748848.3 | 34,731 | 0.24 |
| tyrosine-protein kinase CSK | XP_010731405.1 | 51,060 | 0.24 |
| adenylosuccinate lyase | XP_019121532.1 | 54,567 | 0.23 |
| hydroxymethylglutaryl-CoA lyase. mitochondrial | XP_010729592.3 | 35,462 | 0.23 |
| eukaryotic translation initiation factor 4B isoform X1 | XP_010751826.3 | 70,327 | 0.23 |
| fructose-1.6-bisphosphatase 1 | XP_010746269.1 | 36,921 | 0.22 |
| ELAV-like protein 1 isoform X1 | XP_010754002.1 | 38,262 | 0.21 |
| O-acetyl-ADP-ribose deacetylase MACROD1 isoform X1 | XP_010737474.3 | 39,367 | 0.21 |
| ankyrin repeat domain-containing protein 34C | XP_010727747.2 | 57,267 | 0.21 |
| importin subunit alpha-3 | XP_010736490.1 | 57,568 | 0.21 |
| serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform X1 | XP_010752215.1 | 60,014 | 0.2 |
| calcium-binding protein 39 | XP_010729707.1 | 39,843 | 0.2 |
| 26S proteasome non-ATPase regulatory subunit 4 | XP_010739959.1 | 40,133 | 0.2 |
| alkaline phosphatase | AEL33276.1 | 59,799 | 0.2 |
| mitochondrial cytochrome b-c1 complex subunit 8 | ATN38476.1 | 9671 | 1.09 |
| mitochondrial cytochrome c oxidase subunit 6B1 isoform A | ATN38445.1 | 10,139 | 1.02 |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | AGV76781.1 | 17,214 | 0.88 |
| very long chain acyl-CoA synthetase. partial | AFP97557.1 | 46,175 | 0.27 |
| mitochondrial NAD-dependent protein deacetylase sirtuin-3 | AHX56275.1 | 48,263 | 0.26 |
| carnitine palmitoyltransferase 2. partial | AUN35172.1 | 68,338 | 0.24 |
| mitochondrial ATP synthase mitochondrial F1 complex assembly factor 1 | ATN38406.1 | 35,887 | 0.23 |
| alkaline phosphatase | AAP04486.1 | 57,515 | 0.21 |
| cullin 5. partial | AKN80426.1 | 52,490 | 0.15 |
| mitochondrial Rho GTPase 1-A | AGU38816.1 | 71,045 | 0.11 |
| macrophage mannose receptor 1. partial | AIT83004.1 | 114,777 | 0.07 |
| insulin-like growth factor-I receptor b | ALO75807.1 | 159,047 | 0.07 |
| acetyl-CoA carboxylase alpha | ANJ04915.1 | 176,414 | 0.04 |
* NCBI reference sequence; emPAI score according to Ishihama et al. [34].