Table 4.
CoV strain | 32 kDaa |
HE |
S |
|||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
205 | 217 | 275 | 108 | 158 | 210 | 143 | 147 | 151 | 157 | 257 | 318 | 328 | 525 | 608 | 785 | 805 | 828 | 888 | 909 | 927 | 1260 | |
BuCoV-179/07-11 | K | N | F | H | P | N | Y | F | I | V | N | T | F | Y | G | K | D | T | K | R | A | N |
BCoV-Mebus | M | K | V | Y | S | K | H | L | L | I | T | I | L | H | D | N | E | A | N | K | S | D |
BCoV-ENT | M | K | V | Y | S | K | H | L | L | I | T | I | L | H | D | N | E | A | N | K | S | D |
BCoV-Quebec | M | K | V | Y | S | K | H | L | L | I | T | I | L | H | D | N | E | A | N | K | S | D |
BCoV-DB2 | M | K | V | Y | S | K | H | L | L | I | T | I | L | H | D | N | E | A | N | K | S | H |
GiCoV-US/OH3/2003 | M | K | V | Y | S | K | H | L | L | I | T | I | L | H | D | N | E | A | N | K | S | D |
ACoV | M | K | V | Y | S | K | H | L | L | I | T | I | L | H | D | N | E | A | N | K | S | D |
SACoV-US/OH1/2003 | M | K | V | Y | S | K | H | L | L | I | T | I | L | H | D | N | E | A | N | K | S | D |
CRCoV-4182 | M | K | V | Y | S | K | H | L | L | I | T | I | L | Y | G | N | E | V | N | K | S | D |
HECV-4408 | NA | NA | NA | Y | S | K | H | L | L | I | S | I | L | H | G | N | E | A | N | R | A | D |
HCoV-OC43 | M | K | V | Y | A | R | R | S | V | V | T | I | L | D | D | N | E | A | N | K | S | D |
PHEV-VW572 | M | NP | NP | Y | P | K | H | I | L | I | S | V | L | T | D | N | E | T | N | R | S | D |
CoV strain | 4.9 kDab |
4.8 kDab |
12.7 kDa |
M |
N |
I |
|||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
24 | 32 | 40 | 2 | 9 | 16 | 28 | 29 | 40 | 41 | 70 | 58 | 158 | 152 | 354 | 56 | 116 | 122 | 132 | |
BuCoV-179/07-11 | P | A | T | Q | D | K | G | F | N | W | F | L | S | H | S | K | I | S | M |
BCoV-Mebus | L | E | M | P | G | M | C | S | T | C | S | I | G | Q | N | R | T | L | R |
BCoV-ENT | L | NP | NP | P | G | M | V | S | T | C | S | I | G | Q | N | R | T | L | R |
BCoV-Quebec | L | E | M | NP | G | M | C | S | T | C | S | I | G | Q | N | R | T | L | R |
BCoV-DB2 | L | E | M | P | G | M | V | S | T | C | S | I | G | Q | N | R | T | L | R |
GiCoV-US/OH3/2003 | L | NP | NP | P | V | M | V | S | NP | NP | S | I | G | Q | N | R | T | L | R |
ACoV | L | NP | NP | P | V | M | V | S | T | S | S | I | G | Q | N | R | T | L | R |
SACoV-US/OH1/2003 | L | NP | NP | P | V | M | V | S | NP | NP | S | I | G | Q | N | R | T | L | R |
CRCoV-4182 | NP | NP | NP | NP | NP | NP | NP | NP | NP | NP | S | I | G | Q | N | R | T | L | R |
HECV-4408 | L | E | T | Q | D | M | G | S | N | W | S | L | G | Q | N | R | T | L | R |
HCoV-OC43 | NP | NP | NP | NP | NP | NP | NP | NP | NP | NP | S | I | G | Q | N | NP | T | L | R |
PHEV-VW572 | F | NP | NP | P | NP | NP | NP | NP | NP | NP | S | I | G | Q | N | R | T | L | R |
NA, not available; NP, not present.
Nsp 32 kDa of HECV-4408 is not available in the GenBank database, whereas it is truncated in PHEV-VW572.
Nsp 4.9 kDa and 4.8 kDa are not present in the CRCoV-4182 and HCoV-OC43 genomes. Nsp 4.9 kDa is truncated in PHEV-VW572.