Abstract.
Significance: Optical coherence tomography (OCT) provides cross-sectional and volumetric images of backscattering from biological tissue that reveal the tissue morphology. The strength of the scattering, characterized by an attenuation coefficient, represents an alternative and complementary tissue optical property, which can be characterized by parametric imaging of the OCT attenuation coefficient. Over the last 15 years, a multitude of studies have been reported seeking to advance methods to determine the OCT attenuation coefficient and developing them toward clinical applications.
Aim: Our review provides an overview of the main models and methods, their assumptions and applicability, together with a survey of preclinical and clinical demonstrations and their translation potential.
Results: The use of the attenuation coefficient, particularly when presented in the form of parametric en face images, is shown to be applicable in various medical fields. Most studies show the promise of the OCT attenuation coefficient in differentiating between tissues of clinical interest but vary widely in approach.
Conclusions: As a future step, a consensus on the model and method used for the determination of the attenuation coefficient is an important precursor to large-scale studies. With our review, we hope to provide a basis for discussion toward establishing this consensus.
Keywords: optical coherence tomography, attenuation coefficient, single scattering, multiple scattering, dermatology, cardiology, oncology
1. Introduction
Optical coherence tomography (OCT) discriminates the backscattered light from a tissue sample based on the path length that the light has traveled, being exquisitely sensitive to light that has undergone one or a few scattering events.1 This extraordinary ability is achieved largely through coherence gating, augmented by confocal gating, and simultaneously rejects out-of-focus light and imposes a selected path length. Depth-resolved images of this backscattering in tissue can be obtained, ex vivo and in vivo, with a resolution commonly in the range 5 to , although sub- resolution has been demonstrated.2 Currently, OCT is primarily used to visualize the morphology of tissue, which can be used to differentiate pathology in some circumstances.3 There is further clinical value, in addition to visualization, to use OCT to differentiate pathology based on the altered structure and organization not readily visible with conventional clinically available imaging techniques. The structure and organization of a tissue are reflected in its optical properties,4,5 and perhaps the most accessible such property in OCT is the attenuation coefficient, describing the extinction with depth of the detected OCT signal due to absorption and scattering. To measure the OCT attenuation coefficient () and obtain diagnostic information from this measure, a model of the OCT signal and a model correlating to the optical properties (absorption and scattering coefficient; Sec. 2), and ultimately to the tissue structure, must be developed (Sec. 3).6–8 Recently, with the common advent of volumetric OCT imaging, it has become feasible to produce two-dimensional (2-D) en face, and even three-dimensional (3-D) depth-resolved maps of , representing an example of the general class of parametric imaging.9 Consequently, this topic has generated increased interest in the literature.10–12
The onset and advance of diseases or injury are often accompanied by structural and functional changes in tissues. These changes can range from easily visible scars, to increased blood perfusion during inflammation (which may be observed as redness), to an increase of intracellular mitochondrial proliferation during the early stages of cancer development. A major difference lies in the length scales at which these changes occur. Whereas scars in skin are readily observed by visual inspection, the assessment of subcellular changes requires higher sensitivity and resolution. With such techniques for in vivo assessment not widely available, the current standard for early diagnosis is the excision of small tissue sections followed by histochemical staining and microscopic evaluation by a pathologist. For many applications on all length scales, OCT may provide a viable alternative that mitigates the drawbacks of histopathology: be it in terms of patient well-being, by enabling less invasive and more immediate diagnostic procedures, or in terms of economic cost, by reducing the number of unnecessary pathological assessments.
First and foremost, OCT provides high-resolution 3-D imaging of tissue structures. For example, OCT can quantify epithelial layer thickening (up to the point of disappearance of tissue layering) that is associated with increasing stage (growth) of cancer. Second, subresolution changes in tissue morphology during onset and progression of disease lead to changes in optical absorption and scattering properties of the tissue that can be assessed through quantitative measurement of the OCT signal decay with depth. These subresolution changes are not directly available to imaging, leading to poor contrasts in the tissue structures provided by conventional OCT. For tissue characterization relevant to such small-scale changes, quantitative measurement of the tissue attenuation forms an important complement to conventional OCT (Sec. 4).
Preclinical and clinical studies in a wide variety of medical fields, including dermatology and skin, in general, cardiology, and urology, have shown promising results on the use of for tissue characterization.9,13–19 The associated literature presents multiple models and methods to determine and to relate it to tissue optical properties. To advance the application of for tissue characterization, a standardized and validated approach to obtain reliable values of , and to deal with issues such as tissue heterogeneity and the length scales on which this occurs, is needed. The aim of this review, then, is to present an overview of the models, methods, and applications of parametric imaging of attenuation by OCT and to discuss issues in the determination of with the ultimate goal of establishing a unified basis for future clinical research on using . To this end, the review is divided from here on into four sections. In Sec. 2, the relationship between tissue optical properties and the OCT attenuation coefficient is discussed. In Sec. 3, commonly used models for the OCT signal are summarized. In Sec. 4, an overview of potential preclinical applications and clinical translation of is given, accompanied with a summary of the reported values. Finally, in Sec. 5, the limitations of the models and methods, together with clinical challenges and future perspectives, are discussed.
2. Tissue Optical Properties
Absorption and scattering, the two components of attenuation, fundamentally arise from (spatial variations in) the complex refractive index of tissue . The local absorption coefficient is directly proportional to the imaginary part of the complex refractive index through , where is the wavenumber; and is the wavelength. Gradients in the real refractive index redirect light by refraction on a microscopic scale and, thus, redistribute its propagation direction, determining the local scattering coefficient and phase function. Absorption directly reduces the light intensity by converting it into other forms of energy. It is parameterized by the absorption coefficient , which, for a homogeneous distribution of absorbers, is the product of the density and absorption cross section of the absorbing particles. The wavelength-dependent absorption spectrum of tissue is determined by the presence of various chromophores in tissue, where hemoglobin, melanin, and water are dominant. However, in order to achieve maximum imaging depths, OCT generally operates in near-infrared spectral regions where the absorption by these chromophores is low. For this reason, is dominated by attenuation due to scattering at the commonly used wavelengths (800 and 1300 nm as shown in Sec. 4) for OCT attenuation coefficient analysis. Previous studies have shown approximately 10 times higher scattering than absorption in the near-infrared ranges typically used for OCT.20,21 Thus, the effects of absorption, which are notably present in OCT using visible wavelengths,22 spectroscopic OCT,23,24 and low-coherence spectroscopy,25 do not play a role in the research on the OCT attenuation coefficient reviewed here and will not be discussed further.
Analogous to absorption, the scattering strength is parameterized by the scattering coefficient , which, for low particle densities, is the product of the particle density and scattering cross section. The scattering coefficient depends both on the wavelength and the scatterer dimensions. In elastic scattering, which is relevant for OCT, no energy conversion takes place, but scattered light is spatially redirected and so the intensity of an incident wave is diminished. The scattering phase function describes this process of angular redistribution of energy. It is often convenient to parameterize the phase function in terms of Legendre moments, the first of which is called the scattering anisotropy . It physically corresponds to the average cosine of the scattering angle (, thus, implies all light is scattered in the forward direction). The phase function and scattering anisotropy are dependent on wavelength and scatterer dimensions as well. In general, large particles (with respect to wavelength) will scatter more strongly in the forward direction.
The absorption and scattering coefficients are formally defined in terms of interaction probability per unit path length. Their sum is the attenuation coefficient, , which describes the decay of the incident light due to the tissue optical properties. In contrast, the OCT attenuation coefficient, , parameterizes the loss of OCT signal with depth, caused by absorption and scattering, when this loss is modeled as a single exponential decay in the form of Beer’s law, . This simple parameterization absorbs most of the complexity, but sacrifices a direct relation to tissue optical properties (e.g., anisotropy, ; ; ) for the sake of robustness and uniqueness of the measurement. In addition, OCT system properties, such as the confocal point spread function (CPSF) and sensitivity roll-off (for Fourier-domain OCT systems) also cause a depth-dependent response. We will discuss in Sec. 3 how various signal models summarize tissue optical properties in a single parameter, . Modeling the connection between tissue structure, optical properties, and measured quantities remains a formidable challenge, which we will not resolve in this review. Most research discussed here will correlate tissue type and structure (through the gold standard of histopathology) to the measured OCT attenuation coefficient.
3. Models of the OCT Signal
In OCT, the field in the sample arm results from electromagnetic scattering of broadband light in tissue, a complex dielectric. Because of the variations of the complex refractive index in tissue, and because of the many length scales at which this variability contributes to the scattered field,26 it is generally impossible and almost certainly impractical to strive for an exact inversion of Maxwell’s equations, solving them for . As the field propagates, energy is removed from the incident beam while backward scattering feeds the returning field, as shown in Fig. 1; the attenuation coefficient is a single parameter to quantify the strength of this interaction of light and tissue. Extraction of the from the acquired data requires a quantitative model for the OCT signal that can be applied to the measurement.
A number of different models have been proposed to describe the OCT signal. In order of increasing complexity and the number of free parameters, these models may be summarized as “single-scattering,” “multiple-scattering” (including stochastic methods such as Monte Carlo), and “full electromagnetic wave modeling.” Among them, the single-scattering model (Sec. 3.1) is most commonly used, whereas others (Sec. 3.2) have been applied to a smaller number of samples or are still in the early stages of development. All of these models need to be calibrated with system-specific parameters for practical applications.
3.1. Single-Scattering Model
The simplest models for the OCT signal rely on the first-order Born approximation; they assume that the incident beam propagates in the forward direction, attenuated by absorption and scattering according to Beer’s law, until a backward scattering event reflects the light back toward the source. Any detected light from the sample arm has interacted with the sample only in a single-scattering event. For plane wave illumination, homogeneous optical scattering, and in the absence of noise and any instrumental effects, the mean OCT signal may be written as28
(1) |
where is the OCT signal amplitude, is the amplitude at (the tissue boundary), and is the attenuation coefficient. Brackets denote the average over different spatial realizations of the complex refractive index .
One subtlety may be noted: in Beer’s law, the absorption coefficient and scattering coefficient govern the decay of the intensity , not of the field amplitude described in Eq. (1). The attenuating medium is, however, traversed twice since the signal travels from the source to a depth and then back toward the detector, and the path length is equal to . Thus, the detected signal is but since in the absence of noise , the factor of 2 in the exponent is canceled in Eq. (1). In Fourier-domain OCT, the spatial signal is obtained through Fourier transform. For optimum processing speed, in most applications, the fast-Fourier transform (FFT) algorithm is used, after resampling of the spectral interferogram onto a uniform wavenumber () basis. The outcome of this procedure is the OCT amplitude versus depth as given by Eq. (1). Alternatively, the power spectral density or may be used, which would yield the OCT intensity versus depth.
The models discussed here aim to quantitatively describe the OCT signal in terms of the tissue attenuation, , a number that is based on the assumption of single scattering. However, even in the presence of multiple scattering (Sec. 3.2), the part of the signal decay caused by absorption and scattering is often adequately modeled as a single exponential decay, albeit with a decay coefficient (because multiple scattering causes more light to be detected than expected based on the single-scattering model). Without additional controlled experiments, for instance at different scatterer concentrations, it may not be possible to say with certainty that a measurement was done in the single-scattering regime. Thus, the adoption of allows us to describe tissue attenuation as measured by OCT as an effective parameter that does not require an estimate of the relative weight of single and multiple scattering contributions.
3.1.1. Practical application of the single-exponential decay model
Already when introducing this model for the OCT signal, Schmitt et al.1 realized that Eq. (1) needs to be modified for finite numerical aperture (NA). They introduced a correction for the divergence of the sample beam and used this to quantify the attenuation and backscattering coefficients of weakly scattering microsphere suspensions. In addition, for Fourier-domain OCT, the system sensitivity decreases with depth from the zero-delay point depending on the sampling of the wavenumber axis. A constant factor describes the coupling efficiency of the input amplitude to the OCT system, which is redirected back toward the detector with a power-backscattering coefficient . With these factors taken into account, including noise, Eq. (1) becomes
(2) |
Here, the backscattering coefficient, , depends on the NA of the system since that determines the collection angle. Coordinate is the geometrical distance from the tissue boundary, into the tissue. The factor is the CPSF, which is derived from the beam divergence correction factor1 to yield the following expression for a Gaussian beam:29
(3) |
where is the geometrical depth location of the focus relative to the tissue boundary, is the Rayleigh length of the Gaussian beam incident on the sample, and is the average refractive index of the medium along the beam. The factor of 2 in takes into account the increase in for a diffuse reflector compared to specular reflector.29,30
The sensitivity roll-off of the system is described by , where is the distance between the zero-delay position of the interferometer and the tissue boundary. The finite sampling density of the interference fringes and the finite resolution of the frequency scan together reduce the signal far from the zero-delay position. The former derives from the detector pixel width in spectral-domain OCT, and from the detector integration time in swept-source OCT, and is described by a sinc function. The latter factor is the spectrometer optical resolution in spectral-domain OCT (spot size in the spectrometer), or the instantaneous linewidth in swept-source OCT, and can be modeled as a Gaussian function. Combining resolution and sampling dependencies, is expressed as31
(4) |
Here, is the maximum imaging depth of a system with sampling pitch at center wavelength and at average group refractive index of the medium, measured with respect to zero delay, and is the ratio of spectral resolution to the sampling pitch.32,33 Since spectral resolution and sampling pitch are usually finer in swept source systems, is flatter for swept-source systems compared to spectral-domain systems, resulting in a higher signal-to-noise ratio (SNR) at greater depths. Examples of the confocal PSF and sensitivity roll-off from a swept-source OCT scanner are shown in Fig. 2.
Measurement of the attenuation coefficient requires quantitative modeling of the instrumental response function, CPSF, and sensitivity roll-off, according to Eqs. (3) and (4). If the detailed optical design parameters (specifically, the focal depth and Rayleigh length of the imaging optics, and resolution and sampling of the frequency scan) are unknown, these functions can be experimentally determined from the measurement of a reflector versus depth, and a knife-edge measurement may be used to yield the Gaussian beam parameters.32,34 Alternatively, a very weakly scattering calibration sample may be used to determine the CPSF and sensitivity roll-off function by substituting Eqs. (3) and (4) into Eq. (2) and then fitting it to the OCT signal amplitude, with , , and as free parameters and setting . Another approach based on an OCT measurement of a very weakly scattering calibration sample is by first subtracting the mean noise level (typically estimated in a deep region with only noise present) included in Eq. (2) and then assuming so that the signal of the calibration sample only comprises . The signal from a highly scattering sample, after removing the noise level similarly, can then be divided by the calibration signal, canceling the , directly yielding the data for attenuation analysis.17 For example, Gong et al.35 used a solution of -diameter polystyrene microspheres with an estimated attenuation coefficient of . As the CPSF is influenced by the refractive index of the sample, it is desirable for the calibration sample to have a refractive index similar to the samples to be studied.
3.1.2. Fitting method
Nonlinear least squares curve fitting, preferably applied to the amplitude data, is the most straightforward approach for obtaining using the single-scattering model: by varying the free parameters and while fixing the other parameters to optimize the fit of Eq. (2). Note that if the noise is not corrected or cannot be ignored, squaring the OCT amplitude induces cross terms that can influence the fitted attenuation coefficient. Alternatively, a linear fit to the logarithm of the OCT data can be performed after subtraction of the logarithm of the CPSF, sensitivity roll-off, and noise from the data. Any fit method requires a region of interest (ROI) or window selection of axial fitting range (AFR), as shown in Fig. 3, which can be done manually or automatically. We note, however, that for most applications, manual selection would be too labor-intensive in any eventual routine use. The analysis is performed under the assumption that the tissue optical properties are homogeneous within the window, so the axial resolution of the attenuation measurement is limited by this window size (i.e., AFR). This assumption may be verified by uncertainty and goodness-of-fit estimates (e.g., and residue) used to assess fit quality. Challenges within the fitting method are the influence of speckle on the goodness of the fit, AFR selection, and noise-level selection. Lateral and/or axial averaging can reduce the variability due to speckle in the A-scan data prior to fitting. By averaging, the resolution of the measured is decreased, the suitability of which must be considered against the needs of the application.
Performing linear fits on logarithmically compressed data is computationally more efficient, but the procedure is sensitive to underestimation of large attenuation coefficients in the presence of noise, depending on the window length. Yuan et al.36 showed that values of of 5 and were underestimated in linear fits for ROIs larger than 800 and , respectively. A shorter window means that stronger attenuation can be characterized without noise compromising the analysis. Low amplitudes at the end (greater ) of the ROI, which are more strongly affected by noise, have a larger weight in the compressed than in the noncompressed data. This issue may be readily dealt with by weighting the data point by the SNR, as has been used in optical coherence elastography.37
The range in which the fit can be considered valid can be assisted by a comparison between the modeled signal decay within the ROI, compared to the noise level of the OCT system; the range typically is in the order of a few times the attenuation length (about 4 times in the example cited above).36 Multiple fits with a small depth variation of the ROI may yield an average and standard deviation of ; in this way, the influence of the ROI selection on the obtained value of can be taken into account.28 Heterogeneity in the tissue and buildup of multiple scattering can be mitigated by adaptively choosing a fitting ROI and analyzing each A-scan in sections leading to 2-D parametric imaging of tissue properties.16 Fitting of very thin tissue layers (e.g., retinal layers) or tissue layers close to the surface (e.g., the epidermis) is challenging because there are insufficient sample points for a reliable fit within a homogeneous layer.38
3.1.3. Depth-resolved method
An interesting depth-resolved method was proposed by Vermeer et al.38 for pixel-by-pixel determination of inspired by attenuation compensation in ultrasound data.39 It does not require a fit window and, therefore, retains the OCT resolution in the attenuation image. Based on an integral formulation of the intensity [and not amplitude as in Eq. (1)] in the single-scattering model, is calculated based on two main assumptions: (1) all the light is extinguished within the OCT image depth range; and (2) the backscattered light is a fixed fraction of the attenuation coefficient, i.e., the ratio of and is constant. Assuming a constant intensity over a pixel, the attenuation is expressed as
(5) |
where is the ’th pixel along an A-scan and is the intensity of the signal at the ’th pixel. This equation can be simplified by applying a first-order linearization of around to give
(6) |
It is noteworthy that the validity of the sum to infinity in Eq. (6) requires that the values of the OCT signal in the last pixels in the image should be negligible, meeting the first assumption above. In the original formulation38 and subsequent applications40 of the depth-resolved attenuation coefficient analysis, the CPSF and sensitivity roll-off in depth were not taken into account. Smith et al.41 introduced these corrections, including for noise. The depth-resolved method was validated on homogeneous and layered phantoms by Vermeer et al.38 and showed promising results for estimating attenuation coefficients with a higher axial resolution. As pointed out above, though, the method relies on the assumptions of complete extinction in an A-scan and a fixed ratio between and . The former becomes more problematic for pixels toward the end of the A-scan and when prominent multiple-scattering background is present, which can be eliminated by carefully choosing a cutoff constant.40,42 The latter assumption does not hold in the case of absorption or for scatterers with a strongly structured angular scattering cross section, such as Mie scatterers. Since is directly proportional to in Eq. (6), the analyzed attenuation contains speckle. This artifact may be dealt with by conventional methods such as local averaging or median filtering, which will then lower the resolution. Validation studies on tissue are still scarce, so the impact of the assumptions and necessary postprocessing on the accuracy of the extracted attenuation coefficients, and their utility for tissue classification, is not yet clear.
Alternatively, Yuan et al.36 proposed a distinct frequency-domain method, aided by Fourier transformation, to extract the attenuation coefficients. The method was compared to the fitting method, showing robust performance and fast computation. It is a potentially powerful alternative to the fitting and depth-resolved methods, the merits of which may become clear with wider adoption in future.
3.2. Multiple Scattering
In addition to singly scattered light, multiply scattered light that matches the detected optical path length set by the reference delay contributes to the OCT signal.43–46 In highly forward scattering tissues such as blood, multiple scattering can be expected.47–49 The contribution of multiply scattered light leads to a lower resolution and introduces a signal additional to that of singly scattered light. The contribution from multiply scattered light increases for (1) larger depths,50 (2) samples with stronger forward scattering,28 (3) samples with higher scattering coefficients,28 and (4) lower NAs.50
Figure 4 shows the difference in OCT signal between an isotropic and anisotropic (forward scattering) sample in order to demonstrate the contribution of multiply scattered light. The two samples comprise silica beads with diameter of, respectively, 0.5 (in black as the isotropic sample) and (in red as the anisotropic sample). They have the same attenuation coefficient estimated by Mie simulation and present the same linear decay (i.e., slope) in the logarithmic OCT signal in the single-scattering regime. Multiple scattering lifts up the linear decay at large depths with the large particles exhibiting the contribution by multiply scattered light from a much shallower depth than the small particles and, thus, generating more significant deviation from the single-scattering model. Faber et al.30 have shown that, for scattering media with , the single-scattering model-based gives a good estimate of .51,52 Experiments on samples with controlled optical properties show that multiple scattering starts to contribute significantly to the OCT signal for samples with or .28
To date, there are three main approaches to take into account for multiple scattering in OCT: probabilistically, with Monte Carlo simulations;53,54 and analytically, with the extended Huygens–Fresnel (EHF) model for OCT45,55,56 or ab initio full-wave simulations based on Maxwell’s equations.57–59 We briefly discuss each below.
3.2.1. Monte Carlo simulation
Monte Carlo simulation is a probabilistic approach to simulate the scattering trajectory of photons in the sample. The simulation tracks the trajectory of photons in the sample arm and outputs the photon count and corresponding path lengths. An assumption for the phase function of the sample is needed as an input to the simulation, and restrictions on photon count and trajectory are required to create time-efficient simulations. Multiple studies have been done on Monte-Carlo-based simulations of the OCT signal.46,60,61 Jacques et al.53 applied Monte Carlo simulation to derive a general equation to correct the OCT attenuation coefficient for the contribution of multiple scattering to determine tissue optical properties, including and . This approach was applied in subsequent studies by Levitz et al.54 to study the growth of collagen gels.
In general, Monte Carlo simulations do not model the interference of the reference with the sample light explicitly. Karamata et al.43,44 combined their analytical model, in which the coherence was taken into account, with Monte Carlo simulations to account for both singly and multiply scattered light. A limitation of Monte Carlo simulations is that the results obtained depend on the specific chosen input parameters, such as the system-specific optical geometry, and the phase function, which is generally not well known for tissue and, indeed, unlikely to be constant across the simulated region.62 Monte Carlo approaches are useful for forward modeling, but their probabilistic output cannot be straightforwardly inverted for analysis of experimental data.
3.2.2. Extended Huygens–Fresnel model
The EHF model for OCT was introduced by Schmitt and Knüttel45 and elaborated by Thrane et al.55,56 The model assumes the paraxial approximation [i.e., , where is the angle of the scattered wavevector relative to the incident wavevector] and the theory is applicable to samples with . The mean OCT intensity is expressed in three terms: (1) the singly backscattered field, (2) the multiply (forward) scattered field, and (3) the coherent cross-term between these two fields. The expression for the mean squared OCT amplitude (which is equal to OCT intensity) is
(7) |
where
(8) |
(9) |
and is the depth coordinate in tissue measured from the sample boundary at . Equation (8) is the expression for the local beam waist in the absence of forward scattering, . Here, is the beam waist at the focus in air. The term is the root mean square of the average scattering angle and related to the scattering anisotropy through . The factor of 2 in front of the Rayleigh length of the beam is introduced to account for the doubling of the Rayleigh length for diffuse reflection, as described earlier.30 Equation (9) is the expression for the local beam waist in the presence of multiple forward scattering, .56 Based on the EHF model, multiply scattered light influences the OCT signal at all depths. Assuming highly forward scattering media, the EHF model can be fitted to the OCT data using Eq. (7) to obtain tissue optical properties, including and . This is in contrast with the single-scattering formalism, which absorbs the effects of multiple scattering in the effective attenuation coefficient .
A limitation of the EHF model is that and are codependent parameters, which means that a change in can be compensated with a change in without any change in the outcome of the fit statistics.30 A priori knowledge of or of the sample can be used to restrict the fit.63 Alternatively, the EHF model is used with a priori knowledge of and for controlled silica bead samples to simulate the OCT signal, in order to estimate the contribution of multiple scattering to the single-scattering model-obtained . The model-based estimations were in good agreement with the experimental data for a large range of scattering and anisotropy values in silica bead samples.28,63 An absorption term was recently introduced in the EHF model to measure not only the scattering coefficient and anisotropy but also the absorption coefficient, which is usually assumed negligible for OCT wavelengths.64 However, further validation of such absorption coefficient measurement is still needed.
3.2.3. Modeling of the OCT signal with Maxwell’s equations
A full-wave mathematical model of OCT image formation, based on Maxwell’s equations, has been developed by Munro et al.57–59 Using this model, 2-D and 3-D OCT images can be simulated. Compared to the above-mentioned models, the Maxwell’s equations-based model does not need to assume the first-order Born approximation or to consider an ensemble average of the scattering particles. This full-wave approach could, in general, allow modeling of the OCT signal for a variety of system configurations, beam geometries (e.g., Gaussian or Bessel), and (subresolution) sample parameters without making any approximations. The refractive index distribution of the sample is used as an input parameter, which works well for controlled phantoms; however, at the moment, is not generally known for biological tissue, and often not even in statistical terms. Full-field models are very computationally expensive to run, especially for high NAs, which limits the volume and complexity of the sample to be analyzed.58 Efficiency improvements can be achieved by precomputing scatterer microstructure,65 and by using analytical solutions of Maxwell’s equations for specific shapes, such as scattering from cylinders.66,67 These models remain challenging to implement and use because of their complexity and computational expense. With further development and the increase in computing power, they offer great potential to explore the links between microscopic structure and macroscopic parameters in quantitative imaging of tissue optics and validate the accuracy of parametric models, such as single scattering or EHF.
3.3. Summary of Models
In summary, a variety of models for the OCT signal have been proposed in the literature, ranging in complexity from a single exponential fit to a full-wave mathematical model based on Maxwell’s equations. The simplest models lack consideration of system parameters and the contribution of multiply scattered light. However, as models increase in complexity, more input parameters are required. The EHF model requires codependent sample-related parameters, which cannot be determined independently without a priori knowledge of or . For Monte-Carlo-based estimations, the same problem arises, for which the scattering phase function has to be assumed. Although multiple models for the OCT signal have been studied in the literature, the most frequently applied one remains the single exponential model, relying upon the predominance of single scattering, such that the first-order Born approximation is valid. The single exponential model, together with accurate correction for system parameters, provides a valid approach without the mutual dependence of the fit parameters. Alternatively, the depth-resolved method can be applied to estimate per pixel in depth, avoiding assumptions of tissue homogeneity in the axial direction. Although more work is undoubtedly needed to establish the level of model sophistication required, it is likely that meaningful results require one to be in an image-forming regime, and that image formation likely requires the single scattering assumption to be valid. Once beyond this depth, the dominance of multiple scattering may mean that more sophisticated models do not bear fruit.
4. Applications of OCT Attenuation
OCT attenuation has been increasingly used for tissue characterization to provide additional contrast to the OCT structural information. Methods of analysis have made use of individual or multiple A-scans/B-scans or of volumetric scans to map the 2-D distribution of the attenuation as en face attenuation images, as shown in Fig. 5, which, in general terms, represents a form of parametric imaging.8,9 This section presents a survey of applications seeking to use OCT attenuation to characterize tissue, with a focus on skin, arteries, and tissues with cancer, including summarizing the characteristic attenuation coefficients of normal and diseased tissues. Overall, the results show promising examples of contrast between normal and diseased tissue. However, there are general issues with quantification evident in the range of experimentally reported values, which will be discussed in Sec. 5.
4.1. Skin: Dermatological Conditions and Burns
Cutaneous tissue in humans comprises a generally thin, superficial cellular epidermis overlaying a thicker layer of dermis containing various scatterers, including abundant collagen fibers. The OCT attenuation in the dermis has been assessed in vivo, but there is generally limited data in the epidermis,1 because on many parts of the body it is too thin (sub for hairy skin) to be readily amenable to measurement. Schmitt et al.1 were the first to apply an OCT-based method (based on the single-scattering model) to measure the attenuation coefficient in normal cutaneous dermal tissue in vivo. They performed measurements at multiple body locations on two human subjects, including the forearm (mean : 4.6/4.7; AFR: 200 to ), finger (mean : 3.7/5.0; AFR: 250 to ), and lip (mean : ; AFR: 100 to ).
Later, Kholodnykh et al.51 studied and corrected the systematic errors in the measured attenuation coefficient caused by the CPSF. They applied their method to human forearm in vivo, reporting much higher attenuation values of dermis (: 10 to ; AFR: ) than Schmitt et al. at the same mean wavelength (1300 nm). They attributed this difference to the different experimental protocols, such as the pressure due to the contacting probe and the use of clearing agent (i.e., glycerol) in Schmitt et al.’s work. These factors will be further discussed in Sec. 5.
The single-scattering model used in these studies assumes tissue homogeneity over the depth range (i.e., AFR) used to estimate the attenuation coefficient. However, the dermis is perfused with a network of blood vessels with highly distinct optical properties. Experimental determination of the OCT attenuation coefficient of whole blood is challenging due to the very high forward scattering of red blood cells.47 Bosschaart et al.68 modeled scattering properties of whole blood using Mie theory (to describe a single blood cell) combined with the Percus–Yevick structure factor to account for nonlinear scaling of optical coefficients with volume fraction, which are especially prevalent at high hematocrits. At 1300 nm, they found a high scattering coefficient of (close to values reported from the literature of at 1300 nm68) and a scattering anisotropy () of 0.96, indicating a very high degree of forward scattering by whole blood. These extreme values for blood compared with average values above in the 2- to range highlight the distinct lack of homogeneity of the dermis. Additionally, many conditions are characterized by visible redness of the skin, indicating higher levels of blood than in healthy skin. This inhomogeneity leads to artifacts in the estimated attenuation coefficients when a vessel is contained in the fitting window, as shown in Figs. 6(b) and 6(c). Appreciation of this issue has only fairly recently been highlighted.35 Such artifacts may cause either underestimation or overestimation of the attenuation, depending on the size of the fitting window and its depth position relative to the vessels.
To mitigate this obvious source of inhomogeneity, Gong et al. presented a method to identify and mask the blood vessels from the attenuation estimation, using OCT speckle decorrelation for their detection,70,71 and provided parametric imaging of the attenuation coefficient of the remaining tissue.35 The resulting mean attenuation coefficient of dermis from normal human subjects () is (AFR: ). Another distinction of their work is the use of a polarization-sensitive OCT (PS-OCT) scanner to mitigate the possible errors in the quantified attenuation coefficients due to the birefringence of dermal collagen, measured to be 0.4 to by Gong et al.72 at 1325-nm wavelength and 0.5 to by Pierce et al.73 at 1300-nm wavelength.
Using the attenuation coefficient of normal dermis as the baseline, OCT attenuation has been applied to the assessment of cutaneous conditions, such as psoriasis, which is characterized by patches of abnormal (often flaky and red) skin. Welzel et al.74 demonstrated a lower attenuation coefficient (: ; AFR: not given; ) of psoriasis than in normal human skin (: ; AFR: not given; ) in the upper dermis at 1300-nm wavelength. Their longitudinal monitoring further indicated an increase of the OCT attenuation in psoriasis after therapy (: ; AFR: not given; ), approaching the measured normal skin attenuation (: ; AFR: not given). They believe these characteristic attenuation coefficients are associated with inflammation in psoriasis, which can impact the density and distribution of collagen fibers and, thus, the scattering properties of the dermis. The impact of the presence of vasculature on these results is unknown.
Another example of the application of OCT attenuation measurement to cutaneous conditions is the assessment of human burn scars. Burns arise from various causes and lead to scarring, which presents as the proliferation of collagen and blood vessels in pathological scarring, including hypertrophic scars and keloids. In contrast to pathological scars, normotrophic scars present similar characteristics to the surrounding normal skin and represent the best clinical endpoint. To investigate the optical properties of burn scars, Gong et al.35 quantified the OCT attenuation of dermis with masking of blood vessels, providing parametric images. They found significantly lower values (hypertrophic scar : ; normotrophic scar : ; AFR: ) than those of the contralateral or adjacent normal skin (: ; AFR: ; ), using a PS-OCT scanner. They attributed this difference to the reduced scattering in scar tissue arising from the higher water content and supported this assertion with corresponding optical propagation simulations showing a similar trend.
Es’haghian et al.69 further extended vasculature-masked OCT attenuation imaging to longitudinal monitoring of hypertrophic scars undergoing fractional laser ablation treatment, as shown in Figs. 6(d) and 6(e). They reported characteristic changes in the scar attenuation after treatment: an increase () and decrease () in the attenuation coefficient, respectively, in immature and mature scars; there was minimal change in the higher OCT attenuation coefficient (: ; AFR: ) of the normal untreated skin (). The difference in the average measured attenuation coefficient of normal skin from that estimated by Gong et al.35 could be due to many factors, including intersubject variation in skin type, variation in skin locations, the use of different AFRs and different instruments, and the use of PS-OCT. The longitudinal measurement/imaging of OCT attenuation provides an important approach for monitoring the tissue response to treatment. Assuming careful calibration is performed at each time point of measurement/imaging, longitudinal imaging potentially provides a useful relative measure of alterations over time, but more research is required to understand the meaning and reliability of absolute attenuation coefficients of skin.
There is also preliminary use of OCT attenuation to analyze cancer tissue in skin, which will be summarized in Sec. 4.3 on oncology.15,64 Additionally, Olsen et al.75 used OCT attenuation as a surrogate measure of skin edema, reporting an increase of the attenuation coefficient in edema of 10 subjects (median increased from at baseline to ).
Overall, the characteristic attenuation coefficients of normal skin and skin conditions (Table 1), and their changes during treatment, indicate the great potential of OCT attenuation for clinical monitoring of skin conditions. The reported values in Table 1 show variations among different body locations, possibly caused by different tissue microstructures, and also for the same body locations, such as the normal forearm skin. This might be due to the variation between subjects and, more importantly, the inconsistency in data acquisition and processing methods. Such variations suggest the need for a standardization of methods in future to allow better comparison between studies.
Table 1.
Cutaneous tissue | Reference | Wavelength (nm) | AFR () | Correction | Location | Sample number | Attenuation () | |
---|---|---|---|---|---|---|---|---|
CPSF | SRF | |||||||
Normal skin | Schmitt et al.1 | 1300 | 200 to 400 | Y | N/A | Forearm | 2 subjects | 4.6/4.7 (mean) |
250 to 500 | Finger | 3.7/5.0 (mean) | ||||||
100 to 500 | Lip | 2.0 (mean) | ||||||
Kholodnykh et al.51 | 1300 | 100 | Y | N/A | Forearm | NS | 10 to 13 | |
Gong et al.35 | 1325 | 200 | Y | Y | Forearm, thigh and lower leg | 6 patients | ||
Es’haghian et al.69 | 1300 | 250 | Y | Y | Upper arm, abdomen, back, thigh and calf | 7 patients | ||
Welzel et al.74 | 1300 | NS | NS | NS | Including forearm | 28 patients | 3.6 to 4.2 (mean) | |
Psoriasis | Welzel et al.74 | 1300 | NS | NS | NS | Including forearm | 28 patients (17 after treatment) | (untreated) |
(treated) | ||||||||
Burn scar | Gong et al.35 | 1300 | 200 | Y | Y | Forearm, thigh and lower leg | 6 patients | (hypertrophic) |
(normotrophic) |
Note: Papers highlighted in bold present parametric attenuation coefficient imaging; others represent point measurements. AFR, axial fitting range; CPSF, confocal point spread function; N/A, not applicable; NS, not specified; SRF, sensitivity roll-off function.
4.2. Cardiology
The arterial system can be affected by atherosclerosis, a systemic inflammatory disease that gives rise to focal formations of fatty deposits in the vessel wall. This is a problem, in particular, in the carotid and coronary arteries, where disruption of those “plaques” can trigger thromboembolism, leading to ischemia in the brain (stroke) or heart muscle (myocardial infarction, i.e., heart attack). Catheter-based intravascular OCT is a powerful method for visualization of atherosclerosis and is routinely applied in guidance of minimally invasive coronary interventions. The normal structure of healthy coronary arterial wall consists of three layers: (1) a thin, bright intimal layer; (2) a darker medial layer with a thickness of 200 to , consisting of smooth muscle cells (SMCs); and (3) the connective adventitia, which has a signal-rich and heterogeneous appearance on OCT. An example may be seen in Fig. 7 (top region). Atherosclerotic plaques form in the intimal layer, which thickens under the influence of the deposition of cholesterol and related compounds. Accumulation of these species triggers an inflammatory response, which leads to hypoxic conditions and subsequent necrosis. Detection of these lipid-rich necrotic cores in atherosclerotic plaque potentially enables pre-emptive interventions by medication or stenting. Quantitative characterization of the different tissue types, including calcification and fibrous tissues, is a potentially important application of OCT attenuation imaging.
Quantitative OCT analysis of atherosclerosis was first explored by Levitz et al.,77 who demonstrated that there is quantitative OCT attenuation contrast in different ex vivo arterial tissue components. Two studies by van der Meer et al.7,78 showed that such information could be extracted locally and, thus, be used for differentiating tissue types. The single-scattering model was applied to OCT data acquired from carotid arteries () ex vivo with an 800-nm time-domain scanner to quantify the attenuation of various tissue constituents.78 Differences between tissue types (lipid-rich, fibrous intimal thickening, calcification, and thrombus) were attributed to the different scatterers in these tissues, such as the highly scattering red blood cells, which lead to a high attenuation in the thrombi. These results were extended by imaging data of atherosclerosis with a time-domain system at a wavelength of around 1300 nm.7 They demonstrated the feasibility of using OCT attenuation to differentiate tissue types. Angle dependence of scattering parameters was investigated by Xu et al.,8 who demonstrated a strong dependence on imaging orientation for the highly oriented SMCs in the tunica media.
Van Soest et al.16 further implemented OCT attenuation imaging of coronary arteries () in a catheter-based OCT system, approximating in vivo clinical imaging of coronary arteries. They demonstrated the differentiation of necrotic core and macrophage infiltration () from calcific and fibrous arterial tissue (: 2 to ) using the OCT attenuation (AFR: ). Ex vivo data were acquired with a time-domain OCT system. Figure 8 shows an example of a coronary atherosclerotic lesion with a necrotic core behind a calcified region, identified from histology [Fig. 8(b)] and marked in red in Fig. 8(c).16 The necrotic core and calcified region exhibit similar signal strengths in the structural OCT image in Fig. 8(a). Aided by OCT attenuation imaging in Fig. 8(d), the necrotic core is better contrasted with the calcified region than in the original OCT image. In vivo data from this study, recorded with a prototype swept-source OCT scanner, showed qualitatively and quantitatively similar attenuation patterns. These results illustrate the promise of OCT attenuation to complement the qualitative arterial tissue classification that relies on interpretation of image texture and structural features for determination of tissue composition and plaque type. Table 2 summarizes the quantified attenuation coefficients of various tissue types.
Table 2.
Arterial tissue | Reference | Wavelength (nm) | AFR () | Correction | Location | Attenuation () | |
---|---|---|---|---|---|---|---|
CPSF | SRF | ||||||
Intimal thickening/fibrous | van der Meer et al.78 | 800 | NS | Y | N/A | Carotid | |
van der Meer et al.7 | 1300 | NS | Y | N/A | NS | ||
Xu et al.8 | 1320 | NS | Y | N/A | Coronary | ||
van Soest et al.16 | 1310 | Y | Y | Coronary | 2-5 | ||
Liu et al.40 | 1310 | N/A | N | N | Coronary | ||
Lipid-rich region | van der Meer et al.78 | 800 | NS | Y | N/A | Carotid | |
van der Meer et al.7 | 1300 | NS | Y | N/A | NS | ||
Xu et al.8 | 1320 | NS | Y | N/A | Coronary | ||
van Soest et al.16 | 1310 | ≥200 | Y | Y | Coronary | ||
Liu et al.40 | 1310 | N/A | N | N | Coronary | ||
Calcification | van der Meer et al.78 | 800 | NS | Y | N/A | Carotid | |
van der Meer et al.7 | 1300 | NS | Y | N/A | NS | ||
Xu et al.8 | 1320 | NS | Y | N/A | Coronary | ||
Liu et al.40 | 1310 | N/A | N | N | Coronary | ||
Macrophage infiltration | van Soest et al.16 | 1310 | Y | Y | Coronary | ||
Liu et al.40 | 1310 | N/A | N | N | Coronary | ||
Thrombus | van der Meer et al.78 | 800 | NS | Y | N/A | Carotid | |
Kume et al.81 | 1300 | NS | N | NS | Coronary | (red)a | |
(white)a |
Note: Papers highlighted in bold present parametric attenuation coefficient imaging. AFR, axial fitting range; CPSF, confocal point spread function; N/A, not applicable; NS, not specified; SRF, sensitivity roll-off function.
Measured in the data presented by the authors.
The attenuation coefficients vary significantly between the different studies reported in Table 2. Qualitative identification of vascular tissue has generally followed the classification of Yabushita et al.:79 fibrous tissue is homogeneous and signal-rich; calcified tissue is signal-poor with well-defined borders; and lipid-rich/necrotic tissue is signal-poor with diffuse borders. This set of criteria implicates low attenuation for both fibrous and calcified tissues, with high backscattering for fibrous tissue and low for calcifications. Based on a tissue optics interpretation of the qualitative classification, lipid-rich/necrotic tissue can be inferred to have strong attenuation. The attenuation (and backscattering, when provided) values reported by Xu et al.,8 van Soest et al.,16 and Liu et al.40 are consistent with this pattern; whereas, the contrast measured by van der Meer et al.7,78 appears to be inverted. A possible explanation of this difference may lie in the selection of fitting regions, which in the case of van der Meer et al. appears to exclude the signal-rich proximal areas in attenuating tissues, causing them to derive data from the slowly varying multiple-scattering background. The values for different arterial tissue types do not significantly depend on temperature or tissue fixation, which eases the requirements on ex vivo studies.80
More recently, Liu et al. implemented a depth-resolved method on intravascular OCT scans acquired in vitro on 135 images from coronary arteries on two cadaver hearts.40 Using a variety of signal descriptors (intensity, attenuation, and backscatter), they were able to distinguish up to six different tissue types (mixed, calcified, fibrous, lipid-rich, macrophages, and necrotic core). Table 2 shows that the attenuation coefficient values reported by Liu et al.40 are much smaller than those reported by other studies.8,16 Two possible causes of this discrepancy are the blind reconstruction of amplitude (not intensity) data from 8-bit images stored on the acquisition system, which may introduce an unknown scale factor; and the omission of correction factors for CPSF or sensitivity roll-off. They also reported maximum and 95th percentile values for the parameters that they computed. These quantifiers, for the top of the distribution, are in good agreement with the values reported by Xu et al.8 and van Soest et al.16 The attenuation values computed by the depth-resolved model are expected to be affected by OCT speckle (see Sec. 3), but in general the effect of speckle filtering on this relation has not been studied. In the present case, the data was filtered post-hoc by application of a median filter, but the quantitative implications of this operation are unknown.
Gnanadesigan et al.82 derived relations between and lipid-rich atherosclerotic plaque based on optimal classification accuracy in a receiver operating characteristic analysis. They showed that, with histology control, lipid-core plaque has . Thin-cap fibroatheroma, as identified in clinical OCT images, was found to have .83 Their approach to comprehensive validation of 3-D data sets, rather than matching of individual OCT images to histology, enables statistically robust analyses with minimal operator bias.
When different arterial tissue types present similar attenuation properties, tissue characterization with OCT attenuation coefficient alone is ineffective. A combination of the OCT attenuation with additional OCT-derived optical properties by Xu et al.8 and Liu et al.40 resulted in statistically significant discrimination between tissues types. An example from Xu et al. is shown in Fig. 9, where the calcific (red) and fibrous (green) tissues are better differentiated using the combined attenuation and backscattering coefficient image in Fig. 9(c) than using only the attenuation in Fig. 9(b). Such combination of multiple parameters provides one promising approach to enhance tissue contrast and, thus, may provide better tissue classification for future applications, if they can be reliably extracted from catheter-based measurements.
4.3. Oncology
Another promising application of OCT attenuation imaging is in the characterization of cancer. Expected changes in tissue caused by cancer, relevant to OCT, include altered cellular arrangement; density and size of nuclei and organelles; proliferation and changes in the organization of the extracellular matrix; and changes in the blood and lymphatic microvasculature.84,85 McLaughlin et al.9 were the first to apply parametric OCT attenuation imaging to assess cancer ex vivo, extracting an attenuation coefficient for each A-scan and visualizing the spatially distributed attenuation values as an en face image (Fig. 10). Although they quantified only the relative values of attenuation coefficient, the demonstration on malignant human axillary lymph nodes from breast cancer patients () indicated the presence of contrast between malignant and healthy non-neoplastic tissue. Figure 10 shows one such example indicating the differentiation of residual healthy tissue (circled regions) in a malignant lymph node as the low attenuation coefficient regions in Fig. 10(b), which is difficult to identify using the original OCT image in Fig. 10(c). This contrast was attributed to the changes in size and texture of cell nuclei resulting from the neoplastic transformation.86 Their method was further developed and applied by Scolaro et al.17 for imaging the absolute attenuation coefficients in axillary lymph nodes (). They summarized the OCT attenuation coefficients of various tissue subtypes, as included in Table 3, to guide the classification of different tissue types within the lymph node. A strikingly attractive feature of the results of that work is the relative lack of overlap between tissue types and attenuation coefficient values—a fact that would need further testing given the small sample size.
Table 3.
Tissue | Paper | Tissue type | Sample number | Wavelength (nm) | AFR () | Correction | Attenuation () | |
---|---|---|---|---|---|---|---|---|
CPSF | SRF | |||||||
Axillary lymph nodes in breast cancer | Scolaro et al.17 | Paracortex | 4 axillary lymph nodes | 1320 | 200 | Y | N/Aa | 10.0 to 11.5 |
Primary inactive cortical follicles | 4.5 to 6.8 | |||||||
Medullary sinus | 8.1 to 9.1 | |||||||
Fibrous capsule | 14.1 to 15.3 | |||||||
Thickened fibrous capsule | 11.6 to 12.6 | |||||||
Necrotic | 13.0 to 14.5 | |||||||
Dystrophic calcification | 16.0 to 16.5 | |||||||
Ovarian cancer | Yang et al.13,87 | Normal | 51 ovaries | 1310 | NS | Y | N | 13/87 |
Malignant | 13/87 | |||||||
UC | Cauberg et al.18 | Benign | 54 bladder samples from 18 patients | 850 | N/Ab | N/A | 5.75 (median) | |
UC | 5.52, 4.85 and 5.62 (median for grade 1, 2 and 3 UC) | |||||||
Bus et al.3 | Grade 2 UC | 29 lesions | 1310 | N | N | 1.97 (IQR: 1.57 to 2.30) | ||
Grade 3 UC | 13 lesions | 3.52 (IQR: 2.74 to 3.94) | ||||||
Bus et al.88 | Low grade UC | 26 patients | 1310 | N | N | 2.1 (IQR: 1.7 to 2.3) | ||
High grade UC | 3.0 (IQR: 2.9 to 3.7) | |||||||
Freund et al.89 | Low grade UC | 35 patients | 1310 | Y | Y | 3.3 (IQR: 2.7 to 3.7) | ||
High grade UC | 4.9 (IQR: 4.3 to 6.1) | |||||||
Prostate cancer | Muller et al.90,95 | Benign | 20 patients in Ref. 95 | 1310 | 500 | Y | Y | 3.8 (mean)90/4.6 (median)95 |
Malignant | 4.1 (mean)90/5.0 (median)95 | |||||||
Swaan et al.96 | 9 subtypes | 1 patient | 1310 | 320 | Y | Y | 4.0 to 7.0 (mean) | |
Brain cancer | Kut et al. for white matter analysis92 | Noncancer white matter of seizure patients | 16 patients in the training group | 1310 | NS | Y | Yc | |
Infiltrated zone | for low-grade (LG) | |||||||
for high-grade (HG) | ||||||||
Cancer core | for LG | |||||||
for HG | ||||||||
Kut et al. for gray matter analysis92 | Noncancer gray matter of seizure patients | 32 patients in the training and validation group | ||||||
Infiltrated zone | for LG | |||||||
for HG | ||||||||
Cancer core | for LG | |||||||
for HG | ||||||||
Almasian et al.93 | Cortical tissue | 5 patients | 1300 | 200 | Y | Y | (normal) versus (glioma) | |
Subcortical tissue | 3 patients | (normal) versus (glioma) | ||||||
Yashin et al.94 | Normal white matter | 30 patients | 1300 | NS | N | N | 8.5 (IQR: 8.2 to 9.3) | |
Normal cortex | 5.0 (IQR: 3.2 to 5.5) | |||||||
Astrocytoma grade I to III | 3.0 (IQR: 2.6 to 3.5) | |||||||
Glioblastoma grade IV without necrotic areas | 3.2 (IQR: 2.6 to 4.2) | |||||||
Glioblastoma grade IV with necrotic areas | 6.3 (IQR: 5.4 to 6.8) | |||||||
Necrosis | 7.5 (IQR: 5.3 to 7.7) | |||||||
Kidney cancer | Barwari et al.97,98 | Normal | 14 patients97/16 cases98 | 1300 | NS | Y | Y | 4.9597/5.098 (median) |
Renal cell carcinoma | 8.8697/8.298 (median) | |||||||
Wagstaff et al.99 | Oncocytoma | 40 patients | 1310 | NS | Y | Y | 3.4 (median) | |
Renal cell carcinoma | 4.4/4.8 (median) | |||||||
Buijs et al.91 | Benign | 95 patients | NS | NS | Y | Y | 3.2 (IQR: 2.7 to 4.4) | |
Renal cell carcinoma | 4.3 (IQR: 3.7 to 5.0) | |||||||
Skin cancer | Wessels et al.14 | Benign lesions | 33 patients | 1300 | NS | Y | Y | |
Melanoma | ||||||||
Wessels et al.15 | Healthy skin | 20 lesions of 16 patients | 1300 | NS | Y | Y | ||
Vulvar intraepithelial neoplasia |
Note: Papers highlighted in bold present parametric attenuation coefficient imaging. AFR, axial fitting range; CPSF, confocal point spread function; IQR, interquartile range; N/A, not applicable; NS, not specified; SRF, sensitivity roll-off function.
The depth scan response in the time-domain OCT scanner was corrected.
Dynamic focusing was used.
Sensitivity fall-off was corrected together with the confocal function using the phantom signal.
OCT attenuation has also been used to characterize ovarian cancer, which is difficult to diagnose at an early stage due to the lack of symptoms, resulting in the lowest survival rate of the gynecologic cancers. Yang et al.13 applied OCT attenuation to ovaries () ex vivo, showing lower attenuation values in malignant tissue (: ) than in normal tissue (: ). In a subsequent study, they demonstrated consistent contrast between the malignant (: ) and normal tissue (: ) in ovaries (normal: ; malignant: ),87 and further augmented the attenuation with measurement of the cumulative phase retardation caused by the birefringence of collagen tissue. The combination of these two parameters shows high sensitivity and specificity for the classification of malignant and normal ovary tissue. They further explained the influence of the measured collagen area fraction lower in the malignant than in the normal tissue on the contribution of the collagen tissue to the two quantified optical properties.
Analysis of urothelial carcinoma (UC) by OCT attenuation has also been investigated. Cauberg et al.18 measured OCT attenuation in human bladder samples () to assist grading of UC tissue ex vivo. They reported the attenuation coefficients (overspecified to two decimal places) for different tissues, including benign tissue (median : ); and grade 1 (median : ), 2 (median : ), and 3 (median : ) UC at 850-nm wavelength. Bus et al.3 extended this analysis to patients () in vivo and reported the higher attenuation in grade 3 (median : ) than 2 (median : ) lesions. A follow-on study on a large number of patients () by Bus et al. further validated the higher attenuation of high-grade lesions (median : ) than low-grade lesions (median : ), demonstrating the feasibility of OCT attenuation for grading low- and high-grade lesions.88 A recent study on 35 patients by Freund et al.89 demonstrated a consistent contrast in OCT attenuation, as summarized in Table 3.
OCT attenuation has also been applied to investigate other types of cancer. For example, Muller et al.90 used OCT attenuation to aid in the characterization of prostate cancer, reporting attenuation coefficients of benign (mean : ; AFR: ) and malignant (mean : ; AFR: ) tissue. They noted that not all tissue with high attenuation coefficient corresponded to cancer. Buijs et al.91 explored the use of OCT attenuation to assist the differentiation of renal cell carcinoma (median : ), respectively, versus benign renal masses (median : ) and versus oncocytomas (median : ), based on 95 patients. The results showed the improved diagnostic yield aided by OCT attenuation.91 Kut et al.92 investigated the OCT attenuation of cancerous and noncancerous brain tissue from human patients () and reported lower attenuation coefficients in cancerous tissue (infiltrated zone mean : 3.5 and , cancer core mean : 3.9 and , respectively, for high-grade and low-grade) than in noncancerous white matter tissue (mean : ). They attributed this contrast to the invading cancer cells, which break down and decrease the expression of myelin in white matter. Similar contrast was recently reported by Almasian et al.93 from an in vivo study, as summarized in Table 3. A recent study on ex vivo human brain tissue by Yashin et al.94 reported consistently lower attenuation coefficients of the tumorous tissue than the normal tissue. In addition, they observed a significant influence of tumor necrosis on the measured attenuation coefficients. Wessels et al.15 applied OCT attenuation analysis to vulvar intraepithelial neoplasia (VIN), which can progress to vulvar squamous cell carcinoma. The results showed higher attenuation coefficients in VIN (: ) than in healthy skin (: ). They also investigated cutaneous melanoma and reported lower attenuation in melanomas (mean : ) than in benign lesions (mean : ).14 The results in these various pilot studies indicate the general promise of OCT attenuation as a biomarker to characterize cancer.
4.4. Other Tissues
Building on from the wide application of OCT to ophthalmology, OCT attenuation analysis has been explored to investigate eye diseases in vivo, such as glaucoma. The OCT attenuation in the retinal nerve fiber layer (RNFL) of healthy ( with an RNFL thickness to ) and glaucomatous subjects () has been analyzed by van der Schoot et al.,100 showing decreasing values with severity in glaucoma (overspecified to 2 decimal places): (mild glaucoma : ; moderate glaucoma : ; and advanced glaucoma : ), as compared to normal subjects (: ). Consistent contrast was later presented by Vermeer et al. in a study on healthy () and glaucomatous () eyes.101 They explained this contrast as due to the decreased density of nerve fibers in glaucoma. Additionally, the OCT attenuation coefficients of the multiple tissue layers (including the RNFL) in the retina have been extracted by DeBuc et al.102 and Sun et al.103 to assess other diseases that cause changes in the retina, including diabetes and pituitary adenoma. However, despite the promise, larger sample sizes are needed to establish the feasibility of OCT attenuation for assessing these diseases.
In additional, OCT attenuation has been applied to the characterization of various other tissue pathologies, such as parametric imaging of dystrophic muscle tissue, to identify necrotic lesions in mouse models of muscular dystrophy (necrotic lesion : and necrotic myofiber : versus healthy tissue : ; AFR: ),104 and measurement of cartilage tissue to quantify differences between the healthy cartilage (: ), repaired tissue (: ), and bone (: ) in goats with induced osteochondral defects.105 All of these studies on OCT attenuation, both at the level of initial demonstration and relatively large-scale clinical data sets, have shown good potential for improved quantitative tissue characterization as compared to the use of only the qualitative OCT images.
5. Discussion
5.1. Measurement Variation, Accuracy, and Precision
The use of OCT attenuation for tissue characterization and differentiation is gradually expanding, and promising examples of contrast between normal and diseased tissue have been shown.9,13–19 However, there are overall large variations in the attenuation values of the same tissue types across studies, as summarized in Sec. 4. There are general issues with OCT attenuation measurement, making it challenging to fully understand the origins of such large variations. These issues include the lack of clarity of the instrument configuration, data processing method, depth range for attenuation calculation, accuracy, and precision (e.g., attenuation coefficients presented with too many significant figures), and inconsistency in how the values are reported (median versus mean versus value range). Therefore, we urge authors of future studies to clearly specify the details of the implementation of OCT attenuation calculations to provide improved clarity and consistency, including at least the following.
-
1.
Instrument and measurement configuration: OCT scanner type, wavelength, imaging resolutions (axial, including assumptions on refractive index, and lateral), sampling density, use of polarization diversity detection, and contact/noncontact scanning mode.
-
2.
Data processing key parameter and method: OCT model, preprocessing (e.g., averaging and tissue surface detection), correction for CPSF and sensitivity roll-off, axial range for fitting/calculation, fitting/calculation method and assessment of fit quality, masking of vessels for in vivo scans and processing time.
-
3.
Sample handling and results presentation: provide assessment of measurement accuracy and precision, report the attenuation coefficient range, mean, median, and variation, and specify the number of samples and measurements within samples, tissue locations, and tissue processing if any (e.g., time from harvesting, freezing, optical clearing and fixing/histological tissue processing).
Reporting the above will improve the comparability, and ultimately reproducibility, of results across laboratories and enable understanding of the current variations as well as point to solutions.
The accuracy and precision of OCT attenuation measurement have not been comprehensively investigated in most studies, which in part have contributed to the large variations. To date, the most practical approach to assess the accuracy and precision is using a homogeneous imaging phantom with well controlled and known optical properties, such as polystyrene microsphere or silica bead solutions. The theoretical attenuation coefficients are estimated using a scattering model, such as Mie theory, for a set of phantoms with varying concentrations (or even sizes) of scatterers and, thus, varying attenuations. The measured OCT attenuation of the phantoms can then be compared to the theoretical values, building a calibration curve for estimating the accuracy and precision, as performed by Almasian et al.28
One issue with this approach is the reduced accuracy when the concentrations of the scatterers are sufficiently high,28 for appreciable “multiparticle scattering” (i.e., interferences between the densely distributed scatterers) to occur.106 To mitigate this, the estimation of the theoretical attenuation coefficient with discrete particle models must be augmented to take into account such effects. In addition, the approach involves the preparation of multiple solutions of scatterers, which is tedious but feasible. A solid phantom with structured attenuation (e.g., an array of thin pillars filled with medium with varying attenuations) is highly desirable and can be feasible based upon progress in imaging phantom fabrication achieved to date.107,108 Such a phantom could then be replicated and be readily applied in multiple studies for multi-laboratory validation, which would provide an important assessment of measurement accuracy and precision and help understand and minimize the large variations that currently exist. In addition, it is also possible to assess the accuracy and precision by comparing OCT attenuation to other methods for measuring tissue optical properties, such as measurement of light transmittance through the sample,109 but this approach has not been explored so far.
5.2. Tissue Heterogeneity
Biological tissue typically presents heterogeneity along both the axial and lateral directions in the OCT imaging volume. The lateral heterogeneity in tissue is less problematic than the axial heterogeneity, and in fact favorable when parametric imaging of the tissue attenuation is required. The axial heterogeneity complicates OCT attenuation measurement in particular as one crucial assumption in the OCT models is homogeneity over the depth range used in the calculation.
Image segmentation, thus, forms an important part of an automated workflow for OCT attenuation analysis, so as to restrict the depth range for calculation to relatively homogeneous tissue regions. The first step in such segmentation is detecting the tissue surface, which can avoid artificial nonphysical negative attenuation resulting from the inclusion of noise signal above the tissue surface, as highlighted by Yuan et al.36 There are multiple methods available for surface detection, mainly using the markedly strong reflectance and correspondingly high OCT signal at the tissue surface. These methods include the use of the local maximum OCT signal intensity, local maximum gradient of the OCT signal, and the Canny edge detector.70,110–112 The underlying tissue may present different morphologies and need further segmentation, especially when the tissue presents layered structures with varying OCT signal strength. For example, normal skin comprises epidermis (low signal) and dermis (high signal), and normal coronary arterial wall comprises intima (high signal), media (low signal), and adventitia (high signal), which are further segmented to confine the depth ranges for attenuation measurement.112,113 Overall, the capacity to locate homogeneous tissue regions for attenuation calculation is dependent on the specific tissue morphology and the corresponding contrast in OCT signal and may need additional revision of the methods under specific disease conditions. Such revisions will be disease- and tissue-dependent and may not be feasible for all conditions.
The impact of axial tissue heterogeneity can also be mitigated by data processing methods in the single-scattering model, using the depth-resolved method or an adaptive window fitting approach. The depth-resolved method calculates the attenuation coefficient for each tissue depth (local attenuation coefficient) and does not require tissue homogeneity on the scale (100 to ) required by the fitting method.38 However, as it assumes the full attenuation of light in each A-scan, the obtained attenuation coefficients are sensitive to the estimation of the noise level and, thereby, likely to be less reliable in cases where contributions from multiple scattering are significant. Additionally, the correction of system-dependent functions (i.e., CPSF and sensitivity roll-off) and noise in this approach have not yet been fully described.41 As well, it is not yet clear how to assess the accuracy of the volumetric attenuation coefficients obtained using this method. Further research is still needed to address these issues. On the other hand, adaptive window fitting extends the model fitting to variable depth ranges in each A-scan, by tuning the length of the fitting window from a fixed start depth or the depth of the window with fixed length, to generate parametric volumes.16,17 In these implementations, the goodness of fit is calculated for each fitting and used to select the optimal fitting range and the resulting attenuation coefficient. One disadvantage is the significantly longer computation time due to the increased number of fits performed. Care should also be taken to validate if the optimal fitting leads to a physically reasonable attenuation coefficient. Apparently good fitting may sometimes lead to an artificial nonphysical negative attenuation coefficient when the fitting extends from a locally low signal region to a deeper region with high signal.
Speckle averaging provides an important method to mitigate the impact of the local heterogeneity and the inherent speckles on attenuation measurement. Even in homogeneous samples, the presence of OCT speckles requires the use of averaging in the axial and/or lateral directions to provide reliable attenuation estimation. Although speckle averaging/reduction is an active field of research,114 there is a need for further study to assess the impacts of the methods and degree of averaging on the estimated attenuation coefficients and to suggest optimal averaging.
One ubiquitous source of tissue heterogeneity in living tissue is the microvascular network, comprising blood and lymphatic vessels.115 Each type of vessel presents very different scattering properties to those of the surrounding tissue, creating local heterogeneity in the OCT signal that has rarely been taken into account. The blood vessels present very high levels of scattering, which at the OCT wavelengths is strongly forward directed due to the large, high-contrast scatterers (mainly red blood cells).116 This contrast leads to lower OCT signals in vessel regions than in the surrounding tissue and artifacts in the estimated attenuation coefficients when the calculation window covers the vessel pixels, as demonstrated by Gong et al.35 The lymphatic vessels have been observed first by Vakoc et al.115 to present even lower signals than the blood vessels, almost approaching the OCT noise floor, due to the transparency (i.e., absence of scatterers) of the lymph.117–119 This transparency, which has also been observed in nerve fibers,120 can lead to similar artifacts in attenuation analysis. One approach to eliminate such artifacts is segmenting the vessels with OCT angiography and/or lymphangiography, and masking them to restrict the attenuation analysis to A-scans without vessels.35 In addition, such implementation can also provide a more comprehensive tissue characterization, namely using OCT attenuation and vascular imaging to assess the avascular tissue components and the microvascular network, respectively.
5.3. Other Factors Affecting Measurement
Multiple additional factors can impact the measurement of OCT attenuation, including the pressure induced by contact scanning, tissue birefringence, and the use of optical clearing agents. Contact scanning mode is used either intentionally, such as for skin imaging to mitigate motion artifact, or unintentionally in intravascular imaging due to the uncontrolled positioning of the imaging catheter inside the vessels. It is well known that compression of a sample induces more scattering. This phenomenon is largely the simple consequence of increasing the gradient of the refractive index by reducing the axial dimensions between scatterers. This pressure-enhanced scattering is captured by the OCT signal and can then alter the measured attenuation, but its quantitative effect on the OCT attenuation coefficient has not been studied. Interestingly, Kholodnykh et al.51 reported approximately twice the OCT attenuation value of that measured by Schmitt et al.1 from human forearm skin at the same OCT wavelength (1300 nm) and attributed this difference, in part, to the pressure resulting from the contacting probe. As a comparison, the pressure-induced changes to the reduced scattering coefficient have been extensively studied in fiber-probe-based diffuse reflectance spectroscopy. For example, Reif et al.121 reported an increase of the reduced scattering coefficient at 700 nm with the increasing pressure, which was attributed to the increased density of the scatterers, although there are also inconsistent results in the field.122 Quantification of the impacts of pressure on OCT attenuation is still needed, and the use of contact scanning needs to be clarified in future studies.
Many tissues are birefringent due to the presence of long thin fibrous structures, such as the abundant collagen fibers in dermal skin with locally or globally unidirectional arrangement. The interactions of birefringent tissue with OCT light leads not only to attenuation but also to variation in the polarization state of light with tissue depth.123 An attenuation measurement of a birefringent sample with a conventional OCT system can be problematic, as the detected OCT reflectance signal strength depends not only on the tissue attenuation but also on the polarization state of the incident light, the OCT components that can alter the light polarization, and the birefringence of the tissue sample. For example, the logarithmic OCT structural B-scans of birefringent samples can show a banding-like pattern versus depth in tissue, which modulates the exponential decay expected in the single-scattering model for homogeneous tissue regions. Such dependence of the OCT signal on the tissue birefringence will then lead to inaccuracy of the estimated attenuation coefficients. Simultaneous detection of the OCT signal in two orthogonal polarization channels can eliminate such polarization artifacts.
Optical clearing is a widely studied method of introducing an agent to make tissue more transparent to allow greater light penetration and provide consequently deeper imaging.124 The scattering in tissue originates from gradients caused by mismatches in the refractive index of scatterers. The main contributors to the gradients, as modeled by Schmitt and Kumar,125 include tissue fibers (bundles of elastin and collagen), cytoplasmic organelles (e.g., mitochondria), and cell nuclei, in contrast to the cytoplasm and interstitial fluid with lower refractive index. Optical clearing agents are thought to penetrate into extracellular spaces and reduce the mismatch in refractive index. This then leads to reduced scattering (i.e., elevated tissue transparency) and enhanced imaging depth in tissue.124 As a result, optical clearing has been shown to reduce attenuation coefficients in the OCT signal. For example, Deng et al.126 investigated OCT attenuation of rat skin in vivo following the application of polyethylene glycol with a penetration enhancer. They reported a decrease of the attenuation from 7.0 to at 120 min after the application of glycerol. Genina et al.127 reported a decrease of OCT attenuation by values in the range 16% to 32% for different optical clearing agents applied to rat dermis. Measurement of the OCT attenuation provides a method to assess the optical clearing effects.126,127 Notwithstanding its long gestation, further work is needed to understand the utility of optical clearing in practical applications.
5.4. Complementary Optical Properties
To enhance the contrast for tissue characterization and differentiation, additional optical properties can be obtained from the OCT signal to supplement attenuation, such as the backscattering coefficient () (or local reflectance used by Levitz et al.54). The backscattering coefficient of the sample, detected within the NA of the OCT system, has been extracted from the OCT amplitude after correcting for system parameters.8,28,54,128–131 Xu et al.8 and Liu et al.,40 respectively, added the backscattering coefficient and backscatter term (linearly related to the logarithm of the backscatter coefficient) to the attenuation coefficient, providing an approach to further differentiate atherosclerotic tissue components with similar attenuation coefficients.
The simultaneous measurement of attenuation and backscattering coefficients also allows the extraction of further parameters, including the anisotropy and the size of the scatterers. Kodach et al.128 calculated the ratio of backscattering coefficient to the total scattering coefficient (extracted from the OCT signal) as the phase function integrated over the NA (). They then built two calibration functions, including versus particle diameter and anisotropy versus particle diameter, aided by Mie theory. The OCT-estimated of an Intralipid sample was input into the versus particle diameter function to decide the scatterer size, which was further input into the anisotropy versus particle diameter function to decide the anisotropy. A similar approach has been used by Schneider et al.129 for measuring the size of dispersed polystyrene nanoparticles. Levitz et al.54,130 proposed the simultaneous calculation of attenuation and local reflectance, which were then fed into the calibration grid in the attenuation–local reflectance map to extract the anisotropy of developing collagen gels. To our knowledge, these methods for estimating the scatterer anisotropy and size have not yet been demonstrated on biological samples.
As described above, PS-OCT detects the polarization states of the reflected OCT light, aided by polarization diversity detection.123 Estimation of the birefringence and related polarization parameters (e.g., degree of polarization uniformity and optic axis orientation) represents an interesting alternative form of parametric imaging both with versions that integrate over similar axial regions as OCT attenuation imaging72,132 and local versions.133,134 Finally, retrieval of diattenuation—the polarization state-dependent differential attenuation—is also possible via PS-OCT but to the authors’ knowledge is thought to be a small effect and has not yet been widely investigated.135,136 Also based on polarization detection, Yashin et al.94 recently used cross-polarization OCT to simultaneously measure the attenuation coefficients of the co- and cross-polarized detected light. Demonstrations on human and rat brain tissues have indicated the potential for differentiation of cancer and normal tissue.94,137
We finally observe that, as well as optical properties, parametric OCT imaging can also be used to observe mechanical properties of tissue.138,139 All such properties, optical and otherwise, show great potential to be combined with OCT attenuation imaging to provide a more comprehensive assessment of tissues.
6. Conclusion
For more than 25 years, OCT has been studied and used as a tool for characterizing morphology on the 1- to resolution scale. At the same time, it is widely accepted that submicrometer microscopic changes in tissue structure and organization due to disease progression causes altered tissue optical properties, which can possibly be probed by the OCT attenuation coefficient. Multiple models have been advanced to obtain the attenuation coefficient, ranging in sophistication, but by far the most commonly used model is the single-scattering model, which is used in almost all studies on clinically relevant tissues reported in this review. Our overview of these studies highlights the generally small sample sizes both on ex vivo and in vivo samples. The reported values of the OCT attenuation coefficient suggest that, although most pathologies show a change in , the difference between normal and diseased tissue is not always significant. In some studies, relative values alone are sufficient, whereas other studies show the effectiveness of combining with other OCT-derived parameters in differentiating healthy and diseased tissues. Our overview also highlights the wide spread in reported values, which results from the use of different systems, methodologies, and sample preparation, as well as on occasions a lack of rigor in approach. Thus, whilst we remain optimistic overall, efforts toward standardization on a rigorous methodology in future research are crucial to advancing this field.
Biographies
Peijun Gong is a research fellow at the Harry Perkins Institute of Medical Research and The University of Western Australia in Australia, where he received his PhD in 2016. His research interests are in technical development and clinical translation of biomedical imaging techniques based on optical coherence tomography (OCT). These include OCT angiography, OCT lymphangiography and parametric OCT imaging of tissue optical (e.g., attenuation coefficient and birefringence) and mechanical properties.
Mitra Almasian is a postdoctoral researcher at both the Biomedical Engineering and Physics Department at the Amsterdam UMC and the Rijksmuseum. Her research focuses on structural and functional imaging, using optical coherence tomography (OCT). She graduated in 2018 at the University of Amsterdam with a PhD thesis on quantitative signal analysis and clinical application of OCT. She has a background in (photo-) chemistry and is interested in optical imaging techniques to probe static and dynamic material properties.
Gijs van Soest is an associate professor at the Erasmus MC University Medical Center Rotterdam, The Netherlands, He leads the Invasive Imaging Research Group, part of the Thorax Center, Department of Biomedical Engineering. His research encompasses catheter-based imaging with light and/or ultrasound, focusing on development of new instruments and new forms of image contrast. He was trained as an experimental physicist (MSc 1997, University of Groningen; PhD 2001, University of Amsterdam) and worked in atmospheric remote sensing (Royal Netherlands Meteorology Institute) prior to joining Erasmus MC in 2005.
Daniel M. de Bruin: Biography is not available.
Ton G. van Leeuwen is a full professor in biomedical physics and since 2008 appointed as a head of the Biomedical Engineering and Physics Department at the Amsterdam UMC, Academic Medical Center of the University of Amsterdam. Current research focuses on the physics of the interaction of light with tissue, and use of that knowledge for the development, introduction, and clinical evaluation of (newly developed) optical imaging techniques for gathering quantitative functional and molecular information of tissue.
David D. Sampson is currently Vice-Provost, Research and Innovation, at the University of Surrey, where he also heads a research group, Surrey Biophotonics. His research interests have spanned a wide range of topics from theoretical to translational biophotonics, with a strong emphasis on optical coherence tomography (OCT). He has held a long-term interest in various forms of parametric imaging, such as the present topic—attenuation, as well as elastography and polarisation-sensitive OCT. He is an SPIE fellow, OSA fellow, IEEE fellow, and an ex-elected member and current adviser to the SPIE Board of Directors.
Dirk J. Faber received his MSc degree in applied physics from the University of Twente, Enschede, The Netherlands, in 1999, and his PhD degree from the University of Amsterdam, Amsterdam, The Netherlands, in 2005, based on his work on optical coherence tomography. He is currently an assistant professor with Department of Biomedical Engineering and Physics, at the Amsterdam University Medical Centers, Academic Medical Center. He has co-authored over 75 peer-reviewed articles and six book chapters. His current research focuses on the physics of light-tissue interaction and the development of optical coherence tomography and single fiber spectroscopy. He is a senior member of SPIE.
Disclosures
The authors declare that they have no relevant financial interests in this article and no potential conflicts of interest.
Contributor Information
Peijun Gong, Email: peijun.gong@uwa.edu.au.
Mitra Almasian, Email: m.almasian@amc.uva.nl.
Gijs van Soest, Email: g.vansoest@erasmusmc.nl.
Daniel M. de Bruin, Email: d.m.debruin@amc.nl.
Ton G. van Leeuwen, Email: T.G.vanLeeuwen@amc.uva.nl.
David D. Sampson, Email: d.sampson@surrey.ac.uk.
Dirk J. Faber, Email: d.j.faber@amc.uva.nl.
References
- 1.Schmitt J. M., Knüttel A., Bonner R. F., “Measurement of optical properties of biological tissues by low-coherence reflectometry,” Appl. Opt. 32(30), 6032–6042 (1993). 10.1364/AO.32.006032 [DOI] [PubMed] [Google Scholar]
- 2.Liu L., et al. , “Imaging the subcellular structure of human coronary atherosclerosis using micro-optical coherence tomography,” Nat. Med. 17(8), 1010–1014 (2011). 10.1038/nm.2409 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 3.Bus M. T. J., et al. , “Volumetric in vivo visualization of upper urinary tract tumors using optical coherence tomography: a pilot study,” J. Urol. 190(6), 2236–2242 (2013). 10.1016/j.juro.2013.08.006 [DOI] [PubMed] [Google Scholar]
- 4.Backman V., et al. , “Detection of preinvasive cancer cells,” Nature 406(6791), 35–36 (2000). 10.1038/35017638 [DOI] [PubMed] [Google Scholar]
- 5.van der Meer F. J., et al. , “Apoptosis- and necrosis-induced changes in light attenuation measured by optical coherence tomography,” Lasers Med. Sci. 25(2), 259–267 (2010). 10.1007/s10103-009-0723-y [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6.Schmitt J. M., et al. , “Optical-coherence tomography of a dense tissue: statistics of attenuation and backscattering,” Phys. Med. Biol. 39(10), 1705–1720 (1994). 10.1088/0031-9155/39/10/013 [DOI] [PubMed] [Google Scholar]
- 7.van der Meer F. J., et al. , “Quantitative optical coherence tomography of arterial wall components,” Lasers Med. Sci. 20(1), 45–51 (2005). 10.1007/s10103-005-0336-z [DOI] [PubMed] [Google Scholar]
- 8.Xu C., et al. , “Characterization of atherosclerosis plaques by measuring both backscattering and attenuation coefficients in optical coherence tomography,” J. Biomed. Opt. 13(3), 034003 (2008). 10.1117/1.2927464 [DOI] [PubMed] [Google Scholar]
- 9.McLaughlin R. A., et al. , “Parametric imaging of cancer with optical coherence tomography,” J. Biomed. Opt. 15(4), 046029 (2010). 10.1117/1.3479931 [DOI] [PubMed] [Google Scholar]
- 10.Chang S., Bowden A. K., “Review of methods and applications of attenuation coefficient measurements with optical coherence tomography,” J. Biomed. Opt. 24(9), 090901 (2019). 10.1117/1.JBO.24.9.090901 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Bosschaart N., et al. , “Spectroscopic low coherence interferometry,” in Optical Coherence Tomography: Technology and Applications, Drexler W., Fujimoto J. G., Eds., pp. 1163–1187, Springer International Publishing, Cham: (2015). [Google Scholar]
- 12.Wax A., Giacomelli M., Robles F., “Elastic scattering spectroscopy and optical coherence tomography,” in Optical Coherence Tomography: Technology and Applications, Drexler W., Fujimoto J. G., Eds., pp. 1207–1235, Springer International Publishing, Cham: (2015). [Google Scholar]
- 13.Yang Y., et al. , “Optical scattering coefficient estimated by optical coherence tomography correlates with collagen content in ovarian tissue,” J. Biomed. Opt. 16(9), 090504 (2011). 10.1117/1.3625247 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 14.Wessels R., et al. , “Functional optical coherence tomography of pigmented lesions,” J. Eur. Acad. Dermatol. Venereol. 29(4), 738–744 (2015). 10.1111/jdv.12673 [DOI] [PubMed] [Google Scholar]
- 15.Wessels R., et al. , “Optical coherence tomography in vulvar intraepithelial neoplasia,” J. Biomed. Opt. 17(11), 116022 (2012). 10.1117/1.JBO.17.11.116022 [DOI] [PubMed] [Google Scholar]
- 16.van Soest G., et al. , “Atherosclerotic tissue characterization in vivo by optical coherence tomography attenuation imaging,” J. Biomed. Opt. 15(1), 011105 (2010). 10.1117/1.3280271 [DOI] [PubMed] [Google Scholar]
- 17.Scolaro L., et al. , “Parametric imaging of the local attenuation coefficient in human axillary lymph nodes assessed using optical coherence tomography,” Biomed. Opt. Express 3(2), 366–379 (2012). 10.1364/BOE.3.000366 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 18.Cauberg E. C. C., et al. , “Quantitative measurement of attenuation coefficients of bladder biopsies using optical coherence tomography for grading urothelial carcinoma of the bladder,” J. Biomed. Opt. 15(6), 066013 (2010). 10.1117/1.3512206 [DOI] [PubMed] [Google Scholar]
- 19.Xie T. Q., Zeidel M. L., Pan Y. T., “Detection of tumorigenesis in urinary bladder with optical coherence tomography: optical characterization of morphological changes,” Opt. Express 10(24), 1431–1443 (2002). 10.1364/OE.10.001431 [DOI] [PubMed] [Google Scholar]
- 20.Troy T. L., Thennadil S. N., “Optical properties of human skin in the near infrared wavelength range of 1000 to 2200 nm,” J. Biomed. Opt. 6(2), 167–176 (2001). 10.1117/1.1344191 [DOI] [PubMed] [Google Scholar]
- 21.Qu J., et al. , “Optical properties of normal and carcinomatous bronchial tissue,” Appl. Opt. 33(31), 7397–7405 (1994). 10.1364/AO.33.007397 [DOI] [PubMed] [Google Scholar]
- 22.Shu X., Beckmann L., Zhang H. F., “Visible-light optical coherence tomography: a review,” J. Biomed. Opt. 22(12), 121707 (2017). 10.1117/1.JBO.22.12.121707 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 23.Schmitt J. M., Xiang S. H., Yung K. M., “Differential absorption imaging with optical coherence tomography,” J. Opt. Soc. Am. A 15(9), 2288–2296 (1998). 10.1364/JOSAA.15.002288 [DOI] [Google Scholar]
- 24.Yi J., et al. , “Visible-light optical coherence tomography for retinal oximetry,” Opt. Lett. 38(11), 1796–1798 (2013). 10.1364/OL.38.001796 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 25.Bosschaart N., et al. , “In vivo low-coherence spectroscopic measurements of local hemoglobin absorption spectra in human skin,” J. Biomed. Opt. 16(10), 100504 (2011). 10.1117/1.3644497 [DOI] [PubMed] [Google Scholar]
- 26.Yi J., Backman V., “Imaging a full set of optical scattering properties of biological tissue by inverse spectroscopic optical coherence tomography,” Opt. Lett. 37(21), 4443–4445 (2012). 10.1364/OL.37.004443 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 27.Sampson D. D., Hillman T. R., “Optical coherence tomography,” in Lasers and Current Optical Techniques in Biology, G. Palumbo and R. Pratesi, Eds., pp. 481–571, Royal Society of Chemistry, Cambridge, United Kingdom: (2004). [Google Scholar]
- 28.Almasian M., et al. , “Validation of quantitative attenuation and backscattering coefficient measurements by optical coherence tomography in the concentration-dependent and multiple scattering regime,” J. Biomed. Opt. 20(12), 121314 (2015). 10.1117/1.JBO.20.12.121314 [DOI] [PubMed] [Google Scholar]
- 29.van Leeuwen T. G., Faber D. J., Aalders M. C., “Measurement of the axial point spread function in scattering media using single-mode fiber-based optical coherence tomography,” IEEE J. Sel. Top. Quantum Electron. 9(2), 227–233 (2003). 10.1109/JSTQE.2003.813299 [DOI] [Google Scholar]
- 30.Faber D. J., et al. , “Quantitative measurement of attenuation coefficients of weakly scattering media using optical coherence tomography,” Opt. Express 12(19), 4353–4365 (2004). 10.1364/OPEX.12.004353 [DOI] [PubMed] [Google Scholar]
- 31.Leitgeb R., Hitzenberger C. K., Fercher A. F., “Performance of Fourier domain vs. time domain optical coherence tomography,” Opt. Express 11(8), 889–894 (2003). 10.1364/OE.11.000889 [DOI] [PubMed] [Google Scholar]
- 32.Nassif N. A., et al. , “In vivo high-resolution video-rate spectral-domain optical coherence tomography of the human retina and optic nerve,” Opt. Express 12(3), 367–376 (2004). 10.1364/OPEX.12.000367 [DOI] [PubMed] [Google Scholar]
- 33.Yun S. H., et al. , “High-speed spectral-domain optical coherence tomography at wavelength,” Opt. Express 11(26), 3598–3604 (2003). 10.1364/OE.11.003598 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34.Arnaud J. A., et al. , “Technique for fast measurement of Gaussian laser beam parameters,” Appl. Opt. 10(12), 2775–2776 (1971). 10.1364/AO.10.002775 [DOI] [PubMed] [Google Scholar]
- 35.Gong P., et al. , “Assessment of human burn scars with optical coherence tomography by imaging the attenuation coefficient of tissue after vascular masking,” J. Biomed. Opt. 19(2), 021111 (2014). 10.1117/1.JBO.19.2.021111 [DOI] [PubMed] [Google Scholar]
- 36.Yuan W., et al. , “Robust and fast characterization of OCT-based optical attenuation using a novel frequency-domain algorithm for brain cancer detection,” Sci. Rep. 7, 44909 (2017). 10.1038/srep44909 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37.Kennedy B. F., et al. , “Optical coherence micro-elastography: mechanical-contrast imaging of tissue microstructure,” Biomed. Opt. Express 5(7), 2113–2124 (2014). 10.1364/BOE.5.002113 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 38.Vermeer K. A., et al. , “Depth-resolved model-based reconstruction of attenuation coefficients in optical coherence tomography,” Biomed. Opt. Express 5(1), 322–337 (2014). 10.1364/BOE.5.000322 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 39.Hughes D. I., Duck F. A., “Automatic attenuation compensation for ultrasonic imaging,” Ultrasound Med. Biol. 23(5), 651–664 (1997). 10.1016/S0301-5629(97)00002-1 [DOI] [PubMed] [Google Scholar]
- 40.Liu S., et al. , “Tissue characterization with depth-resolved attenuation coefficient and backscatter term in intravascular optical coherence tomography images,” J. Biomed. Opt. 22(9), 096004 (2017). 10.1117/1.JBO.22.9.096004 [DOI] [PubMed] [Google Scholar]
- 41.Smith G. T., et al. , “Automated, depth-resolved estimation of the attenuation coefficient from optical coherence tomography data,” IEEE Trans. Med. Imaging 34(12), 2592–2602 (2015). 10.1109/TMI.2015.2450197 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 42.Liu J., et al. , “Optimized depth-resolved estimation to measure optical attenuation coefficients from optical coherence tomography and its application in cerebral damage determination,” J. Biomed. Opt. 24(3), 035002 (2019). 10.1117/1.JBO.24.3.035002 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 43.Karamata B., et al. , “Multiple scattering in optical coherence tomography. I. Investigation and modeling,” J. Opt. Soc. Am. A 22(7), 1369–1379 (2005). 10.1364/JOSAA.22.001369 [DOI] [PubMed] [Google Scholar]
- 44.Karamata B., et al. , “Multiple scattering in optical coherence tomography. II. Experimental and theoretical investigation of cross talk in wide-field optical coherence tomography,” J. Opt. Soc. Am. A 22(7), 1380–1388 (2005). 10.1364/JOSAA.22.001380 [DOI] [PubMed] [Google Scholar]
- 45.Schmitt J. M., Knüttel A., “Model of optical coherence tomography of heterogeneous tissue,” J. Opt. Soc. Am. A 14(6), 1231–1242 (1997). 10.1364/JOSAA.14.001231 [DOI] [Google Scholar]
- 46.Smithies D. J., et al. , “Signal attenuation and localization in optical coherence tomography studied by Monte Carlo simulation,” Phys. Med. Biol. 43(10), 3025–3044 (1998). 10.1088/0031-9155/43/10/024 [DOI] [PubMed] [Google Scholar]
- 47.Faber D. J., et al. , “Toward assessment of blood oxygen saturation by spectroscopic optical coherence tomography,” Opt. Lett. 30(9), 1015–1017 (2005). 10.1364/OL.30.001015 [DOI] [PubMed] [Google Scholar]
- 48.Jansen S. M., et al. , “Applicability of quantitative optical imaging techniques for intraoperative perfusion diagnostics: a comparison of laser speckle contrast imaging, sidestream dark-field microscopy, and optical coherence tomography,” J. Biomed. Opt. 22(8), 086004 (2017). 10.1117/1.JBO.22.8.086004 [DOI] [PubMed] [Google Scholar]
- 49.Jansen S. M., et al. , “Feasibility of optical coherence tomography (OCT) for intra-operative detection of blood flow during gastric tube reconstruction,” Sensors 18(5), 1331 (2018). 10.3390/s18051331 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 50.Yadlowsky M. J., Schmitt J. M., Bonner R. F., “Multiple scattering in optical coherence microscopy,” Appl. Opt. 34(25), 5699–5707 (1995). 10.1364/AO.34.005699 [DOI] [PubMed] [Google Scholar]
- 51.Kholodnykh A. I., et al. , “Accurate measurement of total attenuation coefficient of thin tissue with optical coherence tomography,” IEEE J. Sel. Top. Quantum Electron. 9(2), 210–221 (2003). 10.1109/JSTQE.2003.814194 [DOI] [Google Scholar]
- 52.Kholodnykh A. I., et al. , “Precision of measurement of tissue optical properties with optical coherence tomography,” Appl. Opt. 42(16), 3027–3037 (2003). 10.1364/AO.42.003027 [DOI] [PubMed] [Google Scholar]
- 53.Jacques S. L., et al. , “Measuring tissue optical properties in vivo using reflectance-mode confocal microscopy and OCT,” Proc. SPIE 6864, 68640B (2008). 10.1117/12.761803 [DOI] [Google Scholar]
- 54.Levitz D., et al. , “Quantitative characterization of developing collagen gels using optical coherence tomography,” J. Biomed. Opt. 15(2), 026019 (2010). 10.1117/1.3377961 [DOI] [PubMed] [Google Scholar]
- 55.Thrane L., et al. , “Extraction of optical scattering parameters and attenuation compensation in optical coherence tomography images of multilayered tissue structures,” Opt. Lett. 29(14), 1641–1643 (2004). 10.1364/OL.29.001641 [DOI] [PubMed] [Google Scholar]
- 56.Thrane L., Yura H. T., Andersen P. E., “Analysis of optical coherence tomography systems based on the extended Huygens–Fresnel principle,” J. Opt. Soc. Am. A 17(3), 484–490 (2000). 10.1364/JOSAA.17.000484 [DOI] [PubMed] [Google Scholar]
- 57.Munro P. R. T., Curatolo A., Sampson D. D., “Full wave model of image formation in optical coherence tomography applicable to general samples,” Opt. Express 23(3), 2541–2556 (2015). 10.1364/OE.23.002541 [DOI] [PubMed] [Google Scholar]
- 58.Munro P. R. T., “Three-dimensional full wave model of image formation in optical coherence tomography,” Opt. Express 24(23), 27016–27031 (2016). 10.1364/OE.24.027016 [DOI] [PubMed] [Google Scholar]
- 59.Munro P. R. T., Curatolo A., Sampson D. D., “A model of optical coherence tomography image formation based on Maxwell’s equations,” in IEEE Photonics Conf., pp. 134–135 (2016). 10.1109/IPCon.2016.7831012 [DOI] [Google Scholar]
- 60.Yao G., Wang L. V., “Monte Carlo simulation of an optical coherence tomography signal in homogeneous turbid media,” Phys. Med. Biol. 44(9), 2307–2320 (1999). 10.1088/0031-9155/44/9/316 [DOI] [PubMed] [Google Scholar]
- 61.Wang R. K., “Signal degradation by multiple scattering in optical coherence tomography of dense tissue: a Monte Carlo study towards optical clearing of biotissues,” Phys. Med. Biol. 47(13), 2281–2299 (2002). 10.1088/0031-9155/47/13/307 [DOI] [PubMed] [Google Scholar]
- 62.Kienle A., Forster F. K., Hibst R., “Influence of the phase function on determination of the optical properties of biological tissue by spatially resolved reflectance,” Opt. Lett. 26(20), 1571–1573 (2001). 10.1364/OL.26.001571 [DOI] [PubMed] [Google Scholar]
- 63.Nguyen V. D., et al. , “Dependent and multiple scattering in transmission and backscattering optical coherence tomography,” Opt. Express 21(24), 29145–29156 (2013). 10.1364/OE.21.029145 [DOI] [PubMed] [Google Scholar]
- 64.Turani Z., et al. , “Optical radiomic signatures derived from optical coherence tomography images improve identification of melanoma,” Cancer Res. 79(8), 2021–2030 (2019). 10.1158/0008-5472.CAN-18-2791 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 65.Ossowski P., et al. , “Realistic simulation and experiment reveals the importance of scatterer microstructure in optical coherence tomography image formation,” Biomed. Opt. Express 9(7), 3122–3136 (2018). 10.1364/BOE.9.003122 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 66.Brenner T., Reitzle D., Kienle A., “Optical coherence tomography images simulated with an analytical solution of Maxwell’s equations for cylinder scattering,” J. Biomed. Opt. 21(4), 045001 (2016). 10.1117/1.JBO.21.4.045001 [DOI] [PubMed] [Google Scholar]
- 67.Krüger B., Brenner T., Kienle A., “Solution of the inhomogeneous Maxwell’s equations using a Born series,” Opt. Express 25(21), 25165–25182 (2017). 10.1364/OE.25.025165 [DOI] [PubMed] [Google Scholar]
- 68.Bosschaart N., et al. , “A literature review and novel theoretical approach on the optical properties of whole blood,” Lasers Med. Sci. 29(2), 453–479 (2014). 10.1007/s10103-013-1446-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 69.Es’haghian S., et al. , “Investigation of optical attenuation imaging using optical coherence tomography for monitoring of scars undergoing fractional laser treatment,” J. Biophotonics 10(4), 511–522 (2017). 10.1002/jbio.201500342 [DOI] [PubMed] [Google Scholar]
- 70.Liew Y. M., et al. , “In vivo assessment of human burn scars through automated quantification of vascularity using optical coherence tomography,” J. Biomed. Opt. 18(6), 061213 (2013). 10.1117/1.JBO.18.6.061213 [DOI] [PubMed] [Google Scholar]
- 71.Gong P., et al. , “Optical coherence tomography angiography for longitudinal monitoring of vascular changes in human cutaneous burns,” Exp. Dermatol. 25(9), 722–724 (2016). 10.1111/exd.2016.25.issue-9 [DOI] [PubMed] [Google Scholar]
- 72.Gong P., et al. , “Imaging of skin birefringence for human scar assessment using polarization-sensitive optical coherence tomography aided by vascular masking,” J. Biomed. Opt. 19(12), 126014 (2014). 10.1117/1.JBO.19.12.126014 [DOI] [PubMed] [Google Scholar]
- 73.Pierce M. C., et al. , “Birefringence measurements in human skin using polarization-sensitive optical coherence tomography,” J. Biomed. Opt. 9(2), 287–291 (2004). 10.1117/1.1645797 [DOI] [PubMed] [Google Scholar]
- 74.Welzel J., Bruhns M., Wolff H. H., “Optical coherence tomography in contact dermatitis and psoriasis,” Arch. Dermatol. Res. 295(2), 50–55 (2003). 10.1007/s00403-003-0390-y [DOI] [PubMed] [Google Scholar]
- 75.Olsen J., et al. , “Dynamic optical coherence tomography of histamine induced wheals,” Skin Res. Technol. 24(4), 592–598 (2018). 10.1111/srt.12470 [DOI] [PubMed] [Google Scholar]
- 76.van Soest G., et al. , “Intravascular imaging for characterization of coronary atherosclerosis,” Curr. Opin. Biomed. Eng. 3, 1–12 (2017). 10.1016/j.cobme.2017.07.001 [DOI] [Google Scholar]
- 77.Levitz D., et al. , “Determination of optical scattering properties of highly-scattering media in optical coherence tomography images,” Opt. Express 12(2), 249–259 (2004). 10.1364/OPEX.12.000249 [DOI] [PubMed] [Google Scholar]
- 78.van der Meer F. J., et al. , “Localized measurement of optical attenuation coefficients of atherosclerotic plaque constituents by quantitative optical coherence tomography,” IEEE Trans. Med. Imaging 24(10), 1369–1376 (2005). 10.1109/TMI.2005.854297 [DOI] [PubMed] [Google Scholar]
- 79.Yabushita H., et al. , “Characterization of human atherosclerosis by optical coherence tomography,” Circulation 106(13), 1640–1645 (2002). 10.1161/01.CIR.0000029927.92825.F6 [DOI] [PubMed] [Google Scholar]
- 80.Gnanadesigan M., et al. , “Effect of temperature and fixation on the optical properties of atherosclerotic tissue: a validation study of an ex-vivo whole heart cadaveric model,” Biomed. Opt. Express 5(4), 1038–1049 (2014). 10.1364/BOE.5.001038 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 81.Kume T., et al. , “Assessment of coronary arterial thrombus by optical coherence tomography,” Am. J. Cardiol. 97(12), 1713–1717 (2006). 10.1016/j.amjcard.2006.01.031 [DOI] [PubMed] [Google Scholar]
- 82.Gnanadesigan M., et al. , “Optical coherence tomography attenuation imaging for lipid core detection: an ex-vivo validation study,” Int. J. Cardiovasc. Imaging 33(1), 5–11 (2017). 10.1007/s10554-016-0968-z [DOI] [PMC free article] [PubMed] [Google Scholar]
- 83.Gnanadesigan M., et al. , “Automated characterisation of lipid core plaques in vivo by quantitative optical coherence tomography tissue type imaging,” EuroInterv 12(12), 1490–1497 (2016). 10.4244/EIJ-D-15-00320 [DOI] [PubMed] [Google Scholar]
- 84.Hanahan D., Weinberg R. A., “The hallmarks of cancer,” Cell 100(1), 57–70 (2000). 10.1016/S0092-8674(00)81683-9 [DOI] [PubMed] [Google Scholar]
- 85.Zink D., Fischer A. H., Nickerson J. A., “Nuclear structure in cancer cells,” Nat. Rev. Cancer 4(9), 677–687 (2004). 10.1038/nrc1430 [DOI] [PubMed] [Google Scholar]
- 86.Wax A., et al. , “In situ detection of neoplastic transformation and chemopreventive effects in rat esophagus epithelium using angle-resolved low-coherence interferometry,” Cancer Res. 63(13), 3556–3559 (2003). [PubMed] [Google Scholar]
- 87.Yang Y., et al. , “Quantitative analysis of estimated scattering coefficient and phase retardation for ovarian tissue characterization,” Biomed. Opt. Express 3(7), 1548–1556 (2012). 10.1364/BOE.3.001548 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 88.Bus M. T. J., et al. , “Optical coherence tomography as a tool for in vivo staging and grading of upper urinary tract urothelial carcinoma: a study of diagnostic accuracy,” J. Urol. 196(6), 1749–1755 (2016). 10.1016/j.juro.2016.04.117 [DOI] [PubMed] [Google Scholar]
- 89.Freund J. E., et al. , “Grading upper tract urothelial carcinoma with the attenuation coefficient of in-vivo optical coherence tomography,” Lasers Surg. Med. 51(5), 399–406 (2019). 10.1002/lsm.23079 [DOI] [PubMed] [Google Scholar]
- 90.Muller B. G., et al. , “Prostate cancer diagnosis: the feasibility of needle-based optical coherence tomography,” J. Med. Imaging 2(3), 037501 (2015). 10.1117/1.JMI.2.3.037501 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 91.Buijs M., et al. , “An in-vivo prospective study of the diagnostic yield and accuracy of optical biopsy compared with conventional renal mass biopsy for the diagnosis of renal cell carcinoma: the interim analysis,” Eur. Urol. Focus 4(6), 978–985 (2018). 10.1016/j.euf.2017.10.002 [DOI] [PubMed] [Google Scholar]
- 92.Kut C., et al. , “Detection of human brain cancer infiltration ex vivo and in vivo using quantitative optical coherence tomography,” Sci. Transl. Med. 7(292), 292ra100 (2015). 10.1126/scitranslmed.3010611 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 93.Almasian M., et al. , “Pilot feasibility study of in vivo intraoperative quantitative optical coherence tomography of human brain tissue during glioma resection,” J. Biophotonics 12(10), e201900037 (2019). 10.1002/jbio.201900037 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 94.Yashin K. S., et al. , “Quantitative nontumorous and tumorous human brain tissue assessment using microstructural co- and cross-polarized optical coherence tomography,” Sci. Rep. 9, 2024 (2019). 10.1038/s41598-019-38493-y [DOI] [PMC free article] [PubMed] [Google Scholar]
- 95.Muller B. G., et al. , “Needle-based optical coherence tomography for the detection of prostate cancer: a visual and quantitative analysis in 20 patients,” J. Biomed. Opt. 23(8), 086001 (2018). 10.1117/1.JBO.23.8.086001 [DOI] [PubMed] [Google Scholar]
- 96.Swaan A., et al. , “One-to-one registration of en-face optical coherence tomography attenuation coefficients with histology of a prostatectomy specimen,” J. Biophotonics 12(4), e201800274 (2018). 10.1002/jbio.201800274 [DOI] [PubMed] [Google Scholar]
- 97.Barwari K., et al. , “Advanced diagnostics in renal mass using optical coherence tomography: a preliminary report,” J. Endourol. 25(2), 311–315 (2011). 10.1089/end.2010.0408 [DOI] [PubMed] [Google Scholar]
- 98.Barwari K., et al. , “Differentiation between normal renal tissue and renal tumours using functional optical coherence tomography: a phase I in vivo human study,” BJU Int. 110(8b), E415–E420 (2012). 10.1111/j.1464-410X.2012.11197.x [DOI] [PubMed] [Google Scholar]
- 99.Wagstaff P. G. K., et al. , “Percutaneous needle based optical coherence tomography for the differentiation of renal masses: a pilot cohort,” J. Urol. 195(5), 1578–1585 (2016). 10.1016/j.juro.2015.12.072 [DOI] [PubMed] [Google Scholar]
- 100.van der Schoot J., et al. , “The effect of glaucoma on the optical attenuation coefficient of the retinal nerve fiber layer in spectral domain optical coherence tomography images,” Invest. Ophthalmol. Visual Sci. 53(4), 2424–2430 (2012). 10.1167/iovs.11-8436 [DOI] [PubMed] [Google Scholar]
- 101.Vermeer K. A., et al. , “RPE-normalized RNFL attenuation coefficient maps derived from volumetric OCT imaging for glaucoma assessment,” Invest. Ophthalmol. Visual Sci. 53(10), 6102–6108 (2012). 10.1167/iovs.12-9933 [DOI] [PubMed] [Google Scholar]
- 102.DeBuc D. C., et al. , “Extracting diagnostic information from optical coherence tomography images of diabetic retinal tissues using depth-dependent attenuation rate and fractal analysis,” in Biomedical Optics and 3D Imaging, OSA Technical Digest, BTu3A.74 (2012). [Google Scholar]
- 103.Sun M., et al. , “Quantitative analysis of retinal layers on three-dimensional spectral-domain optical coherence tomography for pituitary adenoma,” PLoS One 12(6), e0179532 (2017). 10.1371/journal.pone.0179532 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 104.Klyen B. R., et al. , “Optical coherence tomography can assess skeletal muscle tissue from mouse models of muscular dystrophy by parametric imaging of the attenuation coefficient,” Biomed. Opt. Express 5(4), 1217–1232 (2014). 10.1364/BOE.5.001217 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 105.Cernohorsky P., et al. , “Quantitative assessment of optical properties in healthy cartilage and repair tissue by optical coherence tomography and histology,” IEEE J. Sel. Top. Quantum Electron. 22(3), 6801407 (2016). 10.1109/JSTQE.2015.2499958 [DOI] [Google Scholar]
- 106.Schneiderheinze D. H. P., Hillman T. R., Sampson D. D., “Modified discrete particle model of optical scattering in skin tissue accounting for multiparticle scattering,” Opt. Express 15(23), 15002–15010 (2007). 10.1364/OE.15.015002 [DOI] [PubMed] [Google Scholar]
- 107.Curatolo A., et al. , “Quantifying the influence of Bessel beams on image quality in optical coherence tomography,” Sci. Rep. 6, 23483 (2016). 10.1038/srep23483 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 108.Lamouche G., et al. , “Review of tissue simulating phantoms with controllable optical, mechanical and structural properties for use in optical coherence tomography,” Biomed. Opt. Express 3(6), 1381–1398 (2012). 10.1364/BOE.3.001381 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 109.Zaccanti G., Del Bianco S., Martelli F., “Measurements of optical properties of high-density media,” Appl. Opt. 42(19), 4023–4030 (2003). 10.1364/AO.42.004023 [DOI] [PubMed] [Google Scholar]
- 110.Canny J., “A computational approach to edge detection,” IEEE Trans. Pattern Anal. Mach. Intell. PAMI-8(6), 679–698 (1986). 10.1109/TPAMI.1986.4767851 [DOI] [PubMed] [Google Scholar]
- 111.Hori Y., et al. , “Automatic characterization and segmentation of human skin using three-dimensional optical coherence tomography,” Opt. Express 14(5), 1862–1877 (2006). 10.1364/OE.14.001862 [DOI] [PubMed] [Google Scholar]
- 112.Zahnd G., et al. , “Contour segmentation of the intima, media, and adventitia layers in intracoronary OCT images: application to fully automatic detection of healthy wall regions,” Int. J. Comput. Assist. Radiol. Surg. 12(11), 1923–1936 (2017). 10.1007/s11548-017-1657-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 113.Gambichler T., et al. , “In vivo data of epidermal thickness evaluated by optical coherence tomography: effects of age, gender, skin type, and anatomic site,” J. Dermatol. Sci. 44(3), 145–152 (2006). 10.1016/j.jdermsci.2006.09.008 [DOI] [PubMed] [Google Scholar]
- 114.Schmitt J. M., Xiang S. H., Yung K. M., “Speckle in optical coherence tomography,” J. Biomed. Opt. 4(1), 95–105 (1999). 10.1117/1.429925 [DOI] [PubMed] [Google Scholar]
- 115.Vakoc B. J., et al. , “Three-dimensional microscopy of the tumor microenvironment in vivo using optical frequency domain imaging,” Nat. Med. 15(10), 1219–1223 (2009). 10.1038/nm.1971 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 116.Roggan A., et al. , “Optical properties of circulating human blood in the wavelength range 400–2500 nm,” J. Biomed. Opt. 4(1), 36–46 (1999). 10.1117/1.429919 [DOI] [PubMed] [Google Scholar]
- 117.Blatter C., et al. , “In vivo label-free measurement of lymph flow velocity and volumetric flow rates using Doppler optical coherence tomography,” Sci. Rep. 6, 29035 (2016). 10.1038/srep29035 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 118.Gong P., et al. , “In vivo label-free lymphangiography of cutaneous lymphatic vessels in human burn scars using optical coherence tomography,” Biomed. Opt. Express 7(12), 4886–4898 (2016). 10.1364/BOE.7.004886 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 119.Gong P., et al. , “Label-free volumetric imaging of conjunctival collecting lymphatics ex vivo by optical coherence tomography lymphangiography,” J. Biophotonics 11(8), e201800070 (2018). 10.1002/jbio.201800070 [DOI] [PubMed] [Google Scholar]
- 120.Demidov V., et al. , “Analysis of low-scattering regions in optical coherence tomography: applications to neurography and lymphangiography,” Biomed. Opt. Express 10(8), 4207–4219 (2019). 10.1364/BOE.10.004207 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 121.Reif R., et al. , “Analysis of changes in reflectance measurements on biological tissues subjected to different probe pressures,” J. Biomed. Opt. 13(1), 010502 (2008). 10.1117/1.2870115 [DOI] [PubMed] [Google Scholar]
- 122.Lim L., et al. , “Probe pressure effects on human skin diffuse reflectance and fluorescence spectroscopy measurements,” J. Biomed. Opt. 16(1), 011012 (2011). 10.1117/1.3525288 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 123.de Boer J. F., Milner T. E., “Review of polarization sensitive optical coherence tomography and Stokes vector determination,” J. Biomed. Opt. 7(3), 359–371 (2002). 10.1117/1.1483879 [DOI] [PubMed] [Google Scholar]
- 124.Zhu D., et al. , “Recent progress in tissue optical clearing,” Laser Photonics Rev. 7(5), 732–757 (2013). 10.1002/lpor.201200056 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 125.Schmitt J. M., Kumar G., “Optical scattering properties of soft tissue: a discrete particle model,” Appl. Opt. 37(13), 2788–2797 (1998). 10.1364/AO.37.002788 [DOI] [PubMed] [Google Scholar]
- 126.Deng Z., et al. , “Viscous optical clearing agent for in vivo optical imaging,” J. Biomed. Opt. 19(7), 076019 (2014). 10.1117/1.JBO.19.7.076019 [DOI] [PubMed] [Google Scholar]
- 127.Genina E. A., et al. , “Optical coherence tomography monitoring of enhanced skin optical clearing in rats in vivo,” J. Biomed. Opt. 19(2), 021109 (2014). 10.1117/1.JBO.19.2.021109 [DOI] [PubMed] [Google Scholar]
- 128.Kodach V. M., et al. , “Determination of the scattering anisotropy with optical coherence tomography,” Opt. Express 19(7), 6131–6140 (2011). 10.1364/OE.19.006131 [DOI] [PubMed] [Google Scholar]
- 129.Schneider S., et al. , “Multiscale dispersion-state characterization of nanocomposites using optical coherence tomography,” Sci. Rep. 6, 31733 (2016). 10.1038/srep31733 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 130.Levitz D., et al. , “Non-destructive label-free monitoring of collagen gel remodeling using optical coherence tomography,” Biomaterials 31(32), 8210–8217 (2010). 10.1016/j.biomaterials.2010.06.042 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 131.Oldenburg A. L., et al. , “Plasmon-resonant gold nanorods as low backscattering albedo contrast agents for optical coherence tomography,” Opt. Express 14(15), 6724–6738 (2006). 10.1364/OE.14.006724 [DOI] [PubMed] [Google Scholar]
- 132.Yang X., et al. , “Quantitative assessment of muscle damage in the mdx mouse model of Duchenne muscular dystrophy using polarization-sensitive optical coherence tomography,” J. Appl. Physiol. 115(9), 1393–1401 (2013). 10.1152/japplphysiol.00265.2013 [DOI] [PubMed] [Google Scholar]
- 133.Villiger M., et al. , “Deep tissue volume imaging of birefringence through fibre-optic needle probes for the delineation of breast tumour,” Sci. Rep. 6, 28771 (2016). 10.1038/srep28771 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 134.Li Q., et al. , “Robust reconstruction of local optic axis orientation with fiber-based polarization-sensitive optical coherence tomography,” Biomed. Opt. Express 9(11), 5437–5455 (2018). 10.1364/BOE.9.005437 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 135.Kemp N. J., et al. , “Form-biattenuance in fibrous tissues measured with polarization-sensitive optical coherence tomography (PS-OCT),” Opt. Express 13(12), 4611–4628 (2005). 10.1364/OPEX.13.004611 [DOI] [PubMed] [Google Scholar]
- 136.Todorović M., Jiao S., Wang L. V., “Determination of local polarization properties of biological samples in the presence of diattenuation by use of Mueller optical coherence tomography,” Opt. Lett. 29(20), 2402–2404 (2004). 10.1364/OL.29.002402 [DOI] [PubMed] [Google Scholar]
- 137.Kiseleva E. B., et al. , “Optical coefficients as tools for increasing the optical coherence tomography contrast for normal brain visualization and glioblastoma detection,” Neurophotonics 6(3), 035003 (2019). 10.1117/1.NPh.6.3.035003 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 138.Kennedy B. F., Wijesinghe P., Sampson D. D., “The emergence of optical elastography in biomedicine,” Nat. Photonics 11(4), 215–221 (2017). 10.1038/nphoton.2017.6 [DOI] [Google Scholar]
- 139.Larin K. V., Sampson D. D., “Optical coherence elastography—OCT at work in tissue biomechanics [Invited],” Biomed. Opt. Express 8(2), 1172–1202 (2017). 10.1364/BOE.8.001172 [DOI] [PMC free article] [PubMed] [Google Scholar]