Table 1.
Length and coverage of the Tilapia lake virus (TiLV) segments from the Bangladesh isolate, and length of sequences used for phylogenetic analyses.
| Segment | Reported Length (nt) from Bacharach et al. [7] | BD-2017 Length (nt) | BD-2017 Coverage (Mean ± SD) | Trimmed Length with Full Coding Region Refs (nt) | Partial Segments with Shorter Refs (nt) |
|---|---|---|---|---|---|
| 1 | 1641 | 1620 | 90 ± 29 | 1560 | 1560 |
| 2 | 1471 | 1448 | 91 ± 24 | 1194 | 819 |
| 3 | 1371 | 1353 | 204 ± 44 | 1260 | 234 |
| 4 | 1250 | 1226 | 46 ± 18 | 1065 | 261 |
| 5 | 1099 | 1083 | 198 ± 61 | 1032 | |
| 6 | 1044 | 1024 | 177 ± 50 | 954 | |
| 7 | 777 | 758 | 92 ± 31 | 588 | |
| 8 | 657 | 637 | 289 ± 72 | 525 | |
| 9 | 548 | 531 | 341 ± 146 | 351 | 249 |
| 10 | 465 | 443 | 164 ± 44 | 342 | |
| Total | 10323 | 10123 | 150 ± 96 | 8871 |