Table 1. Assembly metrics for the E. cheiranthoides genome: v0.9=Falcon +Arrow assembly results, v1.2=genome assembly after Hi-C scaffolding and Pilon correction.
v0.9 | v1.2 pseudomolecules and contigs | v1.2 pseudomolecules only | |
---|---|---|---|
total length (Mbp) | 177.4 | 177.2 | 174.5 |
expected size (Mbp) | 205 | 205 | 205 |
number of contigs | 1087 | 224 | 8 |
N50 (Mbp) | 1.5 | 22.4 | 22.4 |
complete BUSCOs (out of 1,375) | 1359 | 1346 | 1356 |
complete and single copy BUSCOs (out of 1,375) | 1271 | 1300 | 1306 |
complete and duplicated BUSCOs (out of 1,375) | 88 | 46 | 50 |
fragmented BUSCOs (out of 1,375) | 5 | 8 | 6 |
missing BUSCOs (out of 1,375) | 11 | 21 | 13 |