Table 3:
No. | Assembly name | % error-free | Original N50 (Mb) | REAPR broken N50 (Mb) | % reduction | FCD errors |
---|---|---|---|---|---|---|
A1 | w2rap | 80.83 | 0.3 | 0.29 | 2 | 6,065 |
A2 | w2rap + lmp | 79.10 | 2.61 | 1.13 | 57 | 8,213 |
A3 | 10x | 85.90 | 5.26 | 1.69 | 68 | 11,379 |
A4 | 10x + lmp | 85.35 | 10.33 | 1.86 | 82 | 9,095 |
A5 | w2rap + bionano | 76.05 | 0.85 | 0.52 | 38 | 4,523 |
A6 | w2rap + lmp + bionano | 78.38 | 5.73 | 2.06 | 64 | 7,392 |
A7 | 10x + bionano | 84.65 | 10.84 | 2.00 | 82 | 13,068 |
A8 | 10x + lmp + bionano | 84.75 | 21.00 | 1.86 | 91 | 11,531 |
A9 | w2rap + 10x | 81.09 | 5.58 | 0.57 | 90 | 7,601 |
A10 | w2rap + lmp + bionano + 10x | 77.80 | 14.05 | 1.75 | 88 | 9,488 |