Abstract
Autophagy is an important mechanism for organisms to eliminate viruses and other intracellular pathogens. Siniperca chuatsi rhabdovirus (SCRV) is an agent that has caused devastating losses in Chinese perch (Siniperca chuatsi) industry. But the role of autophagy in Siniperca chuatsi rhabdovirus (SCRV) infection is not clearly understood. In this study, we identified that SCRV infection triggered autophagy in CPB cells, which was demonstrated by the appearance of the membrane vesicles, GFP-LC3 punctuate pattern, conversion of LC3-I to LC3-II, and the co-localization of autophagosomes and lysosomes. The changes of autophagy flux in SCRV infection indicated that autophagy was inhibited at the early stage of SCRV infection, but was promoted at the late stage. UV-inactivated SCRV can induce autophagy, suggesting that SCRV replication is not essential for the induction of autophagy. Furthermore, we found inducing autophagy with Rapa inhibited SCRV proliferation, but inhibiting autophagy with 3-MA or CQ increased SCRV production in CPB cells. Then we assessed the effects of PI3K/Akt-mTOR signaling pathway on SCRV induced autophagy. We found that SCRV infection activated PI3K/AKT signaling pathway at 4 hpi, but inhibited it at 8 hpi. SCRV-N mRNA and protein level were decreased by inhibiting PI3K with LY294002, but increased by activating PI3K with 740Y–P. Those results indicated that SCRV infection induced autophagy via the PI3K/Akt-mTOR signal pathway, which will provide new insights into SCRV pathogenesis and antiviral treatment strategies.
Keywords: Siniperca chuatsi, SCRV, Autophagy, PI3K/Akt-mTOR
Highlights
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SCRV infection triggered the complete autophagic process in CPB cells.
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►Inducing autophagy inhibited SCRV proliferation, but inhibiting autophagy increased SCRV production.
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SCRV infection induced autophagy via the PI3K/Akt-mTOR signal pathway.
1. Introduction
Siniperca chuatsi rhabdovirus (SCRV), as one of the piscine rhabdoviruses, has caused great losses to the Chinese perch aquaculture industry [1,2]. The viral genome is a negative single-stranded RNA with the length about 11 kb, which encodes five structural proteins, including RNA-dependent RNA polymerase protein (L), Glycoprotein (G), nucleoprotein (N), Phosphoprotein (P) and Matrix protein (M) [3]. SCRV infection can lead to visceral and skin bleeding, high morbidity and mortality [2].
Autophagy is a ubiquitous mechanism in eukaryotes that aims at eliminating useless or harmful substrates through catabolism to maintain cell homeostasis [4,5]. Under the normal physiology condition, autophagy maintains a low level to deliver damaged proteins and organelles to lysosomes. However, during stress response (hypoxia, starvation, endoplasmic reticulum stress or invading pathogens), autophagy is dramatically up-regulated [6]. This process starts with the formation of a cup-shaped membrane structure, termed the phagophore, and ends up with cargo degradation and release, termed the autophagosome-lysosome. In recent years, many studies have shown that autophagy plays a significant role in antiviral immunity [7,8]. Virus can not only induce autophagy of host cells, but also evade the host immune clearance by membrane vesicles. In return, host cells capture the intracellular viruses by autophagosome and degrade them by autolysosome [9]. It has been found that Autophagy was triggered by viral hemorrhagic septicemia virus (VHSV) and spring viraemia of carp virus (SVCV) [10]. SVCV induced autophagy to facilitate viral RNA replication and virions release in epithelioma papulosum cyprinid (EPC) cells [11]. Snakehead fish vesiculovirus (SHVV) induced apparent autophagy in SSN-1 cells and autophagy inhibited virus replication [12]. Autophagy can be repressed by PI3K/Akt/mTOR pathway in tumor cells [13]. Recent studies showed that PI3K/Akt/mTOR pathway is also involved in the virus-induced autophagy [7]. Many viruses can activate the PI3K/AKT pathway to promote viral infection, such as Hepatitis C Virus (HCV) [14], Marek s Disease Virus (MDV) [15], Newcastle disease virus (NDV) [16], Dengue Virus(DENV) [17], Herpes simplex virus (HSV) [18], Zaire Ebola virus (EBOV) [19], and Coxsackievirus B3(CVB3) [20]. However, the role of PI3K/Akt/mTOR signal pathway in the modulation of SCRV-induced-autophagy remains uncharacterized clearly.
In this study, we investigated the relationship between autophagy and SCRV replication in Chinese perch brain (CPB) cell line. Furthermore, the PI3K/Akt/mTOR signal pathway involved in the SCRV-induced autophagy was identified. These results will provide new insights into SCRV pathogenesis and antiviral treatment strategies.
2. Materials and methods
2.1. Cell line and virus strains
The Chinese perch brain cells (CPB), originated from mandarin fish (S. chuatsi) brain, was established in our laboratory and were propagated and maintained at 28 °C in Leibovitz's L-15 medium (GIBCO, USA) supplemented with 10% fetal bovine serum (GIBCO, USA) [21]. SCRV was isolated in our laboratory and propagated in CPB cells at 28 °C [2]. Virus stocks were stored at −80 °C.
2.2. Pharmaceuticals and antibodies
Rapamycin (Rapa), 3-methyladenine (3-MA), Chloroquine (CQ), LY294004 (LY), and 740Y–P were purchased from Sigma Aldrich (USA) and solubilized in DMSO except CQ solubilized in phosphate-buffered saline (PBS). p-Akt (Ser473) rabbit mAb, p-PI3K p85 (Tyr458)/p55 (Tyr199) antibody, and mTOR (7C10) rabbit mAb were purchased from CST (USA). p-mTOR (ser2448) antibody, LC3A/B antibody, β-tubulin antibody, and β-actin antibody were purchased from Abcam (USA). Horseradish peroxidase (HRP)-conjugated goat anti-rabbit or anti-mouse antibodies were purchased from KPL (USA). The rabbit polyclonal antibody of SCRV nucleoprotein (SCRV-N) was stored in our laboratory.
2.3. Viral infection and sample collection
CPB cells were infected with SCRV (MOI = 1). Following 1 h of adsorption at 28 °C, the inoculum was removed and the cells were washed twice with Hanks’ Balanced Salt Solution (HBSS) before adding L-15 medium with 2% [v/v] FBS. The SCRV-infected and mock-infected cells were sampled at indicated times.
2.4. Plasmid transfection and confocal fluorescence microscopy observation
The recombinant plasmid GFP-LC3 was constructed and stored in our laboratory [22]. The log phase CPB Cells were transfected by recombinant plasmid GFP-LC3 at the concentration of 2 μg per 100 μL FuGENE®6 Transfection Reagent (Promega) diluted with Opti-MEM (GIBCO). The 100 μL mixture was added dropwise onto CPB cells cultured in the 35-mm glass-bottomed culture dishes (NEST), then mixed gently, and incubated for 15min. The cells were disposed with Rapa or virus at 48 h post-transfection, then fixed with 4% paraformaldehyde for 15min, and permeabilized in 0.3% Triton X-100 for 15min. Nuclei were stained with 4’, 6-diamidino-2-phenylindole (DAPI) for 5min. Images were acquired under a laser confocal fluorescence microscope (Olympus fluoView 1200).
2.5. SCRV inactivation by UV
To obtain inactivated SCRV, the viral suspensions (5 mL) were exposed to ultravioledt (UV) at clean bench for 2 h and shaken every 15min. Then virus infectious activity was tested using three blind passages in CPB cells. Briefly, the UV-treated viruses (1 mL) were initially inoculated onto three 25 cm2 cell culture flasks at 28 °C and cell monolayer was observed daily to verify the occurrence of CPE for 10 days. Then the viral supernatant freeze-thawed three times was inoculated onto the new flasks every 7 days, and repeated twice. The absence of CPEs during this period confirmed that the virus was inactivated.
2.6. Transmission electron microscopy observation
The CPB cells with the confluency of 80–90% were infected with SCRV at a MOI of 1 and incubated for 8 h. Rapa-treated Cells were used as a positive control and untreated cells as a negative control. These cells were fixed with 2.5% glutaraldehyde in 0.1 M phosphate buffer (pH = 7.4) for 24 h at 4 °C and then post-fixed in 0.1 M phosphate buffer containing 1% osmium tetroxide for 1 h. Ultrathin sections were stained with uranyl acetate-lead citrate and examined by a Philips CM10 electron microscopy.
2.7. MTS assay
The cell viability was assessed using MTS assay according to CellTiter 96® AQueous One Solution Cell Proliferation Assay (Promega, USA) protocol. Briefly, cells were seeded (5 × 104 cells/well) in 96-well plates and allowed to attach overnight. Subsequently, cells were washed once with PBS and then fed fresh medium supplemented with Rapa (0, 0.05, 0.1, 0.2, 0.5 μM), or 3-MA (0, 10, 50, 100, 500 μM, and 1, 5 mM), or CQ (0, 1, 5, 10 mΜ), or LY294002 (0, 5, 10, 20, 50 μM), or 740Y–P (0, 10, 20, 30, 40, 50 μM). At 24, 48, 72 and 96 h post-treatment, 20 μL MTS solution was added into each well, and incubated for 3 h at 28 °C. Then cell viability was determined by recording the OD490 nm in an ELISA microplate reader (Infinite M200 Pro, Tecan, Switzerland). Medium without pharmaceuticals was used as control.
2.8. Pharmaceuticals treatment experiment
CPB cells were seeded into 6-well plates. When the cell confluence of 80–90% was reached, cells were washed and treated with different autophagy regulators at the optimal working concentration and pretreatment time. Then cells were infected with SCRV at a MOI of 1. Cells or supernatants were harvested at 12 h post-infection (hpi) for qRT-PCR, Western blot, and virus titration detection.
2.9. qRT-PCR assay
To assess gene mRNA level, the total RNA of cell samples with virus or pharmaceutical treated were extracted and the cDNA were synthesized as mentioned above. qPCR was performed using SYBR Premix Ex Taq kit (Takara). The 18S rRNA was used as the internal control. The primers were listed in Table 1 . The relative expression ratio was calculated using 2−ΔΔCT method. Reactions of SYBR Green were performed in a 20 μL volume, including 10 μL 2 × SYBR® Premix Ex Taq™, 0.4 μL each forward and reverse primer(10 μM), 0.4 μL ROX reference dye II, and 6.8 μL DEPC water and 2 μL cDNA. All reactions were performed in triplicate and the cycling parameters were designed according to the instructions.
Table 1.
Primers used in this study.
| Name | Sequence(5′–3′) | Application |
|---|---|---|
| LC3-F | GGGGTACCATGCCTTCAGAAAAAACC | cloning LC3B |
| LC3-R | CGGGATCCTTGGGCGGTCGTAGC | |
| SCRV/G-F | ATGAAATCAATCATTGCACTTACGT | gene expression |
| SCRV/G-R | TTAGGGAACAAATTGATACTGCTGC | |
| SCRV/M-F | ATGCCTCTGTTTAAGAAGAGCAACA | |
| SCRV/M-R | TTAATGCCAGCTATGACCAGGGTC | |
| SCRV/N–F | ATGGAAAACCAAATCATCAAGAG | |
| SCRV/N-R | TCACAAAGCTTGGTGTTTCAG | |
| 18S–F | CATTCGTATTGTGCCGCTAGA | internal control |
| 18S-R | CAAATGCTTTCGCTTTGGTC |
2.10. Western blot analysis
Cells were collected and lysed in RIPA buffer with 1 mM PMSF. Proteins were separated by 12% or 7% SDS-PAGE and transferred onto Immobilon-P polyvinylidene difluoride membranes (Millipore, USA). Blots were incubated with the indicated primary antibody (dilution concentration according to the recommendation), and subsequently incubated with peroxidase-conjugated goat-anti-rabbit IgG (1:5000 dilution). Immunoreactive proteins were visualized by chemiluminescence using Thermo Scientific Pierce Western Blot ECL Plus (Thermo, USA). Densitometry of bands representing protein expression was done using Sigma Scan Pro5 software. For each immunoblot, the band intensity of each lane was normalized relative to the loading control β-Tubulin or β-Actin.
2.11. Determination of virus titration in supernatants
Supernatants were harvested at 12 h post-infection (hpi), and viral titers were measured by tissue culture infectious dose (TCID50). Samples were filtrated through a 0.22 μm filter and serially diluted 10-fold in L-15. CPB cells were inoculated with the diluted samples for 7 d. CPE was observed and recorded every day. The TCID50 was calculated using the Karber method.
2.12. Statistical analysis
Results are expressed as the means ± standard deviation (SD) from at least 3 experiments. All tests were conducted using SPSS software (version 21.0). Values were considered statistically significant at P < 0.05 and extremely significant at P < 0.01.
3. Results
3.1. SCRV infection induced autophagy in CPB cells
To determine whether autophagy is triggered in SCRV-infected cells, we directly detected visualized formation of autophagy-related structures by transmission electron microscope. As Fig. 1 A showed that a lot of membrane vesicles were apparently observed in the cytoplasm of SCRV-infected and Rapa-treated cells, but rarely observed in mock cells.
Fig. 1.
SCRV infection induced autophagy in CPB cells. (A) Observation of autophagy-related structures in CPB cells by TEM. The cells were fixed at 8 h post-SCRV infection (MOI = 0.01). Rapamycin treatment was used as a positive control. The mock samples were CPB cells without infection or treatment. The autophagosome was indicated by the red arrow. The SCRV virion was indicated by the blue arrow. (B) Formation of punctuate GFP-LC3 in CPB cells after SCRV infection. Cells were transfected with GFP-LC3 plasmid and infected by SCRV (MOI = 0.01). Rapamycin treatment was used as a positive control. The mock samples were transfected CPB cells without infection and treatment. Cells were fixed and permeabilizated at 8h after SCRV infection. The cell nucleus was counterstained with DAPI. (C) Representative confocal images of co-localization of the autophagosome marker GFP-LC3 (green) with the lysosome marker LysoTracker (red) in CPB cells infected with SCRV. The mock samples were CPB cells without infection. (D) Conversion of LC3-I to LC3-II in CPB cells infected with SCRV. The SCRV-infected (MOI = 0.01) cells and mock-infected cells were collected at 2 h, 4 h, 8 h. Conversion of LC3-I to lapidated LC3-II was monitored by Western blotting. (E) LC3-II expression in CPB cells treated by UV-inactivated SCRV. The cells treated by UV-inactivated SCRV and mock cells were collected at 2h, 4 h, 8 h. Lapidated LC3-II was monitored by Western blotting. Three parallel samples were pooled as biological replicates. *p < 0.05; **p < 0.01. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
To observe the formation of autophagosomes in infected CPB cells, we cloned Siniperca chuatsi LC3 gene and constructed plasmid, which was transfected into CPB cells. As shown in Fig. 1B, the accumulation of GFP-LC3 fluorescent dots was observed in the transiently transfected CPB cells infected with SCRV or treated with Rapa. In contrast, there was almost no fluorescent dot formation in the mock cells. Furthermore, the fusion of autophagosomes with lysosomes was verified by labeling lysosomes with an acidified compartments marker LysoTracker. As shown in Fig. 1C, the co-localization of GFP-LC3-tagged autophagosomes and LysoTracker-stained lysosomes can be detected in SCRV-infected CPB cells, while mock cells exhibited almost no overlap. These results indicated that cells underwent a complete autophagic process following SCRV infection.
The levels of LC3-II, a form conjugated with phosphatidylethanolamine and present on membranes and autophagosomes, correlates with autophagy formation [23]. SCRV infection triggered the autophagy by detecting LC3 protein. As shown in Fig. 1D, compared to the mock group, LC3- II/LC3-I in the infection group was gradually decreased at 2 hpi and 4 hpi, but then LC3- II/LC3-I was progressively increased at 8 hpi. It indicated that SCRV infection inhibited autophagy at the early stage of life cycle (0–4 hpi), and promoted autophagy at the late stage of life cycle (8–12 hpi). Above results indicated that SCRV infection triggered autophagy in CPB cells.
To further clarify whether SCRV replication is required for the induction of autophagy, we inactivated SCRV by ultraviolet (UV) radiation and examined its capability of inducing autophagy. The results of three blind passages verified that UV-treated SCRV was inactivated completely (data not shown). As shown in Fig. 1E, the relative amounts of LC3-II were increased in CPB cells inoculated with UV-inactivated SCRV compared to the levels in mock-infected cells at 2 hpi, 4 hpi and 8 hpi, suggesting that SCRV replication is not essential for the induction of autophagy in CPB cells.
3.2. Autophagy inhibited SCRV replication in CPB cells
SCRV infection induced autophagy in CPB cells. Thus, we want to know whether SCRV replication is regulated by autophagy. The cytotoxicity test results showed that the CPB cells were inoculated with 500 nM Rapa, 500 μM 3-MA and 1 μM CQ, respectively, the cell viability was more than 70% (Fig. 2 A). Considering that 3-MA effect of different treated concentration or time is uncertainty in different cells, and Rapa induced autophagic effect is not ideal in some cell lines [24], we explored the effective working conditions according to LC3 protein level. The results showed that Rapa and 3-MA had a strong effect at a higher working concentration of 0.5 μΜ and 0.5 mM, respectively (Fig. 2B). The treated time results showed that the inhibition effect of 3-MA with 3h pretreatment was better and induction effect of Rapa with 12h pretreatment is more obvious (Fig. 2C). Thus the working concentration and pretreatment time of Rapa and 3-MA are 0.5 μΜ for 12h and 0.5 mM for 3h, respectively. CQ working concentration and pretreatment time was 1 μM for 4h referring to our previous published paper [22].
Fig. 2.
Optimization of concentration and treatment time of autophagy regulators. (A) The effects of autophagy regulators on CPB cell viability. CPB cells were cultured for 24 h, 48 h, 72 h, 96 h in the presence of 0, 25, 50, 100, 200, 500 nM rapamycin, 0, 0.01, 0.05, 0.1, 0.5, 1.0, 5.0 mM 3-MA, or 0, 1, 5, 10 μM CQ. The cell viability was determined using the MTS assay. Three parallel samples were pooled as biological replicates. *p < 0.05; **p < 0.01. (B) Confirmation of the autophagy regulators working concentration. CPB cells were treated with 0.1, 0.2, 0.5 μM rapamycin, or 0.1, 0.2, 0.5 mM 3-MA. LC3 protein level was detected by western blotting. (C) Confirmation of the autophagy regulators treatment time. CPB cells were treated with 0.5 mM 3-MA for 2h, 3h, 4h, or 0.5 μM rapamycin for 4h, 12h. LC3 protein level was detected by western blotting. CPB cells at 0h post-treatment were used as mock.
As shown in Fig. 3 A, compared to the SCRV-infected cells at 12 hpi, gene transcription of SCRV-G, SCRV-M, and SCRV-N was significantly inhibited in the Rapa-treated cells. On the contrary, gene transcription of SCRV-G, SCRV-M, and SCRV-N was significantly increased upon 3-MA or CQ treatment. SCRV-N protein level in the Rapa-treated group was significantly lower than that in the 3-MA or CQ treated group, which is consistent with the results of gene transcription level (Fig. 3B). Furthermore, viral titer results exhibited that titer of SCRV supernatant was increased after blocking autophagy by 3-MA or CQ (Fig. 3C). However, activating autophagy with Rapa reduced the SCRV titer (Fig. 3C). Together, these results indicated that autophagy inhibited SCRV replication in CPB cells.
Fig. 3.
The effect on SCRV replication in CPB cells by regulating autophagy. (A) The SCRV gene expression level was determined by qPCR. CPB cells were treated with or without autophagy regulators, then infected with SCRV (MOI = 1), and relative expression levels of SCRV-G, SCRV-M, and SCRV-N at 12 hpi were determined by qRT-PCR. (B) The SCRV protein level was analized by western-blotting. CPB cells were treated with or without autophagy regulators, then infected with SCRV (MOI = 1), and SCRV-N protein at 12 hpi was determined by Western blotting. β-Tubulin was used as an internal control. (C) The level of extracellular SCRV yield was determined. The CPB cells were infected with SCRV after pretreated by rapamycin, 3-MA or CQ, viral titers in the supernatant at 12 hpi were measured by 50% tissue culture infectious dose (TCID50). The viral titers were calculated using the Karber method. For each experiment, three to eight parallel samples were pooled as biological replicates. *p < 0.05; **p < 0.01.
3.3. SCRV infection induced autophagy by depressing PI3K/Akt/mTOR signaling pathway in CPB cells
Subsequently, we investigated whether PI3K/Akt/mTOR signaling pathway was involved in SCRV-induced autophagy. As shown in Fig. 4 A, compared to the control groups, SCRV infection induced the up-regulation of p-PI3K, p-AKT, p-mTOR and down-regulation of LC3-Ⅱ at 4 hpi, but the opposite result was observed at 8 hpi. Then, the PI3K inhibitor LY294002 (20 μM) and the activator 740Y–P (10 μM) were used to assess the effect of PI3K/Akt/mTOR on autophagy in CPB cells (Fig. 4B). In the 740Y–P treatment group, the expression level of p-PI3K, p-AKT, and p-mTOR was up-regulated but LC3-Ⅱwas down-regulated, but in the LY294002 treatment group, the opposite result was observed. These results proved LY294002 and 740Y–P were effective in CPB cells and could be used for later experiments. Next, SCRV replication was determined in CPB cells treated with LY294002 and 740Y–P. As shown in Fig. 4C, compared to the control group, qRT-PCR and western blotting results showed that the SCRV/N mRNA and protein expression were significantly decreased in the 740Y–P group, but they were significantly increased in the LY294002 group, indicating that inhibiting PI3K can promote SCRV replication, but activating PI3K can inhibit SCRV replication. Above results indicated that SCRV infection induced autophagy via PI3K/Akt/mTOR signaling pathway.
Fig. 4.
SCRV induced autophagy by activating PI3K/Akt-mTOR pathway. (A) Effect of SCRV infection on the PI3K/Akt-mTOR pathway. CPB cells were infected with SCRV and sampled at 4 hpi or 8 hpi. The expression level of p-PI3K, p-AKT, mTOR, p-mTOR, LC3 protein was determined by Western blotting. (B) The effects of PI3K inhibitor LY294002 and PI3K activator 740Y–P on PI3K/Akt-mTOR pathway. The cell viability treated with LY294002 and 740Y–P was determined using the MTS assay. Then CPB cells treated with LY294002 (20 μM) and 740Y–P (10 μM) were sampled at 8 hpi. The expression level of p-PI3K, p-AKT, mTOR, p-mTOR, LC3 protein was determined by Western blotting. (C) Effect on SCRV replication in CPB cells treated with LY294002 or 740Y–P. CPB cells treated with LY294002 or 740Y–P were infected with SCRV and sampled at 8 hpi. The expression level of SCRV-N mRNA and protein was determined by qRT-PCR and Western blotting. *p < 0.05; **p < 0.01.
4. Discussion
Autophagy is an evolutionarily conserved membrane-trafficking process and maintains the cellular metabolic homeostasis. Besides its role in healthy catabolic processes, many viruses induce autophagy for their own benefit during virus infection, such as VHSV [10], SVCV [11], SHVV [12], RGNNV [25], IPNV [26], rotavirus [27], etc. In this study, we observed that SCRV infection induced a complete autophagy process in CPB cells.
Many viruses manipulate the autophagic pathway to ensure their own replication and survival. Some viruses induce autophagy for their own benefit during virus infection, such as spring viraemia of carp virus (SVCV), newcastle disease virus (NDV), etc [11,28,29]. But some viruses block autophagy for their multiplication, such as canine distemper virus (CDV), human parainfluenza virus type 3 (HPIV3), etc [30,31]. Generally, it is well demonstrated that influenza A virus (IAV) infection triggers autophagosome formation for providing a replicative niche for IAV, but inhibits the fusion of autophagosomes with lysosomes avoiding the host's defenses [7]. In this study, we found that LC3- II/LC3-I in the SCRV infection group was firstly gradually decreased at 2 hpi and 4 hpi, but then progressively increased at 8 hpi. Our previous studies have showed that SCRV completed entering and transcription at the early stage of life cycle (0–4 hpi), and completed assembly and progeny virus release at the late stage of life cycle (8–12 hpi) in CPB cells [32]. These results indicated that SCRV infection inhibited autophagy at early stage of life cycle, but promoted autophagy at late stage of life cycle.
For host defense system, autophagy serves as an important function in innate immunity by eliminating intracellular pathogens. For example, herpes simplex virus-1 (HSV-1) activating host autophagy lead to its degradation in host cells [33]. Autophagy inhibits the replication of vesicular stomatitis virus (VSV) both in vitro and in vivo [34]. In this study, we found that SCRV multiplication (mRNA, protein and viral titer) was increased when inhibiting autophagy with 3-MA or CQ, but it was decreased when promoting autophagy with Rapa. Those indicated that induction of autophagy inhibited SCRV proliferation and inhibition of autophagy promoted SCRV proliferation, inferring autophagy in CPB cells played an antiviral role in SCRV infection. These results were similar to the researches on VHSV in ZF4 cells [10], and SHVV in SSN-1 cells [12].
Autophagy is negatively regulated by the PI3K-AKT-mTOR pathway [35]. Some studies have shown that activating PI3K/AKT pathway can promote viral infection and replication, such as porcine reproductive and respiratory syndrome virus (PRRSV) and Middle East respiratory syndrome coronavirus (MERS-CoV) [36]. It is reported that PI3K/Akt/mTOR signaling pathway participates in the process of autophagy induced by CVB3 infection, and PI3K inhibition alleviated autophagy and decreased CVB3 mRNA replication and VP1 expression [20]. In contrast, some viruses replications were inhibited by activating the PI3K-AKT-mTOR pathway, such as hepatitis E virus (HEV) [37]. In this paper, we found that PI3K/Akt/mTOR signaling pathway was activated at 4 hpi, but depressed at 8 hpi, accompanied with LC3-Ⅱdown-regulation at 4 hpi or up-regulation at 8 hpi. It indicated that SCRV infection promoted PI3K/Akt/mTOR signaling pathway at the early stage of life cycle, and inhibited this pathway at the late stage of life cycle, which was exactly contrary to the change trend of SCRV-induced autophagy. And SCRV-N mRNA and protein levels at 8 hpi were increased by activating PI3K with 740Y–P, but decreased by inhibiting PI3K with LY294002, which further indicated that SCRV infection induced autophagy via PI3K-AKT-mTOR pathway and activating the PI3K-AKT-mTOR pathway promoted SCRV replication.
In conclusion, the relationship between SCRV and autophagy was elicited based on the CPB cell model. Those results revealed that SCRV infection induced autophagy. Promotion of autophagy decreased SCRV multiplication, and inhibition of autophagy increased the SCRV proliferation. Furthermore it was showed that PI3K-Akt-mTOR signaling pathway participated in virus-induced autophagy. All of above results will provide new insights into SCRV pathogenesis and antiviral treatment strategies.
CRediT authorship contribution statement
Xiaozhe Fu: Methodology, Resources, Validation, Formal analysis, Data curation, Visualization, Writing - original draft. Yue Ming: Validation, Formal analysis, Data curation, Visualization, Writing - original draft. Chen Li: Validation, Formal analysis, Data curation, Visualization, Writing - original draft. Yinjie Niu: Methodology, Formal analysis, Writing - review & editing. Qiang Lin: Methodology, Resources. Lihui Liu: Resources. Hongru Liang: Methodology. Zhibin Huang: Methodology. Ningqiu Li: Conceptualization, Methodology, Resources, Writing - review & editing, Supervision, Project administration, Funding acquisition.
Acknowledgments
This study was supported by National Natural Science Foundation of China (31872589, U1701233), National Key Research and Development Program of China (2018YFD0900501, 2019YFD0900105), Special Funds for Economic Development of Marine Economy of Guangdong Province (GDME-2018C007), China-ASEAN Maritime Cooperation Fund and Guangdong Provincial Special Fund For Modern Agriculture Industry Technology Innovation Teams (2019KJ140, 2019KJ141), Pearl River Science & Technology Nova Program of Guangzhou City (no. 201710010087).
References
- 1.Tao Jian-Jun, Gui Jian-Fang, Zhang Q.-Y. Isolation and characterization of a rhabdovirus from co-infection of two viruses in Mandarin fish. Aquaculture. 2007;262:1–9. [Google Scholar]
- 2.Fu X., Lin Q., Liang H., Liu L., Huang Z., Li N., Su J. The biological features and genetic diversity of novel fish rhabdovirus isolates in China. Arch. Virol. 2017;162(9):2829–2834. doi: 10.1007/s00705-017-3416-z. [DOI] [PubMed] [Google Scholar]
- 3.Ma D., Deng G., Bai J., Li S., Yu L., Quan Y., Yang X., Jiang X., Zhu Z., Ye X. A strain of Siniperca chuatsi rhabdovirus causes high mortality among cultured Largemouth Bass in South China. J. Aquat. Anim. Health. 2013;25(3):197–204. doi: 10.1080/08997659.2013.799613. [DOI] [PubMed] [Google Scholar]
- 4.Klionsky D.J. Autophagy: from phenomenology to molecular understanding in less than a decade. Nat. Rev. Mol. Cell Biol. 2007;8(11):931–937. doi: 10.1038/nrm2245. [DOI] [PubMed] [Google Scholar]
- 5.Fader C.M., Colombo M.I. Autophagy and multivesicular bodies: two closely related partners. Cell Death Differ. 2009;16(1):70–78. doi: 10.1038/cdd.2008.168. [DOI] [PubMed] [Google Scholar]
- 6.Petibone D.M., Majeed W., Casciano D.A. Autophagy function and its relationship to pathology, clinical applications, drug metabolism and toxicity. J. Appl. Toxicol. 2017;37(1):23–37. doi: 10.1002/jat.3393. [DOI] [PubMed] [Google Scholar]
- 7.Wang Y., Jiang K., Zhang Q., Meng S., Ding C. Autophagy in negative-strand RNA virus infection. Front. Microbiol. 2018;9:206. doi: 10.3389/fmicb.2018.00206. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8.Zang F., Chen Y., Lin Z., Cai Z., Yu L., Xu F., Wang J., Zhu W., Lu H. Autophagy is involved in regulating the immune response of dendritic cells to influenza A (H1N1) pdm09 infection. Immunology. 2016;148(1):56–69. doi: 10.1111/imm.12587. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9.Jackson W.T. Viruses and the autophagy pathway. Virology. 2015;479–480:450–456. doi: 10.1016/j.virol.2015.03.042. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10.García-Valtanen P., Ortega-Villaizán M.e.M., Martínez-López A., Medina-Gali R., Pérez L., Mackenzie S., Figueras A., Coll J.M., Estepa A. Autophagy-inducing peptides from mammalian VSV and fish VHSV rhabdoviral G glycoproteins (G) as models for the development of new therapeutic molecules. Autophagy. 2014;10(9):1666–1680. doi: 10.4161/auto.29557. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Liu L., Zhu B., Wu S., Lin L., Liu G., Zhou Y., Wang W., Asim M., Yuan J., Li L., Wang M., Lu Y., Wang H., Cao J., Liu X. Spring viraemia of carp virus induces autophagy for necessary viral replication. Cell Microbiol. 2015;17(4):595–605. doi: 10.1111/cmi.12387. [DOI] [PubMed] [Google Scholar]
- 12.Wang Y., Chen N., Hegazy A.M., Liu X., Wu Z., Zhao L., Qin Q., Lan J., Lin L. Autophagy induced by snakehead fish vesiculovirus inhibited its replication in SSN-1 cell line. Fish Shellfish Immunol. 2016;55:415–422. doi: 10.1016/j.fsi.2016.06.019. [DOI] [PubMed] [Google Scholar]
- 13.Chen J., Yuan J., Zhou L., Zhu M., Shi Z., Song J., Xu Q., Yin G., Lv Y., Luo Y., Jia X., Feng L. Regulation of different components from Ophiopogon japonicus on autophagy in human lung adenocarcinoma A549Cells through PI3K/Akt/mTOR signaling pathway. Biomed. Pharmacother. 2017;87:118–126. doi: 10.1016/j.biopha.2016.12.093. [DOI] [PubMed] [Google Scholar]
- 14.Liu Z., Tian Y., Machida K., Lai M.M., Luo G., Foung S.K., Ou J.H. Transient activation of the PI3K-AKT pathway by hepatitis C virus to enhance viral entry. J. Biol. Chem. 2012;287(50):41922–41930. doi: 10.1074/jbc.M112.414789. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 15.Li H., Zhu J., He M., Luo Q., Liu F., Chen R. Marek's disease virus activates the PI3K/Akt pathway through interaction of its protein meq with the P85 subunit of PI3K to promote viral replication. Front. Microbiol. 2018;9:2547. doi: 10.3389/fmicb.2018.02547. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Kang Y., Yuan R., Zhao X., Xiang B., Gao S., Gao P., Dai X., Feng M., Li Y., Xie P., Gao X., Ren T. Transient activation of the PI3K/Akt pathway promotes Newcastle disease virus replication and enhances anti-apoptotic signaling responses. Oncotarget. 2017;8(14):23551–23563. doi: 10.18632/oncotarget.15796. [DOI] [PMC free article] [PubMed] [Google Scholar] [Retracted]
- 17.Cuartas-López A.M., Hernández-Cuellar C.E., Gallego-Gómez J.C. Disentangling the role of PI3K/Akt, Rho GTPase and the actin cytoskeleton on dengue virus infection. Virus Res. 2018;256:153–165. doi: 10.1016/j.virusres.2018.08.013. [DOI] [PubMed] [Google Scholar]
- 18.Zheng K., Xiang Y., Wang X., Wang Q., Zhong M., Wang S., Fan J., Kitazato K., Wang Y. Epidermal growth factor receptor-PI3K signaling controls cofilin activity to facilitate herpes simplex virus 1 entry into neuronal cells. mBio. 2014;5(1) doi: 10.1128/mBio.00958-13. e00958-13. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 19.Saeed M.F., Kolokoltsov A.A., Freiberg A.N., Holbrook M.R., Davey R.A. Phosphoinositide-3 kinase-Akt pathway controls cellular entry of Ebola virus. PLoS Pathog. 2008;4(8) doi: 10.1371/journal.ppat.1000141. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 20.Chang H., Li X., Cai Q., Li C., Tian L., Chen J., Xing X., Gan Y., Ouyang W., Yang Z. The PI3K/Akt/mTOR pathway is involved in CVB3-induced autophagy of HeLa cells. Int. J. Mol. Med. 2017;40(1):182–192. doi: 10.3892/ijmm.2017.3008. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21.Fu X., Li N., Lai Y., Luo X., Wang Y., Shi C., Huang Z., Wu S., Su J. A novel fish cell line derived from the brain of Chinese perch Siniperca chuatsi: development and characterization. J. Fish. Biol. 2015;86(1):32–45. doi: 10.1111/jfb.12540. [DOI] [PubMed] [Google Scholar]
- 22.Li C., Fu X., Lin Q., Liu L., Liang H., Huang Z., Li N. Autophagy promoted infectious kidney and spleen necrosis virus replication and decreased infectious virus yields in CPB cell line. Fish Shellfish Immunol. 2017;60:25–32. doi: 10.1016/j.fsi.2016.11.037. [DOI] [PubMed] [Google Scholar]
- 23.Kabeya Y., Mizushima N., Ueno T., Yamamoto A., Kirisako T., Noda T., Kominami E., Ohsumi Y., Yoshimori T. LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing. EMBO J. 2000;19(21):5720–5728. doi: 10.1093/emboj/19.21.5720. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 24.Wu Y.T., Tan H.L., Shui G., Bauvy C., Huang Q., Wenk M.R., Ong C.N., Codogno P., Shen H.M. Dual role of 3-methyladenine in modulation of autophagy via different temporal patterns of inhibition on class I and III phosphoinositide 3-kinase. J. Biol. Chem. 2010;285(14):10850–10861. doi: 10.1074/jbc.M109.080796. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 25.Li C., Liu J., Zhang X., Yu Y., Huang X., Wei J., Qin Q. Red grouper nervous necrosis virus (RGNNV) induces autophagy to promote viral replication. Fish Shellfish Immunol. 2020;98:908–916. doi: 10.1016/j.fsi.2019.11.053. [DOI] [PubMed] [Google Scholar]
- 26.Dong Y., Zhao J., Chen X., Liu M., Ren G., Lu T., Shao Y., Xu L. Autophagy induced by infectious pancreatic necrosis virus promotes its multiplication in the Chinook salmon embryo cell line CHSE-214. Fish Shellfish Immunol. 2020;97:375–381. doi: 10.1016/j.fsi.2019.12.067. [DOI] [PubMed] [Google Scholar]
- 27.Zhou Y., Geng P., Liu Y., Wu J., Qiao H., Xie Y., Yin N., Chen L., Lin X., Yi S., Zhang G., Li H., Sun M. Rotavirus-encoded virus-like small RNA triggers autophagy by targeting IGF1R via the PI3K/Akt/mTOR pathway. Biochim. Biophys. Acta (BBA) - Mol. Basis Dis. 2018;1864(1):60–68. doi: 10.1016/j.bbadis.2017.09.028. [DOI] [PubMed] [Google Scholar]
- 28.Meng C., Zhou Z., Jiang K., Yu S., Jia L., Wu Y., Liu Y., Meng S., Ding C. Newcastle disease virus triggers autophagy in U251 glioma cells to enhance virus replication. Arch. Virol. 2012;157(6):1011–1018. doi: 10.1007/s00705-012-1270-6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29.Sun Y., Yu S., Ding N., Meng C., Meng S., Zhang S., Zhan Y., Qiu X., Tan L., Chen H., Song C., Ding C. Autophagy benefits the replication of Newcastle disease virus in chicken cells and tissues. J. Virol. 2014;88(1):525–537. doi: 10.1128/JVI.01849-13. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 30.Ding B., Zhang G., Yang X., Zhang S., Chen L., Yan Q., Xu M., Banerjee A.K., Chen M. Phosphoprotein of human parainfluenza virus type 3 blocks autophagosome-lysosome fusion to increase virus production. Cell Host Microbe. 2014;15(5):564–577. doi: 10.1016/j.chom.2014.04.004. [DOI] [PubMed] [Google Scholar]
- 31.Faure M. The p value of HPIV3-mediated autophagy inhibition. Cell Host Microbe. 2014;15(5):519–521. doi: 10.1016/j.chom.2014.04.014. [DOI] [PubMed] [Google Scholar]
- 32.Guo X., Fu X., Liang H., Lin Q., Liu L., Niu Y., Li N. Reductive glutamine metabolism promotes the efficient replication of Siniperca chuatsi rhabdovirus in Chinese perch brain cells. J. Fish. Sci. China. 2019;26(5):993–1003. [Google Scholar]
- 33.Dong X., Levine B. Autophagy and viruses: adversaries or allies? J Innate Immun. 2013;5(5):480–493. doi: 10.1159/000346388. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34.Shelly S., Lukinova N., Bambina S., Berman A., Cherry S. Autophagy is an essential component of Drosophila immunity against vesicular stomatitis virus. Immunity. 2009;30(4):588–598. doi: 10.1016/j.immuni.2009.02.009. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35.Cheng P.H., Lian S., Zhao R., Rao X.M., McMasters K.M., Zhou H.S. Combination of autophagy inducer rapamycin and oncolytic adenovirus improves antitumor effect in cancer cells. Virol. J. 2013;10:293. doi: 10.1186/1743-422X-10-293. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 36.Kindrachuk J., Ork B., Hart B.J., Mazur S., Holbrook M.R., Frieman M.B., Traynor D., Johnson R.F., Dyall J., Kuhn J.H., Olinger G.G., Hensley L.E., Jahrling P.B. Antiviral potential of ERK/MAPK and PI3K/AKT/mTOR signaling modulation for Middle East respiratory syndrome coronavirus infection as identified by temporal kinome analysis. Antimicrob. Agents Chemother. 2015;59(2):1088–1099. doi: 10.1128/AAC.03659-14. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37.Zhou X., Wang Y., Metselaar H.J., Janssen H.L., Peppelenbosch M.P., Pan Q. Rapamycin and everolimus facilitate hepatitis E virus replication: revealing a basal defense mechanism of PI3K-PKB-mTOR pathway. J. Hepatol. 2014;61(4):746–754. doi: 10.1016/j.jhep.2014.05.026. [DOI] [PubMed] [Google Scholar]




