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. 2020 Jun 26;10:10776. doi: 10.1038/s41598-020-67917-3

Author Correction: Genome-based Salmonella serotyping as the new gold standard

Sangeeta Banerji 1, Sandra Simon 1, Andreas Tille 2, Angelika Fruth 1, Antje Flieger 1,
PMCID: PMC7316794  PMID: 32587325

Correction to: Scientific Reports 10.1038/s41598-020-61254-1, published online 9 March 2020

This Article contains errors in Table 1, where the data for the rows 'Paratyphi C' and 'Poano' have been omitted. The correct Table 1 appears below.

Table 1.

Overview of serotype prediction with SeqSero and MLST.

Serotype Sequenced isolates Correlation Ambiguous Prediction failure Miscorrelation
Seq-Sero MLST Seq-Sero + MLST Seq-Sero MLST Seq-Sero + MLST Seq-Sero MLST Seq-Sero + MLST Seq-Sero MLST Seq-Sero + MLST
Agona 3 3 3 3 0 0 0 0 0 0 0 0 0
Choleraesuis 33 0 33 33 30 or Typhisuis or Paratyphi C 0 0 3 0 0 0 0 0
Choleraesuis monophasic 3 0 0 0 0 0 0 0 0 0 3 3 3
Derby 55 55 55 55 0 0 0 0 0 0 0 0 0
11:z41:e,n,z15 (novel serovar) 10 10 10 10 0 0 0 0 0 0 0 0 0
Enteritidis 115 115 115 115 0 0 0 0 0 0 0 0 0
Infantis 50 49 50 50 0 0 0 1 0 0 0 0 0
Kentucky 7 7 7 7 0 0 0 0 0 0 0 0 0
Kintambo 3 0 3 3 3 or Washington 0 0 0 0 0 0 0 0
Kottbus 12 0 12 12 12 or Ferruch 0 0 0 0 0 0 0 0
Mbandaka 15 15 15 15 0 0 0 0 0 0 0 0 0
Mikawasima 10 10 10 10 0 0 0 0 0 0 0 0 0
Muenchen 25 0 25 25 25 or Virginia 0 0 0 0 0 0 0 0
Paratyphi B 6 6 6 6 0 0 0 0 0 0 0 0 0
Paratyphi B monophasic 1 1 1 1 0 0 0 0 0 0 0 0 0
Paratyphi C 2 0 2 2 2 or Cholerae-suis or Typhisuis 0 0 0 0 0 0 0 0
Poano 2 2 2 2 0 0 0 0 0 0 0 0 0
Strathcona 2 2 2 2 0 0 0 0 0 0 0 0 0
Stourbridge 14 14 14 14 0 0 0 0 0 0 0 0 0
Sundsvall 1 0 1 1 1 or Soahanina or Sundvall 0 0 0 0 0 0 0 0
Typhi 74 74 74 74 0 0 0 0 0 0 0 0 0
Typhimurium biphasic 52 52 32 52 0 0 0 0 0 0 0 20 0
Typhimurium monophasic 19 17 17 19 0 0 0 0 0 0 2 2 0
Serologically rough 6 5 6 6 0 0 0 1 0 0 0 0 0
Total number 520 437 495 517 73 0 0 5 0 0 5 25 3
Total (%) 100.0 84.0 95.2 99.4 14.0 0 0 1.0 0 0 1.0 4.8 0.6
Overall (%) 100.0 98.0 95.2 99.4 1.0 0 0 1.0 4.8 0.6

Serotype was first determined by classical serotyping. Whole genome sequences were then analyzed with SeqSero or MLST. Correlation means that the predicted serotype was the same as the classically determined serovar. Ambiguous means that the correct serotype was listed among others. Prediction failure means that no complete antigenic formula was derived. Miscorrelation means that a wrong antigenic formula was derived. Overall (%) is the sum of Ambiguous (%) and Correlation (%). Final results are shown, i.e. after resequencing if data quality was not met.

The Supplementary file that accompanies this Article also contains an error in which Supplementary Table S1 is missing. The correct Supplementary Table S1 appears below as Table 2.

Table 2.

Overview of NRC dataset for the study Banerji et al.: ‘Genome-based Salmonella serotyping as the new Gold Standard’.

ENA run number Source Year of isolation Country of isolation Serovar ENA project
ERR3263618 Human 2009 Germany S. Infantis PRJEB30317
ERR3263619 Human 2009 Germany S. Infantis PRJEB30317
ERR3263620 Human 2009 Germany S. Infantis PRJEB30317
ERR3263621 Human 2001 Germany S. Sundsvall PRJEB30317
ERR3263622 Meat 2004 Germany S. Derby PRJEB30317
ERR3263623 Human 2006 Germany S. Typhimurium mono PRJEB30317
ERR3263624 Human 2007 Germany S. Kintambo PRJEB30317
ERR3263625 Human 2007 Germany S. Derby PRJEB30317
ERR3263626 Human 2007 Germany S. Poano PRJEB30317
ERR3263627 Human 2007 Germany S. Derby PRJEB30317
ERR3263628 Human 2007 Germany S. Derby PRJEB30317
ERR3263629 Human 2007 Germany S. Derby PRJEB30317
ERR3263630 Human 2008 Germany S. Derby PRJEB30317
ERR3263631 Human 2009 Germany S. Kintambo PRJEB30317
ERR3263632 Human 2011 Germany S. Kintambo PRJEB30317
ERR3263633 Human 2011 Germany S. Poano PRJEB30317
ERR3263634 Meat 2012 Germany S. Derby PRJEB30317
ERR3263635 Human 2012 Germany S. Derby PRJEB30317
ERR3263636 Human 2012 Germany S. Derby PRJEB30317
ERR3263637 Human 2012 Germany S. Derby PRJEB30317
ERR3263638 Poultry 2012 Germany S. Derby PRJEB30317
ERR3263639 Human 2012 Germany S. Derby PRJEB30317
ERR3263640 Human 2013 Germany S. Infantis PRJEB30317
ERR3263641 Human 2013 Germany S. Infantis PRJEB30317
ERR3263642 Cattle 2013 Germany S. Infantis PRJEB30317
ERR3263643 Human 2013 Germany S. Derby PRJEB30317
ERR3263644 Human 2013 Germany S. Muenchen PRJEB30317
ERR3263645 Human 2013 Germany S. Muenchen PRJEB30317
ERR3263646 Meat 2013 Germany S. Muenchen PRJEB30317
ERR3263647 Human 2013 Germany S. Muenchen PRJEB30317
ERR3263648 Human 2013 Germany S. Muenchen PRJEB30317
ERR3263649 Pig 2013 Germany S. Muenchen PRJEB30317
ERR3263650 Pig 2013 Germany S. Muenchen PRJEB30317
ERR3263651 Human 2013 Germany S. Derby PRJEB30317
ERR3263652 Human 2013 Germany S. Derby PRJEB30317
ERR3263653 Human 2013 Germany S. Derby PRJEB30317
ERR3263654 Human 2013 Germany S. Derby PRJEB30317
ERR3263655 Human 2013 Germany S. Derby PRJEB30317
ERR3263656 Human 2014 Germany S. Derby PRJEB30317
ERR3263657 Human 2014 Germany S. Derby PRJEB30317
ERR3263658 Human 2014 Germany S. Derby PRJEB30317
ERR3263659 Human 2014 Germany S. Derby PRJEB30317
ERR3263660 Human 2014 Germany S. Derby PRJEB30317
ERR3263661 Human 2014 Germany S. Derby PRJEB30317
ERR3263662 Human 2014 Germany S. Derby PRJEB30317
ERR3263663 Human 2014 Germany S. Derby PRJEB30317
ERR3263664 Human 2014 Germany S. Derby PRJEB30317
ERR3263665 Human 2014 Germany S. Derby PRJEB30317
ERR3263666 Human 2014 Germany S. Derby PRJEB30317
ERR3263667 Human 2014 Germany S. Derby PRJEB30317
ERR3263668 Human 2014 Germany S. Derby PRJEB30317
ERR3263669 Human 2014 Germany S. Derby PRJEB30317
ERR3263670 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263671 Human 2014 Germany S. Derby PRJEB30317
ERR3263672 Human 2014 Germany S. Derby PRJEB30317
ERR3263673 Human 2014 Germany S. Derby PRJEB30317
ERR3263674 Human 2014 Germany S. Derby PRJEB30317
ERR3263675 Human 2014 Germany S. Derby PRJEB30317
ERR3263676 Human 2014 Germany S. Derby PRJEB30317
ERR3263677 Human 2014 Germany S. Derby PRJEB30317
ERR3263678 Human 2014 Germany S. Derby PRJEB30317
ERR3263679 Human 2014 Germany S. Derby PRJEB30317
ERR3263680 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263681 Human 2014 Germany S. Derby PRJEB30317
ERR3263682 Human 2014 Germany S. Derby PRJEB30317
ERR3263683 Human 2014 Germany S. Derby PRJEB30317
ERR3263684 Human 2014 Germany S. Derby PRJEB30317
ERR3263685 Human 2014 Germany S. Derby PRJEB30317
ERR3263686 Human 2014 Germany S. Derby PRJEB30317
ERR3263687 Human 2014 Germany S. Derby PRJEB30317
ERR3263688 Human 2014 Germany S. Derby PRJEB30317
ERR3263689 Human 2014 Germany S. Derby PRJEB30317
ERR3263690 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263691 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263692 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263693 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263694 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263695 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263696 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263697 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263698 Meat 2014 Germany S. Muenchen PRJEB30317
ERR3263699 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263700 Meat 2014 Germany S. Muenchen PRJEB30317
ERR3263701 Meat 2014 Germany S. Muenchen PRJEB30317
ERR3263702 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263703 Pig 2014 Germany S. Muenchen PRJEB30317
ERR3263704 Pig 2014 Germany S. Muenchen PRJEB30317
ERR3263705 Human 2014 Germany S. Muenchen PRJEB30317
ERR3263706 Human 2014 Germany S. Infantis PRJEB30317
ERR3263707 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263708 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263709 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263710 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263711 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263712 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263713 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263714 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263715 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263716 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263717 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263718 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263719 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263720 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263721 Human 2014 Germany S. Enteritidis PRJEB30317
ERR3263722 Human 2015 Germany S. Typhi PRJEB30317
ERR3263723 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263724 Human 2015 Germany S. Typhi PRJEB30317
ERR3263725 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263726 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263727 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263728 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263729 Human 2015 Germany S. Typhi PRJEB30317
ERR3263730 Human 2015 Germany S. Typhi PRJEB30317
ERR3263731 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263732 Human 2015 Germany S. Typhi PRJEB30317
ERR3263733 Human 2015 Germany S. Typhi PRJEB30317
ERR3263734 Human 2015 Germany S. Typhi PRJEB30317
ERR3263735 Human 2015 Germany S. Typhi PRJEB30317
ERR3263736 Human 2015 Germany S. Typhi PRJEB30317
ERR3263737 Human 2015 Germany S. Typhi PRJEB30317
ERR3263738 Not provided 2015 Germany S. Typhi PRJEB30317
ERR3263739 Human 2015 Germany S. Typhi PRJEB30317
ERR3263740 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263741 Human 2015 Germany S. Typhi PRJEB30317
ERR3263742 Human 2015 Germany S. Typhi PRJEB30317
ERR3263743 Not provided 2015 Germany S. Typhi PRJEB30317
ERR3263744 Human 2015 Germany S. Typhi PRJEB30317
ERR3263745 Human 2015 Germany S. Typhi PRJEB30317
ERR3263746 Human 2015 Germany S. Typhi PRJEB30317
ERR3263747 Human 2015 Germany S. Typhi PRJEB30317
ERR3263748 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263749 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263750 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263751 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263752 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263753 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263754 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263755 Human 2015 Germany S. Typhi PRJEB30317
ERR3263756 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263757 Human 2015 Germany S. Stourbridge PRJEB30317
ERR3263758 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263759 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263760 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263761 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263762 Human 2015 Germany S. Typhi PRJEB30317
ERR3263763 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263764 Human 2015 Germany S. Typhi PRJEB30317
ERR3263765 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263766 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263767 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263768 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263769 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263770 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263771 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263772 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263773 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263774 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263775 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263776 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263777 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263778 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263779 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263780 Poultry 2015 Germany S. Enteritidis PRJEB30317
ERR3263781 Poultry 2015 Germany S. Enteritidis PRJEB30317
ERR3263782 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263783 Layer eggs 2015 Germany S. Enteritidis PRJEB30317
ERR3263784 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263785 Human 2015 Germany S. Typhi PRJEB30317
ERR3263786 Human 2015 Germany S. Paratyphi B PRJEB30317
ERR3263787 Human 2015 Germany S. Typhi PRJEB30317
ERR3263788 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263789 Human 2015 Germany S. Paratyphi B PRJEB30317
ERR3263790 Human 2015 Germany S. Typhi PRJEB30317
ERR3263791 Human 2015 Germany S. Typhi PRJEB30317
ERR3263792 Human 2015 Germany S. Typhi PRJEB30317
ERR3263793 Human 2015 Germany S. Infantis PRJEB30317
ERR3263794 Human 2015 Germany S. Paratyphi B PRJEB30317
ERR3263795 Human 2015 Germany S. Typhi PRJEB30317
ERR3263796 Human 2015 Germany S. Typhi PRJEB30317
ERR3263797 Human 2015 Germany S. Typhi PRJEB30317
ERR3263798 Human 2015 Germany S. Typhi PRJEB30317
ERR3263799 Human 2015 Germany S. Typhi PRJEB30317
ERR3263800 Human 2015 Germany S. Typhi PRJEB30317
ERR3263801 Human 2015 Germany S. Typhi PRJEB30317
ERR3263802 Human 2015 Germany S. Typhi PRJEB30317
ERR3263803 Human 2015 Germany S. Typhi PRJEB30317
ERR3263804 Human 2015 Germany S. Typhi PRJEB30317
ERR3263805 Human 2015 Germany S. Typhi PRJEB30317
ERR3263806 Human 2015 Germany S. Stourbridge PRJEB30317
ERR3263807 Human 2015 Germany S. Typhi PRJEB30317
ERR3263808 Human 2015 Germany S. Typhi PRJEB30317
ERR3263809 Human 2015 Germany S. Enteritidis PRJEB30317
ERR3263810 Human 2015 Germany S. Infantis PRJEB30317
ERR3263811 Human 2015 Germany S. Infantis PRJEB30317
ERR3263812 Human 2015 Germany S. Infantis PRJEB30317
ERR3263813 Human 2016 Germany S. Typhi PRJEB30317
ERR3263814 Human 2018 Germany S. Typhimurium PRJEB30317
ERR3263815 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263816 Poultry 2016 Germany S. Infantis PRJEB30317
ERR3263817 Human 2016 Germany S. Paratyphi B PRJEB30317
ERR3263818 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263819 Human 2016 Germany S. Typhi PRJEB30317
ERR3263820 Human 2016 Germany S. Typhi PRJEB30317
ERR3263821 Human 2016 Germany S. Typhi PRJEB30317
ERR3263822 Human 2016 Germany S. Infantis PRJEB30317
ERR3263823 Human 2016 Germany S. Infantis PRJEB30317
ERR3263824 Human 2016 Germany S. Infantis PRJEB30317
ERR3263825 Human 2016 Germany S. Infantis PRJEB30317
ERR3263826 Human 2016 Germany S. Infantis PRJEB30317
ERR3263827 Cattle 2016 Germany S. Infantis PRJEB30317
ERR3263828 Cattle 2016 Germany S. Infantis PRJEB30317
ERR3263829 Human 2016 Germany S. Typhi PRJEB30317
ERR3263830 Human 2016 Germany S. Infantis PRJEB30317
ERR3263831 Pigeon 2016 Germany S. Infantis PRJEB30317
ERR3263832 Human 2016 Germany S. Infantis PRJEB30317
ERR3263833 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263834 Human 2016 Germany S. Paratyphi B PRJEB30317
ERR3263835 Human 2016 Germany S. Typhi PRJEB30317
ERR3263836 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263837 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263838 Human 2016 Germany S. Typhi PRJEB30317
ERR3263839 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263840 Feed 2016 Germany S. Mbandaka PRJEB30317
ERR3263841 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263842 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263843 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263844 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263845 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263846 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263847 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263848 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263849 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263850 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263851 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263852 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263853 Human 2016 Germany S. Mbandaka PRJEB30317
ERR3263854 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263855 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263856 Layer eggs 2016 Germany S. Enteritidis PRJEB30317
ERR3263857 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263858 Human 2016 Germany S. Typhi PRJEB30317
ERR3263859 Human 2016 Germany S. Typhi PRJEB30317
ERR3263860 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263861 Human 2016 Germany S. Typhi PRJEB30317
ERR3263862 Human 2016 Germany S. Typhi PRJEB30317
ERR3263863 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263864 Human 2016 Germany S. Typhi PRJEB30317
ERR3263865 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263866 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263867 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263868 Human 2016 Germany S. Paratyphi B PRJEB30317
ERR3263869 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263870 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263871 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263872 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263873 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263874 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263875 Human 2016 Germany S. ssp.I serol. Rough PRJEB30317
ERR3263876 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263877 Human 2016 Germany S. Typhi PRJEB30317
ERR3263878 Human 2016 Germany S. Typhi PRJEB30317
ERR3263879 Human 2016 Germany S. Typhi PRJEB30317
ERR3263880 Human 2016 Germany S. ssp.I serol. Rough PRJEB30317
ERR3263881 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263882 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263883 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263884 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263885 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263886 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263887 Human 2016 Germany S. Typhi PRJEB30317
ERR3263888 Not proviede 2016 Germany S. Typhi PRJEB30317
ERR3263889 Human 2016 Germany S. ssp. serol. Rough PRJEB30317
ERR3263890 Human 2016 Germany S. Infantis PRJEB30317
ERR3263891 Human 2016 Germany S. Enterititdis PRJEB30317
ERR3263892 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263893 Poultry 2016 Germany S. ssp.I serol. Rough PRJEB30317
ERR3263894 Human 2016 Germany S. ssp.II serol. Rough PRJEB30317
ERR3263895 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263896 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263897 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263898 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263899 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263900 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263901 Human 2016 Germany S. Paratyphi B PRJEB30317
ERR3263902 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263903 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263904 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263905 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263906 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263907 Human 2016 Germany S. Stourbridge PRJEB30317
ERR3263908 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263909 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263910 Human 2016 Germany S. Stourbridge PRJEB30317
ERR3263911 Human 2016 Germany S. Stourbridge PRJEB30317
ERR3263912 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263913 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263914 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263915 Human 2016 Germany S. Typhi PRJEB30317
ERR3263916 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263917 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263918 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263919 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263920 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263921 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263922 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263923 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263924 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263925 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263926 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263927 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263928 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263929 Human 2016 Germany S. Typhi PRJEB30317
ERR3263930 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263931 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263932 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263933 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263934 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263935 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263936 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263937 Human 2016 Germany S. Infantis PRJEB30317
ERR3263938 Human 2016 Germany S. Stourbridge PRJEB30317
ERR3263939 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263940 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263941 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263942 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263943 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263944 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263945 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3263946 Human 2016 Germany S. Infantis PRJEB30317
ERR3263947 Human 2016 Germany S. Infantis PRJEB30317
ERR3263948 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263949 Human 2016 Germany S. Typhi PRJEB30317
ERR3263950 Human 2016 Germany S. Infantis PRJEB30317
ERR3263951 Human 2016 Germany S. Typhi PRJEB30317
ERR3263952 Human 2016 Germany S. Typhi PRJEB30317
ERR3263953 Human 2016 Germany S. Kentucky PRJEB30317
ERR3263954 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263955 Human 2016 Germany S. Infantis PRJEB30317
ERR3263956 Human 2016 Germany S. Infantis PRJEB30317
ERR3263957 Human 2016 Germany S. Infantis PRJEB30317
ERR3263958 Human 2016 Germany S. Infantis PRJEB30317
ERR3263959 Human 2016 Germany S. Infantis PRJEB30317
ERR3263960 Human 2016 Germany S. Infantis PRJEB30317
ERR3263961 Human 2016 Germany S. Stourbridge PRJEB30317
ERR3263962 Human 2016 Germany S. Typhi PRJEB30317
ERR3263963 Human 2016 Germany S. Stourbridge PRJEB30317
ERR3263964 Human 2016 Germany S. Typhi PRJEB30317
ERR3263965 Human 2016 Germany S. Infantis PRJEB30317
ERR3263966 Human 2016 Germany S. Infantis PRJEB30317
ERR3263967 Human 2016 Germany S. Infantis PRJEB30317
ERR3263968 Human 2016 Germany S. Infantis PRJEB30317
ERR3263969 Human 2016 Germany S. Infantis PRJEB30317
ERR3263970 Human 2016 Germany S. Infantis PRJEB30317
ERR3263971 Human 2016 Germany S. Stourbridge PRJEB30317
ERR3263972 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263973 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263974 Human 2016 Germany S. Infantis PRJEB30317
ERR3263975 Human 2016 Germany S. Typhi PRJEB30317
ERR3263976 Human 2016 Germany S. Typhi PRJEB30317
ERR3263977 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263978 Human 2016 Germany S. Stourbridge PRJEB30317
ERR3263979 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3263980 Human 2016 Germany S. Kentucky PRJEB30317
ERR3263981 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263982 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263983 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263984 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263985 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263986 Human 2016 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3263987 Human 2016 Germany S. Typhi PRJEB30317
ERR3263988 Human 2016 Germany S. Typhi PRJEB30317
ERR3263989 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263990 Human 2016 Germany S. Infantis PRJEB30317
ERR3263991 Human 2016 Germany S. Infantis PRJEB30317
ERR3263992 Human 2016 Germany S. Infantis PRJEB30317
ERR3263993 Human 2016 Germany S. Typhi PRJEB30317
ERR3263994 Human 2016 Germany S. Typhi PRJEB30317
ERR3263995 Human 2016 Germany S. Typhi PRJEB30317
ERR3263996 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263997 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263998 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3263999 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3264000 Human 2016 Germany S. Typhi PRJEB30317
ERR3264001 Human 2016 Germany S. Choleraesuis var. Kunzendorf (mono) PRJEB30317
ERR3264002 Human 2016 Germany S. Enteritidis PRJEB30317
ERR3264003 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3264004 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3264005 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3264006 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3264007 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3264008 Human 2016 Germany S. Typhimurium PRJEB30317
ERR3264009 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3264010 Human 2018 Germany S. Typhi PRJEB30317
ERR3264011 Human 2016 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264012 Human 2016 Germany S. Typhi PRJEB30317
ERR3264013 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3264014 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3264015 Human 2016 Germany S. Choleraesuis PRJEB30317
ERR3264016 Human 2017 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264017 Human 2017 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264018 Human 2017 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264019 Human 2017 Germany S. Choleraesuis PRJEB30317
ERR3264020 Human 2017 Germany S. Choleraesuis PRJEB30317
ERR3264022 Human 2017 Germany S. Paratyphi C PRJEB30317
ERR3264023 Human 2017 Germany S. Choleraesuis PRJEB30317
ERR3264024 Human 2017 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264025 Human 2017 Germany S. Choleraesuis PRJEB30317
ERR3264026 Human 2017 Germany S. Choleraesuis var. Kunzendorf (mono) PRJEB30317
ERR3264027 Human 2017 Germany S. Stourbridge PRJEB30317
ERR3264028 Human 2017 Germany S. Stourbridge PRJEB30317
ERR3264029 Human 2017 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264030 Human 2017 Germany S. Choleraesuis PRJEB30317
ERR3264031 Human 2017 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264032 Human 2017 Germany S. Stourbridge PRJEB30317
ERR3264033 Human 2017 Germany S. Choleraesuis PRJEB30317
ERR3264034 Human 2017 Germany S. Paratyphi C PRJEB30317
ERR3264035 Human 2017 Germany S. Choleraesuis var. Kunzendorf (mono) PRJEB30317
ERR3264036 Human 2017 Germany S. ssp. serol. Rough PRJEB30317
ERR3264037 Human 2017 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264038 Human 2017 Germany S. Choleraesuis PRJEB30317
ERR3264039 Human 2017 Germany S. Stourbridge PRJEB30317
ERR3264040 Human 2017 Germany S. enterica 11:z41:e,n,z15 PRJEB30317
ERR3264041 Human 2017 Germany S. Kentucky PRJEB30317
ERR3264042 Human 2017 Germany S. Kentucky PRJEB30317
ERR3264043 Human 2017 Germany S. Kentucky PRJEB30317
ERR3264044 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264045 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264046 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264047 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264048 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264049 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264050 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264051 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264052 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264053 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264054 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264055 Human 2017 Germany S. Kentucky PRJEB30317
ERR3264056 Human 2017 Germany S. Kottbus PRJEB30317
ERR3264057 Human 2017 Germany S. Agona PRJEB30317
ERR3264058 Human 2017 Germany S. Choleraesuis PRJEB30317
ERR3264059 Human 2017 Germany S. Agona PRJEB30317
ERR3264060 Human 2017 Germany S. Kentucky PRJEB30317
ERR3264062 Human 2018 Germany S. Enteritidis PRJEB30317
ERR3264063 Human 2018 Germany S. Choleraesuis PRJEB30317
ERR3264064 Human 2018 Germany S. Choleraesuis PRJEB30317
ERR3264065 Human 2018 Germany S. Choleraesuis PRJEB30317
ERR3264066 Human 2018 Germany S. Choleraesuis PRJEB30317
ERR3264067 Human 2018 Germany S. Choleraesuis PRJEB30317
ERR3264068 Human 2018 Germany S. Agona PRJEB30317
ERR3264069 Human 2018 Germany S. Derby PRJEB30317
ERR3264070 Human 2018 Germany S. Derby PRJEB30317
ERR3264071 Human 2018 Germany S. Derby PRJEB30317
ERR3264072 Human 2018 Germany S. Derby PRJEB30317
ERR3264073 Human 2018 Germany S. Derby PRJEB30317
ERR3264074 Human 2017 Germany S. Enteritidis PRJEB30317
ERR3264075 Human 2018 Germany S. Infantis PRJEB30317
ERR3264076 Human 2018 Germany S. Infantis PRJEB30317
ERR3264077 Human 2018 Germany S. Infantis PRJEB30317
ERR3264078 Human 2018 Germany S. Infantis PRJEB30317
ERR3264079 Human 2018 Germany S. Infantis PRJEB30317
ERR3264080 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264081 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264082 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264083 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264084 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264085 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264086 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264087 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264088 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264089 Human 2018 Germany S. Typhimurium PRJEB30317
ERR3264090 Human 2018 Germany S. Mikawasima PRJEB30317
ERR3264091 Human 2018 Germany S. Infantis PRJEB30317
ERR3264092 Human 2018 Germany S. Infantis PRJEB30317
ERR3264021 Human 2018 Germany S. Strathcona PRJEB30317
ERR3264061 Human 2018 Germany S. Strathcona PRJEB30317
ERR2003327 Human 2000 Germany S. Typhimurium mono PRJEB16326
ERR2003328 Human 2001 Germany S. Typhimurium mono PRJEB16326
ERR2003329 Human 2001 Germany S. Typhimurium mono PRJEB16326
ERR2003330 Pigs 2002 Germany S. Typhimurium mono PRJEB16326
ERR2003331 Human 2002 Germany S. Typhimurium mono PRJEB16326
ERR2003332 Pigs 2003 Germany S. Typhimurium mono PRJEB16326
ERR2003341 Human 2004 Germany S. Typhimurium PRJEB16326
ERR2003333 Pigs 2004 Germany S. Typhimurium mono PRJEB16326
ERR2003334 Human 2004 Germany S. Typhimurium mono PRJEB16326
ERR2003335 Cattle 2005 Germany S. Typhimurium mono PRJEB16326
ERR2099818 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2099823 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2099820 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2099822 Pigs 2016 Germany S. Typhimurium PRJEB16326
ERR1912198 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003365 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003364 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003363 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003362 Pigs 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003361 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003360 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003359 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003358 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003357 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003356 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003355 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003354 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003353 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003352 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003351 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003350 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003349 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003348 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003347 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003346 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003345 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003344 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003343 Human 2016 Germany S. Typhimurium PRJEB16326
ERR2003342 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR1950104 Human 2016 Germany S. Typhimurium mono PRJEB16326
ERR2003340 Human 1997 Germany S. Typhimurium PRJEB16326
ERR2003336 Human 1997 Germany S. Typhimurium PRJEB16326
ERR2003337 Human 1997 Germany S. Typhimurium PRJEB16326
ERR2003338 Human 1997 Germany S. Typhimurium PRJEB16326
ERR2003339 Human 1997 Germany S. Typhimurium PRJEB16326

The dataset consists of 520 whole genome sequences, which have been submitted to ENA.


Articles from Scientific Reports are provided here courtesy of Nature Publishing Group

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