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. 2020 Jun 26;15(6):e0235381. doi: 10.1371/journal.pone.0235381

Safety and efficacy of N-acetylcysteine in hospitalized patients with HIV-associated tuberculosis: An open-label, randomized, phase II trial (RIPENACTB Study)

Izabella Picinin Safe 1,2, Marcus Vinícius Guimarães Lacerda 1,2,3,*, Vitoria Silva Printes 1, Adriana Ferreira Praia Marins 1, Amanda Lia Rebelo Rabelo 2, Amanda Araújo Costa 1, Michel Araújo Tavares 4, Jaquelane Silva Jesus 1, Alexandra Brito Souza 2, Francisco Beraldi-Magalhães 2, Cynthia Pessoa Neves 1,2, Wuelton Marcelo Monteiro 1,2, Vanderson Souza Sampaio 1,2, Eduardo P Amaral 5, Renata Spener Gomes 2, Bruno B Andrade 6,7,8,9,10,11,12,#, Marcelo Cordeiro-Santos 1,2,#
Editor: Delia Goletti13
PMCID: PMC7319340  PMID: 32589648

Abstract

Despite the availability of effective antimicrobials, tuberculosis (TB) is still a serious health threat. Mortality is even higher in people living with HIV who are diagnosed with TB. New therapies are needed to shorten the time required to cure TB and decrease fatality rates in this population. N-acetylcysteine (NAC) is a glutathione precursor and has shown recently in experimental setting to present in vitro and in vivo anti-mycobacterial activity. We test the hypothesis that NAC is safe, well tolerated and secondarily efficacious as adjunctive anti-TB therapy in hospitalized individuals with HIV-associated TB. Patients were enrolled sequentially in a tertiary care center, in the Brazilian Amazon. We performed a randomized, parallel group, single-center, open study trial of two arms, in hospitalized patients over 18 years of age, with microbiologically confirmed pulmonary TB in HIV: one with rifampicin, isoniazid, pyrazinamide and ethambutol at standard doses (Control Group), and a second in which NAC 600 mg bid for eight weeks was added (NAC Group). A total of 21 and 18 patients were enrolled to the Control Group and NAC Group, respectively. Adverse event rates were similar in the two arms. Our findings suggest that in the more critical population of hospitalized patients with HIV-associated TB, the use of NAC was not unsafe, despite the low sample size, and a potential impact on faster negative cultures needs to be further explored in larger studies.

Introduction

Worldwide, tuberculosis (TB) is one of the top 10 causes of death. Despite significant efforts to control the disease, World Health Organization (WHO) estimates that 250,000 people living with HIV died in 2018 due to TB [1]. Treatment scheme of TB in people with HIV is the same as in HIV-negative patients. The recommended regimen for drug-susceptible disease is a combination of Rifampicin, Isoniazid, Pyrazinamide, Ethambutol (RIPE) for 2 months, followed by at least 4 months of rifampicin and isoniazid [2]. Although it is a curable and treatable disease, TB is the leading cause of death (40%), admission to hospital (18%), and in-hospital death (25%) in people living with HIV (PLWH) [3,4].

Glutathione (GSH) is the main nonprotein thiol responsible for cellular homeostasis and maintenance of the cellular redox balance [5]. HIV infection is associated with increased oxidative stress (OS). Intracellular GSH levels in macrophages of HIV individuals are compromised, contributing to the loss of innate immune function observed in these patients and an increase in the growth of Mycobacterium tuberculosis (Mtb) [6]. Agents that assist in the restoration of GSH levels in macrophages isolated from individuals with HIV infection promote better control of Mtb [7]. N-acetylcysteine (NAC), a GSH precursor, is an agent that restores GSH levels. T lymphocytes derived from HIV infected individuals are deficient in GSH, and this deficiency correlates with decreased levels of Th1 cytokines and enhanced growth of Mtb inside human macrophages [8]. NAC was shown to tailor macrophages to induce enhanced Th1 response that may be helpful to control TB [9].

NAC is included in the list of essential medicines of WHO [10]. It is widely used in patients with a wide range of respiratory diseases due to its mucolytic and anti-oxidant activities, making it attractive as a potential chronic obstructive pulmonary disease therapy [11]. NAC potentially protects against anti-TB drug-induced hepatotoxicity in individuals with TB without HIV [12]. NAC treatment in Mtb-infected human macrophages resulted in a decrease of oxidative stress and enhanced anti-mycobacterial activity [13]. In a model of Mtb infection of mice, NAC treatment resulted in diminished mycobacterial loads in lungs [13], highlighting the therapeutic potential of this drug.

NAC as an adjuvant appears to be an effective agent in terms of early bacteriological and radiological improvement in treatment of pulmonary TB [14]. However, to our knowledge, no evidence exists for patients with HIV-associated TB, and especially in those more complicated cases requiring hospitalization. Such clinical trial play innovative and strategic role in WHO New Global Elimination Tuberculosis Strategy (Pillar III research strategy) [15].

Methods

Ethics

The study was approved by the Ethics Review Committee of Fundação de Medicina Tropical Dr Heitor Vieira Dourado (CAAE 60219916.5.0000.0005). Written informed consent was obtained from all participants (or relatives in case of unconscious patients), after detailed information about the study protocol was given.

Study design

RIPENACTB Study was an open-label, single center, randomized, phase II trial to test whether NAC-containing treatment regimen was as safe as the standard regimen for TB treatment in hospitalized patients with HIV, besides exploring efficacy upon respiratory sample culture conversion. The study was conducted at Fundação de Medicina Tropical Dr Heitor Vieira Dourado (FMT-HVD), a tertiary care reference institution for coinfection TB/HIV in Manaus, Western Brazilian Amazon, from December 2016 to April 2018. This is a reference public institution for infectious diseases in the Amazonas State, with ~150 beds available for hospitalization and 7 intensive care unit (ICU) beds, where all cases of TB/HIV coinfection are referred to.

Study participants

Either gender 18 years or older patients with pulmonary TB diagnosed through positive Xpert-MTB/RIF and hospitalized (at clinician’s discretion) for more than 24 hours, were eligible to be included in the study. Patients without HIV, with extrapulmonary TB only, unable to collect respiratory sample, pregnant and lactating women, exposed to quinolones in the last 7 days, and in use of anti-TB drugs for more than 72 hours or in use of anti-TB drugs as second line drugs were not included in the study. Enrolled patients were subsequently excluded if their baseline culture failed to grow Mtb or grew a strain of Mtb that was resistant to any anti-TB drug.

For the sample size calculation, a percentage of 37.5% of hepatotoxicity among the RIPE group and no episodes for RIPENAC was considered [12]. A 1:1 ratio with a power of 80% and a significance level of 95% was used. A total sample size of 36 was estimated.

Randomization and study treatments

Patients were randomized into Control Group or NAC Group in a 1:1 ratio using a computer-generated randomization table. The groups received standard anti-TB treatment with RIPE (150 mg, 75 mg, 400 mg, 275 mg), fixed dose tablets combined according to weight, for eight weeks. RIPE was supplied by Farmanguinhos®, Rio de Janeiro, Brazil. In addition, NAC group received two effervescent tablets containing N-acetylcysteine (Fluimucil®) 600 mg bid, for eight weeks, following the same dose used in a preliminary study on the effect of NAC on TB [14]. Tablets were dissolved in water before oral ingestion or administration though the nasoenteral tube.

Patients and involved infectious disease physicians were aware of the treatments, except laboratory team, to whom the study was blinded. While hospitalized, all the medication was administered in a supervised way by the nursing team. After discharge, patients were asked to take anti-TB drugs accordingly, and NAC only until eight weeks was completed. During every visit to the clinics, patients were requested to bring medication packages for tablet counting, as a proxy of adherence. Adherence was considered low when patients did not take the medication for more than seven consecutive days. The study was registered at Clinicaltrials.gov. (https://clinicaltrials.gov/ct2/show/NCT03281226)

Study procedures

All participants underwent a baseline clinical evaluation, which included physical examination, sputum (spontaneous or induced whenever sputum production was considered insufficient) or tracheal aspirate in unconscious patients, CD4+ lymphocyte count, viral load, aspartate aminotransferase (AST), alanine aminotransferase (ALT), bilirubins, screening of concomitant drug exposures and chest radiograph. Safety assessments were performed at baseline and weeks 1, 2, 4, 6 and 8. Additional exams were solicited whenever needed.

Respiratory samples were submitted to smear Ziehl–Nielsen staining technique, Xpert-MTB/RIF for Mtb, and sown in liquid culture BACTEC MGIT™ 960 and solid culture Löwenstein-Jensen. Xpert-MTB/RIF for Mtb, even being more expensive, was used as inclusion criterion because of its higher sensitivity [16].

Study outcomes

The primary endpoint was clinical and laboratorial safety, and tolerability. Radiology alterations recovery, respiratory specimen culture conversion rate on liquid and solid media at the end of eight weeks of treatment were secondary endpoints.

Definitions

Culture conversion and rate of culture conversion

We defined culture conversion as the first negative respiratory sample (sputum or tracheal aspirate) cultures on liquid or solid media, without an intervening positive culture. Negative cultures followed by contaminated cultures were also regarded as culture conversion. Culture conversion was also defined as a case where the participant could not expectorate after one negative sputum culture. The rate of culture conversion was defined as the time elapsed from day 1 to the first negative culture [17].

Radiology assessment

Chest radiography was performed at baseline and week 8. Comparative assessment was performed by a single specialist in radiology, blinded to the group of enrollment, which evaluated both exams and classified them as: (1) improvement or no change, or (2) worsening.

Hepatotoxicity

Hepatotoxicity was defined as ALT and/or AST increased more than 3 times the upper limit of normal range with the presence of hepatitis symptoms, or increased up to 5 times the upper limit of normal range in the absence of symptoms or total levels of bilirubinemia greater than twice the upper normal limit, as described elsewhere [12]. Reference values adopted were 38 UI/mL (AST), 44 UI/mL (ALT) and 1.3 mg/dL (bilirubins). All patients were tested for HBsAg and anti-HCV.

Adverse events

Adverse events were graded according to the modified toxicity events criteria of the National Institute of Allergy and Infectious Diseases, Division of AIDS (DAIDS) Table for Grading the Severity of Adult and Pediatric Adverse Event (Corrected Version 2.1, July 2017) [18].

Statistical analysis

All analyses were performed according to the intention-to-treat principle. Differences in categorical variables were tested using Fisher’s exact test. Univariate log-binomial generalized linear regression with respective 95% confidence intervals (CI) was used to estimate relative risks (RR) in order to assess associations with the major outcomes of the study. P-values < .05 were considered statistically significant. The statistical analyses were performed using Stata 13.0.

Results

Between December 2016 and April 2018, 162 participants were assessed for eligibility, and 50 underwent randomization (Fig 1). Out of those, 21 were included in the Control Group and 18 in the NAC Group. Demographic and clinical characteristics of participants were similar between the study arms, except that more males were included in the control arm (Table 1). Overall, most of the included patients had CD4+ lymphocyte counts under 200 cells/mm3. Overall, TB resistance was seen in 5 out of 50 enrolled patients (10%). Geometric means of viral load in the control group was 4.133 copies/mL and in the NAC group 4.569 copies/mL.

Fig 1. Flowchart of eligible, randomized and enrolled patients in the study.

Fig 1

Table 1. Baseline characteristics of patients enrolled in both groups.

Characteristic Control Group (n = 21) NAC Group (n = 18) P-value
n (%) n (%)
Male sex 19 (90.5) 10 (55.6) .025
Age group, in years     .972
<25 4 (19.1) 4 (22.2)
25–34 6 (28.6) 4 (22.2)
35–45 8 (38.1) 7 (38.9)
>45 3 (14.3) 3 (16.7)
CD4+ lymphocyte count     .336
<50 cells/mm3 6 (28.6) 9 (50)
50–199 cells/mm3 12 (57.1) 8 (44.4)
≥200 cells/mm3 3 (14.3) 1 (5.6)
Viral load     .873
≤ 400 copies/mL 5 (23.8) 4 (22.2)
401–3,000 copies/mL 1 (4.8) 1 (5.6)
3,001–10,000 copies/mL 1 (4.8) 0 (0.0)
10,001–100,000 copies/mL 3 (14.3) 4 (22.2)
>100,000 copies/mL 11 (52.4) 9 (50)
Hemoglobin<8g/dL 4 (19.1) 5 (27.8) .706
Albumin≤2.7mg/dL 4 (19.1) 8 (44.5) .163
Time between TB diagnosis and ART in naïve patients     .549
< 2 weeks 5 (55.6) 4 (50)
2 weeks—8 weeks 3 (33.3) 4 (50)
> 8 weeks 1 (11.1) 0 (0.0)
Concurrent opportunistic infection     .196
No 16 (76.2) 10 (55.6)
Yes 5 (23.8) 8 (44.4)
Concurrent extrapulmonary TB 14 (66.7) 11 (61.1) .750
Disseminated TB (≥2 sites) 3 (14.3) 4 (22.2) .683
Years since HIV diagnosis     .471
<1 year 15 (83.4) 13 (62)
>1 year 8 (38.1) 3 (16.7)
ICU hospitalization at enrollment 4 (19.1) 0 (0.0) . . .

ART: antiretroviral therapy

As per protocol, no patient in the NAC Group had low adherence to NAC. Table 2 shows similar types of adverse events seen in both groups, and Table 3 shows the similar grading. No patient was positive for HBV or HCV.

Table 2. Major adverse events seen in both groups.

 Adverse event Control Group (n = 21) NAC Group (n = 18)
Gastrointestinal disorders    
Gastric fullness 0 1 (5.5) . . .
Dysphagia 0 2 (11.1) . . .
Nausea 1 (4.7) 3 (16.6) 0.345
Vomiting 2 (9.5) 4 (22.2) 0.414
Hepatotoxicity 7 (33.3) 10 (55.5) 0.562
Respiratory disorders
Dyspnea 0 1 (5.5) . . .
Other disorders
Pyrosis 0 1 (5.5) . . .
Pruritus 0 1 (5.55) . . .
Rash 1 (4.7) 0 . . .

NS: Non-Significant

Table 3. Grading of adverse events seen in both groups.

     Control Group NAC Group
    (n = 21) (n = 18)
Adverse event Number of events Number of participants (%) Number of events Number of participants (%) p-value
No events   . . . 6 (28.6) . . . 2 (11.1) 0.427
Any event, except death 33 13 (61.9) 41 14 (77.8) 0.322
Grade 1   15 10 (47.6) 18 12 (55.6) 0.201
Grade 2   10 7 (33.3) 12 7 (38.9) 0.750
Grade 3   4 3 (14.3) 10 5 (27.8) 0.682
Grade 4   4 2 (9.5) 1 1 (5.6) 1
Death   4 (19.1) 5 (27.8) 0.706

NS: Non-Significant

Fig 2 shows the major outcomes related to the efficacy of the NAC arm. No differences were seen. Fig 3 details the quantification of ALT over the weeks, reinforcing that no change was seen between the groups.

Fig 2. Major outcomes and respective 95% confidence intervals.

Fig 2

P-values refer to RR estimates.

Fig 3. ALT levels between control and NAC groups over the weeks of the follow-up.

Fig 3

Discussion

This trial conducted with TB/HIV coinfected hospitalized patients aimed to estimate whether the use of NAC together with RIPE was not unsafe.

Hospitalized patients, used here as a proxy of clinical severity, were the targeted population because of their increased likelihood of evolving to death, and therefore, more prone to adhere to adjunctive therapy. Non-severe HIV/TB patients are already in use of many drugs simultaneously, and any adjunctive therapy would compromise adherence if a major benefit is not clearly seen by the patient. Therefore, we believe that adjunctive therapy in HIV/TB coinfection must be designed to give priority to more complicated patients. That requests that safety and efficacy studies are performed in this population since the very beginning of the evidence generation process.

For non-severe TB patients, NAC has been pursued as an adjunctive drug to decrease hepatotoxicity, a problem that still persists in ~25% of patients, impacting adherence to RIPE and TB cure, ultimately [19]. The only clinical trial in which NAC was concurrently used in pulmonary TB, NAC was significantly associated to faster sputum negativity, improved radiological response, weight, serum glutathione peroxidase level, and amelioration of the deregulated immune response [20].

In PLWH, up to 30% of the patients experience hepatotoxicity, HIV infection apparently being one predisposing factor [21]. However, not only hepatotoxicity is an expected effect of NAC adjunctive therapy in this population, but also culture conversion, used routinely as a marker of TB clinical recovery. This is critical in patients with immune deficiency, and increased risk of death. To date, however, no proof of concept study has been performed targeting this high-risk population of PLWH and TB coinfection. The selected dose of NAC was chosen based on the lack of immunological effect in PLWH using 600 mg qd [22], and the promising dose of 600 mg bid in TB patients [20].

Safety was the major outcome of interest in our study, considering that TB/HIV hospitalized patients are a special group of subjects under enormous stress, with very low CD4+ lymphocyte counts, and in use of many drugs with potential interactions. During the eight weeks in which NAC was used in one of the arms, adverse events were seen in similar proportions in both arms, gastrointestinal events being the most frequent (Table 2). When the total number of events and grading were assessed, no significant findings were seen, evidencing that NAC adjunctive to RIPE is not unsafe as compared to RIPE by itself in coinfected patients. No trends in decrease of hepatotoxicity in patients using NAC was seen, suggesting that oxidative stress only partially explains liver damage in these patients in use of RIPE.

TB resistance, even not being a major focus of this work, was found in 10% of the enrolled patients, which is pretty much the same percentage as seen in other similar settings in Brazil [23].

Major limitation of the trial was the reduced sample size, which did not allow for a more robust statistical analysis. However, the universe of eligible patients seen in such a reference unit is not much bigger, and the whole study recruited patients over 16 months. A multicentric approach will certainly be needed in further phase III studies. It is also known that more males present HIV/TB coinfection in Brazil [24], but in this randomized trial, Table 1 shows that more males were enrolled in the Control Group, what may be explained by chance and the small sample size. No clear bias was considered. Noteworthy to say that results found here may not be extrapolated to non-severe patients seen in the outpatient clinics. Likewise, results are not applicable to multidrug-resistant Mtb [25], a condition in which adjunctive therapies are also needed. Some patients were already hospitalized in the ICU during enrollment, and therefore, ICU hospitalization as an endpoint had limitation in the analyses. Data from our group show high early mortality rate amongst TB/HIV coinfected ICU patients. The factors predictive of mortality in this population were invasive mechanical ventilation, hypoalbuminemia, and severe immunosuppression [26]. Indigenous population was also excluded from the analysis, but represents a major burden of the disease in the Brazilian Amazon [27,28].

As the use of NAC in the HIV/TB population seems promising in terms of safety, our results indicate that RIPE plus NAC regimen is suitable for a larger phase III trial. It is worth mentioning that NAC has a well-known safety profile safety, even in much higher doses [29], is tolerable in pregnant women, is quite economically affordable, and requests no major medical supervision during the administration of oral presentations, mostly flavored. During oral administration, deacetylation reaction of NAC happens while passing along the small intestine as well as liver, thus its bioavailability is only 4–10% decreased [30]. The ongoing TB-SEQUEL cohort study (ClinicalTrials.gov Identifier: NCT03702738) aims to evaluate similar endpoints, using a higher dose of 1,200 mg bid of NAC in patients with TB, with and without HIV coinfection. Therefore, in the near future, more evidence will be generated to support the use of this safe drug in coinfected patients, still a major contributor to mortality in developing countries.

Supporting information

S1 Checklist. CONSORT 2010 checklist of information to include when reporting a randomised trial*.

(DOC)

S1 Dataset

(XLSX)

S1 File

(PDF)

Acknowledgments

The authors would like to thank all patients and the Fundação de Medicina Tropical Dr Heitor Vieira Dourado Tuberculosis Laboratory staff. This manuscript is dedicated to Maísa Safe Lacerda, a ‘secondary endpoint’ of this trial.

Data Availability

All relevant data are within the manuscript and its Supporting Information files.

Funding Statement

This work was supported by Cooperação Interfederativa do Amazonas (Interfam), funded by the Brazilian Ministry of Health. MVGL, WMM and BBA are CNPq fellows.

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Decision Letter 0

Delia Goletti

2 Jan 2020

PONE-D-19-21939

Safety and efficacy of N-acetylcysteine in hospitalized patients with HIV-associated tuberculosis: an open-label, randomized, phase II trial (RIPENACTB Study)

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We look forward to receiving your revised manuscript.

Kind regards,

Delia Goletti, M.D., Ph.D.

Academic Editor

PLOS ONE

Journal Requirements:

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2. We noticed you have some minor occurrence of overlapping text with the following previous publication(s), which needs to be addressed:

https://www.thelancet.com/journals/lanhiv/article/PIIS2352-3018(19)30154-7/fulltext

https://academic.oup.com/cid/advance-article-abstract/doi/10.1093/cid/ciz152/5365529?redirectedFrom=fulltext

The text that needs to be addressed is in the Introduction section.

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Additional Editor Comments (if provided):

the manuscript is interesting. It opens new insights in the treatment of HIV-TB patients.

Please, answer the referees' major points regarding:

1. safety issues

2. lenght of recruitment of the patients

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: No

Reviewer #2: Partly

Reviewer #3: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: No

Reviewer #2: No

Reviewer #3: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: No

Reviewer #3: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: No

Reviewer #3: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: 1. My main criticism of this manuscript is that you have not shown that the treatment condition is safe, only that it is not unsafe. You are arguing that not rejecting the null hypothesis implies the groups are similar, i.e., absence of evidence is evidence of absence. By this logic, I could test two people in each group and conclude the treatment group is "safe". This is a huge oversight and, as a statistician, very disappointing to see this. To conclude these groups are "similar", you would need to perform equivalence testing or noninferiority testing (provided you are able to set a margin for noninferiority).

2. Given the low sample sizes of the groups, I would recommend not using asymptotic tests, such as Pearson's Chi-squared. I would switch to either permutation tests or Fisher's Exact Test. Also, if you use one of those, you can tests for differences between groups with small numbers of events…provided that hypothesis fits with your goals.

3. The same is true for the logistic regression as I would recommend exact logistic regression. I also don't entirely understand the purpose of the regression models as all that I see mentioned in the text is the p-value. There seems to be no interest in the odds ratios, except in the figures.

4. Also, while the small sample size is a limitation, that is made all the much worse by using binary outcomes. Certainly, some are binary by nature, but some like hepatotoxicity could have the quantitative values analyzed. Research suggests the loss of power after dichotomizing is large (e.g., https://doi.org/10.1002/pst.331). There may be industry standards about how to cut an outcome. Fair, but this seems like a really good opportunity to analyze the quantitative values.

Reviewer #2: 1. Reference, for instance, reference 1, can be more updated.

2. Your underlying data regarding your manuscript cannot be found from the given URL.

3. Is it necessary to conduct the study in hospitalized patients? As we can have more participants without this criterion. It also quite a surprise to see not many participants in the study given 1.5 years of study duration even Brazil is one of the countries with the highest burden of TB and TB with HIV.

4. The study design was a phase II clinical trial to see the safety of the intervention. One should rather select less severe participants. However, in this study, one of the inclusion criteria was being hospitalized patient which was relatively severe.

5. The section "Results" was far too short. It needs more detail e.g., detail of liver function profiles at weeks 1, 2, 4, 6 and 8.

6. The culture conversion rate can also be calculated using hazard ratio as you mentioned in the definition that "The rate of culture conversion was defined as the time elapsed from day 1 to the first negative culture".

7. In this RCT, you can interpret your findings using relative risk or hazard ratio

8. For Table 1, mean with SD or median with IQR should be provided together with each continuous variable rather than just the stratified values. For viral load, you might consider presenting your information with the logarithm of viral load.

9. You stated to use logistic regression analysis, however, its results did not appear in the results.

10. Your conclusion was over claim for the benefit of NAC given the sample size of less than 40.

11. Given your Figure 1, it is quite interesting to see such a high rate of drug resistance tuberculosis; 5 out of 50 in both arms.

Reviewer #3: Some sentences needs revision to be fully understandable. you do not need to use long and confusing sentences in discussion. Break them to small and clear sentences.

This is a useful study in this field, similar to our study, that is not published yet.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

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Reviewer #1: No

Reviewer #2: No

Reviewer #3: Yes: Nasser Vahdati-Mashhadian

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2020 Jun 26;15(6):e0235381. doi: 10.1371/journal.pone.0235381.r002

Author response to Decision Letter 0


10 Mar 2020

Rebuttal Letter

Dear editor,

We very much appreciate the comments made by the reviewers. Despite the low number of patients in this study, we still believe that it paves the way for further studies on the subject.

Comments are made in the following lines, accordingly.

Additional Editor Comments:

The manuscript is interesting. It opens new insights in the treatment of HIV-TB patients.

Please, answer the referees' major points regarding:

1. safety issues

2. lenght of recruitment of the patients

These issues are addressed through the responses to the reviewers (see next).

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #1:

1. My main criticism of this manuscript is that you have not shown that the treatment condition is safe, only that it is not unsafe. You are arguing that not rejecting the null hypothesis implies the groups are similar, i.e., absence of evidence is evidence of absence. By this logic, I could test two people in each group and conclude the treatment group is "safe". This is a huge oversight and, as a statistician, very disappointing to see this. To conclude these groups are "similar", you would need to perform equivalence testing or noninferiority testing (provided you are able to set a margin for noninferiority).

Considering that we did not plan the study to be a non-inferiority trial, these margins were not used in principle. We fully agree that ‘safety’ has to be used with care, therefore, we have changed the whole discussion section to address the concern of the reviewer. We agree that NAC group ‘seemed’ only to be not unsafe in our limited sample. Therefore, the limitations of a more robust sample size are compensated somehow by a more cautious discussion and interpretation of our data.

2. Given the low sample sizes of the groups, I would recommend not using asymptotic tests, such as Pearson's Chi-squared. I would switch to either permutation tests or Fisher's Exact Test. Also, if you use one of those, you can test for differences between groups with small numbers of events…provided that hypothesis fits with your goals.

We fully agree with the suggestion, and Fisher’s exact test and new p-values were used, accordingly.

3. The same is true for the logistic regression as I would recommend exact logistic regression. I also don't entirely understand the purpose of the regression models as all that I see mentioned in the text is the p-value. There seems to be no interest in the odds ratios, except in the figures.

We emphasize that no regression models were used in the analyses. We have updated the RR analysis performed through generalized linear regression with log binomial.

4. Also, while the small sample size is a limitation, that is made all the much worse by using binary outcomes. Certainly, some are binary by nature, but some like hepatotoxicity could have the quantitative values analyzed. Research suggests the loss of power after dichotomizing is large (e.g., https://doi.org/10.1002/pst.331). There may be industry standards about how to cut an outcome. Fair, but this seems like a really good opportunity to analyze the quantitative values.

Not only industry, but clinical relevance, according to DAIDS (Division of Aids - NIH). Also, it allows comparisons with most of the published similar trials. Sometimes significant increase in quantitative values have absolutely no clinical relevance but may flag unreasonable concerns. However, we fully agree that hepatotoxicity is a key safety concern and therefore, we have analyzed it quantitatively and presented in the Results section.

Reviewer #2:

1. Reference, for instance, reference 1, can be more updated.

Indeed, due to the delay in the responses by PLoS One, a new 2019 version of the TB global report is available and it was updated accordingly, as well as the respective cited data.

2. Your underlying data regarding your manuscript cannot be found from the given URL.

URL is facing recent issues. Therefore, we have decided to submit the databank as supplementary material.

3. Is it necessary to conduct the study in hospitalized patients? As we can have more participants without this criterion. It also quite a surprise to see not many participants in the study given 1.5 years of study duration even Brazil is one of the countries with the highest burden of TB and TB with HIV.

Actually, as explained in the MS, our major goal was to test the safety of NAC amongst patients who would benefit most from this additional adjunctive drug, i.e., complicated hospitalized patients with TB-HIV. That is the target population we believe will benefit most from adding a new drug in the very busy drug regimen these patients already face routinely.

Ideally this could have been a multicentric study, however, more expensive. Brazil and the Brazilian Amazon actually present large TB cases numbers, but not necessarily in HIV patients. In Brazil, only 0.5% of general population is positive for HIV. Hospitalized patients are only a small sub-sample of those.

4. The study design was a phase II clinical trial to see the safety of the intervention. One should rather select less severe participants. However, in this study, one of the inclusion criteria was being hospitalized patient which was relatively severe.

As stated before, we have addressed this phase II clinical trial to the targeted population we expect to benefit most from the novelty in the future. There might be different views regarding this target product profile (TPP), but with all the respect, we do not envision all patients with TB-HIV using NAC for 8 weeks, considering that compliance is already very low in many endemic areas.

5. The section "Results" was far too short. It needs more detail e.g., detail of liver function profiles at weeks 1, 2, 4, 6 and 8.

A new graph addressing ALT levels per week amongst groups was added.

6. The culture conversion rate can also be calculated using hazard ratio as you mentioned in the definition that "The rate of culture conversion was defined as the time elapsed from day 1 to the first negative culture".

We agree with the reviewer, and the figure was updated accordingly. Data do not refer to week 8 negative culture, but negative culture until week 8, which is different.

7. In this RCT, you can interpret your findings using relative risk or hazard ratio.

The reviewer is correct, relative risk (RR) is a better analysis in a prospective study, such as a clinical trial. Figure 1 was updated accordingly.

8. For Table 1, mean with SD or median with IQR should be provided together with each continuous variable rather than just the stratified values. For viral load, you might consider presenting your information with the logarithm of viral load.

That would highly increase the size of the MS, not necessarily with useful information. However we have presented viral load data as geometric means, instead of arithmetic means, considering the point raised by the reviewer.

9. You stated to use logistic regression analysis, however, its results did not appear in the results.

We have changed now data for relative risk, therefore, regression analysis was not used anymore.

10. Your conclusion was over claim for the benefit of NAC given the sample size of less than 40.

We were more cautious in that statement and changes were made accordingly.

11. Given your Figure 1, it is quite interesting to see such a high rate of drug resistance tuberculosis; 5 out of 50 in both arms.

In hospitalized TB/HIV patients in Brazil, recent similar data point to 14% of resistance in this population (Microbiol Insights. 2018 Nov 27;11: Human Immunodeficiency Virus and Tuberculosis Coinfection in a Tertiary Hospital in Southern Brazil: Clinical Profile and Outcomes. Teixeira et al). The reference was added to the Discussion section and the valuable point made.

Reviewer #3:

Some sentences needs revision to be fully understandable. you do not need to use long and confusing sentences in discussion. Break them to small and clear sentences.

Changes were made accordingly.

This is a useful study in this field, similar to our study, that is not published yet.

That is great to hear. Thanks for sharing.

Attachment

Submitted filename: Rebuttal Letter PLoS ONE.docx

Decision Letter 1

Delia Goletti

14 May 2020

PONE-D-19-21939R1

Safety and efficacy of N-acetylcysteine in hospitalized patients with HIV-associated tuberculosis: an open-label, randomized, phase II trial (RIPENACTB Study)

PLOS ONE

Dear dr LACERDA, deep apologies for the delay.

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

==============================

ACADEMIC EDITOR:

the manuscript has been revised by additional two statisticians.

Few comments are needed:

1- Clarify that the adverse event RATES were similar in the two arms.

2- Statistical Analysis Section:

A. Differences in categorical variables were TESTED using Fisher’s exact test.

B. This statement is unclear, “generalized linear regression with log binomial.” More fully explain the statistical methods associated with the general linear regression model.

C. Remove “Differences with” in the sentence “Differences with p-values < 0.05 were  considered statistically significant.

3- Replace NS with numeric p-values.

4- Figure 2: Indicate the type of test used to generate the p-value.

5- State and justify the study’s target sample size with a pre-study statistical power calculation. thank you for being patient.

==============================

We would appreciate receiving your revised manuscript by Jun 28 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter.

To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). This letter should be uploaded as separate file and labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. This file should be uploaded as separate file and labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. This file should be uploaded as separate file and labeled 'Manuscript'.

Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.

We look forward to receiving your revised manuscript.

Kind regards,

Delia Goletti, M.D., Ph.D.

Academic Editor

PLOS ONE

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #3: (No Response)

Reviewer #4: (No Response)

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #3: Yes

Reviewer #4: Partly

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #3: Yes

Reviewer #4: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #3: Yes

Reviewer #4: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #3: Yes

Reviewer #4: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #3: (No Response)

Reviewer #4: A phase II randomized two-arm controlled clinical trial was conducted to assess the safety and tolerability of N-acetylcysteine (NAC) in HIV patients with tuberculosis. The adverse event rates were similar in the two arms, and no evidence was found to refute that NAC was unsafe.

Minor revisions:

1- Clarify that the adverse event RATES were similar in the two arms.

2- Statistical Analysis Section:

A. Differences in categorical variables were TESTED using Fisher’s exact test.

B. This statement is unclear, “generalized linear regression with log binomial.” More fully explain the statistical methods associated with the general linear regression model.

C. Remove “Differences with” in the sentence “Differences with p-values < 0.05 were considered statistically significant.

3- Replace NS with numeric p-values.

4- Figure 2: Indicate the type of test used to generate the p-value.

5- State and justify the study’s target sample size with a pre-study statistical power calculation.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #3: No

Reviewer #4: No

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2020 Jun 26;15(6):e0235381. doi: 10.1371/journal.pone.0235381.r004

Author response to Decision Letter 1


10 Jun 2020

Dear Editor,

We appreciate the opportunity to clarify the points raised by the reviewer and believe that the manuscript has improved significantly.

Reviewer #4: A phase II randomized two-arm controlled clinical trial was conducted to assess the safety and tolerability of N-acetylcysteine (NAC) in HIV patients with tuberculosis. The adverse event rates were similar in the two arms, and no evidence was found to refute that NAC was unsafe.

Minor revisions:

1- Clarify that the adverse event RATES were similar in the two arms.

Response: The sentence was adjusted accordingly in the abstract.

2- Statistical Analysis Section:

A. Differences in categorical variables were TESTED using Fisher’s exact test.

Response: The sentence was adjusted accordingly.

B. This statement is unclear, “generalized linear regression with log binomial.” More fully explain the statistical methods associated with the general linear regression model.

Response: The sentence was rephrased to clarify this point.

“Univariate log-binomial generalized linear regression with respective 95% confidence intervals (CI) was used to estimate relative risks (RR) in order to assess associations with the major outcomes of the study”.

C. Remove “Differences with” in the sentence “Differences with p-values < 0.05 were considered statistically significant.

Response: The sentence was adjusted accordingly.

3- Replace NS with numeric p-values.

Response: Replaced accordingly.

4- Figure 2: Indicate the type of test used to generate the p-value.

Response: The following sentence was added to the graph legend: “P-values refer to RR estimates” to clarify.

5- State and justify the study’s target sample size with a pre-study statistical power calculation.

Response: A paragraph including sample size calculation was added to the manuscript Study participants section as follows: “For the sample size calculation, a percentage of 37.5% of hepatotoxicity among the RIPE group and no episodes for RIPENAC was considered [12]. A 1:1 ratio with a power of 80% and a significance level of 95% was used. A total sample size of 36 was estimated.

Attachment

Submitted filename: Rebuttal letter Safe et al 21_05_2020f.docx

Decision Letter 2

Delia Goletti

16 Jun 2020

Safety and efficacy of N-acetylcysteine in hospitalized patients with HIV-associated tuberculosis: an open-label, randomized, phase II trial (RIPENACTB Study)

PONE-D-19-21939R2

Dear Dr. Marcus VG Lacerda, 

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Delia Goletti, M.D., Ph.D.

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

The authors answered the questions raised.

Reviewers' comments:

Acceptance letter

Delia Goletti

18 Jun 2020

PONE-D-19-21939R2

Safety and efficacy of N-acetylcysteine in hospitalized patients with HIV-associated tuberculosis: an open-label, randomized, phase II trial (RIPENACTB Study)

Dear Dr. Lacerda:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Delia Goletti

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Checklist. CONSORT 2010 checklist of information to include when reporting a randomised trial*.

    (DOC)

    S1 Dataset

    (XLSX)

    S1 File

    (PDF)

    Attachment

    Submitted filename: Rebuttal Letter PLoS ONE.docx

    Attachment

    Submitted filename: Rebuttal letter Safe et al 21_05_2020f.docx

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting Information files.


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