The title compound is constructed about a tri-substituted 1,2,3-triazole ring, with the substituent at the C atom flanked by the C and N atoms being a substituted amide group, and with the adjacent C and N atoms bearing phenyl and benzyl groups, respectively. In the crystal, pairwise amide-N—H⋯O(carbonyl) hydrogen bonds give rise to a centrosymmetric dimer.
Keywords: crystal structure; 1,2,3-triazole; Hirshfeld surface analysis; computational chemistry
Abstract
The title compound, C20H20N4O3, is constructed about a tri-substituted 1,2,3-triazole ring, with the substituent at one C atom flanked by the C and N atoms being a substituted amide group, and with the adjacent C and N atoms bearing phenyl and benzyl groups, respectively; the dihedral angle between the pendant phenyl rings is 81.17 (12)°, indicative of an almost orthogonal disposition. In the crystal, pairwise amide-N—H⋯O(carbonyl) hydrogen bonds lead to a centrosymmetric dimer incorporating methylene-C—H⋯π(benzene) interactions. The dimers are linked into a supramolecular layer in the ab plane via methylene-C—H⋯N(azo) and benzene-C—H⋯O(amide) interactions; the layers stack along the c-axis direction without directional interactions between them. The above-mentioned intermolecular contacts are apparent in the analysis of the calculated Hirshfeld surface, which also provides evidence for short inter-layer H⋯C contacts with a significant dispersion energy contribution.
Chemical context
The title 1,2,3-triazole-5-carboxamide derivative, (I), was recently prepared and characterized from a palladium-catalysed aminocarbonylation reaction with the use of dimethyl carbonate as a sustainable solvent (de Albuquerque et al., 2019 ▸). The motivation for preparing such molecules rests with the known pharmacological activity of these and related 1,2,3-triazole derivatives (Bonandi et al., 2017 ▸). Unambiguous structure determination of (I) is reported herein, via X-ray crystallography, as is a detailed analysis of the supramolecular association by Hirshfeld surface analysis and computational chemistry.
Structural commentary
The molecular structure of (I), Fig. 1 ▸, features a tri-substituted 1,2,3-triazole ring. The five-membered ring is strictly planar with the r.m.s. deviation of the fitted atoms being 0.0021 Å. Within the ring, the lengthening of the formal azo-N2—N3 [1.306 (4) Å] and C1—C2 [1.388 (4) Å] double bonds coupled with the shortening of the N1—N2 [1.341 (4) Å], C1—N3 [1.368 (4) Å] and C2—N1 [1.347 (4) Å] bonds from their standard double/single bond values, are indicative of significant delocalization of π-electron density over the ring atoms. While the N1-bound C3-atom lies 0.131 (6) Å out of the plane of the ring, the C1- and C2-bound C10 [0.012 (6) Å] and C16 [0.008 (6) Å] atoms are effectively co-planar with the ring. The terminal residues are twisted out of the plane of the central ring as seen in the (C1,C2,N1–N3)/(C4–C9) [74.46 (13)°], (C1,C2,N1–N3)/(C10–C15) [28.10 (17)°] and (C1,C2,N1–N3)/(C16,N4,O1) [47.1 (2)°] dihedral angles. The dihedral angle between the terminal phenyl rings is 81.17 (12)° indicating a close to orthogonal disposition. There is a twist in the amide residue as seen in the value of the N4—C17—C18—C19 torsion angle of 73.6 (4)°, indicating a (+)syn-clinal relationship. This results in a dihedral angle close to orthogonal for the amide (C16,N4,O1) and carboxylate (C19,O2,O3) residues, i.e. 73.6 (4)°.
Figure 1.
The molecular structure of (I), showing the atom-labelling scheme and displacement ellipsoids at the 35% probability level.
Supramolecular features
The molecular packing in (I) features several identifiable points of contact, Table 1 ▸. The most evident of these are amide-N4—H⋯O2(carbonyl) hydrogen bonds occurring between centrosymmetrically related molecules to give the dimer shown in Fig. 2 ▸(a). The molecules in the dimer are linked via a 12-membered {⋯OC3NH}2 synthon and additional stability to the assembly is provided by methylene-C17—H⋯π(benzene) interactions. The dimeric aggregates are connected into a supramolecular layer propagating in the ab plane via methylene-C3—H⋯N2(azo) and benzene-C15—H⋯O1(amide) interactions, Fig. 2 ▸(b). The layers stack in an …ABAB… pattern along the c axis and inter-digitate to potentially form π–π interactions. However, these are not apparent, Fig. 2 ▸(c). A more detailed analysis of the interactions occurring in the inter-layer region is provided by an analysis of the calculated Hirshfeld surfaces.
Table 1. Hydrogen-bond geometry (Å, °).
Cg1 is the centroid of the (C10–C15) ring.
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N4—H4N⋯O2i | 0.86 (3) | 2.04 (3) | 2.884 (4) | 167 (3) |
| C3—H3B⋯N2ii | 0.97 | 2.55 | 3.495 (5) | 165 |
| C15—H15⋯O1iii | 0.93 | 2.51 | 3.335 (5) | 148 |
| C17—H17B⋯Cg1i | 0.97 | 2.71 | 3.640 (4) | 161 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Figure 2.
Molecular packing in (I): (a) supramolecular dimer sustained by amide-N4—H⋯O2(carbonyl) hydrogen bonds (H atoms omitted for clarity), (b) layer where the dimers of (a) are connected by methylene-C3—H⋯N(azo) and benzene-C15—H⋯O1(amide) interactions [the methylene-C17—H⋯π(benzene) interactions occur within the dimers] and (c) a view of the unit-cell contents shown in projection down the a axis. The N—H⋯O, C—H⋯O and C—H⋯π interactions are shown as blue, orange and purple dashed lines, respectively.
Hirshfeld surface analysis
In order to probe the interaction between molecules of (I) in the crystal, Hirshfeld surfaces mapped with the normalized contact distance d norm (McKinnon et al., 2004 ▸), electrostatic potential (Spackman et al., 2008 ▸) and two-dimensional fingerprint plots were calculated using Crystal Explorer 17 (Turner et al., 2017 ▸) by established procedures (Tan et al., 2019 ▸). The electrostatic potentials were calculated using the wavefunction at the HF/STO-3 G level of theory. The bright-red spots on the Hirshfeld surface mapped over d norm in Fig. 3 ▸(a), i.e. near the amide-H4N and carbonyl-O2 atoms, correspond to the amide-N—H4N⋯O2(carbonyl) hydrogen bond (Table 1 ▸). This hydrogen bond is also reflected in Hirshfeld surface mapped over the electrostatic potential Fig. 3 ▸(b), where the blue (positive electrostatic potential) and red (negative electrostatic potential) regions are apparent around the amide-H4N and carbonyl-O2 atoms, respectively.
Figure 3.
Views of the Hirshfeld surface for (I) mapped over (a) d norm in the range −0.249 to +1.397 arbitrary units and (b) the electrostatic potential map in the range −0.097 to 0.134 atomic units, highlighting N—H⋯O hydrogen bonding.
The methylene-C3—H⋯N2(azo) and benzene-C15—H15⋯O1(amide) interactions are observed as faint-red spots on the d norm-mapped Hirshfeld surface in Fig. 4 ▸(a), with a distance of ∼0.3 Å shorter than the sum of their van der Waals radii, Table 2 ▸. The other faint red spots near the benzyl (C5, C12, C15, H7 and H12) and methylene (H17A) atoms in Fig. 4 ▸(b) correspond to the inter-layer H7⋯C5, H17A⋯C12 and H12⋯C15 short contacts listed in Table 2 ▸. Even though the C—H⋯π interaction, Table 1 ▸, was not manifested on the d norm-mapped Hirshfeld surface, this interaction shows up as a distinctive orange ‘pothole’ on the shape-index-mapped Hirshfeld surface, Fig. 5 ▸.
Figure 4.
Views of the Hirshfeld surface mapped over d norm for (I) in the range −0.249 to +1.397 arbitrary units, highlighting (a) weak C—H⋯N and C—H⋯O interactions and (b) short H⋯C contacts, highlighted within red circles.
Table 2. Summary of short interatomic contacts (Å) in (I)a .
| Contact | Distance | Symmetry operation |
|---|---|---|
| H4N⋯O2b | 1.90 | −x + 1, −y, −z + 1 |
| H3B⋯N2b | 2.44 | −x + 1, −y + 1, −z + 1 |
| H15⋯O1b | 2.38 | −x, −y + 1, −z + 1 |
| H7⋯C5 | 2.63 | −x, y − , −z +
|
| H17A⋯C12 | 2.72 |
x, −y + , z −
|
| H12⋯C15 | 2.73 | −x + 1, y − , −z +
|
Figure 5.
A view of the Hirshfeld surface for (I) mapped with the shape-index property, highlighting the intermolecular C—H⋯π interaction.
The overall two-dimensional fingerprint plot for the Hirshfeld surface of (I) is shown with characteristic pseudo-symmetric wings in the upper left and lower right sides of the d e and d i diagonal axes, respectively, in Fig. 6 ▸(a). The delineated H⋯H, H⋯C/C⋯H, H⋯O/O⋯H and H⋯N/N⋯H contacts from the overall two-dimensional fingerprint plot are illustrated in Fig. 6 ▸(b)–(e), respectively. The percentage contributions from different interatomic contacts to the Hirshfeld surface of (I) are summarized in Table 3 ▸. The greatest contribution to the overall Hirshfeld surface are due to H⋯H contacts, which contribute 46.7%. However, the H⋯H contacts appear as a square-like distribution with a small beak at d e = d i ∼2.6 Å in Fig. 6 ▸(b), corresponding to H8⋯H11 ≃2.67 Å (symmetry operation: −x, −y, −z + 1) indicating that all H⋯H contacts have long-range characteristics. The H⋯C/C⋯H contacts on the Hirshfeld surface, which contribute 24.9% to the overall surface, Fig. 6 ▸(c), reflect the C—H⋯π interaction and C⋯H short contacts as discussed above. Consistent with the C—H⋯O and C—H⋯N interactions occurring in the crystal, H⋯O/O⋯H and H⋯N/N⋯H contacts contribute 14.4 and 12.6%, respectively, to the overall Hirshfeld surface. These appear as two sharp symmetric spikes in the fingerprint plots at d e + d i ≃ 1.9 and 2.4 Å in Fig. 6 ▸(d) and (e), respectively. The contribution from the other interatomic contacts summarized in Table 2 ▸ has a negligible influence on the calculated Hirshfeld surface of (I).
Figure 6.
(a) The full two-dimensional fingerprint plot for (II) and (b)–(e) those delineated into H⋯H, H⋯C/C⋯H, H⋯O/O⋯H and H⋯N/N⋯H contacts, respectively.
Table 3. Percentage contributions of interatomic contacts to the Hirshfeld surface for (I).
| Contact | Percentage contribution |
|---|---|
| H⋯H | 46.7 |
| H⋯C/C⋯H | 24.9 |
| H⋯O/O⋯H | 14.4 |
| H⋯N/N⋯H | 12.6 |
| O⋯C/C⋯O | 1.0 |
| O⋯O | 0.4 |
Energy frameworks
The pairwise interaction energies between the molecules in the crystal of (I) were calculated using the 6-31G(d,p) basis set at the B3LYP level of theory. The total energy comprises four terms, i.e. the electrostatic (E ele), polarization (E pol), dispersion (E dis) and exchange-repulsion (E rep) energy terms and were calculated with Crystal Explorer 17 (Turner et al., 2017 ▸). The benchmarked energies were scaled according to Mackenzie et al. (2017 ▸) while E ele, E pol, E dis, and E rep were scaled as 1.057, 0.740, 0.871 and 0.618, respectively (Edwards et al., 2017 ▸). The energies for the identified intermolecular interactions are tabulated in Table 4 ▸. As anticipated, the greatest stabilization energy, with approximately equal contributions from E ele and E dis, arises from the conventional amide-N—H4N⋯O2(carbonyl) hydrogen bond. The next most significant energies of stabilization arise from the methylene-C3—H⋯N2(azo) (dominated by E dis) and benzene-C15—H15⋯O1(amide) (approximately equal contributions from E ele and E dis) interactions. In terms of energy, the next most significant contributions comes from an interaction in the inter-layer region, namely the H17A⋯C12 contact, Table 4 ▸. As for the other identified inter-layer contacts, E dis is the dominant contributor. Views of the energy framework diagrams down a axis are shown in Fig. 7 ▸ and confirm the crystal to be mainly stabilized by electrostatic and dispersive forces with a clear dominance from the latter. The total E ele of all pairwise interactions sum to −142.9 kJ mol−1, while the total E dis computes to −251.1 kJ mol−1.
Table 4. Summary of interaction energies (kJ mol−1) calculated for (I).
| Contact | R (Å) | E ele | E pol | E dis | E rep | E tot |
|---|---|---|---|---|---|---|
| Intra-later | ||||||
| N4—H4N⋯O2i | 5.21 | −73.7 | −14.9 | −84.6 | 94.6 | −104.2 |
| C15—H15⋯O1iii | 5.57 | −21.8 | −5.7 | −56.7 | 34.0 | −55.0 |
| C3—H3B⋯N2ii | 9.97 | −21.4 | −6.2 | −20.5 | 25.1 | −29.6 |
| H20B⋯N3iv + | ||||||
| H9⋯O3v + | ||||||
| H8⋯H18A v | 11.43 | −5.1 | −1.6 | −14.8 | 6.9 | −15.2 |
| H8⋯H14vi | 12.81 | −1.4 | −0.5 | −9.8 | 2.2 | −9.0 |
| H8⋯H11vii | 9.77 | −1.2 | −0.4 | −8.6 | 1.6 | −8.0 |
| H20C⋯H20C viii | 14.84 | 1.3 | −0.2 | −3.1 | 0.6 | −1.1 |
| Inter-layer | ||||||
| H17A⋯C12ix | 9.37 | −11.3 | −3.4 | −22.7 | 14.8 | −25.1 |
| H12⋯C15x | 10.15 | −5.1 | −1.2 | −16.3 | 10.0 | −14.3 |
| H7⋯C5xi | 12.03 | −3.2 | −0.4 | −14.0 | 11.5 | −8.7 |
Notes: Symmetry operations: (i) −x + 1, −y, −z + 1; (ii) −x + 1, −y + 1, −z + 1; (iii) −x, −y + 1, −z + 1; (iv) x + 1, y, z; (v) x − 1, y, z; (vi) x − 1, −y +
, z −
; (vii) −x, −y, −z + 1; (viii) −x + 2, −y, −z + 1; (ix) x, −y +
, −z −
; (x) −x + 1, y −
, −z +
; (xi) −x, y −
, −z +
.
Figure 7.
Perspective views of the energy frameworks calculated for (I) showing (a) electrostatic potential force, (b) dispersion force and (c) total energy, each plotted down the a axis. The radii of the cylinders are proportional to the relative magnitudes of the corresponding energies and were adjusted to the same scale factor of 50 with a cut-off value of 5 kJ mol−1 within 1 × 1 × 1 unit cells.
Database survey
There is a sole literature precedent for (I), namely the analogue with ethyl carboxylate and N-phenylamide substituents at the C1- and C2-atoms, respectively (WAGROM; Katritzky et al., 2003 ▸), hereafter (II). An overlay diagram of (I) and (II) is given in Fig. 8 ▸. As anticipated, the five-membered rings and the α-atoms of the three substituents exhibit close concordance but, beyond this, the molecular conformations of the terminal residues differ significantly.
Figure 8.
Overlay diagram for (I), red image, and (II), blue image. The molecules have been overlapped so the five-membered rings are superimposed.
Synthesis and crystallization
Compound (I) was prepared as described in the literature (de Albuquerque et al., 2019 ▸). The crystals were obtained by the slow evaporation from an ethanol solution of (I).
Refinement details
Crystal data, data collection and structure refinement details are summarized in Table 5 ▸. The carbon-bound H atoms were placed in calculated positions (C—H = 0.93–0.97 Å) and were included in the refinement in the riding-model approximation, with U iso(H) set to 1.2–1.5U eq(C). The nitrogen-bound H atom was located in a difference Fourier map and refined with N—H = 0.86±0.01 Å, and with U iso(H) set to 1.2U eq(N).
Table 5. Experimental details.
| Crystal data | |
| Chemical formula | C20H20N4O3 |
| M r | 364.40 |
| Crystal system, space group | Monoclinic, P21/c |
| Temperature (K) | 293 |
| a, b, c (Å) | 11.4312 (14), 9.3013 (10), 18.737 (3) |
| β (°) | 104.695 (4) |
| V (Å3) | 1927.1 (4) |
| Z | 4 |
| Radiation type | Mo Kα |
| μ (mm−1) | 0.09 |
| Crystal size (mm) | 0.46 × 0.31 × 0.24 |
| Data collection | |
| Diffractometer | Bruker APEXII CCD |
| Absorption correction | Multi-scan (SADABS; Bruker 2009 ▸) |
| T min, T max | 0.544, 0.745 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 24191, 3975, 2965 |
| R int | 0.066 |
| (sin θ/λ)max (Å−1) | 0.628 |
| Refinement | |
| R[F 2 > 2σ(F 2)], wR(F 2), S | 0.077, 0.204, 1.08 |
| No. of reflections | 3975 |
| No. of parameters | 249 |
| No. of restraints | 1 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.23, −0.20 |
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989020007380/hb7921sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989020007380/hb7921Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989020007380/hb7921Isup3.cml
CCDC reference: 2007664
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
Regina H. A. Santos from IQSC-USP is thanked for the X-ray data collection. Ricardo S. Schwab from DQ-UFSCar is thanked for the generous gift of the sample.
supplementary crystallographic information
Crystal data
| C20H20N4O3 | F(000) = 768 |
| Mr = 364.40 | Dx = 1.256 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| a = 11.4312 (14) Å | Cell parameters from 6479 reflections |
| b = 9.3013 (10) Å | θ = 2.5–23.9° |
| c = 18.737 (3) Å | µ = 0.09 mm−1 |
| β = 104.695 (4)° | T = 293 K |
| V = 1927.1 (4) Å3 | Irregular, colourless |
| Z = 4 | 0.46 × 0.31 × 0.24 mm |
Data collection
| Bruker APEXII CCD diffractometer | 2965 reflections with I > 2σ(I) |
| φ and ω scans | Rint = 0.066 |
| Absorption correction: multi-scan (SADABS; Bruker 2009) | θmax = 26.5°, θmin = 1.8° |
| Tmin = 0.544, Tmax = 0.745 | h = −14→14 |
| 24191 measured reflections | k = −11→11 |
| 3975 independent reflections | l = −23→23 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.077 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.204 | w = 1/[σ2(Fo2) + (0.0396P)2 + 3.4742P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.08 | (Δ/σ)max < 0.001 |
| 3975 reflections | Δρmax = 0.23 e Å−3 |
| 249 parameters | Δρmin = −0.20 e Å−3 |
| 1 restraint | Extinction correction: SHELXL-2018/3 (Sheldrick 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0267 (19) |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.3969 (2) | 0.4513 (3) | 0.43041 (14) | 0.0558 (7) | |
| O2 | 0.6787 (3) | 0.0379 (3) | 0.5049 (2) | 0.0836 (10) | |
| O3 | 0.8198 (3) | 0.2035 (3) | 0.5160 (2) | 0.0829 (10) | |
| N1 | 0.1976 (2) | 0.4009 (3) | 0.49963 (14) | 0.0450 (7) | |
| N2 | 0.1426 (3) | 0.3888 (4) | 0.55460 (17) | 0.0635 (9) | |
| N3 | 0.2173 (3) | 0.3227 (4) | 0.60901 (16) | 0.0598 (9) | |
| N4 | 0.4356 (2) | 0.2164 (3) | 0.45617 (14) | 0.0409 (6) | |
| H4N | 0.409 (3) | 0.143 (2) | 0.4749 (18) | 0.049* | |
| C1 | 0.3218 (3) | 0.2907 (3) | 0.58938 (16) | 0.0399 (7) | |
| C2 | 0.3086 (3) | 0.3412 (3) | 0.51805 (16) | 0.0370 (7) | |
| C3 | 0.1285 (3) | 0.4596 (4) | 0.42786 (19) | 0.0527 (9) | |
| H3A | 0.180906 | 0.520492 | 0.407502 | 0.063* | |
| H3B | 0.062468 | 0.518335 | 0.435328 | 0.063* | |
| C4 | 0.0785 (3) | 0.3410 (4) | 0.37406 (18) | 0.0482 (8) | |
| C5 | 0.1396 (4) | 0.2962 (5) | 0.3228 (2) | 0.0691 (12) | |
| H5 | 0.212880 | 0.338684 | 0.321872 | 0.083* | |
| C6 | 0.0922 (6) | 0.1895 (7) | 0.2736 (2) | 0.0986 (19) | |
| H6 | 0.133334 | 0.158992 | 0.239445 | 0.118* | |
| C7 | −0.0168 (7) | 0.1276 (7) | 0.2749 (3) | 0.111 (2) | |
| H7 | −0.049067 | 0.054764 | 0.241663 | 0.133* | |
| C8 | −0.0772 (6) | 0.1728 (6) | 0.3245 (3) | 0.1071 (19) | |
| H8 | −0.151197 | 0.131428 | 0.324646 | 0.128* | |
| C9 | −0.0299 (4) | 0.2792 (5) | 0.3747 (2) | 0.0707 (12) | |
| H9 | −0.071464 | 0.308948 | 0.408779 | 0.085* | |
| C10 | 0.4213 (3) | 0.2167 (3) | 0.64097 (16) | 0.0410 (7) | |
| C11 | 0.3958 (4) | 0.1262 (4) | 0.69416 (19) | 0.0598 (10) | |
| H11 | 0.316046 | 0.112350 | 0.695971 | 0.072* | |
| C12 | 0.4876 (6) | 0.0571 (5) | 0.7442 (2) | 0.0812 (15) | |
| H12 | 0.469542 | −0.003111 | 0.779513 | 0.097* | |
| C13 | 0.6056 (5) | 0.0765 (5) | 0.7421 (2) | 0.0787 (15) | |
| H13 | 0.667277 | 0.028938 | 0.775749 | 0.094* | |
| C14 | 0.6325 (4) | 0.1658 (5) | 0.6906 (2) | 0.0679 (12) | |
| H14 | 0.712690 | 0.179290 | 0.689602 | 0.081* | |
| C15 | 0.5411 (3) | 0.2367 (4) | 0.63968 (18) | 0.0489 (8) | |
| H15 | 0.560139 | 0.297321 | 0.604805 | 0.059* | |
| C16 | 0.3854 (3) | 0.3416 (3) | 0.46468 (16) | 0.0357 (7) | |
| C17 | 0.5073 (3) | 0.1985 (4) | 0.40222 (19) | 0.0560 (10) | |
| H17A | 0.469697 | 0.251931 | 0.357879 | 0.067* | |
| H17B | 0.508059 | 0.097734 | 0.389017 | 0.067* | |
| C18 | 0.6360 (3) | 0.2500 (4) | 0.4315 (2) | 0.0601 (10) | |
| H18A | 0.673282 | 0.260002 | 0.390743 | 0.072* | |
| H18B | 0.634970 | 0.344092 | 0.453692 | 0.072* | |
| C19 | 0.7104 (3) | 0.1507 (4) | 0.4873 (2) | 0.0525 (9) | |
| C20 | 0.9011 (5) | 0.1147 (7) | 0.5700 (4) | 0.116 (2) | |
| H20A | 0.864583 | 0.092823 | 0.609558 | 0.173* | |
| H20B | 0.975609 | 0.165410 | 0.589204 | 0.173* | |
| H20C | 0.917047 | 0.027061 | 0.547137 | 0.173* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0565 (15) | 0.0461 (14) | 0.0659 (16) | −0.0003 (11) | 0.0177 (12) | 0.0213 (12) |
| O2 | 0.079 (2) | 0.0530 (17) | 0.114 (3) | −0.0147 (15) | 0.0151 (18) | 0.0224 (17) |
| O3 | 0.0569 (17) | 0.071 (2) | 0.116 (3) | −0.0102 (15) | 0.0128 (17) | 0.0251 (18) |
| N1 | 0.0430 (15) | 0.0491 (16) | 0.0420 (14) | 0.0096 (13) | 0.0092 (12) | −0.0051 (12) |
| N2 | 0.0502 (18) | 0.092 (3) | 0.0525 (18) | 0.0146 (18) | 0.0204 (15) | −0.0114 (18) |
| N3 | 0.0558 (18) | 0.082 (2) | 0.0465 (17) | 0.0083 (17) | 0.0218 (14) | −0.0051 (16) |
| N4 | 0.0478 (15) | 0.0374 (14) | 0.0422 (14) | −0.0016 (12) | 0.0203 (12) | 0.0002 (12) |
| C1 | 0.0442 (17) | 0.0411 (17) | 0.0365 (15) | 0.0006 (14) | 0.0140 (13) | −0.0057 (13) |
| C2 | 0.0396 (16) | 0.0311 (15) | 0.0399 (16) | 0.0042 (13) | 0.0094 (12) | −0.0019 (13) |
| C3 | 0.050 (2) | 0.048 (2) | 0.055 (2) | 0.0155 (16) | 0.0042 (16) | 0.0014 (16) |
| C4 | 0.0507 (19) | 0.0495 (19) | 0.0407 (17) | 0.0144 (16) | 0.0048 (14) | 0.0016 (15) |
| C5 | 0.076 (3) | 0.084 (3) | 0.049 (2) | 0.021 (2) | 0.018 (2) | 0.001 (2) |
| C6 | 0.128 (5) | 0.113 (5) | 0.048 (2) | 0.037 (4) | 0.009 (3) | −0.024 (3) |
| C7 | 0.133 (5) | 0.096 (4) | 0.079 (4) | 0.006 (4) | −0.019 (4) | −0.041 (3) |
| C8 | 0.108 (4) | 0.094 (4) | 0.104 (4) | −0.032 (3) | −0.001 (4) | −0.024 (4) |
| C9 | 0.062 (3) | 0.082 (3) | 0.064 (2) | −0.007 (2) | 0.009 (2) | −0.014 (2) |
| C10 | 0.059 (2) | 0.0350 (16) | 0.0297 (14) | 0.0017 (14) | 0.0129 (13) | −0.0044 (12) |
| C11 | 0.093 (3) | 0.052 (2) | 0.0417 (19) | 0.000 (2) | 0.0307 (19) | 0.0006 (16) |
| C12 | 0.148 (5) | 0.060 (3) | 0.042 (2) | 0.021 (3) | 0.035 (3) | 0.0155 (19) |
| C13 | 0.119 (4) | 0.070 (3) | 0.038 (2) | 0.037 (3) | 0.002 (2) | 0.0025 (19) |
| C14 | 0.064 (2) | 0.078 (3) | 0.052 (2) | 0.019 (2) | −0.0025 (18) | −0.005 (2) |
| C15 | 0.057 (2) | 0.048 (2) | 0.0388 (17) | 0.0015 (16) | 0.0058 (15) | 0.0003 (15) |
| C16 | 0.0341 (15) | 0.0349 (16) | 0.0360 (15) | −0.0021 (13) | 0.0053 (12) | 0.0029 (13) |
| C17 | 0.059 (2) | 0.069 (2) | 0.0475 (19) | 0.0052 (19) | 0.0267 (17) | −0.0019 (17) |
| C18 | 0.058 (2) | 0.059 (2) | 0.072 (2) | 0.0023 (19) | 0.034 (2) | 0.015 (2) |
| C19 | 0.055 (2) | 0.044 (2) | 0.066 (2) | −0.0056 (17) | 0.0293 (18) | 0.0014 (17) |
| C20 | 0.068 (3) | 0.119 (5) | 0.145 (5) | 0.011 (3) | 0.000 (3) | 0.036 (4) |
Geometric parameters (Å, º)
| O1—C16 | 1.231 (4) | C7—H7 | 0.9300 |
| O2—C19 | 1.184 (4) | C8—C9 | 1.378 (7) |
| O3—C19 | 1.324 (5) | C8—H8 | 0.9300 |
| O3—C20 | 1.446 (6) | C9—H9 | 0.9300 |
| N1—N2 | 1.341 (4) | C10—C15 | 1.388 (5) |
| N1—C2 | 1.347 (4) | C10—C11 | 1.391 (5) |
| N1—C3 | 1.480 (4) | C11—C12 | 1.376 (6) |
| N2—N3 | 1.306 (4) | C11—H11 | 0.9300 |
| N3—C1 | 1.368 (4) | C12—C13 | 1.371 (7) |
| N4—C16 | 1.326 (4) | C12—H12 | 0.9300 |
| N4—C17 | 1.464 (4) | C13—C14 | 1.366 (6) |
| N4—H4N | 0.860 (10) | C13—H13 | 0.9300 |
| C1—C2 | 1.388 (4) | C14—C15 | 1.389 (5) |
| C1—C10 | 1.464 (4) | C14—H14 | 0.9300 |
| C2—C16 | 1.489 (4) | C15—H15 | 0.9300 |
| C3—C4 | 1.506 (5) | C17—C18 | 1.511 (5) |
| C3—H3A | 0.9700 | C17—H17A | 0.9700 |
| C3—H3B | 0.9700 | C17—H17B | 0.9700 |
| C4—C9 | 1.368 (5) | C18—C19 | 1.489 (5) |
| C4—C5 | 1.387 (5) | C18—H18A | 0.9700 |
| C5—C6 | 1.370 (7) | C18—H18B | 0.9700 |
| C5—H5 | 0.9300 | C20—H20A | 0.9600 |
| C6—C7 | 1.378 (8) | C20—H20B | 0.9600 |
| C6—H6 | 0.9300 | C20—H20C | 0.9600 |
| C7—C8 | 1.358 (8) | ||
| C19—O3—C20 | 116.5 (4) | C11—C10—C1 | 119.2 (3) |
| N2—N1—C2 | 111.3 (3) | C12—C11—C10 | 120.5 (4) |
| N2—N1—C3 | 118.9 (3) | C12—C11—H11 | 119.7 |
| C2—N1—C3 | 129.5 (3) | C10—C11—H11 | 119.7 |
| N3—N2—N1 | 107.3 (3) | C13—C12—C11 | 120.3 (4) |
| N2—N3—C1 | 109.6 (3) | C13—C12—H12 | 119.8 |
| C16—N4—C17 | 121.3 (3) | C11—C12—H12 | 119.8 |
| C16—N4—H4N | 116 (2) | C14—C13—C12 | 120.0 (4) |
| C17—N4—H4N | 121 (2) | C14—C13—H13 | 120.0 |
| N3—C1—C2 | 107.2 (3) | C12—C13—H13 | 120.0 |
| N3—C1—C10 | 120.6 (3) | C13—C14—C15 | 120.6 (4) |
| C2—C1—C10 | 132.1 (3) | C13—C14—H14 | 119.7 |
| N1—C2—C1 | 104.6 (3) | C15—C14—H14 | 119.7 |
| N1—C2—C16 | 120.3 (3) | C10—C15—C14 | 119.9 (4) |
| C1—C2—C16 | 135.2 (3) | C10—C15—H15 | 120.1 |
| N1—C3—C4 | 111.3 (3) | C14—C15—H15 | 120.1 |
| N1—C3—H3A | 109.4 | O1—C16—N4 | 123.9 (3) |
| C4—C3—H3A | 109.4 | O1—C16—C2 | 120.8 (3) |
| N1—C3—H3B | 109.4 | N4—C16—C2 | 115.2 (3) |
| C4—C3—H3B | 109.4 | N4—C17—C18 | 112.1 (3) |
| H3A—C3—H3B | 108.0 | N4—C17—H17A | 109.2 |
| C9—C4—C5 | 119.7 (4) | C18—C17—H17A | 109.2 |
| C9—C4—C3 | 119.5 (3) | N4—C17—H17B | 109.2 |
| C5—C4—C3 | 120.7 (4) | C18—C17—H17B | 109.2 |
| C6—C5—C4 | 120.0 (5) | H17A—C17—H17B | 107.9 |
| C6—C5—H5 | 120.0 | C19—C18—C17 | 112.9 (3) |
| C4—C5—H5 | 120.0 | C19—C18—H18A | 109.0 |
| C5—C6—C7 | 119.8 (5) | C17—C18—H18A | 109.0 |
| C5—C6—H6 | 120.1 | C19—C18—H18B | 109.0 |
| C7—C6—H6 | 120.1 | C17—C18—H18B | 109.0 |
| C8—C7—C6 | 120.0 (5) | H18A—C18—H18B | 107.8 |
| C8—C7—H7 | 120.0 | O2—C19—O3 | 122.7 (4) |
| C6—C7—H7 | 120.0 | O2—C19—C18 | 125.7 (4) |
| C7—C8—C9 | 120.7 (6) | O3—C19—C18 | 111.6 (3) |
| C7—C8—H8 | 119.7 | O3—C20—H20A | 109.5 |
| C9—C8—H8 | 119.7 | O3—C20—H20B | 109.5 |
| C4—C9—C8 | 119.7 (5) | H20A—C20—H20B | 109.5 |
| C4—C9—H9 | 120.1 | O3—C20—H20C | 109.5 |
| C8—C9—H9 | 120.1 | H20A—C20—H20C | 109.5 |
| C15—C10—C11 | 118.7 (3) | H20B—C20—H20C | 109.5 |
| C15—C10—C1 | 122.0 (3) | ||
| C2—N1—N2—N3 | 0.5 (4) | N3—C1—C10—C15 | −150.9 (3) |
| C3—N1—N2—N3 | 174.1 (3) | C2—C1—C10—C15 | 28.8 (5) |
| N1—N2—N3—C1 | −0.3 (4) | N3—C1—C10—C11 | 27.5 (5) |
| N2—N3—C1—C2 | −0.1 (4) | C2—C1—C10—C11 | −152.8 (4) |
| N2—N3—C1—C10 | 179.6 (3) | C15—C10—C11—C12 | −0.5 (5) |
| N2—N1—C2—C1 | −0.6 (4) | C1—C10—C11—C12 | −178.9 (3) |
| C3—N1—C2—C1 | −173.3 (3) | C10—C11—C12—C13 | 0.0 (6) |
| N2—N1—C2—C16 | 179.6 (3) | C11—C12—C13—C14 | 0.5 (7) |
| C3—N1—C2—C16 | 6.8 (5) | C12—C13—C14—C15 | −0.5 (6) |
| N3—C1—C2—N1 | 0.4 (4) | C11—C10—C15—C14 | 0.5 (5) |
| C10—C1—C2—N1 | −179.3 (3) | C1—C10—C15—C14 | 178.9 (3) |
| N3—C1—C2—C16 | −179.8 (3) | C13—C14—C15—C10 | 0.0 (6) |
| C10—C1—C2—C16 | 0.6 (6) | C17—N4—C16—O1 | −2.0 (5) |
| N2—N1—C3—C4 | −97.4 (4) | C17—N4—C16—C2 | 176.2 (3) |
| C2—N1—C3—C4 | 74.8 (5) | N1—C2—C16—O1 | 46.0 (4) |
| N1—C3—C4—C9 | 85.4 (4) | C1—C2—C16—O1 | −133.9 (4) |
| N1—C3—C4—C5 | −96.2 (4) | N1—C2—C16—N4 | −132.3 (3) |
| C9—C4—C5—C6 | −0.7 (6) | C1—C2—C16—N4 | 47.9 (5) |
| C3—C4—C5—C6 | −179.1 (4) | C16—N4—C17—C18 | 82.3 (4) |
| C4—C5—C6—C7 | 0.4 (8) | N4—C17—C18—C19 | 73.6 (4) |
| C5—C6—C7—C8 | 0.3 (9) | C20—O3—C19—O2 | 0.8 (7) |
| C6—C7—C8—C9 | −0.8 (10) | C20—O3—C19—C18 | −178.9 (4) |
| C5—C4—C9—C8 | 0.2 (7) | C17—C18—C19—O2 | 5.0 (6) |
| C3—C4—C9—C8 | 178.6 (4) | C17—C18—C19—O3 | −175.4 (3) |
| C7—C8—C9—C4 | 0.6 (9) |
Hydrogen-bond geometry (Å, º)
Cg1 is the centroid of the (C10–C15) ring.
| D—H···A | D—H | H···A | D···A | D—H···A |
| N4—H4N···O2i | 0.86 (3) | 2.04 (3) | 2.884 (4) | 167 (3) |
| C3—H3B···N2ii | 0.97 | 2.55 | 3.495 (5) | 165 |
| C15—H15···O1iii | 0.93 | 2.51 | 3.335 (5) | 148 |
| C17—H17B···Cg1i | 0.97 | 2.71 | 3.640 (4) | 161 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x, −y+1, −z+1; (iii) −x+1, −y+1, −z+1.
Funding Statement
This work was funded by Coordenação de Aperfeiçoamento de Pessoal de Nível Superior grants 312210/2019–1, 433957/2018–2, 406273/2015–4, and 303207/2017–5. Sunway University grant STR-RCTR-RCCM-001–2019.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989020007380/hb7921sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989020007380/hb7921Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989020007380/hb7921Isup3.cml
CCDC reference: 2007664
Additional supporting information: crystallographic information; 3D view; checkCIF report








