Abstract
Aim:
This study attempted to identify predictors of S-warfarin clearance (CL[S]) and to make a pharmacokinetic evaluation of genotype-based dosing algorithms in African–Americans.
Methods:
Using plasma S-warfarin concentration (Cp[S]) at a steady state and eight SNPs previously shown to influence warfarin dose in African–Americans, CL(S) and its predictors were estimated by population pharmacokinetic analysis in 60 African–Americans. The time courses of Cp(S) following either the loading dose or maintenance dose were simulated using the population pharmacokinetic estimates.
Results:
CYP2C9*8 and body surface area or body weight were predictors of CL(S) (−30 and −5% per −0.1 m2/−10 kg reduction in CL[S], respectively) in African–Americans. Simulations of Cp(S) showed that Cp(S) at steady state was 1.4-times higher in patients with CYP2C9*8 than in those with CYP2C9*1/*1, irrespective of the algorithm for loading dose or maintenance dose.
Conclusion:
African–Americans possess independent predictors of CL(S), possibly leading to a prediction error of any dosing algorithm that excludes African-specific variant(s).
Keywords: African–American, CYP2C9*8, genotype, pharmacokinetics, warfarin
Considerable interindividual and interpopulation variability has been observed in the maintenance dose (MD) of warfarin [1,2]. Genetic polymorphisms of VKORC1 and CYP2C9 have been established as major determinants of this variability, especially in Caucasians [3]. Accordingly, pharmacogenetic-based algorithms, for example, the International Warfarin Pharmacogenetics Consortium (IWPC) and the warfarindosing.org [4-6] are currently available for estimating the initial dose of warfarin. However, the performance of these algorithms, based mainly on data from Caucasian patients, is lower for African–Americans [1], partly because of the lack of African-specific variants predictive of warfarin requirements [7]. A number of previous studies have searched for genetic polymorphisms that influence warfarin dose in African–Americans, and these have revealed variants, such as CYP2C9*5, *6, *8, *11, rs7089580, rs12777823, the GGCX (CAA) 16/17 repeat, and FPGS (rs7856096) [8-12]. However, less is known about the pharmacokinetics of warfarin in African–American populations than is the case for Caucasians. Therefore, the primary goal of the present study was to characterize the pharmacokinetics of S-warfarin, which is mainly responsible for the anticoagulation response, and to identify predictors of S-warfarin clearance (CL[S]) in African–American patients by employing a population pharmacokinetics (PPK) approach.
The results of two large randomized controlled trials [13,14] to assess the clinical utility of genotype-based warfarin dosing have been reported recently. However, the outcomes of these two studies were contradictory. The EU-PACT study with a cohort predominantly comprising whites (98.6%) showed that genotype information clearly improved anticoagulation control [13]. On the other hand, the COAG study with a mixed ethnicity cohort including 27% African–Americans found no improvement in anticoagulation control [14]. In the COAG trial, the performance of the genetic algorithm was worse than that of the clinical algorithm in African–Americans who were likely to have international normalized ratios (INRs) above the therapeutic range. Therefore, the secondary goal of the present study was to search for factors potentially responsible for the discrepancy between the outcomes of the two trials by performing simulation studies with PPK parameter estimates obtained in African–Americans.
Methods
Patients
Sixty African–Americans on a fixed maintenance dose of warfarin for at least 2 weeks and had an INR within 0.1 units of the target range of 2 to 3 participated in the present study [8,15]. Race was determined based on self-report and patients taking CYP2C9 inducers or inhibitors (e.g., phenytoin, carbamazepine, rifampin, amiodarone, metronidazole, sulfonamides), those with a documented history of hepatic disease, or those reporting nonadherence to warfarin within the previous 2 weeks were excluded.
Study protocol
Blood was collected 11.5 to 18.7 h after the last dose of warfarin during the maintenance phase. Separated plasma and blood samples for DNA extraction were stored at −80° until analysis. The study protocol was approved by the Institutional Review Boards of the University of Illinois at Chicago, the University of Chicago and the Meiji Pharmaceutical University. Written informed consent was obtained from each patient.
Measurements of warfarin plasma concentration & response
The plasma concentration (Cp) of warfarin enantiomers was determined by chiral high-pressure liquid chromatography, as reported previously [16]. The anticoagulant effect of warfarin was assessed by the INR value, which was obtained through point-of-care testing using the ProTime® monitor (ITC, NJ, USA).
Genotyping for CYP2C9 & VKORC1
Genomic DNA from warfarin-treated patients was isolated from whole blood using a Puregene kit (Qiagen, CA, USA). The CYP2C9*2, *3, *5, *6, *11, rs7089580, rs12777823 and VKORC1 −1639G>A alleles were determined by PCR and pyrosequencing, and the 449G>A variant (CYP2C9*8) was determined by PCR and capillary sequencing, as described previously [17-19].
Population pharmacokinetic analysis
The Dose-Cp relationship for S-warfarin, Cp(S), was analyzed using NONMEM® version 7.2.0 (Icon Development Solutions, MD, USA) [20]. The first-order conditional estimation with interaction (FOCE-INTER) method was used for analysis of the Dose-Cp(S) relationship. Model selection was guided by the decrease in the objective function value (OFV). The time course of Cp(S) was analyzed using a one-compartment model with first-order absorption and elimination rate constants (Equation 1), and the population mean, interindividual error and covariates of CL(S) were estimated:
(1) |
where Cp(S)ij represents the Cp(S) in the ith individual at the jth observation, F is the bioavailability fixed at 1.0, Ka is the absorption rate constant fixed at 2 h−1 and Vd is the volume of distribution of S-warfarin fixed at 13.8 l [21]. The interindividual variability in CL(S) was estimated using an exponential model and the residual intraindividual variability in Cp(S) was fixed at 1% using a relative error model.
The adequacy of the model predictions was assessed using visual diagnostic plots of the respective population (PRED) and individual predicted values (IPRED) of Cp(S) versus the corresponding observed values, and PRED versus the weighted residuals. The robustness of the final PPK model was assessed using a bootstrap procedure in which means and 95% CI were obtained for the parameter estimates using 1000 datasets resampled from the original dataset. The entire procedure was performed using Wings for NONMEM (Version 720 [22]) [23].
Multivariate analysis of covariates for CL(S)
The contribution of patients’ demographic and genotypic characteristics (i.e., age, body weight, body surface area (BSA), AST, ALT and CLcr as continuous variables, and sex, history of smoking, CYP2C9*2, *3, *5, *6 or *11, CYP2C9*8, rs7089580 and rs12777823 as categorical variables) to CL(S) was assessed by multivariate analyses using NONMEM. For respective continuous variables, for example, the effect of BSA on CL(S), the following two models (a power model and an exponential model) were examined:
(2) |
(3) |
Multivariate analyses to select significant covariates of CL(S) involved a forward inclusion step (p < 0.05) and a backward deletion step (p < 0.05).
Impact of covariates on CL(S)
In order to assess the impact of BSA and CYP2C9*8 on CL(S), Cp(S) values following administration of racemic warfarin at 6.5 mg/day (the median maintenance dose in this study) in 1000 African–American patients with different combinations of BSA and CYP2C9 genotypes (1.99 vs 1.89 m2 and CYP2C9*1/*1 vs *1/*8 or *8/*8) were generated by the Monte Carlo technique using the PPK parameter estimates obtained in the final model.
Simulation of Cp(S) to compare algorithms employing loading doses or maintenance doses
We performed simulations of the time courses of Cp(S) in order to compare the respective algorithms employing loading doses (LDs) and maintenance doses. In this simulation, the maintenance doses in typical African–American patients (age 54.5 years, height 163.8 cm, body weight 90.0 kg, being the median values in the present cohort) with different combinations of CYP2C9 (*1 vs *8) and VKORC1 (GG vs GA vs AA) genotypes were estimated using the IWPC pharmacogenetic algorithm [4]. The 3-day loading doses were estimated using the EU-PACT algorithm [24] (kel = 0.013 h−1 for patients with CYP2C9*1/*1 and kel = 0.009 h−1 for patients with CYP2C9*8 and τ = 24 h), in which maintenance doses estimated by the IWPC algorithm are started from day 4.
Statistics
Associations between patients’ continuous demographic data and CL(S) were examined using the Pearson correlation test. Comparisons between the median CL(S) obtained from patients with different categorical variables and those having different CYP2C9 genotypes were performed by the Mann–Whitney U test. Probability was compared using either the χ2 test or Fisher’s exact test. Data are presented as medians with the upper and lower quartile ranges (25th and 75th percentiles) or means ± SD where appropriate. A two-tailed p-value of less than 0.05 was considered as the level of statistical significance for all analyses. All statistical analyses were performed using SPSS version 17.0.
Results
Patient characteristics
Demographic, clinical and genotypic characteristics for our 60 African–American patients are shown in Table 1. The maintenance dose in these patients (6.8 mg/day) was higher than those for Caucasian and Asian patients, as reported previously [2,25]. The patient demographics (mostly female with a larger body size) are consistent with previous reports of warfarin pharmacogenetics in larger cohorts of African–Americans [12]. There was a significant (p < 0.01) correlation between BSA and body weight (r = 0.968) and female patients had a smaller BSA (1.96 vs 2.11 m2, p < 0.05). An association was found between CYP2C9*8 and rs12777823 (p < 0.05). Minor-allele frequencies for the genetic variants (CYP2C9*2, *3, *5, *6, *8, *11, rs7089580 and rs12777823) were consistent with those reported previously in African–American populations [8,11,12].
Table 1.
Patient demographic, clinical and genotypic characteristics.
Characteristics† | n = 60 |
---|---|
Age (years) | 54.5 (32.0–81.5) |
Gender (F/M) | 52/8 (86.7%) |
Body weight (kg) | 90.0 (60.2–157.4) |
Height (cm) | 163.8 (152.4–184.2) |
Body surface area (m2) | 1.99 (1.61–2.61) |
BMI | 34.2 (23.1–55.4) |
Maintenance dose (mg/day) | 6.79 (2.67–12.80) |
INR | 2.54 (1.95–3.51) |
AST (IU/L) | 22.0 (14.0–58.9) |
ALT (IU/L) | 18.5 (10.5–52.8) |
Creatinine clearance (ml/min) | 58.2 (22.6–107.1) |
Alcohol (+/−) | 2/58 (3.3%) |
Smoking (+/−) | 9/51 (15.0%) |
Indication | |
Atrial fibrillation | 5 (8.3%) |
Stroke | 9 (15.0%) |
Deep vein thrombosis | 2 (3.3%) |
Ventricular tachycardia | 29 (48.3%) |
Pulmonary embolism | 27 (45.0%) |
Peripheral vascular disease | 4 (6.7%) |
Cardiac valve replacement | 2 (3.3%) |
Complication | |
Hypertension (+/−) | 39/21 (65.0%) |
Diabetes mellitus (+/−) | 15/45 (25.0%) |
Genotype wild/hetero/homo (minor allele frequencies) | |
CYP2C9*2 rs1799853 (C>T) | 55/5/0 (0.042) |
CYP2C9*3 rs1057910 (A>C) | 59/1 /0 (0.008) |
CYP2C9*5 rs28371686 (C>G) | 59/1/0 (0.008) |
CYP2C9*6 rs9332131 (delA) | 59/1/0 (0.008) |
CYP2C9*8 rs7900194 (G>A) | 48/10/2 (0.117) |
CYP2C9*11 rs28371685 (C>T) | 58/2/0 (0.017) |
CYP2C9 rs7089580 (A>T)‡ | 42/14/0 (0.125) |
rs12777823 (G>A) | 30/24/6 (0.300) |
VKORC1 rs9923231 (−1639G>A) | 50/10/0 (0.083) |
Data are median values (95% CI) or number (%).
rs7089580 was determined in 56 of 60 patients.
Relationships between dose & Cp(S)
The estimated pharmacokinetic parameters in African–Americans are summarized in Table 2. Overlapping means and 95% CIs for population parameters obtained from the original dataset and those from the bootstrap values were observed. A high predictive performance with no systematic deviations of the final PPK model was demonstrated in the diagnostic plots (Figure 1A-C). These results suggested that the parameter estimates obtained can adequately describe the time courses of Cp(S) in African–American populations.
Table 2.
Population pharmacokinetic parameter estimates for the plasma S-warfarin concentration.
Original dataset |
Bootstrap value |
|||
---|---|---|---|---|
Mean | 95% CI | Mean† | 95% CI‡ | |
PK estimates: Cp(S) | ||||
CL(S) (ml/h)§ | 179 | 158.8–199.2 | 179 | 159.0–203.0 |
Effect of BSA on CL(S) | 0.518 | 0.187–0.849 | 0.516 | 0.178–0.859 |
Effect of CYP2C9*8 on CL(S) | 0.691 | 0.552–0.830 | 0.698 | 0.563–0.862 |
Interindividual error | ||||
ωCL(S) (%) | 37.5 | 32.7–42.4 | 36.5 | 30.2–42.9 |
Residual error | ||||
σ (%) | 1 | 1 |
Mean of 1000 bootstrap analyses for pharmacokinetics estimates.
The 2.5th and 97.5th values of the ranked bootstrap parameter estimates.
CL(S) (ml/h) = 179 × 0.691CYP2C9*8 × EXP{0.518 × (BSAindividual−1.99)}, where CYP2C9*8 = 0 in patients with CYP2C9*1/*1 and CYP2C9*8 = 1 in patients with CYP2C9*1/*8 or *8/*8. BSAmedian is 1.99 m2.
BSA: Body surface area; CL(S): S-warfarin clearance; Cp(S): S-warfarin concentration; PK: Pharmacokinetic.
Figure 1. Diagnostic plots to assess the adequacy of the estimated population parameters.
Relationship between population predictions of plasma Cp(S) and the observed values (A), between individual predictions of Cp(S) and the observed values (B) and that between population predictions of Cp(S) and weighted residuals (C).
Cp(S): S-warfarin concentration.
Predictors of CL(S) & their impact
The median values (95% CI) of CL(S) for patients were 204 ml/h (92–382 ml/h, n = 39) for CYP2C9*1/*1, 161 ml/h (122–251 ml/h, n = 5) for CYP2C9*1/*2, 67 ml/h (n = 1) for CYP2C9*1/*3, 221 ml/h (n = 1) for CYP2C9*1/*5, 106 ml/h (n = 1) for CYP2C9*1/*6, 125 ml/h (71–228 ml/h, n = 12) for CYP2C9*1/*8 and *8/*8, 114 and 258 ml/h (n = 2) for CYP2C9*1/*11, 197 ml/h (101–365 ml/h, n = 14) for heterozygous rs7089580 and 147 ml/h (65–303 ml/h, n = 30) for hetero- and homo-zygous rs12777823, respectively. During the screening step, BSA, body weight, CYP2C9*8 and rs12777823 were extracted as significant covariates of CL(S) (p < 0.05). Age and CYP2C9 SNPs (*2, *3, *5, *6 or *11) exerted no significant effect on CL(S) in this population. As a strong internal correlation was observed between BSA and body weight, a final model based on either BSA or body weight was developed, respectively. During the deletion step, rs12777823 was removed from both models. In the final model constructed on the basis of BSA, CL(S) was expressed by the following equation:
(4) |
where CYP2C9*8 = 0 in patients with CYP2C9*1/*1 and CYP2C9*8 = 1 in patients with CYP2C9*1/*8 or *8/*8 and 1.99 m2 was the median BSA. As shown in Equation 4, BSA with the exponential model (Equation 3 in Methods) and the CYP2C9*8 genotype were significant independent contributors to overall variability in CL(S), in other words, a 30% reduction in CL(S) for patients with CYP2C9*8 relative to patients with the wild-type and a 5% reduction in CL(S) per −0.1 m2 in BSA from 1.99 m2 to 1.89 m2, which was roughly equivalent to a −10 kg reduction in body weight from 93 kg to 83 kg (height = 164 cm) (Table 2 & Figure 2). As shown in Figure 2, CYP2C9*8 mutation had a stronger impact than BSA/body weight (0.1 m2/10 kg) on CL(S).
Figure 2. Impacts of predictors of clearance for S-warfarin extracted from population pharmacokinetics analysis.
Influences of CYP2C9*8 mutation and BSA on S-warfarin clearance (CL[S]) in the time courses of plasma Cp(S) (A) and the Cp(S)ss,ave (B) were predicted following administration of racemic warfarin at 6.5 mg/day in typical 1000 African–American individuals with different combinations of BSA (1.99 vs 1.89 m2)/BW (93.2 vs 83.2 kg) and CYP2C9*8 genotypes (*1/*1 vs *1/*8 or *8/*8). These datasets were generated by the Monte Carlo technique. Cp(S)ss,ave (B) are shown as box and whisker plots. The horizontal line indicates the median and the box covers the 25–75th percentiles. Solid circles are outliers.
*p < 0.05 between the two groups, **p < 0.01 between the two groups.
BSA: Body surface area; BW: Body weight; Cp(S): S-warfarin concentration; Cp(S)ss,ave: Average S-warfarin concentration at a steady state; NS: Not significant.
Simulations of Cp(S) using algorithms with loading doses or maintenance doses
Predicted time courses of Cp(S) following administration of maintenance doses estimated using the IWPC algorithm [4] are shown in Figure 3A and those after the three loading doses estimated using the EU-PACT algorithm [24] are shown in Figure 3B. The maintenance doses estimated for typical African–American patients carrying the CYP2C9*1/*1 and the respective VKORCI GG, GA or AA allele were 6.0, 4.5 and 3.5 mg/day, respectively. The predicted maintenance doses estimated using the IWPC algorithm were approximately 1.0 mg/day lower than those observed in patients with the CYP2C9*1/*1 and the respective VKORC1 GG or GA allele. As the IWPC algorithm does not include the CYP2C9*8 variant as a covariate for dose prediction, patients with the CYP2C9*8 allele would receive the same doses as patients with CYP2C9*1/*1, which might lead to a 1.4-times higher average Cp(S) at the steady state (Cpss) in patients with any of the three VKORC1 genotypes. In addition, simulations showed that the determinant of the average Cpss values might be the VKORC1 genotype (e.g., patients with the insensitive GG genotype would require a higher dose, and thus a higher Cpss, than patients carrying the sensitive AA genotype in order to maintain the therapeutic INR) as well as the CYP2C9 genotype, while the time to reach 95% of the steady state value is determined by CL(S), i.e., the CYP2C9 genotypes in this simulation (i.e., 10 days for patients with CYP2C9*1/*1 and 14.5 days for patients with CYP2C9*8, irrespective of the VKORC1 genotype) (Figure 3A). In the case of the loading dose algorithm (EU-PACT) being employed, the time to reach 95% of the steady state would be reduced (i.e., 2 days for patients with CYP2C9*1/*1 and 10 days for patients with CYP2C9*8), whereas the same average Cpss observed after the maintenance dose would be attained (Figure 3B). When a 30% lower dose was used for patients with CYP2C9*8 in the loading dose algorithm, the differences in the time to reach 95% of the steady state and the average Cpss between patients with the CYP2C9 wild-type and those with CYP2C9*8 would be eliminated (Figure 3C).
Figure 3. Influences of the different induction algorithms for warfarin (maintenance doses or loading doses) on the time courses of plasma concentration for S-warfarin.
The time courses of Cp(S) following administration of either maintenance doses estimated using the International Warfarin Pharmacogenetics Consortium algorithm ([A] The maintenance dose algorithm), loading doses estimated using the EU-PACT algorithm ([B] The LD algorithm*1; the LD estimated for patients with CYP2C9*1/*1 was used for patients with CYP2C9*8) or ([C] The LD algorithm*1,*8; a 30% lower LD estimated for patients with CYP2C9*1/*1 was used for patients with CYP2C9*8) were predicted in typical African–American individuals (age 54.5 years, height 163.8 cm and body weight 90 kg) with different combinations of CYP2C9 (solid line:*1/*1 vs dashed line: *1/*8 or *8/*8) and VKORC1 (left: GG; middle: GA; right: AA) genotypes.
Cp(S): S-warfarin concentration; IWPC: International Warfarin Pharmacogenetics Consortium; LD: Loading dose; MD: Maintenance dose.
Discussion
Although many genetic variants affecting warfarin dose have been found in African–Americans [8-12], the present study employing multivariate analysis is the first to demonstrate that CYP2C9*8 and BSA (or body weight) are the stronger contributors to CL(S) in this population. The CYP2C9*2/*3 genotypes and age, which are major determinants of CL(S) in Caucasian and Asian patients [26,27], did not have significant effects on CL(S) in the study population. The low frequency of these variants in the African–American population may be responsible for the results we obtained. In addition, the population mean values for CL(S) estimated using PPK analysis in African–Americans with CYP2C9*1/*1 (179 ml/h) appear to be lower than those reported in Caucasian and Asian patients (348 ml/h [26] and 240 ml/h [27], respectively). These data strongly suggest a population difference in the relationships between dose and Cp(S) (the pharmacokinetic [PK] process) [28].
To clarify the reasons for the inconsistent outcomes of the two randomized controlled trials [13,14] which investigated the clinical utility of genotype-based warfarin dosing, we focused on differences in the study designs and populations. While the EU-PACT study involving mostly whites employed a loading dose, the COAG study in which 27% of the population was African Americas used a maintenance dose. Therefore, we compared the time courses of Cp(S) following a loading dose (Figure 3B) with those for a maintenance dose (Figure 3A) in African–Americans. Our simulations showed that the time to reach a steady state was reduced for all genotype combinations of CYP2C9 and VKORC1 after starting the loading dose, which may have contributed to maintenance of the therapeutic INR control from the early phase during warfarin induction observed in the EU-PACT study [13]. In addition, patients carrying CYP2C9*8 would have a higher average Cp(S) at the steady state than patients with the wild-type, which might have partly contributed to the INRs above the therapeutic range observed for African–Americans in the COAG study [14]. Similarly, a higher Cp(S) would be observed in patients carrying CYP2C9*5, *6, *11 and rs12777823, who have been reported to show lower CL(S) than patients with the CYP2C9 wild-type. Moreover, if the VKORC1 genotype is the only factor contributing to lower warfarin sensitivity in African–Americans [1], then the Cp(S) needed in order to maintain the therapeutic INR would be similar in patients with the same VKORC1 genotype, irrespective of any difference in ethnicity. However, the average Cpss for achieving the therapeutic INR in African–Americans appears to be higher than those simulated in white and Asian patients with three different combinations of CYP2C9*1/*1 and respective VKORC1 GG, GA and AA genotypes [26,27], which might have contributed to the supratherapeutic INR values observed for African–American patients in the COAG study [14].
The present study had several limitations. First, the influences of African–American-specific, but rather rare SNPs, such as CYP2C9*5, *6, *11 and rs7089580, on CL(S) could not be estimated due to the limited number of the study patients. Although the minor-allele frequency of 30% was observed for rs12777823, this SNP was excluded as a predictor of CL(S), partly because of the significant association with CYP2C9*8. In addition to the small sample size, the majority of our patients were rather young, obese and female, and therefore they may not have been the best representatives of African–American patients receiving warfarin. With regard to the sampling point, we were unable to estimate intraindividual variability in the PPK analysis because only one sampling point at the steady state was available for patients in our clinical study. Most importantly, the present study was limited to pharmacokinetics. Pharmacodynamic studies will be necessary to clarify factors contributing to not only interindividual but also interpopulation differences in warfarin doses, and to construct population-specific dosing algorithms that will predict the warfarin requirements for all patients of any ethnic background.
Conclusion & future perspective
PK–pharmacodynamic (PD) studies of drugs in African–Americans have been very limited, and this is also the case for warfarin. As a result, the currently available genotype-based warfarin dosing algorithms do not include African-specific variants that may influence the PK–PD of warfarin, and therefore the performance of these dosing algorithms appears to be lower in African-Americans. This study showed that African–Americans had PK predictors being independent from those of Caucasians that were mainly related to demographic and genetic factors, and that the different PK profiles could be eliminated by taking African-specific pharmacokinetic characteristics into account. Future clinical investigations identifying PK and PD determinants in minority populations will clearly be necessary. Such studies will help to improve dose prediction and anticoagulation control for patients as a whole, irrespective of their racial origin.
Supplementary Material
Executive summary.
Predictors of S-warfarin clearance
CYP2C9*8, but not CYP2C9*2/*3, and body surface area (BSA)/body weight were determinants of S-warfarin clearance (CL[S]) in African–Americans.
The influence of CYP2C9*8 (−30%) was larger than that of BSA/body weight (−5% per every 0.1 m2 decrease in BSA or every 10 kg decrease in body weight) in reducing CL(S).
Simulations of plasma S-warfarin concentration to assess genotype-based warfarin dosing algorithms
The time to reach a steady state following the loading dose will be reduced compared with the maintenance dose for all genotype combinations of CYP2C9 and VKORC1.
If currently available algorithms are used for patients with CYP2C9*8, the plasma S-warfarin concentration (Cp[S]) at steady state will be 1.4-times higher than those in patients with CYP2C9*1/*1.
Acknowledgements
The authors would like to thank A Onozuka, Y Asakura and M Tachikawa for their excellent technical assistance.
Financial & competing interests disclosure
This work was supported in part by grants from the Ministry of Education, Culture, Sports, Science and Technology of Japan (KAKENHI C, 20590548) and an American Heart Association Midwest Affiliate Spring 2010 Grant-in Aid (10GRNT3750024). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. The authors have no other relevant affiliations or financial involvement with any organization or entity with a financial interest in or financial conflict with the subject matter or materials discussed in the manuscript apart from those disclosed.
No writing assistance was utilized in the production of this manuscript.
Footnotes
Ethical conduct of research
The authors state that they have obtained appropriate institutional review board approval or have followed the principles outlined in the Declaration of Helsinki for all human or animal experimental investigations. In addition, for investigations involving human subjects, informed consent has been obtained from the participants involved.
References
Papers of special note have been highlighted as:
• of interest
- 1.Limdi NA, Wadelius M, Cavallari L et al. Warfarin pharmacogenetics: a single VKORC1 polymorphism is predictive of dose across 3 racial groups. Blood 115(18), 3827–3834 (2010).• A single VKORC1 polymorphism (−1639 G>A) was the determinant of warfarin requirements across different racial groups.
- 2.Takahashi H, Wilkinson GR, Nutescu EA et al. Different contributions of polymorphisms in VKORC1 and CYP2C9 to intra- and inter-population differences in maintenance dose of warfarin in Japanese, Caucasians and African-Americans. Pharmacogenet. Genomics 16(2), 101–110 (2006). [DOI] [PubMed] [Google Scholar]
- 3.Rieder MJ, Reiner AP, Gage BF et al. Effect of VKORC1 haplotypes on transcriptional regulation and warfarin dose. N. Engl. J. Med 352(22), 2285–2293 (2005). [DOI] [PubMed] [Google Scholar]
- 4.The International Warfarin Pharmacogenetics Consortium. Estimation of the warfarin dose with clinical and pharmacogenetic data. N. Engl. J. Med 360(8), 753–764 (2009).• A genetic based warfarin dosing algorithm created based on the largest multiethnic data was superior to the clinical algorithm in estimating the dose.
- 5.Gage BF, Eby C, Johnson JA et al. Use of pharmacogenetic and clinical factors to predict the therapeutic dose of warfarin. Clin. Pharmacol. Ther 84(3), 326–331 (2008). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6.Warfarin Dosing. www.warfarindosing.org
- 7.Perera MA, Cavallari LH, Johnson JA. Warfarin pharmacogenetics: an illustration of the importance of studies in minority populations. Clin. Pharmacol. Ther 95(3), 242–244 (2014). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8.Liu Y, Jeong H, Takahashi H et al. Decreased warfarin clearance associated with the CYP2C9 R150H (*8) polymorphism. Clin. Pharmacol. Ther 91(4), 660–665 (2012). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9.Daneshjou R, Gamazon ER, Burkley B et al. Genetic variant in folate homeostasis associated with lower warfarin dose in African Americans. Blood 124(14), 2298–2305 (2014). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10.Cavallari LH, Perera M, Wadelius M et al. Association of the GGCX (CAA) 16/17 repeat polymorphism with higher warfarin dose requirements in African Americans. Pharmacogenet. Genomics 22(2), 152–158 (2012). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Perera MA, Gamazon E, Cavallari LH et al. The missing association: sequencing-based discovery of novel SNPs in VKORC1 and CYP2C9 that affect warfarin dose in African Americans. Clin. Pharmacol. Ther 89(3), 408–415 (2011). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Perera MA, Cavallari LH, Limdi NA et al. Genetic variants associated with warfarin dose in African-American individuals: a genome-wide association study. Lancet 382(9894), 790–796 (2013).• A genome-wide association study revealed an African-specific effect of a CYP2C variant (rs12777823) on warfarin requirement.
- 13.Pirmohamed M, Burnside G, Eriksson N et al. A randomized trial of genotype-guided dosing of warfarin. N. Engl. J. Med 369(24), 2294–2303 (2013). [DOI] [PubMed] [Google Scholar]
- 14.Kimmel SE, French B, Kasner SE et al. A pharmacogenetic versus a clinical algorithm for warfarin dosing. N. Engl. J. Med 369(24), 2283–2293 (2013). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 15.Cavallari LH, Vaynshteyn D, Freeman KM et al. CYP2C9 promoter region single-nucleotide polymorphisms linked to the R150H polymorphism are functional suggesting their role in CYP2C9*8-mediated effects. Pharmacogenet. Genomics 23(4), 228–231 (2013). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Takahashi H, Kashima T, Kimura S et al. Determination of unbound warfarin enantiomers in human plasma and 7-hydroxywarfarin in human urine by chiral stationary-phase liquid chromatography with ultraviolet or fluorescence and on-line circular dichroism detection.J. Chromatogr. B Biomed. Sci. Appl 701(1), 71–80 (1997). [DOI] [PubMed] [Google Scholar]
- 17.Hruska MW, Frye RF, Langaee TY. Pyrosequencing method for genotyping cytochrome P450 CYP2C8 and CYP2C9 enzymes. Clin. Chem 50(12), 2392–2395 (2004). [DOI] [PubMed] [Google Scholar]
- 18.Cavallari LH, Butler C, Langaee TY et al. Association of apolipoprotein E genotype with duration of time to achieve a stable warfarin dose in African-American patients. Pharmacotherapy 31(8), 785–792 (2011). [DOI] [PubMed] [Google Scholar]
- 19.Aquilante CL, Langaee TY, Lopez LM et al. Influence of coagulation factor, vitamin K epoxide reductase complex subunit 1, and cytochrome P450 2C9 gene polymorphisms on warfarin dose requirements. Clin. Pharmacol. Ther 79(4), 291–302 (2006). [DOI] [PubMed] [Google Scholar]
- 20.Beal SL, Sheiner LB. NONMEM User’s Guides. NONMEM Project Group, University of California, San Francisco, CA, USA: (1994). [Google Scholar]
- 21.Hamberg AK, Dahl ML, Barban M et al. A PK–PD model for predicting the impact of age, CYP2C9, and VKORC1 genotype on individualization of warfarin therapy. Clin. Pharmacol. Ther 81(4), 529–538 (2007). [DOI] [PubMed] [Google Scholar]
- 22.Wings for NONMEM. http://wfn.sourceforge.net
- 23.Parke J, Holford NH, Charles BG. A procedure for generating bootstrap samples for the validation of nonlinear mixed-effects population models. Comput. Methods Programs Biomed 59(1), 19–29 (1999). [DOI] [PubMed] [Google Scholar]
- 24.Avery PJ, Jorgensen A, Hamberg AK et al. A proposal for an individualized pharmacogenetics-based warfarin initiation dose regimen for patients commencing anticoagulation therapy. Clin. Pharmacol. Ther 90(5), 706 (2011).• A pharmacogenetic loading dose algorithm of warfarin using the CYP2C9 genotype-based half-life may avoid overshooting of international normalized ratio without affecting the time to reach the target range.
- 25.Scordo MG, Pengo V, Spina E, Dahl ML, Gusella M, Padrini R. Influence of CYP2C9 and CYP2C19 genetic polymorphisms on warfarin maintenance dose and metabolic clearance. Clin. Pharmacol. Ther 72(6), 702–710 (2002). [DOI] [PubMed] [Google Scholar]
- 26.Hamberg AK, Wadelius M, Lindh JD et al. A pharmacometric model describing the relationship between warfarin dose and INR response with respect to variations in CYP2C9, VKORC1, and age. Clin. Pharmacol. Ther 87(6), 727–734 (2010). [DOI] [PubMed] [Google Scholar]
- 27.Ohara M, Takahashi H, Lee MTM et al. Determinants of the over-anticoagulation response during warfarin initiation therapy in Asian patients based on population pharmacokinetic-pharmacodynamic analyses. PLoS ONE 9(8), e105891 (2014). [DOI] [PMC free article] [PubMed] [Google Scholar]
- 28.Takahashi H, Wilkinson GR, Caraco Y et al. Population differences in S-warfarin metabolism between CYP2C9 genotype-matched Caucasian and Japanese patients. Clin. Pharmacol. Ther 73(3), 253–263 (2003). [DOI] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.