Table 1.
Samples | Q30 1 | Raw Reads | Filtered Reads | Mapped Reads |
---|---|---|---|---|
PBS | 0.984 | 6,994,764 | 6,965,344 (99.6%) | 4,909,354 (70.5%) |
PEP | 0.983 | 7,348,062 | 7,309,726 (99.5%) | 5,090,978 (69.6%) |
12 h | 0.985 | 8,308,408 | 8,271,920 (99.6%) | 6,103,570 (73.8%) |
24 h | 0.982 | 8,315,180 | 8,274,926 (99.5%) | 6,085,915 (73.5%) |
1 Q30: Phred Quality Score; probability of incorrect base call: 1 in 1000. PBS: protoscoleces washed with PBS; PEP: protoscoleces washed with PBS + treatment with pepsin; 12 h: protoscoleces subjected to PBS + PEP + biphasic medium for 12 h; 24 h: protoscoleces subjected to PBS + PEP + biphasic medium for 24 h.