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. 2020 Jun 26;8(6):959. doi: 10.3390/microorganisms8060959

Table 1.

Microbiome of chronic sinusitis detection from common aerobic culture and next-generation sequencing (NGS).

SINNS1 SINNS2 SINNS3 SINNS4 SINNS5 SINNS6 SINNS7 SINNS8 SINNS9 SINNS10 SINNS11 SINNS12 SINNS13 SINNS14 SINNS15 SINNS16 SINNS17 SINNS18
Common aerobic culture
(Nasopharynx)
Staphylococcus aureus No beta Streptococcus
group A
No beta Streptococcus
group A
No beta Streptococcus
group A
Pseudomonas aeruginosa No beta Streptococcus
group A
No beta Streptococcus
group A
No beta Streptococcus
group A
No beta Streptococcus
group A
No beta Streptococcus
group A
Staphylococcus pneumoniae No beta Streptococcus
group A
No beta Streptococcus
group A
Haemophilus influenzae No beta Streptococcus
group A
No beta Streptococcus
group A
No beta Streptococcus
group A
No beta Streptococcus
group A
NGS 62.43% 48.81% 0.268% 2.59%
NGS: Aerobes
Staphylococcus aureus 62.43% 0% 0.006% 0% 0% 0% 0% 0.006% 0% 0.341% 0% 0.005% 0% 0% 0.003% 0.105% 0% 40.028%
Streptococcus pyogenes 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0%
Streptococcus pneumoniae 0% 0% 0% 0% 0% 0.011% 0% 0% 0% 0% 0.268% 0% 0.001% 0% 0% 0% 0% 0%
Haemophilus influenza 0% 0% 0% 0% 0% 21.003% 0% 0% 0% 0.057% 0% 0.001% 0.01% 2.59% 0% 0% 0% 0%
Moraxella catarrhalis 0% 0% 0% 0% 0% 0% 0% 0% 0.001% 0% 0% 0% 0% 0% 0% 0% 0% 0%
Pseudomonas aeruginosa 0% 0% 0% 0.001% 48.81% 0% 0.003% 0.003% 0% 0.118% 0% 0% 0% 0% 0% 0.012% 0.002% 0.117%
NGS: Anaerobes-
periodontopathogens
Porphyromonas gingivalis 0% 0% 0% 0% 0.001% (Saliva: 2.246%) 0% 0% 0.228% (Saliva: 0.598%) 0% 0.042% (Saliva: 0.322%) 0% 0% 0% 0.023% (Saliva: 0.246%) 0.001% (Saliva: 0.472%) 0.001% (Saliva: 0%) 0.2% (Saliva: 0.097%) 0%
Porphyromonas endodontalis 0% 3.352% (Saliva: 0.069%) 43.814% (Saliva: 0.039%) 0.008% (Saliva: 0.012%) 0% 0.001% (Saliva: 0.14%) 0.002% (Saliva: 0.03%) 2.33% (Saliva: 10.161%) 21.005% (Saliva:0.254 %) 44.197% (Saliva:0.355 %) 0.003% (Saliva: 0.245%) 11.3% (Saliva: 1.223%) 19.587% (Saliva:0.002 %) 15.89% (Saliva:0.834 %) 0.286% (Saliva:0.468%) 11.323% (Saliva: 0.856%) 31.165% (Saliva: 1.186%) 0.007% (Saliva: 0.015%)
Fusobacterium nucleatum 0% 1.57% (Saliva: 0.133%) 0.487% (Saliva: 0.089%) 0% 0% 0% 0% 0.183% (Saliva: 0.789%) 0.942% (Saliva: 0.031%) 1.151% (Saliva: 0.214%) 0.005% (Saliva: 0.125%) 9.509% (Saliva: 1.027%) 0.219% (Saliva: 0.026%) 7.014% (Saliva: 0.383%) 0.001% (Saliva: 0.284%) 11.012% (Saliva: 0.154%) 20.261% (Saliva: 2.068%) 0%
Prevotella oris 0% 27.092% (Saliva: 1.31%) 28.478% (Saliva: 0.15%) 0.014% (Saliva: 0.02%) 0% 0% 0.001% (Saliva: 0.03%) 0.986% (Saliva: 8.238%) 0.004% (Saliva: 0.001%) 11.349% (Saliva: 0.427%) 0.003% (Saliva: 0.036%) 6.93% (Saliva: 1.219%) 0.004% (Saliva: 0.032%) 0.003% (Saliva: 0.019%) 0.256% (Saliva: 0.03%) 0.001% (Saliva: 0.025%) 0.001% (Saliva: 0.111%) 0.002% (Saliva: 0.262%)
Prevotella intermedia 0% 0.159% (Saliva: 0.024%) 0.076% (Saliva: 0.022%) 0.014% (Saliva: 0.02%) 0% 0% 0.001% (Saliva: 0.288%) 0% 0% 0% 0% 0.001% (Saliva: 0.223%) 0.584% (Saliva: 0.001%) 0.061% (Saliva: 0.17%) 0.001% (Saliva: 0.753%) 0.002% (Saliva: 0.002%) 0% 0%
Treponema Denticola 0% 0% 0% 0% 0% 0% 0% 0.146% (Saliva: 0.469%) 2.507% (Saliva: 0.012%) 0.001% (Saliva: 0.07%) 0% 0% 0% 0.001% (Saliva: 0.073%) 0% 0.001% (Saliva: 0.002%) 0.713% (Saliva: 0.42%) 0%
Tannerella Forsythia 0% (Saliva: 0.066%) 0.001% (Saliva: 0.092%) 0.001% (Saliva: 0.003%) 0% 0% 0.001% (Saliva: 0.017%) 0.038% (Saliva: 0.17%) 0.007% (Saliva: 0.011%) 0.015% (Saliva: 0.046%) 0% 0.247% (Saliva: 0.056%) 0% 0.016% (Saliva: 0.022%) 0% 0.002% (Saliva: 0.002%) 0.733% (Saliva: 0.264%) 0%