Figure 4.
Surprisal Analysis of Transcriptome Changes during (De-)acclimation to High Light, Heat, and Cold
(A) Time course of the constraint potentials (CPs) derived from the transcriptome profiles of (de-)acclimation samples (high light [HL], heat, and cold). The minor constraints (4–10) are shown as gray lines; the acclimation phase is indicated by a gray square. Sign changes of CPs indicate reconfiguration of the underlying molecular dynamics.
(B) Circle correlation plots derived from partial least-squares regression analysis of CP1–3 of the time course shown in (A) and the physiological profiles depicted in Figure 1. Antho, anthocyanin content; Chl, chlorophyll content; FW, fresh weight; ФII, effective quantum yield of PSII; Fv/Fm, maximum quantum efficiency of PSII. Lines of CP1–CP3 in this plot were mirrored to reflect the fact that constraints contain positive and negative weights. Therefore, it is not possible to distinguish whether the effect was caused by positive or negative correlation.
See also Figure S7.