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. Author manuscript; available in PMC: 2021 Jun 26.
Published in final edited form as: J Nat Prod. 2020 May 28;83(6):1950–1959. doi: 10.1021/acs.jnatprod.0c00212

Quantum Mechanics-Based Structure Analysis of Cyclic Monoterpene Glycosides from Rhodiola rosea

Yu Tang , J Brent Friesen ‡,§, David C Lankin , James B McAlpine , Dejan Nikolić , Matthias Niemitz , David S Seigler , James Graham , Shao-Nong Chen †,, Guido F Pauli †,‡,*
PMCID: PMC7384765  NIHMSID: NIHMS1608464  PMID: 32463230

Abstract

NMR- and MS-guided metabolomic mining for new phytoconstituents from a widely used dietary supplement, Rhodiola rosea, yielded two new (+)-myrtenol glycosides, 1 and 2, and two new cuminol glycosides 3 and 4, along with three known analogues 57. The structures of the new compounds were determined by extensive spectroscopic data analysis. Quantum Mechanics-driven 1H iterative Full Spin Analysis (QM-HiFSA) decoded the spatial arrangement of the methyl groups in 1 and 2, as well as other features not recognizable by conventional methods, including higher order spin-coupling effects. Expanding applied HiFSA methodology to monoterpene glycosides advances the toolbox for stereochemical assignments, facilitates their structural dereplication, and provides a more definitive reference point for future phytochemical and biological studies of R. rosea as a resilience botanical. Application of a new NMR data analysis software package, CT, for QM-based iteration of NMR spectra is also discussed.

Graphical Abstract

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Rhodiola rosea L. (commonly known as roseroot, rose root, or goldenroot) in the family Crassulaceae has emerged as a popular botanical dietary supplement exhibiting adaptogenic effects in situations of decreased performance such as fatigue and sensation of weakness.13 The adaptogenic or resilience-enhancing activities of this plant are purported to increase the body’s nonspecific resistance, reduce stress-induced impairments, and ameliorate disorders to neuro-endocrine and immune systems.13 The underground parts of R. rosea have been used in folk medicine in the western Siberia Region of Russia, particularly in the Altai region, as means of relieving fatigue and increasing energy, especially during extended periods of strenuous activity. Traditional use of R. rosea as a tonic in Siberian and Russian medicine stimulated extensive research leading to early experimental research revealing that R. rosea prolonged endurance in a number of animal studies, as well as clinical evaluations that showed a clear stimulating effect on mental activity and on the magnitude and intensity of mechanical work, particularly against a background of fatigue.4

A comprehensive literature survey revealed that the major constituents in this plant are proanthocyanidins, phenylpropanoids, phenylethanoids, flavonoids, monoterpenoids, and cyanogenic glycosides. However, documented pharmacological and mechanistic studies mainly focus on Rhodiola extract, salidroside (a phenylethanoid) and the rosavins (phenylpropanoids) as its major constituents. While monoterpenes are widely distributed in R. rosea, they have not been studied systematically, and only a few investigations have described the bioactivity of Rhodiola monoterpenes. A report by Van Diermen et al. concluded that extracts of R. rosea showed a potentially beneficial effect associated with depression and senile dementia.5 Moreover, a monoterpene glycoside, rosiridin, obtained from the extract by bioassay-guided isolation showed the highest activity among the isolates.5 However, from a bioactivity and mechanism-of action as well as from a chemodiversity perspective, R. rosea can be considered underexplored, especially as the monoterpenoids occurring in this species likely play a role in the adaptogenic effect. Thus, it was considered of interest to explore the structural diversity of R. rosea monoterpenoids in order to potentially offer new aspects in botanical adaptogen research.

Owing to the polarity characteristics of monoterpene glycosides, a centrifugal partition chromatography (CPC) technique played a critical role in the separation workflow. CPC has become increasingly useful in natural products research due to its liquid-only character, which results in minimal sample loss as well as in its ability to target specific metabolites via the fine tuning of biphasic solvent systems.6,7

An enduring analytical challenge relates to stereochemical assignments of monoterpene glycosides, both for the aglycone and the sugar moieties. The occurrence of higher order coupling effects is prominent in these compounds, resulting from the proximity of highly coupled hydrogens in both the monoterpene and the sugar moieties. Quantum Mechanics-based 1H full Spin Analysis (QM-HiFSA), built on the long-known concept of Full Spin Analysis (FSA), primarily for the interpretation of 1D 1H NMR spectra, was employed to facilitate structural characterization. HiFSA enabled the extraction of highly accurate J and δ values, despite the presence of complex, non-first-order spin systems; see refs.8,9 and references therein for a historic perspective and summary of J coupling, virtual coupling, and FSA development of applications. While HiFSA is generally applicable, even to high molecular weight “small” molecules, available FSA tools have long overcome prior limitations in QM calculations of the frequently observed large spin systems. In practice, the most prominent factors that affect HiFSA for a given molecule are the degrees of freedom given by the (frequently limited) quality of the spectroscopic data and the prior knowledge (level of spectroscopic interpretation) available to inform the iterative process.

Chemical Formulas

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RESULTS AND DISCUSSION

Cyclic Monoterpene Glycosides from R. rosea.

Four pinane glycosides 1, 2, 5, and 6 together with three menthane glycosides 3, 4, and 7 were isolated from the rhizomes/roots of R. rosea. Among the isolates were four new structures, including two myrtenol glycosides, 1 and 2, and two cuminol glycosides, 3 and 4. The structures of the new compounds were determined by a combination of 1D/2D NMR spectroscopy, LC-MS, and QM-HiFSA.

Higher Order Effects and Structural Analysis of the Sugar Residue of Glycosides.

The pyranoid forms of glucose (glcp) and arabinose (arap), as well as the furanoid form of arabinose (araf) are the predominant sugar moieties in Rhodiola monoterpene glycosides.1,10 In this study, the assignment of glucose and arabinose to their d- and l-series was based largely on the close matching of the 1H and 13C NMR resonances relative to corresponding resonances in the literature in combination with enzymatic hydrolysis. The 1H NMR spectra of sugar moieties are readily misinterpreted due to the presence of higher order spin coupling effects.8,9,11,12 Such effects are caused whenever the chemical shift differences (Δδ) and coupling constants (J) of resonances within a spin system are of similar magnitude.8,9 Notably, such instances are abundant in natural products and other organic compounds, and frequently lead to the designation of “multiplets” and corresponding lack of constitutional and configurational evidence.

Precise 1H NMR profiles of the four new compounds, 14, were generated using the PERCH NMR iteration software13 to unambiguously assign the partially complex signals of the sugar moieties (Table 1). In contrast to the glucose moiety present in 2 and 4, the counterparts in 1 and 3 represent prototypical examples of higher order effects (Figure 1). The 1H NMR signals of H-2′ and H-5′ in the β-glucose moieties of 1 and 3 are subject to particularly pronounced higher order effects. The deviations of the signals of H-2′ and H-5′ from the expected dd and ddd spin patterns, respectively, can be explained by the close resonance proximity between their directly coupled neighbors, H-3′ and H-4′, which show only subtle differences in their chemical shifts (Δδ) of only 0.0093 ppm in 1 and 0.011 ppm in 3, which can be readily determined even at 400 MHz. When elucidating the relative configuration of the sugar residues of an unknown Rhodiola monoterpene, H-2′ has the potential to serve as a 1H NMR marker signal. This is due to the fact that its chemical shift resides in a relatively uncrowded region of the spectrum, while the higher order effects are caused by the resonance proximity of H-3′ and H-4′. As shown in Figure 1, both 1 and 3 contain the α-l-arabinopyranosyl-(1→6)-β-d-glucopyranosyl residue, in which H-2′ shows relatively complex 1H NMR patterns. H-2′ in 2 and 4 containing the β-d-glucopyranosyl and α-l-arabinofuranosyl-(1→6)-β-d-glucopyranosyl groups, respectively, show the more triplet-like peak pattern. While slightly different from the triplet-like splitting pattern of H-2′ in 2, upon closer inspection, the signal for H-2′ in 4 shows a pseudo triplet-like splitting pattern (Figure S21, Supporting Information).

Table 1.

Summary of the QM-HiFSA Analysis of the 1H,1H J Coupling Constants of the Sugar Moieties in 1–4

glcp (1) multiplicity iterated J coupling constants arap (1) multiplicity iterated J coupling constants
H-1’ H-2’ H-3’ H-4’ H-5’ H-6’a H-6’b H-1” H-2” H-3” H-4” H-5”a H-5”b
H-1’ d 7.87 H-1” d 6.86
H-2’* dd 7.87 9.25 H-2” dd 6.86 8.75
H-3’* ddd 9.25 8.70 H-3” dd 8.75 3.47
H-4’* dd 8.70 9.67 H-4” ddd 3.47 3.25 1.80
H-5’* ddd 9.67 2.35 5.62 H-5”a dd 3.25 −12.46
H-6’a dd 2.35 −11.39 H-5”b dd 1.80 −12.46
H-6’b dd 5.62 −11.39
glcp (2)
H-1’ d 7.85
H-2’ dd 7.85 9.26
H-3’ ddd 9.26 9.02 −0.33
H-4’ dd 9.02 9.79
H-5’ dddd −0.33 9.79 2.31 5.90
H-6’a dd 2.31 −11.92
H-6’b dd 5.90 −11.92
glcp (3) arap (3)
H-1’ d 7.85 H-1” d 6.86
H-2’* dd 7.85 9.21 H-2” dd 6.86 8.80
H-3’* dd 9.21 9.14 H-3” dd 8.80 3.50
H-4’* dd 9.14 9.68 H-4” ddd 3.50 3.20 1.81
H-5’* ddd 9.68 2.22 5.90 H-5”a dd 3.20 −12.49
H-6’a dd 2.22 −11.51 H-5”b dd 1.81 −12.49
H-6’b dd 5.90 −11.51
glcp (4) araf (4)
H-1’ d 7.85 H-1” dd 1.53 0.58
H-2’ dd 7.85 9.28 H-2” dd 1.53 3.36
H-3’ dd 9.28 9.07 H-3” ddd 0.58 3.36 5.98
H-4’ dd 9.07 9.53 H-4” ddd 5.98 3.30 5.35
H-5’ ddd 9.53 2.38 6.14 H-5”a dd 3.30 −11.87
H-6’a dd 2.38 −11.18 H-5”b dd 5.35 −11.87
H-6’b dd 6.14 −11.18
*

Signal exhibits higher order effects; the multiplicities given are under first order assumptions, but represent distorted “multiplets”.

Figure 1.

Figure 1.

QM-HiFSA spin simulation analysis of the resonances of H-2’–H-5’ of the glucose portions of 14 (A–D), as well as the 1D-TOCSY spectra of glucose in 2 (E) and 4 (F). The calculated spectra and experimental spectra (400 MHz, 298 K) are shown in red and blue, respectively (* denotes impurity signals).

Owing to the signal overlap of the residual solvent (CHD2OD) signal with the resonances of H-3′ and H-4′ in both 2 and 4, 1D TOCSY spectra were acquired. Detailed inspection of these spectra showed that the outer sub-peaks of H-3′ and H-4′ in 4 are superimposed (Figure 1) at 400 MHz, while the outer sub-peaks of H-3′ and H-4′ in 2 are resolved. This observation indicates that the higher order effects have a tendency to be more obvious whenever the (sub)peaks of neighboring hydrogen resonances overlap. Such an overlap of outer (sub)-peaks of adjacent hydrogens can be regarded as diagnostic for the presence of higher order effects. In such situations, the conventional determination of J values by manual measurement of line distances inevitably leads to significant errors: measured intervals between peaks are primarily line distances, not coupling constants. For example, H-2′ in 1 and 3 appears as a multiplet with more than two couplings from a point-of-view of splitting pattern. However, the QM-HiFSA revealed that H-2′ is a “higher order dd” resulting from two couplings and all the higher order spin coupling behavior, which is due to the proximity of the resonances of the coupled H-3’ and next-coupled H-4’. Collectively, the QM-HiFSA approach can provide precise and field independent δ/J values for the identification and rapid dereplication of congeneric compounds by commonly available 1D 1H NMR spectroscopy.

Structure Elucidation of Compounds 1 and 2.

Both compounds were obtained as colorless solids, and their molecular formulae were determined as C21H34O10 and C16H26O6, respectively, by HRESIMS. The hydrogen signals in the δ 3.1–4.4 ppm region of the 1H NMR spectra indicated that 1 and 2 contained a disaccharide and a monosaccharide moiety, respectively. These substituents were identified as an α-l-arabinopyranosyl-(1→6)-β-d-glucopyranosyl and a β-d-glucopyranosyl residue. Additionally, the 1H NMR spectra of 1 and 2 (Table 2) showed a pair of geminal methyls around δ 0.85 and 1.31 attached to a quaternary carbon, as well as an olefinic hydrogen resonating around δ 5.58 (tt-like). All of the data appeared to resemble the NMR data for (−)-myrtenyl α-l-arabinopyranosyl-(1→6)-β-d-glucopyranoside (5) and (−)-myrtenyl β-d-glucopyranoside (6).10,14 These are characteristic of a compound class common to Rhodiola species.14 The only obvious difference between the two pairs of compounds was that the C-10 methylene hydrogens exhibited a ΔδH-10a,H-10b around 0.09 ppm for 1 and 2 and around 0.21 ppm for 5 and 6, respectively (Figure 2). Moreover, 2D NMR data (COSY, HSQC, and HMBC) revealed that the aglycone of all four compounds shared the same 2D structure. Collectively, from a point-of-view of ring strain, the array of acquired spectroscopic data are most compatible with the conclusion that 1 and 2 share the stereochemically identical aglycone, and that this moiety is the enantiomeric counterpart of the aglycone in 5 and 6. Consequently, 1 and 2 were identified as (+)-myrtenyl α-l-arabinopyranosyl-(1→6)-β-d-glucopyranoside and (+)-myrtenyl β-d-glucopyranoside, respectively. This marks the first report of an enantiomeric aglycone among Rhodiola monoterpene glycosides.

Table 2.

The1H and13C NMR Data of 1–4a,b

position 1 2 3 4
δH (J in Hz) δC δH (J in Hz) δC δH (J in Hz) δC δH (J in Hz) δC
1 2.2453, td-like (5.84, 5.42, −1.43, −0.21, −0.20) 44.51 2.2447, td-like (5.86, 5.42, −1.40, −0.22, −0.20) 44.47 136.43 136.21
2 145.92 146.06 7.3388, dt-like (7.87, 1.88, −0.57, 0.57, −0.31, 0.28) 129.46 7.3393, dt-like (7.90, 2.01, −0.52, 0.51, −0.47, 0.27) 129.58
3 5.5981, dddddd (3.09, 2.91, −1.67, −1.43, 1.35, −1.21) 121.75 5.5840, dddddd (3.06, 2.87, −1.73, −1.40, 1.33, −1.13) 121.58 7.2044, dt-like (7.87, 1.85, 0.57, 0.49, 0.20, −0.18) 127.28 7.2077, dt-like (7.90, 1.85, 0.56, 0.51, −0.21, 0.20) 127.29
4a 2.3296, dddddd (−17.83, 3.09, 2.88, 1.89, 1.47, 0.48) 32.28 2.3277, dddddd (−17.78, 3.06, 2.92, 1.87, 1.42, 0.45) 32.27 149.65 149.71
4b 2.2609, ddddd (−17.83, 2.91, 2.51, 2.30, −1.67) 2.2616, ddddd (−17.78, 2.87, 2.55, 2.39, −1.71)
5 2.0864, ddddd (5.84, 5.83, 2.88, 2.51, 1.35) 42.13 2.0881, ddddd (5.86, 5.82, 2.92, 2.55, 1.33) 42.12 7.2044, dt-like (7.87, 1.85, 0.57, 0.49, 0.20, −0.18) 127.28 7.2077, dt-like (7.90, 1.85, 0.51, 0.56, −0.21, 0.20) 127.29
6a 2.4248, dddd (−8.67, 5.83, 5.42, 0.17) 32.44 2.4256, dddd (−8.66, 5.82, 5.42, 0.19) 32.42 7.3388, dt-like (7.87, 1.88, −0.57, 0.57, 0.28, −0.31) 129.46 7.3393, dt-like (7.90, 2.01, 0.51, −0.52, −0.47, 0.27) 129.58
6b 1.1984, ddd (br d) (−8.67, 0.30, 0.16) 1.1992, ddd (br d) (−8.66, 0.29, 0.27)
7a 38.93 38.91 4.8740, ddd (br d) (−11.51, 0.49, −0.31) 71.77 4.8541, ddd (br d) (−11.29, 0.56, −0.47) 71.74
7b 4.6302, ddd (br d) (−11.51, −0.57, 0.20) 4.6197, ddd (br d) (−11.29, −0.52, 0.20)
8 0.8529, ddd (br s) (0.35, −0.21, 0.16) 21.40 0.8524, ddd (br s) (0.38, 0.27, −0.20) 21.37 2.8862, septet (6.94, 6.91, −0.24) 35.17 2.8883, septet (6.93, 6.92, 0.27) 35.17
9 1.3069, ddddd (br s) (0.48, 0.35, 0.30, −0.20, 0.17) 26.67 1.3056, ddddd (br s) (0.45, 0.38, 0.29, −0.22, 0.19) 26.65 1.2344, d (6.94) 24.46 1.2364, d (6.93) 24.46
10a 4.1440, dddd (−12.33, 2.30, 1.89, −1.67) 72.67 4.1635, dddd (−12.39, 2.39, 1.87, −1.73) 72.46 1.2344, d (6.91) 24.46 1.2362, d (6.92) 24.46
10b 4.0511, dddd (−12.33, −1.67, 1.47, −1.21) 4.0730, dddd (−12.39, −1.71, 1.42, −1.13,)
1’ 4.2659, d (7.87) 102.77 4.2680, d (7.85) 102.67 4.3489, d (7.85) 103.21 4.3365, d (7.85) 103.05
2’ 3.1946, dd (9.25, 7.87) 74.99 3.1924, dd (9.26, 7.85) 75.04 3.2455, dd (9.21, 7.85) 75.09 3.2315, dd (9.28, 7.85) 75.10
3’ 3.3309, dd (9.28, 8.70) 77.97 3.3341, t-like (9.26, 9.02, −0.33) 78.13 3.3407, t-like (9.21, 9.14) 77.93 3.3328, dd (9.28, 9.07) 77.98
4’ 3.3402, dd (9.67, 8.70) 71.62 3.2816, t-like (9.79, 9.02) 71.66 3.3518, t-like (9.68, 9.14) 71.68 3.2975, dd (9.53, 9.07) 71.99
5’ 3.4006, ddd (9.67, 5.62, 2.35) 76.87 3.2231, dddd (9.79, 5.90, 2.31, −0.33) 77.92 3.4484, ddd (9.68, 5.90, 2.22) 76.99 3.4362, ddd (9.53, 6.14, 2.38) 76.81
6’a 4.0842, dd (−11.39, 2.35) 69.38 3.8622, dd (−11.92, 2.31) 62.75 4.1185, dd (−11.51, 2.22) 69.48 4.0528, dd (−11.18, 2.38) 68.12
6’b 3.7351, dd (−11.39, 5.62) 3.6651, dd (−11.92, 5.90) 3.7564, dd (−11.51, 5.90) 3.6441, dd (−11.18, 6.14)
1’’ 4.3242, d (6.86) 105.12 4.3472, d (6.86) 105.21 5.0065, dd (1.53, 0.58) 110.00
2’’ 3.5945, dd (8.75, 6.86) 72.36 3.6097, dd (8.80, 6.86) 72.40 4.0334, dd (3.36, 1.53) 83.29
3’’ 3.5292, dd (8.75, 3.47) 74.19 3.5106, (8.80, 3.50) 74.20 3.8451, ddd (5.98, 3.36, 0.58) 78.94
4’’ 3.8082, ddd (3.47, 3.25, 1.80) 69.46 3.7997, ddd (3.50, 3.20, 1.81) 69.50 3.9992, ddd (5.98, 5.35, 3.30) 85.85
5’’a 3.8681, dd (−12.46, 3.25) 66.69 3.8675, dd (−12.49, 3.20) 66.73 3.7538, dd (−11.87, 3.30) 63.07
5’’b 3.5400, dd (−12.46, 1.80) 3.5182, dd (−12.49, 1.81) 3.6539, dd (−11.87, 5.35)
a

The 1H and 13C NMR data were acquired in methanol-d4 at 400 and 100 MHz, respectively.

b

The δH (in ppm) and J (in Hz) values were determined by QM-HiFSA analysis.

Figure 2.

Figure 2.

The importance of relative chemical shifts (Δδ) as indirect, but significant, structural evidence demonstrated for H-10a and H-10b in 1, 2, 5, and 6.

HiFSA Analysis of 1.

In order to corroborate the structural assignments and facilitate the future structural dereplication of congeneric myrtenol glycosides from Rhodiola species and other organisms, the spin-spin coupling patterns in 1 and 2 were analyzed via the QM-HiFSA method15 using the PERCH NMR software tools. Briefly, 3D molecular structures were prepared in the PERCH Molecular Modeling Software (MMS) module and converted to a 3D MMS file. The key 1H spin parameters (δH, nJH,H) were predicted and then optimized in the PERCH iterator using D- and T- modes for integral-transform fitting and total-line shape fitting, respectively, until the root-mean-square (RMS) differences were less than 0.1 (final values: 0.030 for 1; 0.042 for 2), indicating excellent agreement between calculated and experimental data (Figure 3). Specifically, this analysis revealed, taking 1 for example, that the geminal hydrogens at C-6 displayed conspicuously different signal patterns. The Quantum Interaction and Linkage Table (QuILT) (Figure 4) is a QM-HiFSA based J-correlation map that enables the analysis of a homonuclear data set and allows the structural assignments to be based on clearly defined relationships.16 The signal for H-6a appeared as a ddd and exhibited a large 2J coupling of −8.67 Hz to its geminal partner, as well as two mid-sized 3J couplings of 5.42 and 5.83 Hz to its neighbors H-1 and H-5, respectively. In contrast, H-6b appeared with reduced multiplicity as a doublet only, although it also has 3J coupling relationships with H-1 and H-5. The iterative QM-based analysis showed that these coupling constants were <1 Hz, indicative of nearly 90° dihedral angles.

Figure 3.

Figure 3.

The 1H NMR fingerprint of compound 1 generated using the PERCH iteration tool (final RMS = 0.030). Comparison of the observed (blue, obtained in methanol-d4 at 400 MHz, 298 K) and calculated (red) 1H spectra, including residuals in green (* denotes an impurity signal).

Figure 4.

Figure 4.

The Quantum Interaction and Linkage Table (QuILT) summarizes the full J correlation map the aglycone portion of 1 produced by QM-HiFSA based on the 400 MHz 1D 1H NMR data. The number of bonds separating two coupled nuclei are color-coded: violet = 2J, blue = 3J, yellow = 4J, green = 5J, and pink = 6J. Multiplicities in parentheses are less than ~1 Hz. Couplings less than an absolute value of 0.10 Hz are given as “⌀” rather than being reported as blank cells, which would wrongly imply them being unknown or undetermined.

The lack of a detectable coupling between H-6b and H-1 indicated that the ddd splitting pattern of the signals of H-1, which is adjacent to H2-6, should result from long-range couplings. Closer inspection of the QM-HiFSA profile revealed a large 4J W-coupling of 5.84 Hz to H-5, in addition to a 4J coupling of −1.43 Hz to H-3, which altogether explains the ddd resonance pattern for H-1. The remarkable magnitude of the 4JH-1,H-5 W-coupling together with unobservable 3JH-1,H-6b and 3JH-5,H-6b coupling constants are in line with prior observations of cyclobutane H,H J-coupling relationships.16,17

Another intriguing observation was that both singlet-like Me-8 and Me-9 resonances exhibited several 4J and 5J long-range couplings (Figure 4). Among these long-range couplings, the 5J coupling between Me-9/H-4a (0.48 Hz), resulting from the planar 5-bond zigzag arrangement, enabled the determination of the positioning of H-4a and Me-9 as being α-oriented (Figure 5). Utilizing the QM-HiFSA derived, highly precise chemical shifts, Me-9 could be irradiated with high selectivity to generate a homonuclear decoupled 1D 1H NMR spectrum of 1 (Figure 6). The existence of a 5JH-4a,H-9 zig-zag coupling pathway was further confirmed by this homodecoupling experiment.

Figure 5.

Figure 5.

The occurrence of well-resolved and near-identical (ΔJ = 30 mHz) 5JHH couplings in 1 and 2 are evidence for the highly congruent zig-zag arrangement of their connecting bonds and, thus, their identical relative stereochemistry in both compounds. This J-coupling relationship was also verified through H,H homodecoupling experiments (see main text). Notably, the different sugar moieties apparently do not affect the geometry of the multicyclic monoterpene moiety and, thus, its zig-zag long-range coupling pathway.

Figure 6.

Figure 6.

Line-shape comparison for H-4a in 1 between homodecoupled (top/blue) and non-homodecoupled (red) 1H NMR spectra. A Lorentzian–Gaussian apodization function of LB = −0.3 Hz and GF = 0.05 was applied to both. The top/blue signals resulted from homodecoupling irradiating Me-9 and exhibit a sharper line-shape in the H-4a resonance, with sub-peaks more observable when compared with that of the corresponding signal in the bottom/red spectrum.

Finally, prominent mutual cross peaks between Me-8/H-4b and Me-9/H-6a in the NOESY spectrum (Figure S6, Supporting Information) unambiguously reconfirmed the assignment that was first based on the QM-HiFSA analysis. Moreover, additional 5J couplings between Me-9/H-4a and Me-9/H-6a (0.17 Hz) were detected that explain why the peak height of the Me-9 resonance was slightly lower than that of Me-8, thereby contributing to the precise assignment of the Me-8 and Me-9 resonances. Besides the aforementioned long-range couplings, three additional allylic (4JH-1,H-3, 4JH-3,H-10a, and 4JH-3,H-10b) and four homoallylic couplings (5JH-4a,H-10a, 5JH-4a,H-10b, 5JH-4b,H-10a, and 5JH-4b,H-10b) were observed in the QuiLT (Figure 4) in the 1.2–2.3 Hz range. Again, QM-HiFSA based QuiLT facilitates the verification of all coupling constants and detection of long-range couplings (≥4J). Therefore, it has the potential to serve as a useful tool to advance structural analysis, especially for those compounds like 1 containing allylic, homoallylic, and W-type couplings. Although PERCH is no longer available commercially,18 the QM-based line-shape calculation is featured in other available software,18 such as CT (currently in beta stage; reads MOL, JDX, and MMS files as input) and ChemAdder (currently in alpha stage).18,19,20 Reference 18 provides and overview of available software tools, as well as a historic perspective and contemporary applications of (Hi)FSA methodology. The consistency of HiFSA results achieved with different tools was assessed using the CT (Cosmic Truth) software, using 1 as a test case. After the PERCH generated initial MMS file was modified according to the final PMS file, the former was imported into CT and optimized by automatic quantum mechanics iteration until an agreement between the calculated and the experimental spectrum was reached (Figure S8, Supporting Information). As shown in Figure 7, the CT generated J and δ values closely resemble those of PERCH with largest Δδ and ΔJ of 0.00017 ppm and 0.45 Hz, respectively. The near identical J and δ values resulting from the PERCH- and CT-based analyses indicates suitability of CT for comprehensive spin analysis of NMR spectra.

Figure 7.

Figure 7.

Differences in the chemical shifts (in ppm, A) and coupling constants (in Hz, B) determined by HiFSA using the CT vs the PERCH software tools. As shown in 7A, the chemical shifts have an excellent agreement between CT and PERCH, for all the resonances 0≤Δδ≤0.00017 ppm. 7B shows that the coupling constants also exhibit a good fit with the largest difference for ΔJH-4b,H-10b no more than 0.45 Hz.

Structure Elucidation of Compounds 3 and 4.

Both compounds had the same molecular formula, C21H32O10, as determined by HRESIMS. The 1H NMR data of 3 and 4 (Table 2) displayed the typical dt-like higher-order resonances of an aromatic AA′XX′ spin system at around δ 7.33 and δ 7.20, as well as the hydrogen signals of an isopropyl group featuring a septet at around δ 2.88 and two superimposable doublets at δ 1.23. These characteristic signals suggested that 3 and 4 are derivatives of 7,21 a cuminol glucoside with a single glucose moiety. Different from 7, the hydrogen signals in the δ 3.2–5.0 region indicated that both 3 and 4 contained disaccharide moieties. On the basis of comprehensive 1D (Table 2) and 2D NMR data (Figures S1719 and S2325, Supporting Information), especially the HMBC correlations between H2-6′ and C-1′′ for 3 and 4, the sugar moieties were identified as α-l-arabinopyranosyl-(1→6)-β-d-glucopyranosyl in 3 and α-l-arabinofuranosyl-(1→6)-β-d-glucopyranosyl in 4, respectively. HMBC experiments (Figures S16 and S21, Supporting Information) confirmed the attachment of the disaccharide moieties at C-7 for both 3 and 4. Hence, 3 and 4 were determined as cuminyl α-l-arabinopyranosyl-(1→6)-β-d-glucopyranoside and cuminyl α-l-arabinofuranosyl-(1→6)-β-d-glucopyranoside, respectively. This is the first report of cuminol glycosides (3, 4, and 7) from the genus Rhodiola.

QM-HiFSA enabled the identification of all couplings, including long-range couplings. For example, the H-1′′ resonance in 4 appeared as a broad doublet that made it difficult to designate its multiplicity by visual spectroscopic interpretation. The QM-HiFSA method (Table 1) revealed its actual multiplicity as a dd with a 3J coupling of 1.53 Hz with H-2′′ and a 4J long-range coupling of 0.58 Hz with H-3′′. Moreover, QM-HiFSA established the long-range benzylic couplings8,22 within 3 and 4 as shown in Figure 8.

Figure 8.

Figure 8.

Diagnostic long-range benzylic couplings (4,5JHH) in 3 and 4

Since biological activity research of the monoterpene glycosides requires further study and residual complexity could result in the misassignment of biological activity,23 therefore, the purity of all four new isolates was determined using the 100% qHNMR method (Table S1, Supporting Information),24 confirming the suitability of isolates for QM-based spectral analysis and biological follow-up studies.

CONCLUSION

Thus, in addition to the two known Rhodiola characteristic (−)-myrtenol glycosides (5 and 6) and one known cuminol glucoside (7), four new (+)-myrtenol cuminol glycosides (1/2 and 3/4, respectively) were isolated and characterized. This is the first report of myrtenol glycosides with enantiomeric aglycones and of cuminol glycosides in the genus Rhodiola. Concerning the wide use of R. rosea as an adaptogenic dietary supplement, the (+)-myrtenol glycosides (1 and 2) and cuminol glycosides (3, 4, and 7) might have potential to serve as new marker compounds, at least for chemotaxonomic standardization.

Given the complexity of the 1H NMR signals, HiFSA-based spin-spin coupling analysis was applied to facilitate the elucidation and distinction of these structurally near-identical parts of compounds. This is the first report of precisely matched simulated and observed NMR spectra for the characterization of cyclic monoterpene glycosides. Detailed QM-HiFSA-based evaluation of both the sugar moieties as well as the aglycone portions of 14 provides a blueprint for future rapid dereplication and identification of analogous monoterpene glycosides that likely occur in R. rosea and other organisms. Moreover, the precision of the QM-based interpretation enables advanced qNMR assays for future botanical standardization of Rhodiola botanicals, as well as advances the purity analysis of glycosides via full resolution of the strong peak overlap in the range of the stereoisomeric 1H NMR sugar resonances. While qHNMR spectra are most suitable source data, equally valid spin, spin coupling information can be obtained from 1H NMR spectra acquired using in non-quantitative conditions as long as incomplete relaxation can be taken into account, such as in PERCH and CT. In these instances, the number of data points in the time domain (TD) and the recycle delay time need to be sufficiently long to resolve all J couplings, which is typically the case when using default settings in properly installed NMR spectrometers.

While more sophisticated 2D NMR techniques, such as PSYCHEDELIC, HSQC-TOCSY IPAP, HMBC IPAP, and many others, are in principle capable of deriving long-range coupling constants from targeted compounds, implementation on spectrometers is scarce, documented applications are few, and published cases reveal limitations that point to the need of QM-based analysis.25 In comparison, as 1D 1H NMR spectra are both ubiquitous and essential for structural dereplication and elucidation, this enables HiFSA analysis for every compound. Furthermore, the magnetic field independence of HiFSA facilitates the reproduction of outcomes across all NMR instruments, making it also valuable for 2D correlation spectra as it can confirm whether or not their information is consistent with the 1D 1H NMR data. As such, it becomes a matter of scientific rigor to provide HiFSA profiles as essential structural information, especially when they can be obtained with reasonable effort.

EXPERIMENTAL SECTION

General Experimental Procedures.

Optical rotations at the sodium D line (589 nm) were measured with a PerkinElmer 241 digital polarimeter (Waltham, MA, USA) using a quartz cell with a path length of 100 mm in MeOH. NMR experiments were performed on a JEOL Resonance Inc. JNMR-ECZ400/L1 (Akishima, Tokyo, Japan) 400 MHz NMR spectrometer. The instrument was equipped with a 5-mm 400 MHz broadband Z-gradient high-resolution SuperCool NMR probe with a liquid nitrogen loop cooling system (operating temperature <85 K). The QM-HiFSA calculations were carried out using PERCH NMR spin simulation software (v.2010.1, PERCH Solutions, Ltd., Kuopio, Finland). CT is currently in beta version for testing and an active license is available by contacting ct@nmrsolutions.fi. The 3D models were constructed using Chem 3D Pro (v. 18.1), and the structures were energy minimized using the MM2 module. HRESIMS analyses were carried out using a Waters 2695 (Milford, MA, USA) solvent delivery system connected to a Waters SYNAPT quadrupole/time-of-flight mass spectrometer. Semipreparative HPLC was performed with a YMC-ODS AQ semi-preparative column (10 × 250 mm, 5 μm) on a Waters 600 Delta system using MeOH-H2O or MeCN-H2O as the mobile phase at a flow rate of 3 mL/min. Visualization of the developed TLC plates were under UV light (254 and 365 nm) and then after spraying the plates with a solution using vanillin/H2SO4 (general purpose reagent). CPC separations were performed on an SCPE-250 centrifugal partition chromatography (CPC) extractor from Gilson Inc (Middleton, WI, USA). Solvents and reagents were purchased from Fisher Scientific (Hanover Park, IL, USA) and Sigma Aldrich (St. Louis, MO, USA). HPLC grade solvents were purchased from Sigma Aldrich and methanol-d4 (99.8 atom % D) was purchased from Cambridge Isotope Laboratories Inc. (Andover, MA, USA). The samples were weighed with a Mettler Toledo XS105 Dual Range analytical balance. A Pressure-Lok gas syringe (VICI Valco, Baton Rouge, LA, USA) was used for volumetric NMR sample preparation. TLC was performed on Alugram precoated 0.2 mm thick silica gel G/UV254 10 × 20 cm aluminum plates, Macherey-Nagel GmbH & Co. (Düren, Germany). Syringe filters (CHROMAFIL Xtra PTFE-20/13, pore size: 0.20 μm, 13 mm diameter; Macherey-Nagel, Düren, Germany) were used for CPC and HPLC sample filtration.

Plant Material.

The material (UIC/NIH Botanical Center code BC 877) was from Rhodiola rosea plants cultivated at the University of Alaska Experimental Farm near Palmer, AK. The original plants were from Norway, and their seeds were sourced from Arrgo, Alta., Canada (61 34.189’ N 149 15.336 W). Collection vouchers are deposited in the University of Illinois Herbarium under DS16452-DS16460.

Extraction and Isolation.

The pulverized rhizomes/roots (2.75 kg) were defatted by hexanes and CH2Cl2 successively, then extracted with distilled MeOH at room temperature four times (4 × 6 L) to afford the crude extract (680 g, semi-dry). The crude extracts (370 g, semi-dry) were dissolved in H2O and partitioned with a mixture of CHCl3/n-BuOH (1:4) to remove most of the proanthocyanidins (PACs). The upper phase (97 g, non-PAC portion) was chromatographed over an HP-20 column, eluted with a gradient of H2O/MeOH to afford 100% H2O, 30% MeOH, 50% MeOH, 70% MeOH, and 100% MeOH fractions (Fr.1–Fr.5), respectively. Fr.4 was fractionated by CPC (264 mL rotor, Sf = 0.54, flow rate 25 mL/min, 2500 rpm) into five fractions (Fr.4a–Fr.4e) using the CHCl3−MeOH−H2O (ChMWat) 9:7:3 solvent system, with the lower phase as a mobile phase (descending mode). Fr.4a was further fractionated by CPC into five fractions (Fr.4aa–Fr.4ae) with ChMWat 10:5:5 in descending mode (Sf = 0.73). Semiprep-HPLC of Fr.4ab was then carried out with 30% MeCN isocratic elution to afford three fractions (Fr.4ab1–Fr.4ab3). Fr.4ab2 was purified on semiprep-HPLC (55% MeOH) to furnish compound 7 (5.4 mg, tR = 13.7 min) and other three fractions (Fr.4ab2a, Fr.4ab2c, and Fr.4ab2d). Compounds 2 (7.5 mg, tR = 39.4 min) and 6 (1.6 mg, tR = 41.4 min) were isolated from Fr.4ab2d using semiprep-HPLC (22% MeCN). Fr.4ad was subjected to prep-HPLC (52% MeOH) to afford four fractions (Fr.4ad1–.4ad4. Fr.4ad1 was further purified by prep-HPLC (28% MeCN) to yield five fractions (Fr.4ad1a–4ad1e). Compounds 3 (47.1 mg, tR = 33.8 min) and 4 (4.2 mg, tR = 32.1 min) were obtained from Fr.4ad1c through prep-HPLC (35% MeOH). Separation of Fr.4ad2 through HPLC (50% MeOH) gave 1 (2.5 mg, tR = 47.2 min) and 5 (1.4 mg, tR = 49.4 min)

  • (+)-10-[α-l-arabinopyranosyl-(1→6)-β-d-glucopyranosyloxy]myrtenol (1): colorless solid; NMR (400 MHz, methanol-d4) see Table 2; HRESIMS m/z 469.2042 [M + Na]+, calcd for C21H34O10Na (−1.7 ppm), 469.2050.

  • (+)-(10-β-d-glucopyranosyloxy)myrtenol (2): colorless gum; NMR (400 MHz, methanol-d4) see Table 2; HRESIMS m/z 359.1693 [M + HCOO]-, calcd for C17H27O8 (−3.6 ppm), 359.1706.

  • 7-[α-l-arabinopyranosyl-(1→6)-β-d-glucopyranosyloxy]cuminol (3): colorless solid; NMR (400 MHz, methanol-d4) see Table 2; HRESIMS m/z 443.1918 [M - H]-, calcd for C21H31O10 (0.2 ppm), 443.1917.

  • 7-[α-l-arabinofuranosyl-(1→6)-β-d-glucopyranosyloxy]cuminol (4): colorless solid; NMR (400 MHz, methanol-d4) see Table 2; HRESIMS m/z 443.1926 [M - H]-, calcd for C21H31O10 (2.0 ppm), 443.1917.

Acquisition of qHNMR Spectra.

Samples were dissolved in 200 μL of methanol-d4 and transferred into 3 mm NMR tubes (Landisville, NJ, USA). All NMR experiments were performed at 298 K (25 °C) using standard JEOL pulse sequences. Chemical shifts (δ) are expressed in ppm with reference to the residual solvent signals (3.3100 ppm for 1H and 49.0000 ppm for 13C). The qHNMR spectra were acquired using standard qHNMR parameters,26 including a relaxation delay of 60 s, 46 receiver gain, and a 90° flip angle. NMR data were processed and analyzed using Mestrenova 12.0.4 software from Mestrelab Research S.L. (Santiago de Compostela, Spain). For qHNMR analysis, the following processing scheme was used: a mild Lorentzian-to-Gaussian window function (line broadening = −0.3 Hz, Gaussian factor = 0.05) was applied, followed by zero filling to 256k acquired data points before Fourier transformation. After manual phasing, a fifth-order polynomial baseline correction was applied.

Enzymatic Hydrolysis.

Enzymatic hydrolysis procedures were carried out according to the previously reported protocol with modifications.27 Compounds 1 (2.7 mg) and 3 (2.8 mg) were dissolved in 4 mL water with snailase (ca. 14 mg) at 40 °C for 24 h, respectively. The solution was extracted with EtOAc (4 × 4 mL). The aqueous phase was concentrated under reduced pressure to afford a residue, which was purified by silica gel open column chromatography eluting with CH3CN-H2O (8:1) to afford a sugar mixture of 1.36 mg (from 1) and 1.09 mg (from 3), respectively. The two sugar mixtures exhibited identical 1H NMR spectra compared to an authentic mixture of L-arabinose and D-glucose (Figure S27, Supporting Information). The four theoretical possibilities of sugar combinations and their corresponding specific rotation values are as follows: l-ara/d-glc (+155.7), d-ara/l-glc (−155.7), d-ara/d-glc (−50.3), and l-ara/l-glc (50.3). The [α]D20 values (+138.3 c 0.091, H2O and +160.5 c 0.073, H2O) observed in the present study are consistent with that of the authentic mixture of l-arabinose and d-glucose in a 1:1 ratio (+155.4 c 0.241, H2O).

Supplementary Material

Supporting Information

ACKNOWLEDGMENT

This study was supported by grants P50AT000155 and U41AT008706 from the Office of Dietary Supplements (ODS) and the National Center for Complementary and Integrative Health (NCCIH) of the NIH. The authors wish to thank the Alaska Rhodiola growers, especially. Dr. Petra Illig of AK Roseroot, as well as the Anchor Point Nursery, for their commitment to sustainability of Rhodiola plant resources and support of our collection trips.

Footnotes

Supporting Information

NMR data for compounds 14 (1H, 13C, COSY, HSQC, HMBC, and NOESY). This material is available free of charge via the Internet at http://pubs.acs.org. The original NMR data (FIDs) of the spectra in the figures and tables are made available at DOI: https://doi.org/10.7910/DVN/Y0DH49.

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