Skip to main content
Computational Intelligence and Neuroscience logoLink to Computational Intelligence and Neuroscience
. 2020 Aug 7;2020:6524919. doi: 10.1155/2020/6524919

A Complex Chained P System Based on Evolutionary Mechanism for Image Segmentation

Xiyu Liu 1,2,✉, Lin Wang 1,2, Jianhua Qu 1,2, Ning Wang 1,2
PMCID: PMC7428845  PMID: 32831818

Abstract

A new clustering membrane system using a complex chained P system (CCP) based on evolutionary mechanism is designed, developed, implemented, and tested. The purpose of CCP is to solve clustering problems. In CCP, two kinds of evolution rules in different chained membranes are used to enhance the global search ability. The first kind of evolution rules using traditional and modified particle swarm optimization (PSO) clustering techniques are used to evolve the objects. Another based on differential evolution (DE) is introduced to further improve the global search ability. The communication rules are adopted to accelerate the convergence and avoid prematurity. Under the control of evolution-communication mechanism, the CCP can effectively search for the optimal partitioning and improve the clustering performance with the help of the distributed parallel computing model. This proposed CCP is compared with four existing PSO clustering approaches on eight real-life datasets to verify the validity. The computational results on tested images also clearly show the effectiveness of CCP in solving image segmentation problems.

1. Introduction

Membrane computing, also known as membrane systems or P systems, is a novel research of bioinspired computing initiated by Păun [1]. It seeks to discover novel biological computing models from the structure of biological cells as well as the cooperation of cells in tissues, organs, and populations of cells. Over the past years, there are three investigated P systems, cell-like P systems, tissue-like P systems, and neural-like P systems, including spiking neural P systems.

P systems have several characteristics: nondeterminism, programmability, extensibility, and readability [2]. Research shows that the some models of P systems present the same computing power as Turing machines and is more efficient to some extent [3]. Therefore, the analysis of computing power and computational efficiency of P systems is one of the important basic studies [4, 5]. Other studies are focused on the variation of P systems to solve optimization problems, including the variant of rules and structures [6, 7]. In addition, some intelligence techniques, such as evolutionary computation and fuzzy theory, is also introduced to the variant P systems in some specific optimization problems [8].

Because the parallel computation in membrane systems can avoid the increase in time consumption with the increase in the number of data points, the membrane systems are suitable for solving clustering problems [9]. There are a lot of interesting researches in variant P systems to solve clustering problems. Liu and Xue [10] proposed a new cluster splitting technique based on Hopfield networks and P systems. Liu et al. [11] presented an improved Apriori algorithm, named ECTPPT-Apriori, based on evolution-communication tissue-like P system with promoters and inhibitors. Peng et al. [12] developed an extended P system with active membranes, in which a modification differential evolution mechanism is used to find the optimal clustering centers in clustering problems. Peng et al. [13] introduced a multiobjective clustering framework using a tissue-like P system for solve fuzzy clustering problems. Wang et al. [14] proposed a new cell-like P system using a modified genetic algorithm to evolve the objects and using communication rules in the cell-like P system.

Image segmentation is an important part of image processing; it also has critical impact on the final quality of image analysis and subsequent tasks [15]. In the previous studies, the segmentation technique can be divided into region-based methods, edge-based methods, cluster-based methods, and threshold-based methods [16], in which the threshold methods can be classified into bilevel and multilevel threshold methods based on the number of clusters [17]. The region-based methods can obtain high segmentation quality but are sensitive to the parameters. The edge-based methods have high segmentation quality in different regions or targets and are also more sensitive to noise. The cluster-based methods are simple and easily implemented, but the clustering results rely on the number of clusters and feature selection in the colour space. The threshold-based methods are simple to computation, requiring no prior knowledge, but the continuity of the regions is not guaranteed due to the lack of space information [18]. So far, image segmentation has been used with wide recognized significance in machine vision, computer-aided diagnosis of the medical imaging, feature extraction, and analysis [19]. In this paper, the experiment on tested images is simple and easily implemented, and the application of image segmentation is not used in our works, so more details are not described in the following.

Because these segmentation methods mentioned above have their respective advantages and limitations, a lot of works have been done to find robust and optimum segmentation techniques [20]. The threshold technique is one of the most popular segmentation techniques which are based on the gray level of images. It is simplicity and easy implementation, which has lower computational complexity [21]. Li et al. [22] presented a novel thresholding extraction method based on variational mode decomposition (VMD). Zhao et al. [23] introduced a gradient-based adaptive particle swarm optimization (PSO) combined with improved external optimization (EO) to overcome being trapped into local optima in high-dimensional tasks. Wang et al. [24] designed a new P system with related interaction rules; the PSO mechanism is used to maximize entropy threshold. Tan et al. [25] proposed a hybrid clustering models using ensemble deep neural networks for skin lesion segmentation.

P systems are a class of distributed parallel computing models that can be used to improve the global search ability of PSO [26]. The commutation rules of chained P systems can be used to accelerate convergence of PSO. Compared with the crossover and mutation operation of DE, the partitioning information only can be used in the velocity updating of particles [27, 28]. Besides, although the neural networks have high quality for solving the optimization problems, the space and time consumption is too much, and the parallel computing model of P systems is also not executed on the neural networks. Therefore, a new variant of P systems based on PSO mechanism is proposed, which is named complex chained P (CCP) systems. And, the concepts of membrane, objects, and rules based on a special chained structure are introduced in the literature [29]. In this CCP system, two kinds of evolution rules in different chained membranes are introduced to enhance the global search ability. One of evolution rules is using the traditional and modified PSO mechanism to evolve the objects, and the partitioning information is introduced as the environmental factor to improve the clustering performance. Another is based on differential evolution (DE) to evolve the global chained objects in order to enhance the global search ability. Compared with genetic algorithm (GA) [30], the DE is simple and easily implemented, which has less predefined parameters and quick convergence speed. The communication rules for global objects between chained membranes are used to accelerate the convergence speed and avoid prematurity [31, 32]. At last, the CCP system is evaluated on eight benchmark clustering problems and eight tested images with the compared clustering and image segmentation techniques; the experimental results verify the validity and performance of proposed CCP.

The rest of this paper is organized as follows: the framework of the chained P systems is described in Section 2. Section 3 gives more details about the complex chained P system for clustering problems, and the evolution rules and communication rules are described in this section. In order to verify the validity of CCP, some experiments which are conducted on benchmark clustering problems, are taken in Section 4.2. Furthermore, some tested images are used to evaluate the competitive performance of CCP in Section 4.3. Section 5 provides some conclusions and outlines future research directions.

2. Chained P Systems

Some concepts can be briefly defined as follows. A special membrane is called chained membrane, which contains many objects based on a chained structure, and these objects are called chained object. The formal descriptions of the chained P system can be expressed as the following tuple [29].

∏=O,μ,w1,⋯,wm,R1,⋯,Rm,σin,σout, (1)

where

  1. O is a finite nonempty alphabet, and the symbols are called chained objects.

  2. μ is the membrane structure consisting of m membranes, which is composed of two parts: the structure of chained membranes and the structure of the whole chained P system.

  3. w1, ⋯, wm are the initial finite sets of chained objects; wi represents the chained objects in membrane i, for 1 ≤ i ≤ m, wi ∈ O.

  4. R1, ⋯, Rm are the finite sets of chained rules, and Ri represents a finite set of chained rules in membrane i, for 1 ≤ i ≤ m, Ri={Ri1, Ri2, ⋯Rir} which consists of r subrules that are executed on a special order. There are many chained rules on objects, for example, object addition rule, object subtraction rule, object crossover rule, and object variation rule.

  5. σin is the input region or membrane in the chained P systems, which contains the initial objects in the systems.

  6. σout is the output region or membrane in the chained P systems. If a certain chained rule cannot be executed in the chained P system, the computation process will be stopped and the computation results or objects will be transported in the output region or membrane.

3. Proposed Complex Chained P System for Clustering

The proposed chained P system based on evolutionary mechanism with a complex chained structure for clustering problems is presented in this section. First, the general framework of this complex chained P system (CCP) is described, and the basic membrane structure is given. Next, the evolution and communication mechanisms of chained P system are introduced in the CCP system. Finally, the computational process of the CCP system is described in the last parts.

3.1. General Framework of CCP System

The general framework of CCP is similar to that of the chained P systems, but the main differences are the membrane structure of whole P system and the evolution rules for chained objects. In complex chained P system, there are two kinds of chained membranes, chained membranes σ1 to σm and membranes σm+1, which contains different evolution rules. These chained membranes are labelled from 1 to m+1. Respectively, the formal descriptions of the CCP system are as follows :

∏=O,μ,w1,⋯,wm,R1,⋯,Rm,R1′,⋯,Rm+1′,Rm+1∗,σin,σout, (2)

where

  1. O is a finite set of alphabets, which includes all chained objects or strings in the CCP systems.

  2. μ is the membrane structure of CCP system consisting of m+3 membranes.

  3. w1, ⋯, wm are the multisets of the initial chained objects, with wi ∈ O, for 1 ≤ i ≤ m, and wi represents the chained objects.

  4. R1, ⋯, Rm represent finite sets of evolution rules in chained membranes σ1 to σm, Rir,  (1 ≤ i ≤ m) represent a set of evolution subrules in chained membrane i, and the number of the subrules are denoted by r. The subevolution rules are of the form: Rir={u⟶v}, with u, v ∈ O, which means that chained object u will be evolved to chained object v.

  5. R1′, ⋯, Rm+1′ represent the communication rules in chained membranes σ1 to σm+1. The communication rules are of the form: Ri′={u⟶(v, inj)}, with u, v ∈ O, for 1 ≤ i ≤ m+1, which means the chained object u in membrane i will be changed in object v and transported into membrane j.

  6. Rm+1∗ represents finite sets of evolution rules in chained membrane σm+1. For two arbitrary chained objects u and v, u, v ∈ O, there are two kinds of evolution rules existing in the membranes can be executed: crossover rules and variation rules, Rm+1∗={Rm+1,1∗, Rm+1,2∗}.

  7. σin is the input region or membrane in the CCP system, which contains the initial objects of the whole system.

  8. σout is the output region or membrane in the CCP systems. Once the computation is completed, the computation results or objects will be transported to the output region or membranes. Figure 1 gives the membrane structure of the proposed CCP system.

Figure 1.

Figure 1

The membrane structure of CCP system.

In this proposed CCP, the chained objects are considered to be feasible solutions in the search space, and the partition obtained by the clustering technique is represented by C={Ck}, for 1 ≤ k ≤ K. Thus, the i-th chained object ui can be defined as ui=(zi1, zi2, ⋯, ziK), where zk,  (1 ≤ k ≤ K) represents the k-th cluster center, K is the number of the clusters, and the dimension of cluster center is denoted by d. At last, the best chained object that represents the best partitioning results in the system will be output to the σout when the computation is completed.

3.2. Evolution Rules on Chained Objects

There are two kinds of evolution rules on chained objects existing in the chained membranes, the evolution rules in chained membranes σ1 to σm and another evolution rules in chained membrane σm+1.

3.2.1. Evolution Rules in Chained Membranes σ1 to σm

There are two kinds of evolution subrules in chained membranes σ1 to σm, which are based on different velocity updating strategies for chained objects. Firstly, the particle swarm optimization (PSO) mechanism is used to evolve the chained objects, and the traditional velocity model of PSO is introduced to update the velocity of chained object. At t+1 time, the velocity formula of the i-th object ui in j-th chained membrane σj,  (1 ≤ j ≤ m) is determined by (3) in the following equation:

Vit+1=wVit+c1r1uilbestt−uit+c2r2ujgbestt−uit, (3)

where the inertia weight is denoted by w and c1 and c2 represent the learning factor, which is usually restricted to 2. The iteration counter is denoted by t. r1 and r2 are two independent uniform random numbers. The local best of ui in history is denoted by uilbest, specially, the global best in σj is denoted by ujgbest.

Another velocity updating strategy for objects is based on environmental factors. At t+1 time, a modified velocity formula of EPSO is determined by (4) in the following equation:

Vit+1=wVit+c1r1uilbestt−uit+c2r2ujgbestt−uit+c3r3Eit−uit, (4)

where c3 represents a positive constant, r3 is a uniform random number, and Ei(t) represents the environmental factor around to the object ui, which is based on the information of clusters. The partitioning information of cluster is changed dynamically through the evolution of objects, and the geometric center of the data point belonging to the corresponding cluster in the object ui is used as the environment factor, where Ei(t)={ei1(t), ei2(t), ⋯, eiK(t)}, for k=1,2, ⋯, K, which is given by (5) at t time in the following equation:

eikt=∑xp∈CkxpNk, (5)

where eik(t) represents the k-th cluster centroid of the environment factor Ei, xp represents the p-th data point in the dataset, for p=1,2, ⋯, N, N is the number of the data point in the datasets, and number of data points belonging to the corresponding cluster Ck is denoted by Nk.

At t+1 time, the position formula of ui is determined by (6) in the following equation:

uit+1=uit+Vit+1, (6)

and the local best of ui at t+1 time is updated according to (7) in the following equation:

uilbestt+1=uit+1, fuit+1<fuilbestt,uilbestt, otherwise, (7)

where f(u) represents the fitness function of ui for clustering problems, which can be defined by (8) in the following equation:

fui=min∑k=1K∑j=1Nxj−zik. (8)

The purpose of clustering problems is to find a partitioning result C={C1, C2, ⋯, CK} obtained by techniques to minimize the values of fitness function according to equation (8). The global best ujgbest at t+1 time is updated according to (7) in the following equation:

ujgbestt+1=uilbestt+1, fuilbestt+1<fujgbestt,ujgbestt,  otherwise. (9)

At t time, a success rate of chained objects ui is defined by the following equation:

Sui,t=1, if fuilbestt<fuilbestt−1,0, if fuilbestt=fuilbestt−1, (10)

where S(ui, t) represents the success rate of ui. The success rate in the chained membrane σj, for 1 ≤ j ≤ m, is computed by (11) in the following equation:

Pσj,t=∑i=1njsui,tnj, (11)

where nj represents the number of the chained object in chained membrane σj and P(σj, t) is the success rate of σj, P(σj, t) ∈ [0,1], which means the improvement rate at last computation. In this study, a linearly increasing strategy is introduced to adjust the values of the inertia weight dynamically; the possible range is based on the mapping relationship of P(σj, t), which is given by (12) in the following equation:

wt=wmax−wminPσj,t+wmin, (12)

where wminand wmax represent the minimum and maximum of inertia weight and w(t) ∈ [wmin, wmax].

3.2.2. Evolution Rules in Chained Membrane σm+1

The evolution rules in chained membrane σm+1 contain objects crossover rules and object variation rules, differential evolutionary (DE) approach is further used as the variant of evolution rules in σm+1, and the mutation and crossover mechanism is also introduced to help the objects escape the local optima. At t time, the i-th chained object in σm+1 is denoted by ui(t)=(ui1(t), ui2(t), ⋯, ui D(t)), where D=k∗d represents the dimension of the objects and ui′(t) and ui∗(t) are two randomly chained objects in σm+1; the mutation operation is defined by (13) in the following equation:

viyt=uiyt+F1y∗um+1ygbestt−uiyt+F2∗ui′yt−ui∗yt, for y=1,2,⋯,D, (13)

where vi(t) represents the created donor, um+1gbest(t) represents the best object in σm+1, the scaling factor is denoted by F, and the value is given by F1=0.5 × (1+rand(0,1)), F2=0.5 × (1+rand(0,1)). The mutant ui′(t) comes from the created donor through crossover mechanism, which can be defined by

uiy′t=viyt, if randi≤Pc or y=randy,uiyt, otherwise, for y=1,2,⋯,D, (14)

where the crossover rate is denoted by Pc, it is a predefined constant within the range from 0 to 1, randi is an independent uniform random number, and randy is the random dimension from 1 to D. At t+1 time, the position formula of ui is determined by

uit+1=ui′t,fui′t<fvit,uit, otherwise. (15)

3.3. Communication Rules in Chained Membranes

The communication rules of chained P system are used to enhance the cooperation between the chained membranes, which provide good foundation for exchange and sharing of the information. There are two kinds of communication rules in the CCP system:

  1. Rj′={ujgbest(t)⟶(uj(t), inm+1)}, for j=1,2, ⋯, m. At t time, the global best ujgbest in σj is sent to the chained membrane σm+1 and transformed into the j-th object uj. At each iterative computation, the chained membrane σm+1 only contains m objects that come from the chained membranes σ1 to σm.

  2. Rm+1′={um+1gbest(t)⟶(ujgbest(t), inj)}, for j=1,2, ⋯, m. At t time, the global best um+1gbest in σm+1 is transported to the chained membranes σ1 to σm, which is considered to be the global best ujgbest in chained membrane σj. Meanwhile, the global best um+1gbest in membrane σm+1 is sent to the output membrane σout, which is viewed as the best object or the final computation results of the CCP at t time.

3.4. Computation Process of CCP

3.4.1. Initialization

The input membrane σincontains all initial objects in the P system, denoted by Q=m∗n. The position of chained object is randomly initialized in the search space. After initialization, the chained objects in the membrane σin will be transported to the chained membrane σ1 to σm, and each chained membrane contains n objects.

3.4.2. Evolution in Chained Membranes σ1 to σm

The evolution rules on chained objects are used to completed the evolution process according to the equations (3), (4),and (6) in chained membrane σj,  (1 ≤ j ≤ m). And, the selection for velocity formula is based on a random strategy. The local best and global best in σj are updated through the equations (7) and (9).

3.4.3. Communication between Chained Membranes

The first kinds of communication rules are used to transport the global best in the σj,  (1 ≤ j ≤ m) to the chained membrane σm.

3.4.4. Evolution Rules in Chained Membranes σm+1

The evolution rules on chained objects are used to completed the evolution process according to the equations (13) and (14) in chained membrane σm+1, and global best in σm+1 is updated by the equation (15).

3.4.5. Communication between Chained Membranes

The second kinds of communication rules are used to transport the global best in σm to each chained membrane σj,  (1 ≤ j ≤ m).

3.4.6. Halting and Output

The evolution and communication will be implemented repeatedly with an iterative form during the computation process. The termination criterion of the system is stopped to whether the maximum number of iterations or computation is reached. When the system halts, the output membrane σout will send the global best to the environment, and this object is regarded as the final computing results of CCP system.

4. Experimental Analysis of Clustering Problems

In this section, the feasibility and effectiveness of the proposed CCP will be demonstrated through the experimental analysis. The datasets of the experiment are introduced first, and the artificial dataset from the previous studies [33] is used to tune the parameters in CCP. Eight real-life datasets from UCI machine leaning repository [34] is used to compare the performance with currently existing clustering approaches. All clustering approaches, including CCP, are implemented on MATLAB 2016b, and all the experiments are conducted on a DELL desktop computer with an Intel 4.00 GHz i7-8550U processor and 8 GB of RAM in a Windows 10 environment.

4.1. Parameter Setting

The numbers of chained membranes have important influences on the performance of CCP. Therefore, four artificial datasets [33], Data_5_2, Data_9_2, Size5, and Square4, are used to tune this parameter in order to ensure the equity of the experiment. The details of the four artificial datasets are given in Table 1.

Table 1.

Properties of the artificial datasets.

Datasets Data Feature Class
Data_5_2 250 2 5
Data_9_2 900 2 9
Size_5 1000 2 4
Square4 1000 2 4

Different CCP systems with different degrees of m=4, m=5, m=6 [12] are used to evaluate the effects of the number of the chained membranes. The maximum of iterations is set to tmax=100, and the positive constant c3 is a random number which distributed to 0.6 and 3. The lower and upper limits of the inertia weight are set to wmin=0.4 and wmax=1.2. The mutation probability Pc is randomly generated from 0.2 to 0.8. Other parameters which are not tested in this experiment will be maintained the same values for the fairness of the comparison experiments. And, the number of independent running is set to 30 to eliminate the effect of the random factors. The values of mean and SD of the fitness function obtained by CCP system with different degrees are reported in Table 2.

Table 2.

Performance of CCP with different degrees.

Datasets m=4 m=5 m=10
Mean SD Mean SD Mean SD
Data_5_2 326.5071 0.0301 326.4696 0.0123 326.4641 0.0110
Data_9_2 590.8587 0.0624 590.7589 0.0463 590.7413 0.0287
Size_5 2493.1450 4.8048 2491.9680 0.0789 2491.9020 0.0565
Square4 2367.6443 0.0317 2367.6052 0.0260 2367.5917 0.0141

Table 2 reports the clustering results of the CCP system with different degrees on four artificial datasets. The best values of mean and SD for each dataset are given in bold. These results show that the mean and the SD values obtained by the CCP system when m=10 are the best among these different systems.

4.2. Clustering Problems

The performance of the CCP is compared with four clustering approaches that have been reported in the literature to further evaluate the effectiveness, such as standard particle swarm optimization (PSO) [35], differential evolution (DE) [36], environment particle swarm optimization (EPSO) [37], and adaptive particle swarm optimization (APSO) [38]. The comparison experiments are conducted on eight real-life datasets from the UCI machine learning repository, Iris, Newthyroid, Seeds, Diabetes, Yeast, Glass, CMC, and Lung Cancer. More details about these datasets are presented in Table 3.

Table 3.

Properties of the UCI datasets.

Datasets Data Feature Class
Iris 150 4 3
Newthyroid 215 5 3
Seeds 210 7 3
Diabetes 768 8 2
Yeast 1484 8 10
Glass 214 9 6
CMC 1473 9 3
Lung Cancer 32 26 3

In these compared clustering approaches, the crossover probability Pc of the DE approach is randomly generated from 0.2 to 0.8. An environment factor based on the clustering information is embedded in the velocity updating model of EPSO approach, and the learning factor c3 is randomly generated from 0.6 to 3. A nonlinear regressive function of APSO based on the population diversity is used to the adjustment formula of the inertia weight, L represents a predefined constant, and c is a predefined constant. All adjustable parameters in these clustering approaches are set to the appropriate values which are reported in the respective publications from Table 4.

Table 4.

Parameter setting of the comparative clustering approaches used in the experiments.

Parameters PSO DE EPSO APSO CCP
Population (Q) 100 100 100 100 100
t max 200 200 200 200 200
c 1,c2 2,2 N 2,2 N 2,2
c 3 N N (0.6, 3) N (0.6, 3)
r 1,r2 (0,1) N (0, 1) N (0, 1)
r 3 N N (0, 1) N N
(wmin,wmax) 1 N (0.4, 0.6) N (0.4, 1.2)
P c N (0.2, 0.8) N N (0.2, 0.8)
L N N N 2.1 N
c N N N 2 N
m N N N N 10

Each clustering approach, including CCP, ran for 50 times for each dataset to eliminate the effects of random factors. Simple statistics including worst values (Worst), best value (Best), Mean, and SD of fitness function according to (8) are used in the experiments as the evaluation criteria of clustering results. The experimental environment is the same for all comparative clustering approaches.

Figure 2 shows the convergence of these clustering approaches on the eight test datasets for typical runs of these approaches. The fitness value obtained by CCP declines faster at the beginning of the evolution process and then obtains fine convergence for each dataset. The values of the fitness function of PSO and DE decrease slowly at the beginning of the evolution process and do not apparently have better convergence performance than other approaches. Although EPSO and APSO show better performance than the above clustering approaches, they are also easily trapped into local optima, as shown in Figures 2(e), 2(f), and 2(h). Therefore, CCP has better convergence speed and higher clustering quality than the comparative approaches for all these datasets, as shown in Figure 2.

Figure 2.

Figure 2

Convergence of the approaches on each of the eight real-life datasets. (a) Iris, (b) Newthyroid, (c) Seeds, (d) Diabetes, (e) Yeast, (f) Glass, (g) CMC, and (h) Lung Cancer.

Simple statistics of the fitness function values of these clustering approaches on these datasets are reported in Table 5. Results in Table 5 show that CCP has the overall best performance on these eight test datasets. Due to the characteristics of the test datasets, some clustering approaches performed better on some specific datasets with smaller SD, but the performance of CCP on these ten datasets is all considered comparable. Table 6 provides the average computation time in seconds taken by each of the five clustering techniques when running 50 times on each of the datasets. It can be seen from Table 6 that the proposed CCP has a larger average computation time as compared with PSO, DE, EPSO, and APSO. The evolution process in the chained membranes is time-consuming so that CCP takes more time than other techniques does.

Table 5.

Performance of the comparative clustering approaches on the eight real-life datasets.

Datasets Statistics Clustering approaches
PSO DE EPSO APSO CCP
Iris Worst 153.8256 109.9969 96.8183 96.7113 96.6555
Best 114.6361 101.9888 96.7063 96.6672 96.6555
Mean 133.4267 105.2555 96.7431 96.6863 96.6555
S.D. 8.7150 2.3362 0.0374 0.0093 1.23E − 13

Newthyroid Worst 2400.0152 1977.3729 1943.6091 1908.2618 1895.9965
Best 2040.0058 1924.2365 1887.7578 1885.4950 1866.5183
Mean 2271.0529 1950.8237 1903.7699 1897.2114 1888.1277
S.D. 91.1317 14.0217 11.1225 5.0863 7.5021

Seeds Worst 452.8039 353.1875 312.1602 311.9663 311.7978
Best 384.2174 333.9361 311.8824 311.8493 311.7978
Mean 422.1335 342.6432 312.0224 311.9148 311.7978
S.D. 23.0106 5.4078 0.0715 0.0257 4.27E − 07

Diabetes Worst 59885.0835 47911.2714 47629.8621 47590.4655 47561.1362
Best 51628.1083 47693.6403 47585.4012 47561.6124 47561.1262
Mean 54535.4335 47779.1879 47607.6176 47573.1668 47561.1262
S.D. 2147.4319 73.2248 11.8570 6.9363 3.79E − 08

Yeast Worst 430.0923 378.2874 248.9934 287.4479 245.0999
Best 391.0852 348.2327 236.9439 256.7699 235.3785
Mean 407.6461 367.3743 242.7818 271.6039 239.6706
S.D. 10.9776 7.2050 3.3082 8.0848 2.4396

Glass Worst 451.0029 334.2308 226.0186 253.7243 213.4793
Best 328.2842 292.1006 212.6117 210.8631 212.1629
Mean 418.7840 314.2182 216.2731 230.8009 212.9308
S.D. 31.2743 8.9158 3.5290 14.8939 0.3110

CMC Worst 6852.7697 5720.0002 5537.8142 5535.5675 5532.3096
Best 6335.6713 5628.6990 5535.5853 5533.1403 5532.1857
Mean 6551.6558 5683.0978 5536.8242 5534.1784 5532.1913
S.D. 174.0443 28.1480 0.5543 0.5962 0.0278

Lung Cancer Worst 170.2152 153.9227 127.4346 125.6464 125.6485
Best 184.9632 159.9095 138.4711 126.3331 125.6685
Mean 178.8476 157.0802 133.1676 125.7308 125.6609
S.D. 4.1542 1.6051 3.3466 0.1595 0.0052

Table 6.

Average computation time in seconds over 50 runs.

Datasets Clustering approaches
PSO DE EPSO APSO KEPSO-CCP
Iris 2.4630 2.7315 3.0608 2.6708 3.3833
Newthyroid 2.4785 2.8251 3.3350 2.8360 3.6576
Seeds 2.4263 2.7072 3.2817 2.8446 3.5799
Diabetes 2.7341 3.1116 4.9156 3.2315 5.2833
Yeast 5.1674 5.2355 9.8255 5.6831 10.3316
Glass 2.6526 3.0069 3.6378 2.9946 4.0859
CMC 3.7550 4.0391 8.0583 3.9940 8.1726
Lung Cancer 2.3451 2.7382 2.8267 2.7655 3.2006

In order to evaluate the clustering performance of these compared clustering approaches, clustering accuracy (CA) is used to evaluate the quality of clustering results obtained by the clustering techniques; the overall accuracy of partitioning results is defined by

CA=∑k=1Kmaxl=1KCk∩ClN, (16)

where |Ck∩Cl| represents the number of the data points in both belonging to actual cluster k and partitioning cluster l, for k,  l=1,2, ⋯, K. The simple statistics of clustering approaches on eight datasets are reported in Table 7. It can be seen that CCP has overall better performance on these datasets. Although some approaches show a better performance on some specific datasets, the performance of CCP on these specific datasets is also considered compared from Table 7.

Table 7.

Performance of the comparative clustering approaches on the eight real-life datasets.

Datasets Statistics Clustering approaches
PSO DE EPSO APSO CCP
Iris Worst 0.6667 0.8933 0.8933 0.9000 0.8667
Best 0.9267 0.9000 0.9000 0.9000 0.9600
Mean 0.8077 0.8983 0.8997 0.9000 0.9013
SD 0.0904 0.0027 0.0015 1.03E − 17 0.0248

Newthyroid Worst 0.6977 0.7488 0.7721 0.7721 0.7767
Best 0.8372 0.8093 0.8047 0.8047 0.8047
Mean 0.7391 0.7777 0.8000 0.8000 0.8014
SD 0.0337 0.0187 0.0114 0.0114 0.0080

Seeds Worst 0.6476 0.8477 0.8952 0.8952 0.8952
Best 0.8953 0.9143 0.8952 0.8952 0.8953
Mean 0.8367 0.8814 0.8952 0.8952 0.8952
SD 0.0850 0.0207 1.14E − 16 1.14E − 16 1.14E − 16

Diabetes Worst 0.6510 0.6510 0.6510 0.6510 0.6510
Best 0.6510 0.6510 0.6510 0.6510 0.6654
Mean 0.6510 0.6510 0.6510 0.6510 0.6518
SD 1.14E − 16 1.14E – 16 1.14E − 16 1.14E − 16 0.0032

Yeast Worst 0.3120 0.3309 0.4508 0.3942 0.4683
Best 0.3376 0.4016 0.5370 0.4569 0.5418
Mean 0.3171 0.3640 0.4965 0.4377 0.5200
SD 0.0057 0.0248 0.0275 0.0134 0.0152

Glass Worst 0.3551 0.4720 0.5607 0.5093 0.5841
Best 0.4813 0.5234 0.5981 0.5841 0.5841
Mean 0.4140 0.5021 0.5834 0.5486 0.5841
SD 0.0444 0.0144 0.0122 0.0267 1.14E − 16

CMC Worst 0.4332 0.4358 0.4515 0.4562 0.4515
Best 0.4630 0.4582 0.4569 0.4562 0.4569
Mean 0.4510 0.4492 0.4556 0.4562 0.4562
SD 0.0087 0.0074 0.0016 5.66E − 17 0.0012

Lung Cancer Worst 0.4062 0.4063 0.5313 0.4063 0.5625
Best 0.5625 0.5000 0.5625 0.6250 0.5625
Mean 0.4641 0.4281 0.5578 0.5188 0.5625
SD 0.0433 0.0250 0.0114 0.0644 1.28E − 16

4.3. Proposed CCP for Image Segmentation

In this section, some typical experiment and analysis for tested image are proposed to evaluate the segmentation performance of this proposed CCP. These tested images are used in the previous studies and researches, which are provided from the Berkeley segmentation dataset and benchmark [39]. The size of the tested image is 481 × 321; Figure 3 gives the original image of these tested images.

Figure 3.

Figure 3

Benchmark tested images. (a) Church. (b) Train. (c) Roman. (d) Starfish. (e) Surfer II. (f) Cow. (g) Crocodile. (h) Elephant.

OSTU proposed by Qtsu [40] is one of most popular segmentation methods, and it has been used to determine whether the optimal threshold method can give a satisfactory segmentation results. The following discriminant criterion measure of OSTU can be described as follows: An image contains N pixels from 0 to L, usually L is set to 255, need to segmented in M+1 clusters. Thus, M thresholds {t1, t2, ⋯, tM} are needed that divided the original image. The number of i-th gray level pixels or frequencies is denoted by h(i), PRi represents the probability of i-th gray level pixel in the image,PRi=h(i)/N, where N=∑i=0Lh(i). The optimal thresholds {t1, t2, ⋯, tM} are determined by the following equations:

t1∗,t2∗,⋯,tM∗=argmaxσB2t1,t2,⋯,tM, (17)
σB2=∑k=1Mwk∗uk−utk∗2, (18)

where wk2=∑i∈CkPRi, uk2=∑i∈CkiPRi/wk, for k=1,2, ⋯, M.

The compared experiments are performed on the test images with a different number of thresholds, M=3, M=5, and M=8 [41], to evaluate the performance of the CCP in both low- and high-dimensional multilevel thresholding problems. And, the proposed CCP is compared with PSO, DE, EPSO, and APSO approaches as mentation above. The purpose of image segmentation is to find a set of thresholds {t1, t2, ⋯, tM} to maximize the values of Ostu's function according to equation (17). Figures 4–7 give the segmented results on tested images with a different number of thresholds.

Figure 4.

Figure 4

Segmented images of church at different thresholds calculated by all approaches: (a) PSO (Th = 3), (b) DE (Th = 3), (c) EPSO (Th = 3), (d) APSO (Th = 3), (e) CCP (Th = 3), (f) PSO (Th = 5), (g) DE (Th = 5), (h) EPSO (Th = 5), (i) APSO (Th = 5), (j) CCP (Th = 5), (k) PSO (Th = 8), (l) DE (Th = 8), (m) EPSO (Th = 8), (n) APSO (Th = 8), (o) CCP (Th = 8).

Figure 5.

Figure 5

Segmented images of starfish at different thresholds calculated by all approaches: (a) PSO (Th = 3), (b) DE (Th = 3), (c) EPSO (Th = 3), (d) APSO (Th = 3), (e) CCP (Th = 3), (f) PSO (Th = 5), (g) DE (Th = 5), (h) EPSO (Th = 5), (i) APSO (Th = 5), (j) CCP (Th = 5), (k) PSO (Th = 8), (l) DE (Th = 8), (m) EPSO (Th = 8), (n) APSO (Th = 8), (o) CCP (Th = 8).

Figure 6.

Figure 6

Segmented images of Surfer II at different thresholds calculated by all approaches: (a) PSO (Th = 3), (b) DE (Th = 3), (c) EPSO (Th = 3), (d) APSO (Th = 3), (e) CCP (Th = 3), (f) PSO (Th = 5), (g) DE (Th = 5), (h) EPSO (Th = 5), (i) APSO (Th = 5), (j) CCP (Th = 5), (k) PSO (Th = 8), (l) DE (Th = 8), (m) EPSO (Th = 8), (n) APSO (Th = 8), (o) CCP (Th = 8).

Figure 7.

Figure 7

Segmented images of elephant at different thresholds calculated by all approaches: (a) PSO (Th = 3), (b) DE (Th = 3), (c) EPSO (Th = 3), (d) APSO (Th = 3), (e) CCP (Th = 3), (f) PSO (Th = 5), (g) DE (Th = 5), (h) EPSO (Th = 5), (i) APSO (Th = 5), (j) CCP (Th = 5), (k) PSO (Th = 8), (l) DE (Th = 8), (m) EPSO (Th = 8), (n) APSO (Th = 8), (o) CCP (Th = 8).

Figures 4–7 provide the segmented images on church, starfish, surfer II, and elephants obtained by the compared techniques. It can be observed that the segmented quality has been improved with the increasing number of thresholds. And, CCP has a better performance than others on these tested images. Respectively, the segmented images obtained by APSO and CCP achieve better consistency than those by PSO, DE, and EPSO when Th=8. The gray-level histogram is often regarded as a kind of distributions to determine the thresholds for the image segmentation [42]. And, the peak value of the histogram is one of the important factors that affect the segmentation accuracy. Therefore, the thresholds of the compared approaches on church and elephant images are shown in gray-level histogram as follows.

Figures 8 and 9 show the segmented results of church and elephant at 8 thresholds level obtained by CCP and compared approaches. The optimal thresholds values of CCP with {40, 79, 114, 130, 158, 191, 213, 235} is similar to those of the PSO with {40, 77, 114, 130, 157, 190, 213, 235} on church images and also similar to those of the elephant image. From these figures, it can be seen that the optimal thresholds values by DE and EPSO are very different from those by PSO, APSO, and CCP in most cases. Because the segmentation results depend on the information of classes according to the thresholds level, the optimal thresholds of EPSO have statistical difference with others. Furthermore, it is not difficult to find that the selected optimal thresholds heavily depend on the objective function that is chosen. Besides EPSO, other threshold selection approaches, including the CCP approach, can segment the test images more reasonably, as shown in Figures 4–7. Table 8 provides the mean and S of Ostu's function with 3, 5, and 8 thresholds achieved by all compared approaches in 50 run times.

Figure 8.

Figure 8

Segmented images of church at 8 thresholds level calculated by all approaches and their respective gray histogram. (a) Church, (b) PSO, (c) DE, (d) EPSO, (e) APSO, and (f) CCP.

Figure 9.

Figure 9

Segmented images of elephant at 8 thresholds level calculated by all approaches and their respective gray histogram. (a) Elephant, (b) PSO, (c) DE, (d) EPSO, (e) APSO, and (f) CCP.

Table 8.

The values of Ostu's function with a different number of thresholds calculated by all approaches.

Images Th P Segmentation approaches
PSO DE EPSO APSO CCP
Church 3 Mean 3276.8367 3276.837 3276.7685 3276.8367 3276.8367
SD 1.87E − 12 1.87E − 12 0.155831 1.87E − 12 0.00E + 00
5 Mean 3381.9107 3381.4923 3380.4929 3381.9236 3381.9246
SD 0.0171 0.2245 1.1240 0.0046 9.25E − 13
8 Mean 3422.5621 3420.9578 3416.2082 3420.7834 3423.2006
SD 2.6579 0.9181 3.5574 2.86725 1.2323

Train 3 Mean 2606.5951 2606.5951 2606.5623 2606.5951 2606.5951
SD 4.67E − 13 4.67E − 13 0.0500 4.67E − 13 4.67E − 13
5 Mean 2736.2257 2735.3181 2735.2676 2735.6328 2736.2331
SD 0.0135 0.5241 0.6743 2.6787 9.33E − 13
8 Mean 2790.3435 2788.0338 2786.9829 2790.4068 2790.4461
SD 0.0913 0.5724 2.5511 0.0897 0.0389

Roman 3 Mean 2142.3440 2142.3440 2142.2752 2142.3440 2142.3440
SD 9.33E − 13 9.33E − 13 0.1073 9.33E − 13 1.39E − 13
5 Mean 2221.3026 2220.8465 2220.5998 2221.3051 2221.3056
SD 0.0047 0.2476 0.4636 0.0012 1.67E − 13
8 Mean 2251.7218 2250.5766 2249.7117 2251.7258 2251.7325
SD 0.0592 0.4211 1.2147 0.0673 0.0573

Starfish 3 Mean 2784.2272 2784.2272 2784.0795 2784.2272 2784.2272
SD 1.4E − 12 1.4E − 12 0.1267 1.4E − 12 9.25E − 13
5 Mean 2916.2557 2915.6466 2915.5862 2916.2726 2916.2730
SD 0.0240 0.3693 0.6716 0.0010 0.0009
8 Mean 2973.9976 2971.8186 2971.2207 2974.0391 2974.0829
SD 0.0404 0.7603 1.8786 0.0942 0.0151

Surfer II 3 Mean 7953.4181 7953.4181 7953.3489 7953.4181 7953.4181
SD 2.80E − 12 2.80E − 12 0.0718 2.78E − 12 2.80E − 12
5 Mean 8025.5880 8025.1056 8024.6160 8025.6045 8025.6055
SD 0.0147 0.2639 1.2232 0.0031 0.0019
8 Mean 8055.9754 8054.3387 8052.1159 8056.0443 8056.0530
SD 0.0505 0.5497 2.2741 0.0361 0.0189

Cow 3 Mean 3858.2202 3858.2202 3858.1872 3858.2200 3858.2202
SD 0.00E + 00 0.00E + 00 0.0886 0.0009 0.00E + 00
5 Mean 3965.2806 3964.3722 3964.0770 3965.2925 3965.2932
SD 0.0196 0.4531 1.2480 0.0032 4.67E − 13
8 Mean 4028.8447 4026.0490 4024.4213 4028.9299 4028.9450
SD 0.0758 0.8635 2.6447 0.0548 0.0107

Crocodile 3 Mean 3155.4359 3155.4343 3155.3468 3155.4359 3155.4359
SD 9.33E − 13 0.0069 0.0969 9.33E − 13 9.25E − 13
5 Mean 3291.4296 3290.6065 3290.4743 3291.4263 3291.4407
SD 0.0163 0.4943 1.0594 0.0323 0.00E + 00
8 Mean 3348.6314 3346.4809 3345.8010 3348.6425 3348.7305
SD 0.0719 0.6380 2.0889 0.1033 0.0168

Elephants 3 Mean 1626.7205 1626.7205 1626.6710 1626.7198 1626.7205
SD 0.00E + 00 0.00E + 00 0.1220 0.0035 0.00E + 000
5 Mean 1695.8663 1695.5298 1695.2335 1695.8663 1695.8676
SD 0.0039 0.1415 0.8755 0.0023 0.0005
8 Mean 1728.1706 1726.9276 1726.1534 1728.0408 1728.2503
SD 0.0592 0.3931 1.5228 0.6764 0.0232

The simple statistics of compared approaches on tested images are reported in Table 8. The best values of mean and SD for each image are highlighted, and it is not hard to see that the CCP system is able to find the best values. Because the PSO, DE, EPSO, and APSO are not specially techniques for image segmentation, some segmented approaches based on multilevel threshold, whale optimation algorithm (WOA) [43], gray wolf optimizer (GWO) [44], whale optimization algorithm based on thresholding heuristic (WOA-TH) [41], and gray wolf optimizer based on thresholding heuristic (GWO-TH) [41], are used to evaluate the clustering effectiveness of CCP. The maximum number of iterations is set to 2200, 3000, and 3600 with the number of thresholds being 3, 5, and 8. The mean and SD of Ostu's function are obtained by the 100 run times to avoid the effects of random factors.

Table 9 provides the values of mean and SD obtained by different segmented approaches on tested images. Obviously, traditional approaches are easily trapped into local optima, and WOA and GWO have worse segmented performance than that of the others. And, the thresholding heuristic has finetuned the best thresholds to enhance the global search ability of WOA and GWO. It also can be observed that the CCP has better and stable performance than compared segmented approaches on the tested images.

Table 9.

The values of Ostu's function with a different number of thresholds calculated by segmentation approaches.

Images Th P Segmentation approaches
WOA GWO WOA-TH GWO-TH CCP
Church 3 Mean 3271.4427 3271.4383 3271.4427 3271.4445 3276.8367
SD 1.24E – 02 9.93E – 03 9.14 E − 13 8.27E − 05 1.87E − 12
5 Mean 3375.8721 3374.2197 3375.9118 3371.9813 3381.9246
SD 2.65E + 00 6.74E + 00 2.62E + 00 9.65E + 00 9.33E − 13
8 Mean 3416.6815 3415.4415 3417.0876 3415.6558 3423.5841
SD 2.40E + 00 1.74E + 00 1.78E + 00 3.51E + 00 2.72E − 02

Train 3 Mean 2606.5951 2611.4987 2611.5081 2611.5081 2606.5951
SD 2.26E − 02 2.53E − 02 4.57E − 12 4.57E − 12 9.52 E  − 13
5 Mean 2740.6749 2740.5534 2740.6800 2740.6784 2736.2331
SD 1.57E − 02 1.16E − 01 5.77E − 03 6.18E − 03 2.32 E  − 03
8 Mean 2794.6931 2793.9232 2794.7170 2794.2733 2790.4901
SD 5.57E − 02 1.19E + 00 1.90E − 02 5.32E − 01 1.12E − 02

Roman 3 Mean 2138.7893 2138.7837 2138.8057 2138.7992 2142.3440
SD 2.52E − 02 2.62E − 02 0.00E + 00 1.69E − 02 9.33 E  − 13
5 Mean 2218.6635 2218.7936 2218.9622 2218.9687 2221.3056
SD 2.53E + 00 7.93E − 01 1.11E − 02 2.35E − 04 9.25 E  − 13
8 Mean 2249.3768 2248.6408 2249.6457 2249.6080 2251.7798
SD 1.28E + 00 1.17E + 00 1.37E − 01 2.00E − 01 3.77 E  − 02

Starfish 3 Mean 2779.9252 2779.9167 2779.9252 2779.9214 2784.2272
SD 3.20E − 12 6.64E − 03 3.20E − 12 5.91E − 03 1.40 E  − 12
5 Mean 2912.8532 2912.7058 2912.8562 2912.8371 2916.2730
SD 1.18E − 02 1.66E − 01 5.48E − 03 4.62E − 02 9.34E-04
8 Mean 2972.2218 2971.3725 2972.3479 2972.2159 2974.0989
SD 1.21E + 00 1.19E + 00 7.36E − 03 1.99E − 01 2.23E − 03

Surfer II 3 Mean 7953.4167 7953.4063 7953.4167 7953.4135 7953.4181
SD 5.07E − 03 1.89E − 02 4.82E − 03 7.80E − 03 6.48 E  − 12
5 Mean 8025.0703 8025.4959 8025.6049 8025.6025 8025.6055
SD 7.73E − 03 5.56E − 02 7.11E − 03 3.20E − 03 2.80 E  − 12
8 Mean 8055.4215 8054.4135 8056.0617 8055.8463 8056.0646
SD 8.27E − 03 7.36E − 01 2.05E − 03 1.25E − 01 2.01 E  − 03
Cow 3 Mean 3858.2202 3858.2188 3858.2202 3858.2202 3858.2202
SD 5.94E − 12 1.03E − 02 5.94E − 12 5.94E − 12 1.85 E  − 12
5 Mean 3965.2795 3965.1739 3965.2932 3964.6096 3965.2932
SD 2.01E − 02 9.72E − 02 6.40E − 12 2.93E + 00 1.39 E  − 12
8 Mean 4028.9410 4027.7892 4028.8474 4027.7210 4028.9605
SD 1.83E − 02 9.47E − 01 6.11E − 01 1.69E + 00 1.50 E  − 02

Crocodile 3 Mean 3155.4359 3155.4337 3155.4359 3155.4359 3155.4359
SD 9.14E − 13 1.39E − 02 9.14E − 13 9.14 E  − 13 9.33E − 13
5 Mean 3291.4340 3291.2945 3291.4366 3291.4287 3291.4407
SD 1.02E − 02 1.22E − 01 5.38E − 03 1.35E − 02 4.67E − 13
8 Mean 3348.0384 3347.4528 3348.7453 3348.6504 3348.7454
SD 2.79E + 00 1.75E + 00 1.94 E  − 03 7.60E − 02 3.27E − 03

Elephants 3 Mean 1626.7183 1626.7192 1626.7205 1626.7196 1626.7205
SD 3.53E − 03 9.10E − 03 1.37E − 12 9.25E − 03 9.25 E  − 13
5 Mean 1695.0482 1695.3208 1695.8664 1695.8231 1695.8676
SD 3.99E + 00 2.84E + 00 1.05 E  -   03 8.42E − 02 7.12E − 02
8 Mean 1727.1725 1726.5379 1728.2596 1728.1452 1728.2676
SD 2.86E + 00 1.34E + 00 2.55E − 02 1.35E − 01 1.20E − 02

5. Conclusions

A complex chained P system (CCP) is proposed for solving clustering problems, which combines complex chained P systems and evolution mechanisms, including PSO and DE mechanisms. Two kinds of evolution rules for objects in different chained membranes are introduced to enhance the global search ability of PSO. One of evolution rules contain two subevolution rules, which are based on traditional and modified PSO techniques. The partitioning information as environmental factor is introduced to improve the clustering performance of PSO. Another is based on the DE mechanism to evolve the global chained objects in the chained membrane m+1 to enhance the global search ability. In addition, two kinds of communication rules in the chained P systems are defined to enhance the cooperation between chained membranes and avoid prematurity. In order to verify the validity and the performance of CCP, this proposed system is evaluated on eight benchmark clustering problems from the UCI machine learning repository as compared with four developed clustering approaches. Furthermore, eight tested images which from the Berkeley segmentation image databases BSDS300 are used to further evaluate the performance of CCP compared to four existing segmentation techniques. These experimental results verify the validity and performance of this proposed CCP.

P systems, as parallel computing models, are highly effective and efficient in solving optimization problems with linear or polynomial complexity. These parallel computing models based on evolution mechanisms provide new ways for solving clustering problems. The extended clustering chained P system uses the chained P system as the computation structure, and the communication rules between chained membranes are single directional. Although these single directional communication rules are simple and easy to implement, bidirectional communication rules may be introduced in future studies to further accelerate the convergence and improve the diversity of populations. Some more complicated communication structures between different membranes may be used in future studies to improve the performance of the approach. Furthermore, the experiments only used small datasets from the artificial datasets and the UCI Machine Learning Repository, and the proposed approach may have some limitations on high dimensional and large datasets. Future studies may test the effectiveness of CCP using large datasets. Balancing the local and global search abilities is also a hard problem to resolve in the future studies. Future studies may also focus on extended P systems based on tissue-like P systems and other bioinspired computing models. More works are needed to apply these extended membrane systems to solve automatic and multiobjective clustering problems.

Acknowledgments

This research project was partially supported by the National Natural Science Foundation of China (61876101, 61802234, and 61806114), the National Natural Science Foundation of Shandong Province, China (ZR2019QF007), the Ministry of Education Humanities and Social Science Research Youth Foundation, China (19YJCZH244), the Social Science Fund Project of Shandong Province, China (16BGLJ06 and 11CGLJ22), the Special Postdoctoral Project of China (2019T120607), and Postdoctoral Project of China (2017M612339 and 2018M642695).

Data Availability

The two artificial datasets that were manually generated and often used in the existing literature are from the artificial datasets, available at https://www.isical.ac.in/content/databases (accessed June 2018). The eight real-life datasets are often used in the existing literature from the UCI Machine Learning Repository, available at http://archive.ics.uci.edu/ml/datasets.html (accessed June 2018). The eight tested images are from the Berkeley computer vision group, Berkeley segmentation dataset, and benchmark (BSDS300), available at https://www2.eecs.berkeley.edu/Research/Projects/CS/vision/grouping/segbench/(accessed October 2018).

Conflicts of Interest

The authors declare that there are no conflicts of interest regarding the publication of this paper.

References

  • 1.Păun G. H. Membrane computing: an introduction. Theoretical Computer Science. 2002;287(1):73–100. [Google Scholar]
  • 2.Song X., Wang J., Peng H., et al. Spiking neural P systems with multiple channels and anti-spikes. BioSystems. 2018;170:13–19. doi: 10.1016/j.biosystems.2018.05.004. [DOI] [PubMed] [Google Scholar]
  • 3.Leporati A., Manzoni L., Mauri G., et al. The counting power of P systems with antimatter. Theoretical Computer Science. 2017;701(21):161–173. doi: 10.1016/j.tcs.2017.03.045. [DOI] [Google Scholar]
  • 4.Mahmood A. A., Maroosi A., Muniyandi R. C. Membrane computing to enhance time efficiency of minimum dominating set. Mathematics in Computer Science. 2016;10(2):249–261. doi: 10.1007/s11786-016-0261-5. [DOI] [Google Scholar]
  • 5.Leporati A., Manzoni L., Mauri G. Characterising the complexity of tissue P systems with fission rules. Journal of Computer and System Sciences. 2017;90:115–128. doi: 10.1016/j.jcss.2017.06.008. [DOI] [Google Scholar]
  • 6.Pan L. Q., Păun G. H., Son B. Flat maximal parallelism in P systems with promoters. Theoretical Computer Science. 2016;623:83–91. doi: 10.1016/j.tcs.2015.10.027. [DOI] [Google Scholar]
  • 7.Alhazov A., Freund R., Ivanov S. Extended spiking neural P systems with white hole rules and their red-green variants. Natural Computing. 2017;17(2):297–310. doi: 10.1007/s11047-017-9649-7. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 8.Pan T., Shi X., Zhang Z. A small universal spiking neural P system with communication on request. Neurocomputing. 2018;275:1622–1628. doi: 10.1016/j.neucom.2017.10.005. [DOI] [Google Scholar]
  • 9.Wang L., Liu X., Sun M. An Extended clustering membrane system based on particle swarm optimization and cell-like P system with active membranes. Mathematical Problems in Engineering. 2020;2020:18. doi: 10.1155/2020/5097589.5097589 [DOI] [Google Scholar]
  • 10.Liu X. Y., Xue J. A Cluster splitting technique by hopfield networks and P systems on simplices. Neural Processing Letters. 2017;46(1):171–194. doi: 10.1007/s11063-016-9577-z. [DOI] [Google Scholar]
  • 11.Liu X., Zhao Y., Sun M. An improved Apriori algorithm based on an evolution-communication tissue-like P system with promoters and inhibitors. Discrete Dynamics in Nature and Society. 2017;2017(4):1–11. doi: 10.1155/2017/6978146. [DOI] [Google Scholar]
  • 12.Peng H., Wang J., Shi P. An extended membrane system with active membranes to solve automatic fuzzy clustering problems. International Journal of Neural Systems. 2016;26(3) doi: 10.1142/s0129065716500040.1650004 [DOI] [PubMed] [Google Scholar]
  • 13.Peng H., Shi P., Wang J. Multiobjective fuzzy clustering approach based on tissue-like membrane systems. Knowledge-Based Systems. 2017;125:74–82. doi: 10.1016/j.knosys.2017.03.024. [DOI] [Google Scholar]
  • 14.Wang Y. H., Liu X. Y., Xiang L. S. GA-based membrane evolutionary algorithm for ensemble clustering. Computational Intelligence Neuroscience. 2017;2017:11. doi: 10.1155/2017/4367342.4367342 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Maitra M., Amitava C. A hybrid cooperative-comprehensive learning based PSO algorithm for image segmentation using multilevel thresholding. Expert Systems with Applications. 2008;34(2):1341–1350. doi: 10.1016/j.eswa.2007.01.002. [DOI] [Google Scholar]
  • 16.Mur Angel A., Dormido R., Duro N. Expert Systems with Applications. Vol. 65. C: 2016. Determination of the optimal number of clusters using a spectral clustering optimization; pp. 304–314. [DOI] [Google Scholar]
  • 17.Shirly S., Ramesh K. Review on 2D and 3D MRI image segmentation techniques. Current Medical Imaging Formerly Current Medical Imaging Reviews. 2019;15(2):150–160. doi: 10.2174/1573405613666171123160609. [DOI] [PubMed] [Google Scholar]
  • 18.Zhang M., Zhang L., Cheng H. D. A neutrosophic approach to image segmentation based on watershed method. Signal Processing. 2010;90(5):1510–1517. doi: 10.1016/j.sigpro.2009.10.021. [DOI] [Google Scholar]
  • 19.Xuan T. P., Siarry P., Oulhadj H. Integrating fuzzy entropy clustering with an improved PSO for MRI brain image segmentation. Applied Soft Computing. 2018;65:230–242. doi: 10.1016/j.asoc.2018.01.003. [DOI] [Google Scholar]
  • 20.Rahmat R., Harris-Birtill D. B. Comparison of level set models in image segmentation. IET Image Processing. 2018;12(12):2212–2221. doi: 10.1049/iet-ipr.2018.5796. [DOI] [Google Scholar]
  • 21.Pei J. L., Zhao L., Dong X. J. Effective algorithm for determining the number of clusters and its application in image segmentation. Cluster Computing. 2017;20(4):2845–2854. doi: 10.1007/s10586-017-1083-1. [DOI] [Google Scholar]
  • 22.Li J. F., Tang W. Y., Wang J. Multilevel thresholding selection based on variational mode decomposition for image segmentation. Signal Processing. 2018;147:80–91. doi: 10.1016/j.sigpro.2018.01.022. [DOI] [Google Scholar]
  • 23.Zao X. L., Hwang J.-H., Fang Z. J. Gradient-based adaptive particle swarm optimizer with improved extremal optimization. Applied Intelligence. 2018;48(12):4646–4659. doi: 10.1007/s10489-018-1228-9. [DOI] [Google Scholar]
  • 24.Wang B., Chen L. L., Cheng J. New result on maximum entropy threshold image segmentation based on P System. Optik. 2018;163:81–85. doi: 10.1016/j.ijleo.2018.02.062. [DOI] [Google Scholar]
  • 25.Tan T. Y., Zhang L., Lim C. P. Evolving ensemble models for image segmentation using enhanced particle swarm optimization. IEEE Access. 2019;7:34004–34019. doi: 10.1109/access.2019.2903015. [DOI] [Google Scholar]
  • 26.Eberhart R., Shi Y. Particle swarm optimization: developments, applications and resources. Proceedings of the 2001 Congress on Evolutionary Computation; May 2001; Seoul, South Korea, South. pp. 81–86. [Google Scholar]
  • 27.Storn R., Price K. Differential evolution–a simple and efficient heuristic for global optimization over continuous spaces. Journal of Global Optimization. 1997;11(4):341–359. doi: 10.1023/a:1008202821328. [DOI] [Google Scholar]
  • 28.Araújo T. F., Waded U. Performance assessment of PSO, DE and hybrid PSO-DE algorithms when applied to the dispatch of generation and demand. International Journal of Electrical Power & Energy Systems. 2013;47:205–217. doi: 10.1016/j.ijepes.2012.11.002. [DOI] [Google Scholar]
  • 29.Zhao Y. Z., Liu X. Y., Sun W. X. The chained P system with application in graph clustering. Proceedings of the Sixth Asian Conference on Membrane Computing; September 2017; Chengdu, China. pp. 46–57. [Google Scholar]
  • 30.Goldberg D. E. Genetic algorithm in search, optimization and machine learning. 1989.
  • 31.Cao A. H. A passive location algorithm based on differential evolution and genetic algorithm using the Doppler frequency. Signal Processing. 2009;25(10):1644–1648. [Google Scholar]
  • 32.Liao S. H., Chiu C. C., Ho M. H. Comparison of dynamic differential evolution and genetic algorithm for MIMO-WLAN transmitter antenna location in indoor environment. Wireless Personal Communications. 2009;71(4):2677–2691. [Google Scholar]
  • 33. Datasets, http://www.isical.ac.in/content/database.
  • 34.Blake H. C. UCI repository of machine learning databases. 1998.
  • 35.Kennedy J., Eberhart R. Particle swarm optimization. Proceedings of the IEEE International Conference on Neural Networks; November 1995; Perth, Western Australia. pp. 1942–1948. [Google Scholar]
  • 36.Storn R., Kenneth P. Differential evolution–A simple and efficient heuristic for global optimization over continuous spaces. Journal of Global Optimization. 1997;11(4):341–359. doi: 10.1023/a:1008202821328. [DOI] [Google Scholar]
  • 37.Song W., Ma W., Qiao Y. G. Particle swarm optimization algorithm with environmental factors for clustering analysis. Soft Computing. 2017;21(2):283–293. doi: 10.1007/s00500-014-1458-7. [DOI] [Google Scholar]
  • 38.Han H.-G., Lu W., Hou Y. An adaptive-PSO-based self-organizing RBF neural network. IEEE Transactions on Neural Networks and Learning Systems. 2018;29(1):104–117. doi: 10.1109/tnnls.2016.2616413. [DOI] [PubMed] [Google Scholar]
  • 39.The berkeley segmentation dataset and benchmark. https://www2.eecs.berkeley.edu/Research/Projects/CS/vision/grouping/segbench/
  • 40.Qtsu N. A threshold selection method from gray-level histograms. IEEE Transactions on Systems, Man, and Cybernetics. 1979;9(1):62–66. doi: 10.1109/tsmc.1979.4310076. [DOI] [Google Scholar]
  • 41.Kumar B. V., Arya K. V. A new heuristic for multilevel thresholding of images. Expert Systems with Applications. 2019;117:176–203. [Google Scholar]
  • 42.Panda D. P., Rosenfeld A. Image segmentation by pixel classification in (gray level, edge value) space. IEEE Transactions on Computers. 1978;C-27(9):875–879. doi: 10.1109/tc.1978.1675208. [DOI] [Google Scholar]
  • 43.Mirjalili S., Lewis A. The whale optimization algorithm. Advances in Engineering Software. 2016;95:51–67. doi: 10.1016/j.advengsoft.2016.01.008. [DOI] [Google Scholar]
  • 44.Mirjalili S., Seyed M., Lewis A. Grey wolf optimizer. Advances in Engineering Software. 2014;69(3):46–61. doi: 10.1016/j.advengsoft.2013.12.007. [DOI] [Google Scholar]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Data Availability Statement

The two artificial datasets that were manually generated and often used in the existing literature are from the artificial datasets, available at https://www.isical.ac.in/content/databases (accessed June 2018). The eight real-life datasets are often used in the existing literature from the UCI Machine Learning Repository, available at http://archive.ics.uci.edu/ml/datasets.html (accessed June 2018). The eight tested images are from the Berkeley computer vision group, Berkeley segmentation dataset, and benchmark (BSDS300), available at https://www2.eecs.berkeley.edu/Research/Projects/CS/vision/grouping/segbench/(accessed October 2018).


Articles from Computational Intelligence and Neuroscience are provided here courtesy of Wiley

RESOURCES