Abstract
Integration of the tumor microenvironment as a fundamental part of the tumorigenic process has undoubtedly revolutionized our understanding of cancer biology. Increasing evidence indicates that neoplastic cells establish a dependency relationship with normal resident cells in the affected tissue and, furthermore, develop the ability to recruit new accessory cells that aid tumor development. In addition to normal stromal and tumor cells, this tumor ecosystem includes an infiltrated immune component that establishes complex interactions that have a critical effect during the natural history of the tumor. The process by which immune cells modulate tumor progression is known as immunoediting, a dynamic process that creates a selective pressure that finally leads to the generation of immune-resistant cells and the inability of the immune system to eradicate the tumor. In this context, the cellular and functional characterization of the immune compartment within the tumor microenvironment will help to understand tumor progression and, ultimately, will serve to create novel prognostic tools and improve patient stratification for cancer treatment. Here we review the impact of the immune system on tumor development, focusing particularly on its clinical implications and the current technologies used to analyze immune cell diversity within the tumor.
Keywords: tumor microenvironment, immune response, immunomodulation
1. Introduction
Our understanding of the physiological role of immunity in disease and tissue homeostasis goes hand in hand with our ability to explore the molecular complexity associated with the immune response and the intricate communication network between each of its cellular components. Recent advances in the immunology field have illuminated the way to understand diseases wherein the immune system plays a decisive role. Thus, the latest technological developments, such as mass cytometry and single-cell immunogenomics, together with system biology approaches, are enabling the analysis of the cellular composition of the immune compartment with an unprecedented level of resolution, leading to a continuous and dynamic definition of new populations of immune cells. The possibility of correlating a physio-pathological condition with a comprehensive immune signature or profile is providing new and valuable information. Hence, profiling a particular tissue thoroughly both in health and disease will help to uncover the relevant mechanisms regulating these diseases as well as identify new therapeutic targets. Importantly, the tissue-specific microenvironment state is a transversal and integrated concept that could become the starting point for personalized medicine strategies aimed at improving earlier diagnosis, prognosis, stratification, and therapy responses.
There is no doubt that the conceptualization of tumor biology as an isolated nucleus of malignant cells driven by several somatic mutations regulating cell proliferation is oversimplified and obsolete [1]. The integration of the tumor microenvironment (TME) concept, as a fundamental part of the malignization process, has revolutionized the way we study and understand cancer. The results obtained during the last decade demonstrate that neoplastic cells establish a dependency relationship with normal resident cells and, additionally, develop the ability to recruit new accessory cells that aid tumor development [2]. The resulting loss of tissue homeostasis is fundamental for disease progression, uncovering unexplored molecular targets, and providing novel opportunities for cancer treatment.
The TME is a tridimensional network formed by different subtypes of cells that actively interact with each other and with tumor cells. This complex ecosystem includes parenchymal cancer cells, tissue stromal fibroblasts/mesenchymal stromal cells, blood and lymphatic vasculature cells, and cells of immune origin [3]. In addition to the cellular component, the TME also comprises many different molecular and functional elements such as the extracellular matrix, oxygen and nutrient supply, growth factors, cytokines, and interstitial pH. In this framework, the ability of the immune system to recognize the tumor appears as an efficient antitumor strategy, since this immunosurveillance enables the immune system to seek and destroy pretumor cells, thereby preventing the development of cancer and becoming one of the most determining elements during the tumorigenic process. As described in “the three Es of cancer immunoediting” by Dunn, Old, and Schreiber [4], interaction between the immune system and tumor cells results in a dynamic adaptation of both the components and the evasive “stealth” strategy, often referred to as immunoediting, which promotes tumor evasion from immunosurveillance. During this process, tumor cells that are able to escape immune recognition, or those able to induce a tolerogenic response, are finally selected under this immunological pressure and allowed to grow and divide in an uncontrolled manner [5]. Remarkably, the concept of immunoediting was first described in the 1950s by Paul Ehrlich [6]; since then, much effort has been devoted to understanding its complex molecular and cellular networks.
Intrinsically associated with this interplay with the immune system, cancer development is accompanied by a dynamic inflammatory process [7]. Physiological inflammation triggers a series of events aimed at eliminating harmful elements and promoting tissue repair, which involves the controlled action of cells, primarily of immune origin, and soluble molecules (cytokines, chemokines, complement components, etc.). Once the causative agent is removed, a series of mechanisms involving pro-homeostatic and anti-inflammatory signals present in the tissue microenvironment resolve the inflammatory reaction. However, the persistence of the unresolved inflammatory state leads to chronic inflammation, generating an environment prone to the promotion of pretumor cells into active cancer cells. Cancer cells are able to secrete proinflammatory factors (TNFα, IFNγ, IL6, etc.) that enhance the recruitment of immune cells to the inflammation site [8], including polymorphonuclear neutrophils and eosinophils, monocytes, lymphocytes, natural killer cells (NK), and mature dendritic cells. In this inflammatory context, as well as during the early tumor stage, T lymphocytes recognize the “neoantigens” generated by the high mutational load often associated with cancer cells [9,10]. In particular, naive T cells primed in the lymph nodes migrate to the inflamed TME, wherein antigen recognition can lead to the complete removal of the tumor. Release of proinflammatory cytokines (IL2, TNFα, IFNγ, GMCSF) by Th1 lymphocytes initiate the response, triggering NK activation and neoantigen presentation by dendritic cells. Furthermore, Th (helper) 1 CD4+ cytokines can promote the tumoricidal role of CD8+ cytotoxic T lymphocytes by enhancing the production of cytolytic molecules such as perforin and granzyme in these cells, and by increasing their recruitment to the tumor site [11]. As the situation evolves, circulating monocytes infiltrate the tumor site attracted by the chemically altered environment and differentiate to tumor-associated macrophages (TAM), which also play a critical role in cancer development. These cells are highly plastic and, depending on the molecular cues present in the TME, can carry out proinflammatory or anti-inflammatory functions [12]. In a proinflammatory state, TAMs can polarize to M1 Type, and participate actively in the elimination of cancer cells. Further, TAMs can also exacerbate the acute inflammatory response, generating proinflammatory cytokines once activated by dendritic cells.
NK cells target and haunt cancer cells even in the absence of antigen specificity using a large array of stimulatory and inhibitory surface receptors. These receptors can detect aberrant traits in cancer cells, including a partial or complete loss of HLA molecules and the de novo expression of ligands that bind and activate NK cell receptors. For instance, NK stimulatory receptors like NKG2D can cause the release of perforin and granzyme as well as the induction of apoptosis in cancer cells via the release of TNFα and activation of the FAS ligand (FASL) [13]. Finally, a different subset of T cells, natural killer T cells (NKT), are involved in tumor immunosurveillance. NKT cells express an invariant T cell receptor that recognizes lipid antigens presented by a non-classical class I MHC molecule (CD1b), particularly glycerophospholipids. Within NKT cells, type I NKT cells (or invariant NKT cells) is the subtype showing antitumor activity through the secretion upon activation of a large number of cytokines, such as IL4 and IL17, TNFα and IFNγ [14].
To simplify, the lymphocyte response in the tumor is subdivided into two opposite functional poles: a Th1 response, usually associated with active tumor recognition and inflammation; and a Th2 response, characterized by an inhibition of Th1 response and mediated by the release of cytokines such as TGFβ, IL4, IL13, and IL10 by monocytes and TAM. Carcinogenesis causes macrophages to polarize to M2 type [15], while acquiring functions of tissue repair and remodeling of the extracellular matrix, and the ability to release proangiogenic (VEGF) and survival (EGF) factors. Additionally, it has been observed that the production of some cytokines, such as IL10, has an inhibitory effect on dendritic cell maturation, resulting in a lower antigenic presentation to T cells [16]. The result of this process is the generation of a TME prone to cancer development.
Hence, taking into account the complexity at the compositional and functional level of the immune system, it is clear that the mere presence of lymphoid and myeloid cell aggregates in tumors is not indicative of their participation in an antitumor effect, given that these cells may be at different activation states depending on the signals present in the TME. In this regard, it is common for tumor cells to evolve towards an immunogenicity loss and the generation of a TME that minimizes the immune system response. As the inflammation becomes chronic, processes such as matrix remodeling, angiogenesis, and lymphangiogenesis are promoted, eventually facilitating tumor growth, and invasiveness.
In summary, tumor immunity involves a highly dynamic interplay within a large variety of cell types and molecular components, which in turn is also profoundly influenced by germline and somatic genetic variations [17], microbiome (inclusive of viruses, bacteria, fungi, and parasites) [18], environmental and lifestyle (including diet, smoking habits, physical exercise) factors [19]. Although in this review we have focused on the description of the TME at the cellular and molecular level, there is no doubt that the identification of solid biomarkers to help patient stratification and to head towards a more personalized medicine, requires comprehensive and interdisciplinary approaches such as molecular pathological epidemiology (MPE) that transdisciplinary integrates molecular pathology and epidemiology [20]. While this rapidly evolving topic is beyond the scope of this review, readers are referred to a series of comprehensive reviews on this topic [20,21].
For the purpose of this article, the fundamental question is how the immune infiltrate can be studied in order to establish predictive biomarkers of tumor development, and whether this information can be used to improve clinical practice for cancer treatment. Herein we review the current knowledge on the predictive value of immune infiltration in cancer development and on the association of these cells with the response to immunotherapy.
2. Immunological Assessment of the TME for Cancer Prognosis
As discussed above, the immune landscape within the TME is the result of a complex interplay between many immune components, including the presence of chemoattractant factors, immunogenicity associated with the mutational burden of the tumor, alteration of antigen presentation mechanisms, or the action of immunosuppressive mechanisms (anti-inflammatory factors and immune checkpoints). Other extrinsic factors, such as vascularization and tumor location, can be critical aspects that influence the immune status of the tumor as well. In this context, it is clear that there is a causal relationship between the immune response and cancer development and, therefore, analysis of the immune contexture holds enormous clinical potential. In a seminal work, Pagès et al. showed that the immune response within colorectal cancer was associated with prolonged survival [22]. Next, Galon et al. demonstrated the prognostic value of lymphocyte infiltration in colorectal cancer (CRC) based on histopathological analysis [23]. These early initiatives centered on the immunohistochemical evaluation of CD3 and CD8 markers, and resulted in the first systematic classification of CRC based entirely on T cell infiltration [24]. Thus, according to cell density, tumors were classified as “hot” (highly infiltrated and inflamed) or “cold” (very low infiltration and not inflamed) (Figure 1) [25]. Besides, two additional altered states were defined: “excluded” (T cells found only at the invasive margin) and “immunosuppressed” (some infiltration but not inflamed). Tumors within these categories differed in their 2-year risk of relapse, which fostered confidence in the clinical value of these analyses and encouraged the development of a novel prognostic tool in cancer: the Immunoscore. This score is based on a semi-quantitative analysis of the CD8+/CD3+ ratio in both the invasive margin and the center of tumors. In colorectal cancer, it provides a better prognostic value than TNM staging [26,27,28] while its use has expanded to other cancer types, including melanoma, breast, and ovarian cancer [29]. Hence, the Immunoscore has laid the foundation stone for the systematic clinical analysis of the immune compartment present in the TME. There is no doubt that the immune contribution to cancer development is extremely complex, going far beyond what the CD8+/CD3+ ratio reflects. Current efforts should focus on the comprehensive evaluation of the immune status of the TME. In this sense, it is not surprising that, in addition to cytotoxic T cells, many other immune cell populations are also associated with overall survival among cancer patients. These cells, often organized as cellular aggregates called tertiary lymphoid structures (TLS), enable the local generation of tumor-reactive lymphocytes [30]. TLS are usually composed of a follicular zone with CD20+ B cells, surrounded by CD3+ T cell zone with lysosome-associated membrane glycoprotein+-(LAMP+-) dendritic cells. This structured organization permits a local antigen presentation of tumor antigens by dendritic cells as well as the production of effector T cells and antibody-producing plasma cells. Consequently, the presence of TLS is indicative of an active immune response against tumor cells and is, therefore, associated with a more favorable prognosis in most cancer types, including breast, lung, and ovarian cancer [31,32,33]. Surprisingly, TLS are also associated with a negative prognosis in hepatocellular cancer. This unexpected result seems to be related to the ability of cancer cells to generate immunopathological microniches within these structures [34].
In addition to TLS, the presence of some specific immune cell populations has also been connected to cancer prognosis. Macrophages are one of the most abundant and can be found dispersed within the tumor or in association with TLS. Consistent with their critical role in cancer progression, there is a clear correlation between macrophages and cancer prognosis. In general, M1 macrophage density correlates with a good prognosis, as these cells contribute to the development of a proinflammatory microenvironment, while M2 phenotypes would be associated with a poor prognosis. This correlation has been demonstrated in different cancer types such as breast, melanoma, pancreas, prostate, and lung. However, mounting evidence indicates that the specific localization of macrophages within the tumor could be a pivotal factor [35,36,37,38,39].
The prognostic potential of immune-suppressive populations in cancer, particularly the regulatory T cells (Treg) and myeloid-derived suppressor cells (MDSCs), has also been evaluated. Given that they may play a critical role in the modulation of the immune response (immune suppressor effect) against tumor cells, high intratumor density was predicted to be associated with a poor prognosis. In agreement with this prediction, Treg infiltration is a marker of poor prognosis in lung breast cancer [40,41]; however, in colorectal and gastric cancer, it is associated with a good prognosis [42,43,44], although previously Amedei et al. have shown an enrichment of Treg in tumor areas in CRC patients [45]. Moreover, conflicting results have also been reported concerning patient outcomes associated with Treg infiltration, such as head and neck cancers [46,47]. This conflicting results may be related to cell plasticity [48], as several studies have shown unexpected features of this lineage depending on the microenvironment cues [49,50], expressing T cell effector functions such as the production of IL17 and IFNγ and the loss of regulatory properties [51].
Although the causes behind this disparity are not yet clear, these results suggest that the evaluation of Tregs independently of other immunological parameters could be insufficient to develop reliable immunological biomarkers. Meanwhile, MDSCs inhibit T cell proliferation and enhance Treg recruitment and, consistently, their infiltration has also been associated with poor prognosis in several types of cancers [52].
Altogether, these results clearly indicate that different immune components can be directly related to tumor prognosis, but they also highlight the limitations of these histological strategies based on the analyses of a small series of cell surface markers. Hence, a more comprehensive approach should be taken in order to adequately assess the immune TME status and translate it into clinical practice. In recent years, the use of bulk transcriptomic data deconvolution methods, such as CIBERSORT, has enabled the infiltrated immune cell composition within cancer tissues to be explored. Thus, it is possible to obtain a more comprehensive view of the immune landscape using this procedure than histological analysis and, consequently, it could be used to define immune cell signatures with prognostic value [53]. Nonetheless, methods based on bulk analysis of tissue samples are limited by the reference profiles used to identify each cell subset. This fact is a major limitation since the transcriptional programs acquired by the immune cells are highly plastic and dependent on the cellular and molecular components within the tissue microenvironment. Fortunately, new technologies such as single-cell genomics and high dimensional flow cytometry are finally allowing the cellular complexity present within tumors to be captured. These strategies provide a simultaneous assessment of an unprecedented number of cellular parameters, which is essential to define the immune landscape. In breast carcinoma, for instance, single-cell RNA-sequencing revealed that immune cell phenotypic diversity increases within the TME compared to healthy tissue [54]. Moreover, this cellular variety does not fit well into the classical definition of discrete differentiation or polarization states. Meanwhile, T cell and macrophage populations show a variety of differentiation states, which further complicates the characterization of tumor-infiltrating immune cells. This phenotypic heterogeneity has also been observed at the protein level using mass cytometry analysis in breast cancer, demonstrating that immune cells show a wide range of expression levels of receptors associated with immune activation and exhaustion (PD1, CTLA4, HLADR, TIM3, etc.) within the TME [55]. Interestingly, some correlations between tumors and immune cell phenotypes have been detected, such as the association between the frequency of ERα+ tumor cells and the presence of exhaustion markers in TAM and lymphocytes that highlight the importance of a comprehensive analysis including the entire tumor ecosystem. Following a similar strategy, mass cytometry analysis of clear cell renal carcinoma showed broad expression levels of PD1, often in combination with other checkpoint proteins such as TIM3 or CTLA4 [56]. This study also highlights the limitations of the current macrophage polarization model, describing up to fifteen expression clusters in macrophages within the TME, some of which were associated with patient outcomes. In general, it is important to note that although dichotomous polarization models (Th1/Th2, M1/M2, Treg/Th17, etc.) are useful for appraising immune infiltration in cancer, high dimensional characterization of these populations by mass cytometry or single-cell RNA-seq is clearly demonstrating that immune cells are highly plastic and that they do not fit well into these models.
Overall, it is clear that due to the high level of heterogeneity and cell plasticity observed in the TME, translation of these results into clinical practice presents a massive challenge. Nonetheless, some common immune subtypes in cancer have been defined using comprehensive immunogenomic analysis [57], which includes transcriptomic, epigenomic, clinical data, and mutation analysis. Among the described phenotypes, tumors with high CD8+ T cell and M1 infiltration, high intratumor heterogeneity, and neoantigen burden are usually associated with an IFNγ response signature and poor prognosis. Other tumors are associated with a wound healing signature, characterized by an elevated expression of angiogenic genes, a predominance of Th2 phenotypes, and poor prognosis; or otherwise with an inflammatory signature, which is associated with elevated Th17 and Th1 infiltration but bearing a lower neoantigen burden and exhibiting better outcomes. Altogether, these analytical strategies show that systematic approaches aimed at achieving a high-resolution characterization of the immune component are undoubtedly possible, and that some common traits between tumors can be inferred and transferred to clinical practice.
Finally, it is important to note that, while the characterization of tumor infiltration is very informative, the TME is not only restricted to the tumor itself but also involves the surrounding tissues (which are dynamically affected by the pathological process) as documented in pancreatic cancer by TILS (tumor-infiltrating T cells) cloning [58] and in hepatocellular carcinoma (HCC) using single-cell RNA sequencing [59]. By analyzing the immune component in peritumoral hepatic tissue, hepatic lymph nodes, and ascites in the peritoneal cavity. These results show that immune cells in these regions exhibit distinct transcriptional states linked to tumor origin and, therefore, these populations are likely to be functionally associated with cancer development. At any rate, the clinical relevance of the information that can be extracted from the characterization of these cells is still unclear.
3. Evaluation of the Tumor Immune Ecosystem to Refine Current Immunotherapy
Immunotherapy is a therapeutic strategy aimed to enhance the immune response against tumor cells. There are several types of immunotherapies, some of which are well established in clinical practice, while others are currently undergoing clinical trials. Nonetheless, the response rates for immunotherapy are relatively low (10–35%) and often entail inconsistent results [60]. In this context, evaluation of the immune landscape will be critical to understand and predict the success of many of these therapies, including immune checkpoint targeting, T cell transfer therapy, and cancer vaccines.
Immune checkpoints are regulatory mechanisms that prevent exacerbated immune responses and are critically involved in self-tolerance maintenance. Hence, targeting these mechanisms can be used to enhance the expansion and activity of tumor-reactive T cells. Although many checkpoints are suitable targets for cancer immunotherapy, the PD1/PDL1 axis is the most recognized and is already in use for the treatment of both solid (melanoma, non-small cell lung cancer, renal cell carcinoma, etc.) and hematological (Hodgkin’s lymphoma) tumors. This strategy, which has proved very effective in some instances, has some important limitations because previously primed tumor-reactive T cells are required to be successful [61,62]. The fact that CD8+ T cell density at the invasive margin of metastasis and mutational burden in cancer cells predicts the response to PD1 blockade reinforces this observation [63,64]. Consequently, the pre-existing immunological response against the tumor seems to be the most critical element affecting the response rate to checkpoint inhibitors. This raises the question as to how the effectiveness of this strategy can be improved and whether the immunological status can be evaluated to predict response. Indeed, tumors previously classified as hot tumors, are the most likely responders to checkpoint inhibitors. In general, response to checkpoint inhibitors is better if cancer cells express high levels of immunosuppressive molecules [65,66], in the presence of high levels of inflammatory molecules within the TME [67], or when cancer cells show a high mutational burden and high-level microsatellite instability (MSI-high), caused by mismatch repair deficiency [68]. In addition, single-cell analyses have demonstrated that a specific type I interferon-driven signature in Th1 like tumor infiltrated cells responds negatively to checkpoint therapy [69], and therefore, high-resolution techniques may provide novel biomarkers to predict the response to these treatments. Taking into account that checkpoint proteins can be expressed in different levels and combinations in cancer and immune cells, a thorough analysis of the checkpoint landscape may enable the personalization of immunotherapy by targeting specific combinations of these receptors [55,56].
Conversely, cold and immunosuppressed tumors with low immune T cell infiltration and poorly inflamed would, in principle, be unsuitable candidates for immunotherapy and, especially, for immune checkpoint inhibitors, due to the very low T cell response against tumor cells. In these cases, therapies aimed at redirecting the immune response against tumor cells are likely to be more successful. Among the alternatives for these patients, chimeric antigen receptor (CAR) T cell therapy is probably the most promising. This strategy entails the genetic modification of autologous T cells with a chimeric receptor that combines an extracellular domain for recognition of a tumor antigen and the intracellular domain required for T cell activation. After infusion in the patient, CAR T cells will be able to recognize tumor cells and initiate an immune response against them. This method has been quite successful for the treatment of some hematologic malignancies, but these excellent results have not been replicated in solid tumors to date [70]. This is probably due to the immunosuppressive TME, which may prevent activation or trafficking in the tumor site of the T cell. Several combinatorial immune therapies have been proposed to overcome these difficulties, including the use of checkpoint inhibitors in combination with CAR T cells, the addition of co-stimulatory signals to intensify activation, or the coexpression of chemokine receptors to enhance tumor infiltration [71,72,73]. Another promising alternative to treat cold tumors are cancer vaccines, based on the initiation of a T cell response against tumor cells by injecting tumor-specific neoantigens, that trigger antigen-presenting cells (APC) activation and subsequent T cell priming and expansion [25]. This strategy has the potential to convert cold into inflamed tumors, although it has some limitations, such as reduced T cell repertoire in some cancer patients, low immunogenicity of the tumor-specific antigens [74] or the inherent risk of specific loss of heterozygosity affecting APC, by means of HLA haplotype loss [75].
In general, tumors that are poorly infiltrated or have an infiltration profile associated with anti-inflammatory phenotypes, such as M2 and Th2 populations, will greatly benefit from immunotherapies aimed to enhance inflammation within the TME. Thus, targeting anti- or proinflammatory pathways can be an effective approach to induce “hot” phenotypes in these tumors. For instance, targeting TGFβ, a known inducer of Th2 and M2 polarization in cancer, can increase the proinflammatory environment by enhancing NK and CD8+ T cell infiltration and decreasing Treg levels in preclinical models of melanoma [76,77]. Following a similar strategy, antibodies against colony-stimulating factor 1 receptor (CSF1R), the receptor of the pro M2 factor (MCSF), can directly target M2 polarization. Combined with the PDL1 blockade, this method is currently being tested to treat advanced solid malignancies [78]. The immunotherapy response can also be improved by directly stimulating proinflammatory pathways, such as those associated with Toll-like receptors (TLRs) and proinflammatory cytokines. This has been tested with a TLR signaling agonist that proved effective in cancer mouse models and is now undergoing clinical trials [79].
In addition to T cell recognition of tumor cells, T cell trafficking is another important aspect when factoring in the efficiency of immunotherapies in solid tumors. Improving T cell recruitment could enhance the efficiency of CAR T cell therapy. Furthermore, it could be critical for the treatment of tumors that are poorly infiltrated or have an “excluded” immune phenotype (i.e., T cells are in the invasive margin of the tumor but are unable to infiltrate it). Interestingly, treatment with IL12 greatly enhances NK and B cell infiltration in head and neck squamous cell carcinoma patients [80], while in mouse models, the use of the oncolytic virus expressing the chemokine CCL5 improves CAR T cell infiltration [81]. Meanwhile, CXCL9 and CXCL10 (CXCL11 in humans) are key chemokines in the recruitment of CD8+ T cells, which are frequently silenced in “non-inflamed” tumors by abnormal DNA hypermethylation in their genetic loci. In these tumors, the use of demethylating agents can restore chemokine production, enhancing T cell recruitment to the tumor site [82]. Finally, anti-angiogenic drugs normalize tumor vasculature and induce the upregulation of the leukocyte adhesion molecules ICAM1 and VCAM1 on tumor endothelial cells, leading to increased T cell infiltration [83].
4. Conclusions
Overall, it is clear that assessment of the immune status in cancer is critical to predicting the immunotherapy response and, therefore, some systematic approaches to characterize tumors at the immunological level have been proposed [84]. This is the case of the cancer immunogram, which aims to classify tumors according to immune parameters previously associated with the response to immunotherapy, including mutational load, lymphocyte infiltration, absence of checkpoints or soluble inhibitors, response to immune effectors such as IFNγ, and tumor metabolism. These and other parameters not initially included, such as macrophage and Th polarization or specific gene signatures, would provide an overview of interactions between the immune system and cancer cells that may help guide treatment choice for more personalized immunotherapy. Furthermore, novel technologies such as single-cell transcriptomics/epigenomics and high dimensional flow cytometry are rapidly expanding our ability to explore these interactions, enabling the generation of novel biomarkers associated with cancer development and therapy response. Undoubtedly, incorporation of these biomarkers in future clinical trials will provide essential information that will pave the way for more refined and personalized immunotherapy.
Abbreviations
APC | antigen-presenting cells |
CAR | chimeric antigen receptor |
CCL | C-C motif chemokine ligand |
CD | cluster of differentiation |
CRC | colorectal cancer |
CSF1R | colony-stimulating factor 1 receptor |
CTLA4 | cytotoxic T-lymphocyte-associated protein 4 |
CXCL | C-X-C motif chemokine ligand |
DC | dendritic cells |
DNA | deoxyribonucleic acid |
EGF | epidermal growth factor |
Erα | estrogen receptor alpha |
FASL | FAS ligand |
GMCSF | granulocyte macrophage colony-stimulating factor |
HCC | hepatocellular carcinoma |
HLA | human leukocyte antigen |
HLADR | human leukocyte antigen DR- isotype |
ICAM | intracellular cell adhesion molecule |
IFNγ | interferon gamma |
IL | interleukin |
KLRK1 | killer cell lectin-like receptor K1 |
LAMP | lysosome-associated membrane glycoprotein |
MCSF | macrophage colony-stimulating factor |
MDSC | myeloid-derived suppressor cells |
MHC | major histocompatibility complex |
MPE: | molecular pathological epidemiology |
MSI | microsatellite instability |
NK | natural killer cell |
NKT | natural killer T cell |
PD1 | programmed cell death protein 1 |
PDL1 | programmed cell death ligand 1 |
RNA | ribonucleic acid |
TAM | tumor-associated macrophages |
TGFβ | transforming growth factor-beta |
Th | T helper cell |
TIM3 | T cell immunoglobulin-mucin domain 3 |
TLR | Toll-like receptor |
TLS | tertiary lymphoid structures |
TME | tumor microenvironment |
TNFα | tumor necrosis factor-alpha |
Treg | regulatory T cell |
VCAM | vascular cell adhesion molecule |
VEGF | vascular endothelial growth factor |
Author Contributions
Writing—original draft preparation, K.P.-R., R.M.R., A.A., G.B.-C., D.H.L.; writing—review and editing, K.P.-R., R.M.R., A.A., G.B.-C., D.H.L.; visualization, G.B.-C., D.H.L.; supervision, G.B.-C., D.H.L.; project administration, funding acquisition, G.B.-C., D.H.L. All authors have read and agreed to the published version of the manuscript.
Funding
This research was funded by the Institute of Health Carlos III, grant number PI19/00002 and PI19/00184, the Spanish Association Against Cancer (AECC-Junta de Baleares), grant number AECC02-2017, and the Direcció General de Innovació i Recerca (Government of the Balearic Islands), grant number AAEE021/2017 and cofounded by ERDF (European Regional Development Fund). RMR contract is supported by the MINECO (Juan de la Cierva-Incorporaciόn, grant number IJCI-2017-33347), and the DHL contract is supported by the Institute of Health Carlos III (GIS19/00018) and cofunded by ESF (European Social Fund).
Conflicts of Interest
The authors declare no conflict of interest.
References
- 1.Hanahan D., Weinberg R.A. Hallmarks of Cancer: The Next Generation. Cell. 2011;144:646–674. doi: 10.1016/j.cell.2011.02.013. [DOI] [PubMed] [Google Scholar]
- 2.Hanahan D., Coussens L.M. Accessories to the Crime: Functions of Cells Recruited to the Tumor Microenvironment. Cancer Cell. 2012;21:309–322. doi: 10.1016/j.ccr.2012.02.022. [DOI] [PubMed] [Google Scholar]
- 3.Balkwill F.R., Capasso M., Hagemann T. The tumor microenvironment at a glance. J. Cell Sci. 2012;125:5591–5596. doi: 10.1242/jcs.116392. [DOI] [PubMed] [Google Scholar]
- 4.Dunn G.P., Old L.J., Schreiber R.D. The Three Es of Cancer Immunoediting. Annu. Rev. Immunol. 2004;22:329–360. doi: 10.1146/annurev.immunol.22.012703.104803. [DOI] [PubMed] [Google Scholar]
- 5.Teng M.W.L., Galon J., Fridman W.-H., Smyth M.J. From mice to humans: Developments in cancer immunoediting. J. Clin. Invest. 2015;125:3338–3346. doi: 10.1172/JCI80004. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6.RHOADS C.P. Paul ehrlich and the cancer problem. Ann. N. Y. Acad. Sci. 1954;59:190–197. doi: 10.1111/j.1749-6632.1954.tb45931.x. [DOI] [PubMed] [Google Scholar]
- 7.Crusz S.M., Balkwill F.R. Inflammation and cancer: Advances and new agents. Nat. Rev. Clin. Oncol. 2015;12:584–596. doi: 10.1038/nrclinonc.2015.105. [DOI] [PubMed] [Google Scholar]
- 8.Balkwill F. Tumour necrosis factor and cancer. Nat. Rev. Cancer. 2009;9:361–371. doi: 10.1038/nrc2628. [DOI] [PubMed] [Google Scholar]
- 9.Alspach E., Lussier D.M., Miceli A.P., Kizhvatov I., DuPage M., Luoma A.M., Meng W., Lichti C.F., Esaulova E., Vomund A.N., et al. MHC-II neoantigens shape tumour immunity and response to immunotherapy. Nature. 2019;574:696–701. doi: 10.1038/s41586-019-1671-8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10.Linette G.P., Becker-Hapak M., Skidmore Z.L., Baroja M.L., Xu C., Hundal J., Spencer D.H., Fu W., Cummins C., Robnett M., et al. Immunological ignorance is an enabling feature of the oligo-clonal T cell response to melanoma neoantigens. Proc. Natl. Acad. Sci. USA. 2019;116:23662–23670. doi: 10.1073/pnas.1906026116. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Gonzalez H., Hagerling C., Werb Z. Roles of the immune system in cancer: From tumor initiation to metastatic progression. Genes Dev. 2018;32:1267–1284. doi: 10.1101/gad.314617.118. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Yang L., Zhang Y. Tumor-associated macrophages: From basic research to clinical application. J. Hematol. Oncol. 2017;10:58. doi: 10.1186/s13045-017-0430-2. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 13.Marcus A., Gowen B.G., Thompson T.W., Iannello A., Ardolino M., Deng W., Wang L., Shifrin N., Raulet D.H. Recognition of Tumors by the Innate Immune System and Natural Killer Cells. Adv. Immunol. 2014;122:91–128. doi: 10.1016/B978-0-12-800267-4.00003-1. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 14.Tiwary S., Berzofsky J.A., Terabe M. Altered Lipid Tumor Environment and Its Potential Effects on NKT Cell Function in Tumor Immunity. Front. Immunol. 2019:10. doi: 10.3389/fimmu.2019.02187. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 15.Mantovani A., Marchesi F., Malesci A., Laghi L., Allavena P. Tumour-associated macrophages as treatment targets in oncology. Nat. Rev. Clin. Oncol. 2017;14:399–416. doi: 10.1038/nrclinonc.2016.217. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Ruffell B., Chang-Strachan D., Chan V., Rosenbusch A., Ho C.M.T., Pryer N., Daniel D., Hwang E.S., Rugo H.S., Coussens L.M. Macrophage IL-10 Blocks CD8+ T Cell-Dependent Responses to Chemotherapy by Suppressing IL-12 Expression in Intratumoral Dendritic Cells. Cancer Cell. 2014;26:623–637. doi: 10.1016/j.ccell.2014.09.006. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17.Le D.T., Durham J.N., Smith K.N., Wang H., Bartlett B.R., Aulakh L.K., Lu S., Kemberling H., Wilt C., Luber B.S., et al. Mismatch repair deficiency predicts response of solid tumors to PD-1 blockade. Science. 2017;357:409–413. doi: 10.1126/science.aan6733. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 18.Hamada T., Nowak J.A., Milner D.A., Song M., Ogino S. Integration of microbiology, molecular pathology, and epidemiology: A new paradigm to explore the pathogenesis of microbiome-driven neoplasms. J. Pathol. 2019;247:615–628. doi: 10.1002/path.5236. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 19.Koh H., Hamada T., Song M., Liu L., Cao Y., Nowak J.A., da Silva A., Twombly T., Morikawa T., Kim S.A., et al. Physical Activity and Colorectal Cancer Prognosis According to Tumor-Infiltrating T Cells. JNCI Cancer Spectr. 2018;2:pky058. doi: 10.1093/jncics/pky058. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 20.Ogino S., Nowak J.A., Hamada T., Milner D.A., Nishihara R. Insights into Pathogenic Interactions Among Environment, Host, and Tumor at the Crossroads of Molecular Pathology and Epidemiology. Annu. Rev. Pathol. Mech. Dis. 2019;14:83–103. doi: 10.1146/annurev-pathmechdis-012418-012818. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21.Ogino S., Nowak J.A., Hamada T., Phipps A.I., Peters U., Milner D.A., Giovannucci E.L., Nishihara R., Giannakis M., Garrett W.S., et al. Integrative analysis of exogenous, endogenous, tumour and immune factors for precision medicine. Gut. 2018;67:1168–1180. doi: 10.1136/gutjnl-2017-315537. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22.Pagès F., Berger A., Camus M., Sanchez-Cabo F., Costes A., Molidor R., Mlecnik B., Kirilovsky A., Nilsson M., Damotte D., et al. Effector Memory T Cells, Early Metastasis, and Survival in Colorectal Cancer. N. Engl. J. Med. 2005;353:2654–2666. doi: 10.1056/NEJMoa051424. [DOI] [PubMed] [Google Scholar]
- 23.Galon J. Type, Density, and Location of Immune Cells Within Human Colorectal Tumors Predict Clinical Outcome. Science. 2006;313:1960–1964. doi: 10.1126/science.1129139. [DOI] [PubMed] [Google Scholar]
- 24.Camus M., Tosolini M., Mlecnik B., Pages F., Kirilovsky A., Berger A., Costes A., Bindea G., Charoentong P., Bruneval P., et al. Coordination of Intratumoral Immune Reaction and Human Colorectal Cancer Recurrence. Cancer Res. 2009;69:2685–2693. doi: 10.1158/0008-5472.CAN-08-2654. [DOI] [PubMed] [Google Scholar]
- 25.Galon J., Bruni D. Approaches to treat immune hot, altered and cold tumours with combination immunotherapies. Nat. Rev. Drug Discov. 2019;18:197–218. doi: 10.1038/s41573-018-0007-y. [DOI] [PubMed] [Google Scholar]
- 26.Pagès F., Kirilovsky A., Mlecnik B., Asslaber M., Tosolini M., Bindea G., Lagorce C., Wind P., Marliot F., Bruneval P., et al. In Situ Cytotoxic and Memory T Cells Predict Outcome in Patients With Early-Stage Colorectal Cancer. J. Clin. Oncol. 2009;27:5944–5951. doi: 10.1200/JCO.2008.19.6147. [DOI] [PubMed] [Google Scholar]
- 27.Mlecnik B., Bindea G., Angell H.K., Maby P., Angelova M., Tougeron D., Church S.E., Lafontaine L., Fischer M., Fredriksen T., et al. Integrative Analyses of Colorectal Cancer Show Immunoscore Is a Stronger Predictor of Patient Survival Than Microsatellite Instability. Immunity. 2016;44:698–711. doi: 10.1016/j.immuni.2016.02.025. [DOI] [PubMed] [Google Scholar]
- 28.Mlecnik B., Tosolini M., Kirilovsky A., Berger A., Bindea G., Meatchi T., Bruneval P., Trajanoski Z., Fridman W.-H., Pagès F., et al. Histopathologic-Based Prognostic Factors of Colorectal Cancers Are Associated With the State of the Local Immune Reaction. J. Clin. Oncol. 2011;29:610–618. doi: 10.1200/JCO.2010.30.5425. [DOI] [PubMed] [Google Scholar]
- 29.Fridman W.H., Zitvogel L., Sautès–Fridman C., Kroemer G. The immune contexture in cancer prognosis and treatment. Nat. Rev. Clin. Oncol. 2017;14:717–734. doi: 10.1038/nrclinonc.2017.101. [DOI] [PubMed] [Google Scholar]
- 30.Pitzalis C., Jones G.W., Bombardieri M., Jones S.A. Ectopic lymphoid-like structures in infection, cancer and autoimmunity. Nat. Rev. Immunol. 2014;14:447–462. doi: 10.1038/nri3700. [DOI] [PubMed] [Google Scholar]
- 31.Martinet L., Garrido I., Filleron T., Le Guellec S., Bellard E., Fournie J.-J., Rochaix P., Girard J.-P. Human Solid Tumors Contain High Endothelial Venules: Association with T- and B-Lymphocyte Infiltration and Favorable Prognosis in Breast Cancer. Cancer Res. 2011;71:5678–5687. doi: 10.1158/0008-5472.CAN-11-0431. [DOI] [PubMed] [Google Scholar]
- 32.Germain C., Gnjatic S., Tamzalit F., Knockaert S., Remark R., Goc J., Lepelley A., Becht E., Katsahian S., Bizouard G., et al. Presence of B Cells in Tertiary Lymphoid Structures Is Associated with a Protective Immunity in Patients with Lung Cancer. Am. J. Respir. Crit. Care Med. 2014;189:832–844. doi: 10.1164/rccm.201309-1611OC. [DOI] [PubMed] [Google Scholar]
- 33.Kroeger D.R., Milne K., Nelson B.H. Tumor-Infiltrating Plasma Cells Are Associated with Tertiary Lymphoid Structures, Cytolytic T-Cell Responses, and Superior Prognosis in Ovarian Cancer. Clin. Cancer Res. 2016;22:3005–3015. doi: 10.1158/1078-0432.CCR-15-2762. [DOI] [PubMed] [Google Scholar]
- 34.Finkin S., Yuan D., Stein I., Taniguchi K., Weber A., Unger K., Browning J.L., Goossens N., Nakagawa S., Gunasekaran G., et al. Ectopic lymphoid structures function as microniches for tumor progenitor cells in hepatocellular carcinoma. Nat. Immunol. 2015;16:1235–1244. doi: 10.1038/ni.3290. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35.Medrek C., Pontén F., Jirström K., Leandersson K. The presence of tumor associated macrophages in tumor stroma as a prognostic marker for breast cancer patients. BMC Cancer. 2012;12:306. doi: 10.1186/1471-2407-12-306. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 36.Jensen T.O., Schmidt H., Møller H.J., Høyer M., Maniecki M.B., Sjoegren P., Christensen I.J., Steiniche T. Macrophage Markers in Serum and Tumor Have Prognostic Impact in American Joint Committee on Cancer Stage I/II Melanoma. J. Clin. Oncol. 2009;27:3330–3337. doi: 10.1200/JCO.2008.19.9919. [DOI] [PubMed] [Google Scholar]
- 37.Hou Y.-C., Chao Y.-J., Tung H.-L., Wang H.-C., Shan Y.-S. Coexpression of CD44-positive/CD133-positive cancer stem cells and CD204-positive tumor-associated macrophages is a predictor of survival in pancreatic ductal adenocarcinoma. Cancer. 2014;120:2766–2777. doi: 10.1002/cncr.28774. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 38.Comito G., Giannoni E., Segura C.P., Barcellos-de-Souza P., Raspollini M.R., Baroni G., Lanciotti M., Serni S., Chiarugi P. Cancer-associated fibroblasts and M2-polarized macrophages synergize during prostate carcinoma progression. Oncogene. 2014;33:2423–2431. doi: 10.1038/onc.2013.191. [DOI] [PubMed] [Google Scholar]
- 39.Hirayama S., Ishii G., Nagai K., Ono S., Kojima M., Yamauchi C., Aokage K., Hishida T., Yoshida J., Suzuki K., et al. Prognostic Impact of CD204-Positive Macrophages in Lung Squamous Cell Carcinoma: Possible Contribution of Cd204-Positive Macrophages to the Tumor-Promoting Microenvironment. J. Thorac. Oncol. 2012;7:1790–1797. doi: 10.1097/JTO.0b013e3182745968. [DOI] [PubMed] [Google Scholar]
- 40.Shimizu K., Nakata M., Hirami Y., Yukawa T., Maeda A., Tanemoto K. Tumor-Infiltrating Foxp3+ Regulatory T Cells are Correlated with Cyclooxygenase-2 Expression and are Associated with Recurrence in Resected Non-small Cell Lung Cancer. J. Thorac. Oncol. 2010;5:585–590. doi: 10.1097/JTO.0b013e3181d60fd7. [DOI] [PubMed] [Google Scholar]
- 41.Bates G.J., Fox S.B., Han C., Leek R.D., Garcia J.F., Harris A.L., Banham A.H. Quantification of Regulatory T Cells Enables the Identification of High-Risk Breast Cancer Patients and Those at Risk of Late Relapse. J. Clin. Oncol. 2006;24:5373–5380. doi: 10.1200/JCO.2006.05.9584. [DOI] [PubMed] [Google Scholar]
- 42.Ling A., Edin S., Wikberg M.L., Öberg Å., Palmqvist R. The intratumoural subsite and relation of CD8+ and FOXP3+ T lymphocytes in colorectal cancer provide important prognostic clues. Br. J. Cancer. 2014;110:2551–2559. doi: 10.1038/bjc.2014.161. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 43.Salama P., Phillips M., Grieu F., Morris M., Zeps N., Joseph D., Platell C., Iacopetta B. Tumor-Infiltrating FOXP3 + T Regulatory Cells Show Strong Prognostic Significance in Colorectal Cancer. J. Clin. Oncol. 2009;27:186–192. doi: 10.1200/JCO.2008.18.7229. [DOI] [PubMed] [Google Scholar]
- 44.Kim K.-J., Lee K.S., Cho H.J., Kim Y.H., Yang H.K., Kim W.H., Kang G.H. Prognostic implications of tumor-infiltrating FoxP3+ regulatory T cells and CD8+ cytotoxic T cells in microsatellite-unstable gastric cancers. Hum. Pathol. 2014;45:285–293. doi: 10.1016/j.humpath.2013.09.004. [DOI] [PubMed] [Google Scholar]
- 45.Niccolai E., Ricci F., Russo E., Nannini G., Emmi G., Taddei A., Ringressi M.N., Melli F., Miloeva M., Cianchi F., et al. The Different Functional Distribution of “Not Effector” T Cells (Treg/Tnull) in Colorectal Cancer. Front. Immunol. 2017:8. doi: 10.3389/fimmu.2017.01900. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 46.Badoual C. Prognostic Value of Tumor-Infiltrating CD4+ T-Cell Subpopulations in Head and Neck Cancers. Clin. Cancer Res. 2006;12:465–472. doi: 10.1158/1078-0432.CCR-05-1886. [DOI] [PubMed] [Google Scholar]
- 47.Sun D., Zhao M., Xia M., Li L., Jiang Y. The correlation between tumor-infiltrating Foxp3+ regulatory T cells and cyclooxygenase-2 expression and their association with recurrence in resected head and neck cancers. Med. Oncol. 2012;29:707–713. doi: 10.1007/s12032-011-9903-2. [DOI] [PubMed] [Google Scholar]
- 48.Kitz A., Dominguez-Villar M. Molecular mechanisms underlying Th1-like Treg generation and function. Cell. Mol. Life Sci. 2017;74:4059–4075. doi: 10.1007/s00018-017-2569-y. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 49.Sawant D.V., Vignali D.A.A. Once a Treg, always a Treg? Immunol. Rev. 2014;259:173–191. doi: 10.1111/imr.12173. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 50.Bhela S., Varanasi S.K., Jaggi U., Sloan S.S., Rajasagi N.K., Rouse B.T. The Plasticity and Stability of Regulatory T Cells during Viral-Induced Inflammatory Lesions. J. Immunol. 2017;199:1342–1352. doi: 10.4049/jimmunol.1700520. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 51.Voo K.S., Wang Y.H., Santori F.R., Boggiano C., Wang Y.H., Arima K., Bover L., Hanabuchi S., Khalili J., Marinova E., et al. Identification of IL-17-producing FOXP3 + regulatory T cells in humans. Proc. Natl. Acad. Sci. USA. 2009;12:4793–4798. doi: 10.1073/pnas.0900408106. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 52.Ai L., Mu S., Wang Y., Wang H., Cai L., Li W., Hu Y. Prognostic role of myeloid-derived suppressor cells in cancers: A systematic review and meta-analysis. BMC Cancer. 2018;18:1220. doi: 10.1186/s12885-018-5086-y. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 53.Newman A.M., Liu C.L., Green M.R., Gentles A.J., Feng W., Xu Y., Hoang C.D., Diehn M., Alizadeh A.A. Robust enumeration of cell subsets from tissue expression profiles. Nat. Methods. 2015;12:453–457. doi: 10.1038/nmeth.3337. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 54.Azizi E., Carr A.J., Plitas G., Cornish A.E., Konopacki C., Prabhakaran S., Nainys J., Wu K., Kiseliovas V., Setty M., et al. Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment. Cell. 2018;174:1293–1308.e36. doi: 10.1016/j.cell.2018.05.060. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 55.Wagner J., Rapsomaniki M.A., Chevrier S., Anzeneder T., Langwieder C., Dykgers A., Rees M., Ramaswamy A., Muenst S., Soysal S.D., et al. A Single-Cell Atlas of the Tumor and Immune Ecosystem of Human Breast Cancer. Cell. 2019;177:1330–1345.e18. doi: 10.1016/j.cell.2019.03.005. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 56.Chevrier S., Levine J.H., Zanotelli V.R.T., Silina K., Schulz D., Bacac M., Ries C.H., Ailles L., Jewett M.A.S., Moch H., et al. An Immune Atlas of Clear Cell Renal Cell Carcinoma. Cell. 2017;169:736–749.e18. doi: 10.1016/j.cell.2017.04.016. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 57.Thorsson V., Gibbs D.L., Brown S.D., Wolf D., Bortone D.S., Ou Yang T.-H., Porta-Pardo E., Gao G.F., Plaisier C.L., Eddy J.A., et al. The Immune Landscape of Cancer. Immunity. 2018;48:812–830.e14. doi: 10.1016/j.immuni.2018.03.023. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 58.Niccolai E., Taddei A., Ricci F., Rolla S., D’Elios M.M., Benagiano M., Bechi P., Bencini L., Ringressi M.N., Pini A., et al. Intra-tumoral IFN-γ-producing Th22 cells correlate with TNM staging and the worst outcomes in pancreatic cancer. Clin. Sci. 2016;130:247–258. doi: 10.1042/CS20150437. [DOI] [PubMed] [Google Scholar]
- 59.Zhang Q., He Y., Luo N., Patel S.J., Han Y., Gao R., Modak M., Carotta S., Haslinger C., Kind D., et al. Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma. Cell. 2019;179:829–845.e20. doi: 10.1016/j.cell.2019.10.003. [DOI] [PubMed] [Google Scholar]
- 60.Hellmann M.D., Friedman C.F., Wolchok J.D. Combinatorial Cancer Immunotherapies. Adv. Immunol. 2016;130:251–277. doi: 10.1016/bs.ai.2015.12.005. [DOI] [PubMed] [Google Scholar]
- 61.Ahmadzadeh M., Johnson L.A., Heemskerk B., Wunderlich J.R., Dudley M.E., White D.E., Rosenberg S.A. Tumor antigen–specific CD8 T cells infiltrating the tumor express high levels of PD-1 and are functionally impaired. Blood. 2009;114:1537–1544. doi: 10.1182/blood-2008-12-195792. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 62.Gros A., Robbins P.F., Yao X., Li Y.F., Turcotte S., Tran E., Wunderlich J.R., Mixon A., Farid S., Dudley M.E., et al. PD-1 identifies the patient-specific CD8+ tumor-reactive repertoire infiltrating human tumors. J. Clin. Invest. 2014;124:2246–2259. doi: 10.1172/JCI73639. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 63.Tumeh P.C., Harview C.L., Yearley J.H., Shintaku I.P., Taylor E.J.M., Robert L., Chmielowski B., Spasic M., Henry G., Ciobanu V., et al. PD-1 blockade induces responses by inhibiting adaptive immune resistance. Nature. 2014;515:568–571. doi: 10.1038/nature13954. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 64.Cristescu R., Mogg R., Ayers M., Albright A., Murphy E., Yearley J., Sher X., Liu X.Q., Lu H., Nebozhyn M., et al. Pan-tumor genomic biomarkers for PD-1 checkpoint blockade–based immunotherapy. Science. 2018;362:eaar3593. doi: 10.1126/science.aar3593. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 65.Topalian S.L., Hodi F.S., Brahmer J.R., Gettinger S.N., Smith D.C., McDermott D.F., Powderly J.D., Carvajal R.D., Sosman J.A., Atkins M.B., et al. Safety, Activity, and Immune Correlates of Anti–PD-1 Antibody in Cancer. N. Engl. J. Med. 2012;366:2443–2454. doi: 10.1056/NEJMoa1200690. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 66.Herbst R.S., Soria J.-C., Kowanetz M., Fine G.D., Hamid O., Gordon M.S., Sosman J.A., McDermott D.F., Powderly J.D., Gettinger S.N., et al. Predictive correlates of response to the anti-PD-L1 antibody MPDL3280A in cancer patients. Nature. 2014;515:563–567. doi: 10.1038/nature14011. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 67.Ayers M., Lunceford J., Nebozhyn M., Murphy E., Loboda A., Kaufman D.R., Albright A., Cheng J.D., Kang S.P., Shankaran V., et al. IFN-γ–related mRNA profile predicts clinical response to PD-1 blockade. J. Clin. Invest. 2017;127:2930–2940. doi: 10.1172/JCI91190. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 68.Yarchoan M., Hopkins A., Jaffee E.M. Tumor Mutational Burden and Response Rate to PD-1 Inhibition. N. Engl. J. Med. 2017;377:2500–2501. doi: 10.1056/NEJMc1713444. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 69.Magen A., Nie J., Ciucci T., Tamoutounour S., Zhao Y., Mehta M., Tran B., McGavern D.B., Hannenhalli S., Bosselut R. Single-Cell Profiling Defines Transcriptomic Signatures Specific to Tumor-Reactive versus Virus-Responsive CD4+ T Cells. Cell Rep. 2019;29:3019–3032.e6. doi: 10.1016/j.celrep.2019.10.131. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 70.Majzner R.G., Mackall C.L. Clinical lessons learned from the first leg of the CAR T cell journey. Nat. Med. 2019;25:1341–1355. doi: 10.1038/s41591-019-0564-6. [DOI] [PubMed] [Google Scholar]
- 71.Tarlock K., Alonzo T.A., Gerbing R.B., Raimondi S.C., Hirsch B.A., Sung L., Pollard J.A., Aplenc R., Loken M.R., Gamis A.S., et al. Gemtuzumab Ozogamicin Reduces Relapse Risk in FLT3/ITD Acute Myeloid Leukemia: A Report from the Children’s Oncology Group. Clin. Cancer Res. 2016;22:1951–1957. doi: 10.1158/1078-0432.CCR-15-1349. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 72.Di Stasi A., De Angelis B., Rooney C.M., Zhang L., Mahendravada A., Foster A.E., Heslop H.E., Brenner M.K., Dotti G., Savoldo B. T lymphocytes coexpressing CCR4 and a chimeric antigen receptor targeting CD30 have improved homing and antitumor activity in a Hodgkin tumor model. Blood. 2009;113:6392–6402. doi: 10.1182/blood-2009-03-209650. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 73.Kershaw M.H., Wang G., Westwood J.A., Pachynski R.K., Tiffany H.L., Marincola F.M., Wang E., Young H.A., Murphy P.M., Hwu P. Redirecting Migration of T Cells to Chemokine Secreted from Tumors by Genetic Modification with CXCR2. Hum. Gene Ther. 2002;13:1971–1980. doi: 10.1089/10430340260355374. [DOI] [PubMed] [Google Scholar]
- 74.Bodey B., Bodey B., Jr., Siegel S.E., Kaiser H.E. Failure of cancer vaccines: The significant limitations of this approach to immunotherapy. Anticancer. Res. 2000;20:2665–2676. [PubMed] [Google Scholar]
- 75.McGranahan N., Rosenthal R., Hiley C.T., Rowan A.J., Watkins T.B.K., Wilson G.A., Birkbak N.J., Veeriah S., Van Loo P., Herrero J., et al. Allele-Specific HLA Loss and Immune Escape in Lung Cancer Evolution. Cell. 2017;171:1259–1271.e11. doi: 10.1016/j.cell.2017.10.001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 76.Xu Z., Wang Y., Zhang L., Huang L. Nanoparticle-Delivered Transforming Growth Factor-β siRNA Enhances Vaccination against Advanced Melanoma by Modifying Tumor Microenvironment. ACS Nano. 2014;8:3636–3645. doi: 10.1021/nn500216y. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 77.Park J., Wrzesinski S.H., Stern E., Look M., Criscione J., Ragheb R., Jay S.M., Demento S.L., Agawu A., Licona Limon P., et al. Combination delivery of TGF-β inhibitor and IL-2 by nanoscale liposomal polymeric gels enhances tumour immunotherapy. Nat. Mater. 2012;11:895–905. doi: 10.1038/nmat3355. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 78.Cannarile M.A., Weisser M., Jacob W., Jegg A.-M., Ries C.H., Rüttinger D. Colony-stimulating factor 1 receptor (CSF1R) inhibitors in cancer therapy. J. Immunother. Cancer. 2017;5:53. doi: 10.1186/s40425-017-0257-y. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 79.Braunstein M.J., Kucharczyk J., Adams S. Targeting Toll-Like Receptors for Cancer Therapy. Target. Oncol. 2018;13:583–598. doi: 10.1007/s11523-018-0589-7. [DOI] [PubMed] [Google Scholar]
- 80.Van Herpen C.M.L. Intratumoral Recombinant Human Interleukin-12 Administration in Head and Neck Squamous Cell Carcinoma Patients Modifies Locoregional Lymph Node Architecture and Induces Natural Killer Cell Infiltration in the Primary Tumor. Clin. Cancer Res. 2005;11:1899–1909. doi: 10.1158/1078-0432.CCR-04-1524. [DOI] [PubMed] [Google Scholar]
- 81.Nishio N., Diaconu I., Liu H., Cerullo V., Caruana I., Hoyos V., Bouchier-Hayes L., Savoldo B., Dotti G. Armed Oncolytic Virus Enhances Immune Functions of Chimeric Antigen Receptor-Modified T Cells in Solid Tumors. Cancer Res. 2014;74:5195–5205. doi: 10.1158/0008-5472.CAN-14-0697. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 82.Peng D., Kryczek I., Nagarsheth N., Zhao L., Wei S., Wang W., Sun Y., Zhao E., Vatan L., Szeliga W., et al. Epigenetic silencing of TH1-type chemokines shapes tumour immunity and immunotherapy. Nature. 2015;527:249–253. doi: 10.1038/nature15520. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 83.Shrimali R.K., Yu Z., Theoret M.R., Chinnasamy D., Restifo N.P., Rosenberg S.A. Antiangiogenic Agents Can Increase Lymphocyte Infiltration into Tumor and Enhance the Effectiveness of Adoptive Immunotherapy of Cancer. Cancer Res. 2010;70:6171–6180. doi: 10.1158/0008-5472.CAN-10-0153. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 84.Blank C.U., Haanen J.B., Ribas A., Schumacher T.N. The “cancer immunogram”. Science. 2016;352:658–660. doi: 10.1126/science.aaf2834. [DOI] [PubMed] [Google Scholar]