TABLE 2.
Cytoskeleton-related genes DE in the host (ATCC 52813) during physical interaction with Mycetohabitans sp. B13
| Protein ID |
Log2
FCa |
FDRb | Annotationc | Organism |
|---|---|---|---|---|
| 252161 | 2.65 | 1.07E−07 | Rho-GTPase-activating protein BAG7 | Saccharomyces cerevisiae |
| 60967 | 2.56 | 6.19E−04 | Rho1 guanine nucleotide exchange factor 2 | Schizosaccharomyces pombe |
| 242325 | 1.89 | 1.23E−11 | Hypothetical LIM domain-containing protein | Rhizopus microsporus |
| 310169 | 1.73 | 5.14E−06 | Hypothetical LIM domain-containing protein | Rhizopus microsporus |
| 225711 | 1.58 | 1.29E−06 | Actinin-like protein | Laccaria bicolor |
| 280334 | 1.43 | 1.10E−08 | CAP-Gly domain-containing protein | Rhizopus delemar |
| 198343 | 1.42 | 3.20E−06 | Myosin | Rhizopus microsporus |
| 240217 | 1.32 | 9.42E−14 | Regulator of cytoskeleton and endocytosis RVS167 | Candida albicans |
| 274088 | 1.21 | 3.24E−05 | Probable Rho-type GTPase-activating protein 2 | Schizosaccharomyces pombe |
| 181905 | 1.20 | 8.24E−05 | Myosin | Rhizopus microsporus |
| 266182 | 1.19 | 5.69E−04 | Kinase with actin-binding calponin homology domain | Rhizopus delemar |
| 128872 | 1.14 | 4.00E−03 | Hypothetical LIM domain-containing protein | Mucor circinelloides |
| 226218 | 1.01 | 4.85E−03 | Probable Rho-GTPase-activating protein 7 | Schizosaccharomyces pombe |
| 235547 | 1.00 | 4.26E−07 | BZZ1 | Saccharomyces cerevisiae |
| 245977 | 0.92 | 4.55E−09 | Fimbrin | Rhizopus delemar |
| 236201 | 0.70 | 1.57E−04 | Protein dip1 | Schizosaccharomyces pombe |
| 237596 | 0.69 | 4.25E−04 | Rho-GTPase-activating protein BAG7 | Saccharomyces cerevisiae |
| 249809 | 0.67 | 1.42E−04 | Cofilin/tropomyosin-type actin-binding domain- containing protein |
Rhizopus microsporus |
| 291147 | 0.64 | 6.85E−03 | PH domain-containing protein | Rhizopus microsporus |
| 244149 | 0.55 | 8.39E−04 | Myosin I | Mucor circinelloides |
| 233557 | −0.54 | 1.36E−03 | Tubulin-folding cofactor D | Schizosaccharomyces pombe |
| 236630 | −0.63 | 6.23E−03 | Rho guanine nucleotide exchange factor SCD1 | Schizosaccharomyces pombe |
| 15091 | −0.81 | 3.17E−03 | RhoGAP domain-containing protein | Rhizopus microsporus |
a
Log2 FC, log2 fold change. Positive log2 FC values denote upregulated genes, and negative log2 FC values denote downregulated genes.
b
FDR, false discovery rate.
c
Annotations were obtained manually by PSI-BLAST searches (102) of the Swiss-Prot/UniProtKB database.