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. 2020 Sep 23;15(9):e0237770. doi: 10.1371/journal.pone.0237770

Novel dual HIV maintenance therapy with nevirapine plus lamivudine retain viral suppression through 144 weeks—A proof-of-concept study

C R Kahlert 1,2,*, M Cipriani 1, P Vernazza 1
Editor: Giuseppe Vittorio De Socio3
PMCID: PMC7511013  PMID: 32966293

Abstract

Objectives

The aim of this proof-of-concept study is to test feasibility and efficacy of NVP plus Lamivudine (3TC) as novel simplified HIV maintenance dual therapy (DT) strategy.

Methods

Patients under combined antiretroviral treatment (cART) with fully suppressed HIV plasma viral load (pVL) >24 months–whereof >6 months on an NVP- containing regimen—were switched to oral NVP plus 3TC for 24 weeks. Patients could then decide whether to continue DT or return to the previous cART. HIV pVL was monitored monthly until week 144. The primary outcome was confirmed viral failure (RNA >100 copies/ml). Low-level detection of HIV‐RNA in plasma was compared in each patient with pre-study viral load measurements.

Results

Twenty patients were included, switched to DT and all completed week 24. One patient decided thereafter to discontinue study participation for personal reasons. After a total of 144 observation weeks, none of the patients failed. The frequency of low- level HIV-RNA detection was not different from the period before randomization.

Conclusions

Our findings are surprising but given the nature of a proof-of-concept study, the results do not support the use of this dual regimen. However, as this dual HIV maintenance strategy was feasible and effective, over a period of 144 weeks, we suggest NVP plus 3TC warrants further evaluation as potential maintenance option in patients tolerating nevirapine. A properly sized multicentre non-inferiority trial is ongoing to further evaluate the value of this DT maintenance strategy.

Introduction

Today, combination antiretroviral therapy (cART) is recommended for all patients with HIV infection [1]. Lifelong cART demand from the patient a long breath by daily regular intake of medication and is associated with potential long-term adverse events and high cost. The combination of several antiretroviral compounds is essential at the start of treatment, as high viral replication can allow rapid development of resistance. Most of currently recommended cART regimen for treatment induction, quickly result in undetectable HIV plasma viral load (pVL). Afterwards, viral replication is completely suppressed and a simplified treatment with two antiretroviral compounds (dual therapy–DT) or even one substance (monotherapy) may hypothetically control viral replication on the long run. The underlying hypothesis of a simplified treatment with two antiretroviral compounds (dual therapy–DT) or even one substance (monotherapy) is, that low viral replication is associated with a reduced risk of viral escape and thus may control viral replication on the long run. Moreover, less drugs translates into lower risk of long-term adverse events and reduced costs. However, most monotherapy trials (MT) showed elevated occurrence of a short-term increase in HIV pVL >50–200 copies/ml that is followed by HIV viral suppressions and is considered a viral "blip" [2]. As a possible explanation, some MT demonstrated evidence for a decreased antiretroviral activity in the central nervous system [3, 4].

Nevirapine (NVP), a non-nucleoside reverse-transcriptase-inhibitor (NNRTI) and lamivudine (3TC) a nucleoside reverse-transcriptase-inhibitor (NRTI) are two drugs that are known for more than 20 years in clinical practice with documented long-term tolerance and efficacy over decades [57]. They are available as generic drugs and thus represent a cost saving strategy. For both compounds, compartment penetration into sanctuaries including the central nervous system is exceptional [8]. Interestingly, a recent study evaluating the decrease of the HIV-DNA reservoir in HIV infected individuals under cART identified NVP therapy as a distinct factor reducing the viral reservoir [9]. Further studies are needed to understand to what extent the outstanding compartment penetration of NVP explains this hitherto unknown advantage of NVP therapy.

Though, clinical use of NVP has declined in recent years and it is currently no longer listed in international guidelines for high-income countries because of a potentially severe adverse drug reaction hypersensitivity reaction (HSR) with maculopapular rash and/or elevated liver enzymes in 7% of patients [10]. When NVP is used in the induction of antiretroviral therapy, about 1% develop potentially lethal reactions including Stevens-Johnson and Lyell-syndromes [11]. HSR to NVP predominantly occurs during the first 12 weeks after start of the drug with a median time from NVP-start to HSR of 30 days (interquartile range [IQR] 17–60) [10]. Although a genetic predisposition to HSR has been suspected, no genetic variants have been consistently associated with the disease so far and currently, it is impossible to absolutely predict NPV-HSR. Therefore, initial close follow-up ensures early detection of potential side effects and is crucial to avoid irreversible adverse drug reactions in patients.

Several risk factors for HSR have been identified in particular a high HIV plasma viral load (pVL) and for this reason NVP is not recommended during the induction of antiretroviral treatment. Based on evidence in over 5000 patients on NVP from three cohorts [12, 13], the situation seems different in the setting of maintenance with a fully suppressed HIV pVL. Accordingly, once HIV-RNA is fully suppressed, the risk of HSR after switching to a NVP-based regimen is lower, and independent of the CD4-count at initiation of NVP. In a recent analysis of this strategy in our clinic, we demonstrated that for NVP-based therapies with a duration of >90 days (n = 221), the overall discontinuation rate was 5.4/100 person years (95% confidence interval [CI] 4.0–7.2) [14]. Combining the above-mentioned benefits of DT and NVP, patients who are stably supressed for more than 6 months on an NVP-based therapy could profit from a combination of NVP and 3TC. Thus, for this study, we hypothesized that NVP-containing DT with 3TC may provide an optimal HIV maintenance therapy. The aim of this proof of concept study is to test the feasibility and efficacy of this strategy before evaluation in a larger trial.

Methods

Patients on a stable NVP-containing regimen (>6 months) with a fully suppressed HIV pVL (≤ 50 copies/ml) for more than 24 months were switched to DT with oral NVP (400mg/d) and 3TC (300mg/d). Both compounds were administered once daily with or without food. HIV pVL was monitored monthly until week 24 (COBAS® TaqMan® 48 Analyzer by Roche Diagnostics). The primary outcome was confirmed viral failure (RNA >100 copies/ml) within 24 weeks. To limit the potential harm to patients in particular to prevent the development of resistance in the event of virus failure, a stopping rule was implemented. The study would have been terminated prematurely if two patients would have demonstrated viral failure. In addition, the protocol required a stepwise inclusion: After the five first inclusions further inclusion of five more patients was initiated after all five first patients have reached week 12 without viral failure. When 10 patients reached week 12, the remaining 10 patients were included. After week 24, patients were offered to be further continued on DT and monitored every 8 weeks for another 24 weeks. Subsequently, monitoring was reduced to every 12 weeks until week 96 and every 24 weeks until week 144. The frequency of low-level detection of HIV pVL (<20, 20–50, >50 copies/ml) was compared in each patient with pre-study viral load measurements. Since all patients were also participants of the Swiss HIV Cohort Study (SHCS), treatment adherence was assessed with the self-report instrument used in the SHCS every 24 weeks. Descriptive statistics were used to characterize the study population. This study was approved by the cantonal ethics committee (Ethikkommission Ostschweiz, EKOS, ID: EKOS 2016–01963) and registered (ClinicalTrials.gov Identifier: NCT03223402). All participants provided written informed consent.

Results

Recruitment was initiated in December 2016 and all patients were recruited over a period of 6 months. Twenty patients were included and switched to DT with 3TC and NVP (Fig 1). At baseline, all participants had undetectable HIV pVL. All reached the 24-week primary endpoint. 19/20 (95%) patients decided to continue on DT. One patient decided not to continue the observation period for personal reasons.

Fig 1. Flow chart of participant enrolment, follow up and observation period.

Fig 1

Study flow with illustration of stepwise enrolment.

We here present the complete follow up until week 144. Patient characteristics are presented in Table 1.

Table 1. Patient baseline characteristics.

Patients included in the pilot study 20 (100%)
Age (years)
mean 52.4
maximum 81
minimum 34
Gender
Female 5 (25%)
Male 15 (75%)
Race
Caucasian 20 (100%)
Relevant Comorbidity
Hepatitis C 1 (5%)
Hepatitis B (HBV-DNA suppressed) 1 (5%)
Co-Medication
Antihypertensive 3 (15%)
Statins 3 (10%)
Antithrombotic agents 2 (10%)
Antiplatelet 1 (5%)
Time on ART (years)
median 7.5
maximum 22
minimum 3
HIV-Stage (CDC classification)
A1 2 (10%)
A2 11 (55%)
A3 1 (5%)
B2 1 (5%)
B3 1 (5%)
C3 (2x PcP, 1x TB, 1x esophageal candidiasis) 4 (20%)
CD4 Nadir (CD4/μl, %)
mean 266 (16%)
maximum 580
minimum 0
last before switch to DT:
mean 680 (38%)
maximum 1170
minimum 260
Time on NVP before pilot study (months)
median 54.5
maximum 88
minimum 6
Last ART before pilot study
3TC ABC NVP 16 (80%)
TDF ETC NVP 4 (20%)

CDC classification available under: https://www.cdc.gov/mmwr/preview/mmwrhtml/00018871.htm

ART: antiretroviral therapy, NVP: Nevirapine, 3TC: Lamivudine, ABC: Abacavir, TDF: Tenofovir, ETC: Emtricitabine PcP: Pneumocystis jirovecii pneumonia, TB: tuberculosis.

Patients were generally pre-treated for a long time, with a median time on cART of 7.5 years (IQR 6–12). One patient had chronic hepatitis B (HBV) co-infection with suppressed HBV-DNA on a tenofovir-containing cART. However, the patient insisted on discontinuing tenofovir because of personal concern about tubular side effects and suspected inhibition of telomerase activity by this drug. In addition, the patient was highly motivated to participate in this study, for which reason the principal investigator made an exception to the exclusion criterion. After switch to 3TC-containing DT, this patient still showed a negative HBV viral load.

During 144 weeks, no patient failed DT with NVP and 3TC (Fig 2). Of notice, all measurements were <50 copies/ml, except one value of 55 copies/ml at week 96, which resulted to be <20 copies/ml after repetition at week 99. Low-level plasma HIV-RNA detections was rare both during the study and observation period (309 HIV-RNA measurements) and during 144 weeks prior to the study, on stable cART (120 measurements). In order to compare the likelihood of blips in both periods, we compared the proportion of measurements with detectable HIV-RNA or HIV-RNA ≥ 20 copies/ml before and during the study for every patient and compared these proportions between the two periods with Wilcoxon signed-rank tests. Both comparisons revealed very similar frequencies of blips before and during DT, and no significant change (detectable mean frequeny: 17.1% vs 15.7%, p = 0.43; >20cp/ml: 1.2% vs. 4.2%, p = 0.28).

Fig 2. Plasma HIV-RNA during week 0—week 144.

Fig 2

The HIV RNA results is displayed for all participants.

Conclusion

In this proof-of-concept study of 20 HIV patients on a stable NVP-containing maintenance DT with 3TC, HIV pVL remained suppressed in all 20 patients for 24 weeks. Furthermore, 19 patients who continued DT after the primary endpoint during the observation phase remained stably suppressed until week 144. To the best of our knowledge, these findings have not been described before and thus are of interest as proof of concept. This novel maintenance cART strategy is attractive because effective and safe in selected patients tolerating NVP for more than 6 months and stable viral suppression. As both drugs have been used for more than 20 years, there is extensive experience with the long-term safety in addition to the benefit of cost savings.

Our study has several limitations. This was a small single-centre, non-randomized, single-arm study. All patients were fully suppressed for at least 24 months and tolerated NVP for minimally 6 months. However, in this population, all patients kept full HIV pVL suppression and even the frequency of blips with DT was similar to the pre-study period where patients received cART with 3 compounds. Although this does not guarantee success in a properly sized clinical trial, this is remarkable because NVP has a low resistance barrier and requires only a single mutation in the reverse transcriptase genome. But as stated, this risk is greatest in the beginning of therapy when ongoing viral replication allows the selection of resistant mutants. The observation of a stable rate of viral blips after treatment simplification contrasts with the observation of an increased rate of viral blips in many monotherapy studies, even if compounds with a high barrier against drug resistance have been used [15]. Given the documentation of viral failure of protease monotherapy in the central nervous system [3, 4], we hypothesize that the excellent compartment penetration of NVP and 3TC is an important characteristic of the DT selected in this study. Protease inhibitors and integrase strand transfer inhibitors were both suggested for monotherapy, due to the high genetic barrier but exhibited limited activity as monotherapy. A high penetration into sanctuaries may thus be more important than a high genetic barrier in the context of antiretroviral maintenance. This hypothesis is further supported by the increased correlation of NVP use with undetectable proviral HIV-DNA [9]. However, this study was unable to prove or rule out low-level resistance in participants with a blip. Our attempt to perform next generation sequencing from the sample with an HIV-RNA value of 55 copies/ml was unsuccessfull.

Today, nevirapine is used less frequently in clinical practice in particular in high-income countries. The main reason is the high risk of hypersensitivity reactions (HSR) at treatment start. An additional reason might also be the lack of any supporting marketing effort. After the demonstration of markedly reduced HSR-rates when initiated with undetectable viral load [10, 12, 13], the marketing efforts to re-introduce the drug into the marked were almost nil. The cost saving potential of the use of generic drugs is immense. Despite the risks and lack of marketing efforts for this "old drug", NVP has been used by some patients for many years and is available as a generic drug in high-income countries. In an evaluation of a strategic decision to use nevirapine as part of standard maintenance cART we recently were able to demonstrate that more than a third of patients could safely be switched to nevirapine [14].

In summary, given the sample size, our findings do not reject the null-hypothesis that dual therapy is equally effective as standard therapy. Still, the results of this proof-of-concept study support further evaluation of this novel dual HIV strategy using NVP plus 3TC as potential maintenance option in HIV infected patients tolerating NVP. As argued above, the advantage is long-term safety and cost. A properly sized multicentre non-inferiority trial is ongoing to further evaluate the value of this DT maintenance strategy.

Supporting information

S1 File. TREND statement checklist.

(PDF)

S2 File. Study protocol.

(PDF)

Acknowledgments

The authors acknowledge the participation of the patients and the helpful support of Patrick Schmid and the whole clinic staff. In addition, we thank Prof. Thomas Klimkait (Department of Biomedicine, Molecular Virology, University of Basel, Switzerland) for the collaboration on performing next generation sequencing on samples showing a blip and Dr. Sabine Güsewell (Clinical Trials Unita Cantonal Hospital St. Gallen, Switzerland) for her statistical support.

Data Availability

The minimal data set underlying the study is available in a data repository with the address: https://doi.org/10.5281/zenodo.3974105.

Funding Statement

The author(s) received no specific funding for this work.

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Decision Letter 0

Alan Winston

Transfer Alert

This paper was transferred from another journal. As a result, its full editorial history (including decision letters, peer reviews and author responses) may not be present.

19 Nov 2019

PONE-D-19-28328

NOVEL DUAL HIV MAINTENANCE THERAPY WITH NEVIRAPINE PLUS LAMIVUDINE RETAIN VIRAL SUPPRESSION THROUGH 96 WEEKS - A PROOF-OF-CONCEPT STUDY

PLOS ONE

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Reviewer #1: 1) Evidently this is an interesting piece of work that requires further evaluation in a larger study for patients who are currently taking nevirapine.

The paper states that nevirapine is a safe drug to switch to "regardless of CD4 count" in those who are undetectable on ART. I think that there are some significant questions about nevirapine as a stable switch strategy which are not addressed in this paper. The evidence concerning this question is observational and retrospective. The comparator in these papers is rate of HSR in anti-retroviral naive patients with low CD4 counts starting nevirapine not people starting ART containing alternative agents. Indeed in the paper of Wit et al, 2008 for those patient switching to nevirapine in the "high-high" group, the lower limit of the confidence interval for the odds of HSR only just touches 1. This is a drug assoicated with liver toxicity and HSR but with guidelines which limit the risk of these adverse events.

I think it is important to clarify this as, while the ambition to maintain use of older, cost-effective drugs is admirable, readers should be aware of this limitation in the context of the wide availability of other third agents and strategies in the current era. If we are only comparing nevirapine with nevirapine then this strategy has limited scope.

2) I think you might want to just check through the references again - line 181 indicates reference 8 with respect to reduced HSR, but this reference is about CNS PK.

Reviewer #2: Thank you for this interesting and, as you say in your conclusion, surprising study. I think this deserves publication but with some amendments:

1) Abstract conclusion: "Our findings are surprising but do not falsify the null-hypothesis that dual therapy is inferior to standard therapy" - I do not understand this statement. Do you mean to say that "this pilot study, though promising, is not powered to prove whether this therapy option is non-inferior to standard of care" - please revise so clear

2) You abstract conclusion point "having the advantage of reduced adverse events and cost" should be removed. You have not demonstrated, as far as I can see, reduced AE in this small, single arm pilot and in the era of largely generic NRTI there may be no cost advantage - indeed, in England, the difference between 3TC and TDX/FTC generic is less than £1 a week....

3) I think to describe your own findings as 'surprising' you need to better justify your rationale for undertaking the trial and expand on the information provided to participants with respect to risk of failure or resistance development

4) The fact that NVP is not recommended in any high-income country guidelines should be acknowledged; similarly you need to provide some clinical context for recommending a regimen like this - why choose NVP/3TC over more established tripe/dual options?

5) Please include some discussion as to the value of pilots e.g. PADDLE is an example of promising pilot findings being replicated in a larger single-arm study and then large RCTs, PI/r + MVC is an example whereby promising single-arm results were not replicated in RCTs

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PLoS One. 2020 Sep 23;15(9):e0237770. doi: 10.1371/journal.pone.0237770.r002

Author response to Decision Letter 0


3 Dec 2019

***RESPONSE*** to REVIEWER COMMENTS

Reviewer #1

1) Evidently this is an interesting piece of work that requires further evaluation in a larger study for patients who are currently taking nevirapine. The paper states that nevirapine is a safe drug to switch to "regardless of CD4 count" in those who are undetectable on ART. I think that there are some significant questions about nevirapine as a stable switch strategy which are not addressed in this paper. The evidence concerning this question is observational and retrospective. The comparator in these papers is rate of HSR in anti- retroviral naive patients with low CD4 counts starting nevirapine not people starting ART containing alternative agents. Indeed in the paper of Wit et al, 2008 for those patient switching to nevirapine in the "high-high" group, the lower limit of the confidence interval for the odds of HSR only just touches 1. This is a drug assoicated with liver toxicity and HSR but with guidelines which limit the risk of these adverse events. I think it is important to clarify this as, while the ambition to maintain use of older, cost-effective drugs is admirable, readers should be aware of this limitation in the context of the wide availability of other third agents and strategies in the current era. If we are only comparing nevirapine with nevirapine then this strategy has limited scope.

***We thank the reviewer for these constructive and helpful comments. Absolutely, the caution of using Nevirapine must remain clearly articulated. We have adapted the introduction accordingly. We specified that the evidence is based on cohort studies and changed the sentence from “ART can be safely switched” to “the risk of HSR after switching to a NVP-based regimen is lower” (Line 76). At the same time, we would like to emphasize that we do not propose a switch in our manuscript, but instead propose dual therapy (DT) with NVP and 3TC as maintenance for patients who tolerate NVP more than 6 months.***

2) I think you might want to just check through the references again - line 181 indicates reference 8 with respect to reduced HSR, but this reference is about CNS PK.

***We totally agree and thank the reviewer for this comment. The reference was changed from reference 8 to references 10,12 and 13.***

Reviewer #2

Thank you for this interesting and, as you say in your conclusion, surprising study. I think this deserves publication but with some amendments:

1) Abstract conclusion: "Our findings are surprising but do not falsify the null-hypothesis that dual therapy is inferior to standard therapy" - I do not understand this statement. Do you mean to say that "this pilot study, though promising, is not powered to prove whether this therapy option is non-inferior to standard of care" – please revise so clear

***We thank the reviewer for all these valuable comments and suggestions. In this sentence we want to clearly express that the results do not support the use of this DT maintenance therapy due to the small sample size. However, they are surprising and do support the conduct of a properly sized clinical trial. To elucidate this intention, both the summary and the last paragraph of the manuscript have been adapted.***

2) You abstract conclusion point "having the advantage of reduced adverse events and cost" should be removed. You have not demonstrated, as far as I can see, reduced AE in this small, single arm pilot and in the era of largely generic NRTI there may be no cost advantage - indeed, in England, the difference between 3TC and TDX/FTC generic is less than £1 a week....

***You are right, a study design without a control group cannot prove a reduction of adverse events. Therefore, we removed this sentence from the abstract conclusion. However, it is evident that the risk for cART-associated long-term side effects is reduced with a DT versus triple cART. Concerning reduced costs, this of course varies by country. In Switzerland, we currently still do not have generic TDF/FTC that’s why the difference with 3TC is still significant with about £140 a week. With regard to NVP, the cost saving potential is even more than 50% compared to a therapy with e.g. dolutegravir.***

3) I think to describe your own findings as 'surprising' you need to better justify your rationale for undertaking the trial and expand on the information provided to participants with respect to risk of failure or resistance development

***Thank you for this comment. Because there is no previous experience with NVP- containing DT and in order to rapidly detect a possibly increased risk of viral failure, special safety precautions have been included in the protocol. First, a stopping rule was implemented (stop of the study in the event of viral failure in two patients) and second, the protocol required a stepwise inclusion (3 steps). This is additionally illustrated in the study flow (Figure 1). In order to further clarify this issue, we modified the sentence (Line 90-93), adding “in particular to prevent the development of resistance in the *event of virus failure”. All patients included signed informed consent containing information on the potential risk of failure and development of *resistance and this information was approved by the local ethical review board.***

4) The fact that NVP is not recommended in any high-income country guidelines should be acknowledged; similarly you need to provide some clinical context for recommending a regimen like this - why choose NVP/3TC over more established tripe/dual options?

***Thank you, that's correct. In order to make this clear, we have both changed the introduction (Line 61-64) and the conclusion (Line 205-206). Justification of this regimen is covered in the introduction as well as in the conclusion (more than 20 years of experience with documented long-term tolerance and efficacy over decades, compartment penetration, prize).***

5) Please include some discussion as to the value of pilots e.g. PADDLE is an example of promising pilot findings being replicated in a larger single-arm study and then large RCTs, PI/r + MVC is an example whereby promising single-arm results were not replicated in RCTs

***You're right, a successful pilot does not guarantee success in a large RCT. To disclose this concern, we have added an additional point to the limitations *(Line 191-193).***

Attachment

Submitted filename: 20191202_response-to-reviewers.pdf

Decision Letter 1

Giuseppe Vittorio De Socio

30 Jan 2020

PONE-D-19-28328R1

NOVEL DUAL HIV MAINTENANCE THERAPY WITH NEVIRAPINE PLUS LAMIVUDINE RETAIN VIRAL SUPPRESSION THROUGH 96 WEEKS - A PROOF-OF-CONCEPT STUDY

PLOS ONE

Dear Dr. Kahlert,

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Academic Editor

PLOS ONE

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Reviewers' comments:

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Comments to the Author

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Reviewer #2: All comments have been addressed

Reviewer #3: (No Response)

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Reviewer #3: Partly

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Reviewer #2: N/A

Reviewer #3: No

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Reviewer #2: Yes

Reviewer #3: No

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Reviewer #2: Thank you for your amendments - you have addressed my comments thoroughly and I am happy to recommend the paper for publication.

Reviewer #3: This is a descriptive analysis of a small pilot study evaluating the potential use of the dual combination 3TC+NVP in people with current fully suppressed HIV-RNA who have shown previous long term virological success and tolerability on NVP-based triple therapy. The argument for testing this combination is the existence of over 20 years of use of these drugs in the clinics with documented long-term tolerance and efficacy, excellent penetration in sanctuary and reduced costs compared to other dual regimens (at least in Switzerland).

The main issue with these drugs in the context of dual therapy, rather than the risk of HSR, is the low barrier to drug resistance (not just for NVP but also for 3TC). The argument that a high penetration into sanctuaries may be more important than a high genetic barrier in the context of antiretroviral maintenance is not particularly convincing. This is because i) viral load response in this trial is shown as average proportions and ii) there is no measure of low-level HIV resistance in the study. More detailed results should be presented to deserve publication, I have some suggestions below:

Main points

1. What is the definition of 'fully suppressed' viral load (inclusion criteria of trial)? <1 copy/mL? <=50 copies/mL? The actual breakdown of the viral load distribution at week 0 could be shown in Table 1

2. Are there stored samples available in which to measure low-level drug resistance? It is currently possible to measure resistance even when viral load is very low. If authors could show that there was, say, no 103N or 184V in minor populations at week 96 this finding would decrease concerns around clinical use of this combination. HSR and cost are less important issues in my opinion. Most mono/dual combinations with low resistance barrier have shown inferiority when compared to standard triple regimens in head to head RCTs. The lack of resistance data should at least be mentioned in the Discussion.

3. With a sample size of 20 patients it is easy to show spaghetti plots with the full viral load trajectories for the all study population, including the 96 week before and after the inclusion into the pilot maintenance study. It is mentioned on line 190-192 that However, in this population, all patients kept full HIV pVL suppression and even the frequency of blips with DT was equal to the pre-study period where patients received cART with 3 compounds. This is not supported by data shown in Figure 2 because this includes average proportions and it is not possible to say whether blips where more/less frequent over the pilot study than over the previous period in individual patients. Indeed, there seems to be evidence in aggregate of people moving from the ≤1 copy/mL stratum (78% vs 86%) to the 2-20 copies/mL stratum (19% vs 10%) under dual therapy. Spaghetti plots will give more insights and possibility to develop specific statistical tests to compare the frequency of blips before and after the switch.

4. There is no control group in this trial so the only possible comparison is with historical values of viral load measured over the previous period under triple therapy. Intermittent time series approach for average viral load levels comparing the slope before and after the switch to dual can be used to confirm that there is no evidence for a difference in the slopes in the two periods. This auto-regressive method is very powerful and commonly used in mono-arm trials with no control group now also in HIV research.

5. Legend for Figure 2. I would modify the label for the stratum ‘>50’ into ‘50-100’ copies/mL. Or where there people who showed blip >100 copies/mL?

Other Points

1. Line 44-46. Afterwards, viral replication is completely suppressed and a simplified treatment with two antiretroviral compounds (dual therapy – DT) or even one substance (monotherapy) may control viral replication on the long run. This sentence needs to be qualified. None of the mono-therapy regimens have shown particularly encouraging results; same story applies to some of the dual combinations, shown to be inferior to triple therapy (e.g. those including maraviroc etc).

2. Line 171. Typo NVP and 3TC, not und

3. A previous reviewer pointed out that sentence in lines 233-234 was not particularly clear. This has now been revised in the current version in ‘In summary, given the sample size, our findings do not reject the null-hypothesis that dual therapy is equally effective as standard therapy’. I think that this is still inaccurate; the study does not support equivalence of the dual therapy with triple therapy because there is no control group. Lack of a plausible causal argument is more important than statistical power.

4. It is mentioned in the Conclusions (lines 237-238) and Abstract that ‘A properly sized multicentre non-inferiority trial is ongoing to further evaluate the value of this DT maintenance strategy’. Does this trial really exist? There seems to be no sign of such a trial in https://clinicaltrials.gov/. It would be useful to give more information on the status of such trial.

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Reviewer #2: No

Reviewer #3: No

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Decision Letter 2

Giuseppe Vittorio De Socio

4 Aug 2020

NOVEL DUAL HIV MAINTENANCE THERAPY WITH NEVIRAPINE PLUS LAMIVUDINE RETAIN VIRAL SUPPRESSION THROUGH 144 WEEKS - A PROOF-OF-CONCEPT STUDY

PONE-D-19-28328R2

Dear Dr. Kahlert,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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Kind regards,

Giuseppe Vittorio De Socio, MD, PhD

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Acceptance letter

Giuseppe Vittorio De Socio

9 Sep 2020

PONE-D-19-28328R2

Novel Dual Hiv Maintenance Therapy With Nevirapine Plus Lamivudine Retain Viral Suppression Through 144 Weeks - A Proof-Of-Concept Study

Dear Dr. Kahlert:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

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on behalf of

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Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 File. TREND statement checklist.

    (PDF)

    S2 File. Study protocol.

    (PDF)

    Attachment

    Submitted filename: 20191202_response-to-reviewers.pdf

    Attachment

    Submitted filename: 20200729_nvp3tc_p2p_reply_r2_submitted.pdf

    Data Availability Statement

    The minimal data set underlying the study is available in a data repository with the address: https://doi.org/10.5281/zenodo.3974105.


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