Table 4.
Sequence length, sequence quality, first hit by nucleotide identity when compared against the NCBI database and accession number of partial 16S rRNA sequences generated in this study from eight samples from six raptors and 66 samples from 49 corvids from Switzerland.
| Sample Nr. | Species Name (English) | Sequence Length (bp) | Sequence Quality (%) | First Hit | Nucleotide Identity (%) | Accession Number |
|---|---|---|---|---|---|---|
| Raptors | ||||||
| 14C | Common buzzard | 245 | 26.1 | C. psittaci M56 | 99.59 | MT423441 |
| 311K | Common kestrel | 269 | 80.3 | C. psittaci M56 | 100 | MT423442 |
| 556C | Common buzzard | 239 | 30.1 | C. psittaci M56 | 100 | MT423443 |
| 556K | Common buzzard | 278 | 83.1 | C. psittaci M56 | 100 | MT423444 |
| 566C | Common buzzard | 278 | 80.9 | C. abortus 15-58d44 | 100 | MT423446 |
| 669K | Common buzzard | 271 | 83.0 | C. psittaci M56 | 100 | MT423448 |
| 671C | Common buzzard | 260 | 32.7 | C. psittaci M56 | 98.85 | MT423449 |
| 671K | Common buzzard | 269 | 77.3 | C. psittaci M56 | 100 | MT423450 |
| Corvids | ||||||
| 565C | Carrion crow | 253 | 82.2 | C. abortus 15-58d44 | 100 | MT423445 |
| 621C | Rook | 274 | 75.2 | C. abortus 15-58d44 | 100 | MT423447 |
| 686C | Carrion crow | 271 | 40.6 | C. abortus 15-58d44 | 99.63 | MT423451 |
| 688C | Carrion crow | 252 | 80.2 | C. abortus 15-58d44 | 100 | MT423452 |
| 688K | Carrion crow | 279 | 73.8 | C. abortus 15-58d44 | 100 | MT423453 |
| 689C | Carrion crow | 271 | 79.3 | C. abortus 15-58d44 | 100 | MT423454 |
| 689K | Carrion crow | 249 | 25.7 | C. abortus 15-58d44 | 95.58 | MT423455 |
| 690C | Carrion crow | 253 | 80.6 | C. abortus 15-58d44 | 100 | MT423456 |
| 696C | Carrion crow | 276 | 78.3 | C. abortus 15-58d44 | 100 | MT423457 |
| 702C | Carrion crow | 275 | 80.7 | C. abortus 15-58d44 | 100 | MT423458 |
| 705C | Carrion crow | 278 | 71.6 | C. abortus 15-58d44 | 100 | MT423459 |
| 706C | Carrion crow | 256 | 80.1 | C. abortus 15-58d44 | 100 | MT423460 |
| 711C | Carrion crow | 260 | 85.4 | C. abortus 15-58d44 | 100 | MT423461 |
| 716K | Carrion crow | 272 | 84.2 | C. abortus 15-58d44 | 100 | MT423462 |
| 721C | Carrion crow | 253 | 81.4 | C. abortus 15-58d44 | 100 | MT423463 |
| 725C | Carrion crow | 267 | 81.3 | C. abortus 15-58d44 | 100 | MT423464 |
| 735C | Carrion crow | 267 | 76.8 | C. abortus 15-58d44 | 100 | MT423465 |
| 736C | Carrion crow | 253 | 80.6 | C. abortus 15-58d44 | 100 | MT423466 |
| 736K | Carrion crow | 271 | 76.8 | C. abortus 15-58d44 | 100 | MT423467 |
| 737C | Carrion crow | 275 | 77.5 | C. abortus 15-58d44 | 100 | MT423468 |
| 737K | Carrion crow | 315 | 63.8 | C. abortus 15-58d44 | 96.96 | MT423469 |
| 740C | Carrion crow | 260 | 82.7 | C. abortus 15-58d44 | 100 | MT423470 |
| 740K | Carrion crow | 260 | 73.5 | C. abortus 15-58d44 | 100 | MT423471 |
| 744C | Carrion crow | 278 | 77.3 | C. abortus 15-58d44 | 100 | MT423472 |
| 746C | Carrion crow | 266 | 84.6 | C. abortus 15-58d44 | 100 | MT423473 |
| 750C | Carrion crow | 276 | 76.4 | C. abortus 15-58d44 | 100 | MT423474 |
| 750K | Carrion crow | 250 | 21.2 | C. abortus 15-58d44 | 98.40 | MT423475 |
| 751C | Carrion crow | 269 | 85.9 | C. abortus 15-58d44 | 100 | MT423476 |
| 751K | Carrion crow | 226 | 32.7 | C. abortus 15-58d44 | 100 | MT423477 |
| 752C | Carrion crow | 278 | 62.2 | C. abortus 15-58d44 | 100 | MT423478 |
| 752K | Carrion crow | 253 | 51.0 | C. abortus 15-58d44 | 100 | MT423479 |
| 753C | Carrion crow | 274 | 75.9 | C. abortus 15-58d44 | 100 | MT423480 |
| 754C | Carrion crow | 267 | 82.8 | C. abortus 15-58d44 | 100 | MT423481 |
| 756C | Carrion crow | 278 | 75.5 | C. abortus 15-58d44 | 100 | MT423482 |
| 756K | Carrion crow | 240 | 28.3 | C. abortus 15-58d44 | 99.17 | MT423483 |
| 759C | Carrion crow | 278 | 72.7 | C. abortus 15-58d44 | 100 | MT423484 |
| 760C | Carrion crow | 279 | 68.1 | C. abortus 15-58d44 | 100 | MT423485 |
| 760K | Carrion crow | 250 | 53.2 | C. abortus 15-58d44 | 100 | MT423486 |
| 761C | Carrion crow | 256 | 81.3 | C. abortus 15-58d44 | 100 | MT423487 |
| 764C | Carrion crow | 276 | 71.7 | C. abortus 15-58d44 | 100 | MT423488 |
| 765C | Carrion crow | 278 | 78.8 | C. abortus 15-58d44 | 100 | MT423489 |
| 769C | Carrion crow | 276 | 81.2 | C. abortus 15-58d44 | 100 | MT423490 |
| 770C | Carrion crow | 256 | 75.4 | C. abortus 15-58d44 | 100 | MT423491 |
| 772C | Carrion crow | 267 | 82.8 | C. abortus 15-58d44 | 100 | MT423492 |
| 772K | Carrion crow | 270 | 80.4 | C. abortus 15-58d44 | 100 | MT423493 |
| 773C | Carrion crow | 269 | 76.6 | C. abortus 15-58d44 | 100 | MT423494 |
| 774C | Carrion crow | 277 | 75.1 | C. abortus 15-58d44 | 100 | MT423495 |
| 797C | Carrion crow | 275 | 77.1 | C. abortus 15-58d44 | 100 | MT423496 |
| 797K | Carrion crow | 265 | 64.2 | C. abortus 15-58d44 | 100 | MT423497 |
| 798C | Carrion crow | 277 | 75.8 | C. abortus 15-58d44 | 100 | MT423498 |
| 798K | Carrion crow | 271 | 81.2 | C. abortus 15-58d44 | 100 | MT423499 |
| 814C | Carrion crow | 266 | 82.7 | C. abortus 15-58d44 | 100 | MT423500 |
| 814K | Carrion crow | 278 | 74.8 | C. abortus 15-58d44 | 100 | MT423501 |
| 826C | Carrion crow | 266 | 77.8 | C. abortus 15-58d44 | 100 | MT423502 |
| 846C | Carrion crow | 276 | 71.7 | C. abortus 15-58d44 | 100 | MT423503 |
| 847C | Carrion crow | 238 | 43.3 | C. abortus 15-58d44 | 99.58 | MT423504 |
| 848C | Carrion crow | 267 | 82.8 | C. abortus 15-58d44 | 100 | MT423505 |
| 850C | Carrion crow | 256 | 75.4 | C. abortus 15-58d44 | 100 | MT423506 |
| 850K | Carrion crow | 278 | 65.5 | C. abortus 15-58d44 | 100 | MT423507 |
| 851C | Carrion crow | 264 | 82.6 | C. abortus 15-58d44 | 100 | MT423508 |
| 856C | Carrion crow | 267 | 80.1 | C. abortus 15-58d44 | 100 | MT423509 |
| 858C | Carrion crow | 255 | 74.9 | C. abortus 15-58d44 | 100 | MT423510 |
| 858K | Carrion crow | 271 | 77.1 | C. abortus 15-58d44 | 100 | MT423511 |
| 861C | Carrion crow | 276 | 80.1 | C. abortus 15-58d44 | 100 | MT423512 |
| 861K | Carrion crow | 270 | 40.0 | C. abortus 15-58d44 | 99.63 | MT423513 |
| 972C | Carrion crow | 260 | 83.8 | C. abortus 15-58d44 | 100 | MT423514 |