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Oxford University Press - PMC COVID-19 Collection logoLink to Oxford University Press - PMC COVID-19 Collection
. 2020 Jul 21:btaa645. doi: 10.1093/bioinformatics/btaa645

COVID-19 Docking Server: A meta server for docking small molecules, peptides and antibodies against potential targets of COVID-19

Ren Kong b1,, Guangbo Yang b1, Rui Xue b1, Ming Liu b2, Feng Wang b3, Jianping Hu b4, Xiaoqiang Guo b4, Shan Chang b1,
Editor: Yann Ponty
PMCID: PMC7558834  PMID: 32692801

Abstract

Motivation

The coronavirus disease 2019 (COVID-19) caused by a new type of coronavirus has been emerging from China and led to thousands of death globally since December 2019. Despite many groups have engaged in studying the newly emerged virus and searching for the treatment of COVID-19, the understanding of the COVID-19 target-ligand interactions represents a key challenge. Herein, we introduce COVID-19 Docking Server, a web server that predicts the binding modes between COVID-19 targets and the ligands including small molecules, peptides and antibodies.

Results

Structures of proteins involved in the virus life cycle were collected or constructed based on the homologs of coronavirus, and prepared ready for docking. The meta platform provides a free and interactive tool for the prediction of COVID-19 target-ligand interactions and following drug discovery for COVID-19.

Availability

http://ncov.schanglab.org.cn

Supplementary information

btaa645_Supplementary_data

Supplementary data are available at Bioinformatics online.


Articles from Bioinformatics are provided here courtesy of Oxford University Press

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