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Supporting information
A-B) Density of sequenced piRNAs (blue: sense; red: antisense) across FB-element and BARI1.
(PDF)
A) Histogram showing the distribution of antisense and sense piRNA pairs of piRNAs mapping to transposons. B) The box-plots show the distribution of ping-pong ratios of each transposon. Each box-plot is a different biological replicate. The Ping-pong ratio of each transposon was calculated by taking the sum of piRNA reads in which sense piRNAs with a 10 nt A and antisense piRNAs with a 1nt U showing 10 nucleotide complementarity from the 5’ end and dividing it with the total number of piRNA reads.
(PDF)
A) Total library reads for each RNAseq library B) Principle component analysis of wild-type (n = 3 replicates) and klp10ARNAi (n = 3 replicates) RNAseq libraries. C) Scatter plot showing mean genic abundance of klp10ARNAi versus wild-type libraries.
(PDF)
Localization of acetylated MTs (acMTs) (red), Klp10A (green), and DNA (blue) in the apical region of a wild type testis (A), and in a telophase GSC-GB pair of a wild type testis (B). Arrows point to central spindle. Bars: 5 μm.
(PDF)
A-C) Same images as Fig 4A–4C and 4D–4F) same images as Fig 4E–4G are shown with additional α-Tubulin (blue) and DAPI (gray) channels to precisely define their cell cycle stages. Cytoplasmic α-Tubulin staining (without MT bundles of central spindle MTs) combined with decondensed DAPI staining indicate cells in G2 phase (A, D). Spindle α-Tubulin staining and condensed chromosomes indicate metaphase (B, E). Remnant of central spindle (by α-Tubulin staining) and decondensed chromosome indicate G1 phase (or S phase) of the cell cycle (completion of telophase) (C, F).
(PDF)
A) GFP-Piwi is nuclear in interphase GSCs/SGs in control testes. B) GFP-Piwi colocalizes with Vasa at the nuage of interphase GSCs/SGs in klp10ARNAi germ cells. Cytoplasmic Vasa and α-Tubulin staining as well as DAPI staining indicates that these cells are in interphase. GFP-Piwi (green), Vasa (magenta). Arrowhead points to nuage-localized Piwi in interphase klp10ARNAi GSCs/SGs. Bars 5μm. C) Number of interphase GSCs/SGs with nuage-localized Piwi per testis. n = 30 testes per genotype. p value of t-tests is provided.
(PDF)
Reference
- 1.Venkei ZG, Choi CP, Feng S, Chen C, Jacobsen SE, Kim JK, et al. (2020) A kinesin Klp10A mediates cell cycle-dependent shuttling of Piwi between nucleus and nuage. PLoS Genet 16(3): e1008648 10.1371/journal.pgen.1008648 [DOI] [PMC free article] [PubMed] [Google Scholar]
Associated Data
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Supplementary Materials
A-B) Density of sequenced piRNAs (blue: sense; red: antisense) across FB-element and BARI1.
(PDF)
A) Histogram showing the distribution of antisense and sense piRNA pairs of piRNAs mapping to transposons. B) The box-plots show the distribution of ping-pong ratios of each transposon. Each box-plot is a different biological replicate. The Ping-pong ratio of each transposon was calculated by taking the sum of piRNA reads in which sense piRNAs with a 10 nt A and antisense piRNAs with a 1nt U showing 10 nucleotide complementarity from the 5’ end and dividing it with the total number of piRNA reads.
(PDF)
A) Total library reads for each RNAseq library B) Principle component analysis of wild-type (n = 3 replicates) and klp10ARNAi (n = 3 replicates) RNAseq libraries. C) Scatter plot showing mean genic abundance of klp10ARNAi versus wild-type libraries.
(PDF)
Localization of acetylated MTs (acMTs) (red), Klp10A (green), and DNA (blue) in the apical region of a wild type testis (A), and in a telophase GSC-GB pair of a wild type testis (B). Arrows point to central spindle. Bars: 5 μm.
(PDF)
A-C) Same images as Fig 4A–4C and 4D–4F) same images as Fig 4E–4G are shown with additional α-Tubulin (blue) and DAPI (gray) channels to precisely define their cell cycle stages. Cytoplasmic α-Tubulin staining (without MT bundles of central spindle MTs) combined with decondensed DAPI staining indicate cells in G2 phase (A, D). Spindle α-Tubulin staining and condensed chromosomes indicate metaphase (B, E). Remnant of central spindle (by α-Tubulin staining) and decondensed chromosome indicate G1 phase (or S phase) of the cell cycle (completion of telophase) (C, F).
(PDF)
A) GFP-Piwi is nuclear in interphase GSCs/SGs in control testes. B) GFP-Piwi colocalizes with Vasa at the nuage of interphase GSCs/SGs in klp10ARNAi germ cells. Cytoplasmic Vasa and α-Tubulin staining as well as DAPI staining indicates that these cells are in interphase. GFP-Piwi (green), Vasa (magenta). Arrowhead points to nuage-localized Piwi in interphase klp10ARNAi GSCs/SGs. Bars 5μm. C) Number of interphase GSCs/SGs with nuage-localized Piwi per testis. n = 30 testes per genotype. p value of t-tests is provided.
(PDF)
