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. 2020 Nov 2;16(11):e1009120. doi: 10.1371/journal.pgen.1009120

A pair of ascending neurons in the subesophageal zone mediates aversive sensory inputs-evoked backward locomotion in Drosophila larvae

Natsuko Omamiuda-Ishikawa 1, Moeka Sakai 1, Kazuo Emoto 1,2,*
Editor: Peter Soba3
PMCID: PMC7605633  PMID: 33137117

Abstract

Animals typically avoid unwanted situations with stereotyped escape behavior. For instance, Drosophila larvae often escape from aversive stimuli to the head, such as mechanical stimuli and blue light irradiation, by backward locomotion. Responses to these aversive stimuli are mediated by a variety of sensory neurons including mechanosensory class III da (C3da) sensory neurons and blue-light responsive class IV da (C4da) sensory neurons and Bolwig’s organ (BO). How these distinct sensory pathways evoke backward locomotion at the circuit level is still incompletely understood. Here we show that a pair of cholinergic neurons in the subesophageal zone, designated AMBs, evoke robust backward locomotion upon optogenetic activation. Anatomical and functional analysis shows that AMBs act upstream of MDNs, the command-like neurons for backward locomotion. Further functional analysis indicates that AMBs preferentially convey aversive blue light information from C4da neurons to MDNs to elicit backward locomotion, whereas aversive information from BO converges on MDNs through AMB-independent pathways. We also found that, unlike in adult flies, MDNs are dispensable for the dead end-evoked backward locomotion in larvae. Our findings thus reveal the neural circuits by which two distinct blue light-sensing pathways converge on the command-like neurons to evoke robust backward locomotion, and suggest that distinct but partially redundant neural circuits including the command-like neurons might be utilized to drive backward locomotion in response to different sensory stimuli as well as in adults and larvae.

Author summary

In the absence of obstacles, most land animals typically walk forward; aversive cues trigger directional changes that prominently include backward movement. Changes in movement direction are evoked by command neurons in the brain that function on local motor circuits to control direction and timing of muscle movements. Drosophila MDNs in the brain act as command-like neurons to evoke the backward movement in adults and larvae, but sensory control of MDN activity is still incompletely understood. Here we identify a pair of ascending neurons, designated as AMBs, that can activate MDNs to elicit backward locomotion in larvae. We present data from functional imaging with optogenetics, anatomical analyses, and behavioral studies that support the idea that AMBs and MDNs are critical components of the neural circuits that transduce aversive stimuli from C4da sensory neurons into backward locomotor output. We further propose that divergent but partially overlapped circuits are recruited to evoke backward locomotion in response to distinct aversive stimuli as well as in adults and larvae. This study paves a way to understand circuit mechanisms of how multiple sensory inputs are coordinated to evoke particular behavior in response to a variety of external cues.

Introduction

Dynamic locomotion with steering control is critical for animals to avoid unwanted situations [13]. Animals generally walk forward but often switch to backward when sensing insurmountable obstacles or potentially dangerous stimuli in their path. As forward locomotion and backward locomotion are mutually exclusive, the selection of walking direction is necessary to prevent injury and escape predation. Thus animals often have dedicated control systems for backward locomotion [4,5]. In the fruit fly Drosophila melanogaster, for instance, backward walking relies on small subsets of dedicated neurons including the command-like Moonwalker Descending Neurons (MDNs), two pairs of descending neurons in the brain [6,7]. MDNs are required to walk back from dead ends [6] and to walk away from visual threat [8]. A recent study indicates that the TwoLumps ascending neurons mediate the touch-evoked backward walk through MDN activation in response to touch stimuli on the anterior legs [9]. MDNs also function in Drosophila larvae as well as adults to evoke backward locomotion in response to mechanical stimuli on the head [7]. Structural and functional studies indicated that larval MDNs promote backward locomotion through activating the backward specific premotor neurons and simultaneously suppressing forward premotor neurons through distinct postsynaptic partners [7], though sensory control of the larval backward locomotion remains elusive.

In addition to the mechanical stimuli on the head, larvae show backward locomotion when exposed to blue light [1013], a response that depends on two partially redundant sensory systems, the Bolwig’s organ (BO) and the class IV dendritic arborization (C4da) neurons [14]. BO consists of a pair of photoreceptor-containing visual organs located on the larval head which project their axons to the brain [1517], whereas C4da neurons are multimodal nociceptive neurons that cover the entire larval body wall and project axons to the ventral nerve cord (VNC) [1417]. Ablation of C4da neurons largely impairs larval responses toward noxious stimuli, whereas optogenetic activation of C4da induces multiple escape behavior including C-shape bending, rolling, and backward locomotion [14,1824]. Although recent studies have isolated multiple different neurons that act downstream of C4da sensory neurons to evoke rolling behavior [22,23,25,26], little is known about the circuits downstream of C4da neurons that control backward locomotion. Furthermore, how BO and C4da sensory circuits are integrated to evoke robust backward locomotion upon blue light stimuli remains largely unknown.

In this study, through a non-biased optogenetic screen, we identify a pair of neurons in the subesophageal zone (SEZ), designated as AMBs, that induce repetitive and intensive backward locomotion in larvae. Our structural and functional analysis suggests that AMBs function upstream of MDNs in order to elicit backward locomotion. Further behavioral and functional analysis shows that AMBs preferentially relay aversive stimuli from C4da neurons, but not from BO, to MDNs to trigger backward locomotion. We also found that, unlike in adult flies, MDNs are dispensable for the dead end-evoked backward locomotion in larvae. Our findings thus uncover neural circuits underlying blue light-triggered backward locomotion and suggest that distinct but partially redundant circuits mediate backward locomotion in response to different stimuli.

Results

A pair of ascending cholinergic neurons in SEZ can trigger backward locomotion

In order to systematically identify neurons involved in control of a specific type of escape behavior, backward locomotion, we conducted an optogenetic screen using the Janelia GAL4 collection together with UAS-CsChrimson [27,28] (see Materials and Methods for details). From 783 GAL4 lines screened, we identified three GAL4 lines whose activation triggered robust backward locomotion in third instar larvae (Fig 1A, S1 Fig, S2 Fig and S1 Movie). Prior studies identified the Moonwalker Descending Neurons (MDNs) as command neurons that trigger backward locomotion upon activation [7], therefore we examined whether any of our GAL4 lines label MDNs. We found that one of the three GAL4 lines, R73F04-GAL4, appeared to label MDNs based on the cell morphology and location in the brain. Indeed, dual labeling with R73F04-LexA and SS01613-GAL4 that labels MDNs [7] confirmed that the two pairs of descending neurons labeled by R73F04-GAL4 are identical to MDNs (S1 Fig).

Fig 1. AMBs are a pair of neurons in SEZ that can induce backward locomotion upon activation.

Fig 1

(A-D) Expression patterns of GAL4 lines. The yellow arrowheads indicate the somas of AMBs. Scale bar, 100 μm. Genotypes of each GAL line are shown in S1 Table. (E, F) The number of backward/forward waves in 10 seconds before (OFF) or during (ON) optogenetic activation with CsChrimson. Genotypes: w; UAS-CsChrimson/+; +/+ (Control); other four lines drive CsChrimson by GAL4 lines shown in (A-D). Control, n = 15; R60F09-GAL4, n = 10; R60F09-ACh-GAL4, n = 10; R60F09-Brain-GAL4, n = 8; AMB-GAL4, n = 19. In the boxplot, the width of the box represents the interquartile range and the dot represent outlier in the graph. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed statistical significance using the Wilcoxon rank sum test and corrected for multiple comparisons using the Holm method. ***p<0.001.

Since the other two GAL4 lines, R60F09-GAL4 and R73D06-GAL4, did not label MDNs, we reasoned that these lines would facilitate identification of new neurons involved in backward locomotion. To genetically define these neurons, we employed combinatorial expression of a variety of GAL80 and FLP drivers together with R60F09-GAL4 [2931]. Using these approaches, we subdivided R60F09-GAL4-positive neurons into distinct populations (Fig 1A–1C: see S1 Table for genotypes of each GAL4 lines and S2 Table for all the numerical data). Optogenetic activation of two of these populations labeled by R60F09-ACh-GAL4, but not neurons labeled by R60F09-Brain-GAL4, significantly increased the number of backward waves (Fig 1E and 1F). Since a pair of neurons in the subesophageal zone (SEZ) was observed in the R60F09-ACh-GAL4 population, but not in the R60F09-Brain-GAL4 population (Fig 1B arrowheads), we focused our later studies on these neurons as potential candidates responsible for backward locomotion, and designated these neurons as Ascending Moonwalker-like Backward neurons (AMBs).

To further examine whether AMBs are responsible for backward locomotion, we next checked whether AMBs were labeled by R73D06-GAL4 as well as R60F09-GAL4. Dual labeling with R60F09-LexA and R73D06-GAL4 indicated that AMBs in the SEZ are the only cells in the larval CNS co-expressing both drivers (S2 Fig). We took advantage of this restricted intersection to test the contribution of AMBs to backward locomotion induced by optogenetic stimulation of R73D06-GAL4-expressing cells. In larvae expressing LexAop-GAL80 with R60F09-LexA in addition to UAS-CsChrimson with R73D06-GAL4, backward responses as well as CsChrimson expression in AMBs were no longer observed on light application (S2 Fig), further indicating that AMB activation triggers backward locomotion. In addition to backward locomotion, optogenetic activation of R-73D06-GAL4 neurons evoked rolling behavior (S2 Fig). Unlike backward locomotion, rolling behavior was unaffected by R60F09-GAL80 (S2 Fig), suggesting that rolling behavior evoked by optogenetic activation of R-73D06-GAL4 neurons is mediated by other neurons rather than AMBs. Finally, we generated a splitGAL4 by combining R60F09-GAL4DBD and 11E07-p65AD, and confirmed that the split-GAL4 specifically labeled AMBs in the larval brain (Fig 1D) (hereafter, designated as AMB-GAL4). Optogenetic stimulation of AMB-GAL4-expressing cells induced significant backward locomotion (Fig 1E and 1F). Taken together, we concluded that AMBs trigger backward locomotion upon optogenetic activation.

To further characterize AMBs, we expressed the dendritic marker Denmark [32] and the presynaptic marker BrpD3::mCherry [33] in AMBs. Denmark labeled the somas and neurites from the SEZ to the T2 segment, whereas BrpD3::mCherry localized in the neurites projecting to the brain (Fig 2A and 2B), indicating that AMBs are ascending neurons that have dendritic arborizations in the SEZ to the T2 segment and extend axonal projections to the brain (Fig 2C). We also analyzed neurotransmitter expression in AMBs and found that AMBs were immunoreactive to the choline acetyltransferase (ChAT), but not to the vesicular glutamate transporter (VGlut) or GABA (Fig 3 and S3 Fig), indicating that AMBs are cholinergic neurons.

Fig 2. Anatomical characterizations of AMBs.

Fig 2

(A, B) The dendritic marker Denmark (A) or the presynaptic marker Brp::mCherry (B) were co-expressed with the membrane-localized GFP in AMBs. The area indicated by yellow dot square was magnified in the lower panels. Genotypes: w; UAS-mCD8GFP/VGlut-GAL80 [MI04979]; R60F09-GAL4/UAS-Denmark (A); w; UAS-mCD8GFP/VGlut-GAL80 [MI04979]; R60F09-GAL4/UAS-brpD3::mCherry (B). Scale bar, 20 μm. (C) A schematic anatomy of AMBs. The color of neurites indicate the soma and the dendritic arbors (blue) and presynaptic site in the axonal processes (magenta), respectively.

Fig 3. AMBs are immunoreactive to ChAT, but not to VGlut and GABA.

Fig 3

AMBs expressing membrane-localized GFP were immunostained by antibodies against three different neurotransmitter markers: (A) ChAT, (B) GABA, and (C) VGlut. Scale bars, 10 μm.

AMBs function upstream of MDNs

Given that activation of AMBs and MDNs triggers similar repetitive backward locomotion (S4 Fig), we reasoned that AMBs and MDNs might function in the same neuronal circuit to control backward locomotion. To test this possibility, we dual-labeled AMBs and MDNs using the GAL4/UAS and the LexA/LexAop binary expression systems, and found that AMB axons are closely apposed to MDN dendrites in the brain (Fig 4), implying that AMBs might function upstream of MDNs. To further test this possibility, we monitored synaptic GRASP (GFP reconstitution across synaptic partners) signal using the t-GRASP system, which relies on split-GFP fragments targeted to each side of the synapse [34,35]. Using this assay, we observed GFP signals in MDN dendrites at sites of AMB axon contacts in larvae expressing pre- and post-t-GRASP fragments in AMBs and MDNs, respectively (Fig 5B). In contrast, we detected no obvious GFP signal in larvae expressing only pre-t-GRASP fragments in AMBs (Fig 5D). These data suggest that AMB axons form contacts with MDN dendrites.

Fig 4. AMB axons are apposed to MDN dendrites in the larval brain.

Fig 4

(A-D) A schematic view of AMBs and MDNs from the dorsal (A) and from lateral side (C). The area with red boxes in (A) and (C) were shown in (B) and (D), respectively. Dual-labeling of AMBs (green) and MDNs (magenta). AMBs and MDNs were co-labeled with membrane-localized RFP and membrane-localized GFP, respectively. Genotypes: w; R60F09-LexA, tsh-GAL80/LexAop-rCD2RFP; R73F04-GAL4, Gad1-2A-GAL80/UAS-mCD8GFP. Scale bars, 10 μm.

Fig 5. GRASP analysis of physical contacts between AMBs and MDNs.

Fig 5

(A) A schematic view of t-GRASP between AMBs and MDNs. spGFPs located in each site of the synapse are reconstituted only when two membranes are close enough to make contacts. (B) GRASP signals between AMBs and MDNs were observed the area where AMB axons were co-localized with MND dendrites in the brain. (C) A schematic view of t-GRASP between AMBs and MDNs without expression of the post-t-GRASP fragment in MDNs. (D) No detectable GRASP signals were observed in the brain without expression of the post-t-GRASP fragment in MDNs. The yellow dot square in the upper row is magnified in the lower row. AMBs are labeled by anti-HA. Genotypes: w; R60F09-LexA/+; R73F04-GAL4, Gad1-2A-GAL80/UAS-post-t-GRASP, pre-t-GRASP. Scale bars, 20 μm.

Next, to investigate the functional connection between AMBs and MDNs, we performed calcium (Ca2+) imaging of MDNs upon AMB activation. To this end, we expressed CsChrimson in AMBs and the calcium sensor GCaMP6m in MDNs, and we monitored Ca2+ responses at MDN axons following optogenetic AMB stimulation (Fig 6A). In a semi-intact preparation of the larval CNS [22], red light application significantly increased GCaMP6m signal intensity in MDN axons (Fig 6; 4.97% ± 0.74% elevation of ΔF/F0 on average, n = 34). By contrast, the GCaMP6m intensity was largely unchanged in MDN axons of larvae not expressing CsChrimson in AMBs (Fig 6; 0.09% ± 0.60% elevation of ΔF/F0 on average, n = 24). These data indicate that AMB activation induces Ca2+ elevation in MDNs, supporting the idea that AMBs are functionally coupled to MDNs.

Fig 6. Optogenetic AMB activation causes Ca2+ responses in MDNs.

Fig 6

(A) A schematic view of AMBs and MDNs. The red box indicates the area observed in Ca2+ imaging. (B) Ca2+ imaging of MDNs upon optogenetic activation of AMBs in with (lower panels) or without CsChrimson (upper panels) conditions. Here are shown representative images of relative Ca2+ levels 5 seconds before (OFF) and after (ON) light application. Scale bars, 10μm. (C) Time series of calcium responses in MDN axons upon optogenetic AMB activation. Red light was applied during the period indicated by the red band. Larvae harboring CsChrimson, n = 24; Larvae without CsChrimson, n = 34; Data are shown as the mean ± SEM. Genotypes: w; UAS-GCaMP6m, tsh-GAL80/R60F09-LexA; R73F04-GAL4, Gad1-2A-GAL80/LexAop-CsChrimson (+CsChrimson); w; UAS-GCaMP6m, tsh-GAL80/+; R73F04-GAL4, Gad1-2A-GAL80/LexAop-CsChrimson (-CsChrimson). (D) Average of MDN ΔF/F0 values in 10 seconds before (OFF) or during (ON) optogenetic activation. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed statistical significance by Welch ‘s t test with Holm method. ***p < 0.001.

Finally, we asked whether MDNs might function downstream of AMBs to evoke backward locomotion. To test this possibility, we simultaneously activated AMBs with CsChrimson and silenced MDNs via expression of the tetanus neurotoxin light chain (TNT) (Fig 7A) [36]. Silencing MDNs significantly decreased the number of backward waves triggered by AMB activation compared with control (Fig 7D; effector control, 3 backward waves in the median, n = 17; MDN-ACh-GAL4 silencing, 1 backward wave in the median, n = 15), whereas silencing MDNs did not significantly affect the number of forward waves before AMB activation (Fig 7E; effector control, 3 forward waves in the median, n = 17; MDN-ACh-GAL4 silencing, 2 forward waves in the median, n = 15). Furthermore, behavioral ethograms of AMB activation (R60F09>CsChrimson) and AMB activation with MDN silencing (R60F09>CsChrimson, MDN-ACh>TNT) showed that silencing MDN preferentially attenuated backward locomotion evoked by optogenetic AMB activation, but not other behaviors including forward locomotion and bending (Fig 7F and 7G; R60F09>CsChrimson, percentage of time spent on bending 10 seconds after light stimulation onset 24.0% in the median, stop 21.0%, n = 17; R60F09>CsChrimson, MDN-ACh>TNT; bending 37.8%, stop 28.5%, n = 14). Thus, AMB activation triggers backward locomotion at least in part through MDN activity. Taken together, these data indicate that AMBs function upstream of MDNs to evoke backward locomotion.

Fig 7. AMBs require MDNs to evoke backward locomotion.

Fig 7

(A) A schematic view of optogenetic AMB activation with silencing MDNs. (B, C) Representative behavior ethograms upon optogenetic stimulation of AMB neurons. An animal expressing CsChrimson in AMBs was subjected to optogenetic activation for 30 seconds. Behavior events are color-coded: forward movement (grey), stop (white), bending (yellow), bending with backward locomotion (orange) and backward locomotion (red). Representative data from 10 different animals are shown for each genotype. (D-G) The number of backward/forward waves or percentage of time spent in a behavioral mode in 10 seconds before (OFF) and during (ON) optogenetic AMB activation with CsChrimson while silencing MDNs. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed the statistical significance by the Wilcoxon rank-sum test with the Holm method. *p < 0.05.

AMBs preferentially convey aversive information from C4da sensory neurons to MDNs to evoke backward locomotion

Given that AMBs are sufficient to trigger backward locomotion, we next performed silencing experiments to test whether AMBs are required for backward locomotion in response to sensory stimuli. Previous studies indicate that two different stimuli can evoke backward locomotion in larvae: mechanical stimuli [7] and blue light irradiation [13] on the head. We first confirmed that gentle mechanical touch using an eyelash probe induced significant backward locomotion in larvae (Fig 8 and S2 Movie). Next, we examined whether eyelash-triggered backward responses are predominantly mediated by the gentle touch-responsive class III da (C3da) mechanosensory neurons [13]. We genetically ablated C3da neurons by expressing the pro-apoptotic genes reaper (rpr) and head involution defective (hid) [3739] using the C3da neuron-labeling GAL4 drivers GAL419-12 and NompC-GAL4 [40] and found that eyelash-triggered backward responses were largely abolished by ablation of C3da neurons (Fig 8A; Effector control, 1 in the median, n = 15; GAL419-12 ablation, 0 in the median, n = 30; NompC-GAL4 ablation, 0 in the median, n = 30), but not by ablation of C4da neurons (Fig 8A; ppk-GAL4 ablation, 2 in the median, n = 15). Next, we tested the requirement of AMBs in the gentle touch-triggered backward responses. We silenced AMBs by expressing TNT using AMB-GAL4 and found no significant defects in gentle touch-triggered backward responses compared to control larvae (Fig 8B and S2 Movie; Effector control, 2 backward wave in the median, n = 21; AMB-GAL4 control, 2 backward wave in the median, n = 30; AMB-GAL4 silencing, 2 backward waves in the median, n = 30). By contrast, consistent with a previous report [7], silencing MDNs attenuated the backward response (Fig 8B and S2 Movie; MDN-FLP-GAL4 control, 1 backward wave in the median, n = 31; MDN-FLP-GAL4 silencing, 0 backward waves in the median, n = 37). These data suggest that AMBs are dispensable for the gentle touch-induced backward response.

Fig 8.

Fig 8

Gentle touch-induced backward waves are mediated by C3da and require MDN activity The number of backward waves in response to gentle touch with ablation of sensory neurons (A) or silencing AMBs or MDNs (B). Gentle touch was applied four times with 15 seconds intervals. Genotypes are shown in S1 Table. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point, which is less than 1.5 times the length of the box away from the box, and the dot represent the outlier. We assessed the statistical significance by the Wilcoxon rank-sum test with the Holm method. * p < 0.05, ** p < 0.01, *** p < 0.001.

Next, we tested whether AMBs and MDNs are required for blue light-triggered backward responses, as the requirement of AMBs as well as MDNs was not yet examined in this behavioral context. Previous studies suggested that two distinct sensory systems, the Bolwig’s organ (BO) and the class IV dendritic arborization (C4da) neurons, mediate blue light-sensing in larvae [11,14]. To examine the relative contribution of BO and C4da neurons to the blue light-induced backward response, we ablated each of them alone or in combination via expression of rpr and hid. We found that ablation of both BO and C4da neurons caused a significant reduction in the probability of animals exhibiting backward waves compared to the effector control, whereas the probability of animals exhibiting backward waves was unaffected by ablation of either BO or C4da neurons alone (Fig 9A; Effector control, 56.7%, n = 30; ppk-GAL4 ablation, 53.3%, n = 30; GMR-GAL4 ablation, 33.3%, n = 30; ppk-GAL4 + GMR-GAL4 ablation, 7.4%, n = 27). We also assessed whether C3da neurons could contribute to blue light-induced backward response by ablating C3da neurons or combination of C3da neurons and BO. We found no significant difference in the probability of backward crawling by ablation of either C3da neurons alone or combination of C3da neurons and BO (GAL419-12 ablation, 30%, n = 30; NompC-GAL4 ablation, 45.2%, n = 31; GAL419-12 + GMR-GAL4 ablation, 26.7%, n = 30; NompC-GAL4 + GMR-GAL4 ablation, 53.3%, n = 30). Thus, BO and C4da pathways, but not C3da, function redundantly to trigger blue light-triggered backward locomotion.

Fig 9. Blue light-induced backward waves are mediated by C4da and BO pathways and require MDN activity.

Fig 9

The probability of animals exhibiting backward waves upon blue light application with ablation of sensory neurons (A), or silencing AMBs or MDNs (B). Blue light was applied for 5 seconds. Genotypes are shown in S1 Table. We assessed the statistical significance by Fisher’s exact test with the Holm method. * p < 0.05, ** p < 0.01.

We next assayed the requirement for neuronal activity of AMBs and MDNs in blue light-triggered backward locomotion. To this end, we selectively expressed TNT in AMBs or MDNs and then induced blue light-induced locomotion. Compared with effector or GAL4 controls, silencing MDNs significantly decreased the probability of animals exhibiting backward responses in response to blue light stimulation (Fig 9B and S3 Movie; Effector control, 45.7%, n = 35; MDN-FLP-GAL4 control, 38.1%, n = 21; MDN-FLP-GAL4 silencing, 6.7%, n = 30). By contrast, silencing AMBs had no measurable effect on the probability of animals exhibiting backward responses (Fig 9B; AMB-GAL4 control, 33.3%, n = 30; AMB-GAL4 silencing, 43.3%, n = 30). These data indicate that MDNs, but not AMBs, are required to evoke backward locomotion upon blue light irradiation.

Given that BO and C4da pathways function redundantly to evoke backward locomotion upon blue light irradiation and that AMBs function upstream of MDNs, we reasoned that AMBs might preferentially relay information from either BO or C4da pathway to MDNs. To test this hypothesis, we attempted to activate either BO or C4da neurons optogenetically while simultaneously silencing either MDNs or AMBs with TNT. We first test whether optogenetic activation of either C4da neurons or BO could induce backward locomotion using R27H06-LexA and Rh6-LexA to drive specific expression of CsChrimson in C4da and BO neurons, respectively [22,41]. Optogenetic activation of C4da neurons induced multiple escape behaviors including bending, rolling, and backward locomotion (bending 100% of observed larvae, rolling 55.0%, backward locomotion 35.0%, n = 40). During optogenetic C4da activation for 30sec, rolling tended to be evoked in the earlier time (0–5 seconds) whereas backward locomotion was observed in the later time (5–30 seconds). Similarly, optogenetic activation of BO evoked bending and backward locomotion, but not rolling (bending 100% of observed larvae, backward locomotion 32.5%, n = 40).

Next, we assayed effects of MDN or AMB silencing on optogenetically induced backward locomotion. Silencing MDNs significantly decreased the probability of animals exhibiting backward locomotion induced by either C4da or BO activation (Fig 10; C4da activation with MDN-FLP-GAL4 silencing, 5.0%, n = 40; BO activation with MDN-FLP-GAL4 silencing, 7.5%, n = 40), consistent with a previous report that MDNs are command-like neurons for mechanosensory-evoked backward responses [7]. Silencing AMBs using two different GAL4 drivers, R60F09-ACh-GAL4 and R73D06-GAL4 (S2 Fig), similarly decreased the probability of animals exhibiting backward waves in response to activation of C4da neurons (Fig 10; C4da activation with R60F09-ACh-GAL4 silencing, 7.5%, n = 40; C4da activation with R73D06-GAL4 silencing, 7.1%, n = 42). However, backward responses induced by BO activation were largely unaffected by silencing AMBs (Fig 10; BO activation with R60F09-ACh-GAL4 silencing, 35.0%, n = 40; BO activation with R73D06-GAL4 silencing, 36.7%, n = 30). These data together suggest that AMBs preferentially mediate C4da-induced backward locomotion.

Fig 10. C4da neurons require AMBs and MDNs to evoke backward locomotion.

Fig 10

The probability of animals exhibiting backward waves during optogenetic activation of C4da neurons (A) or BO (B) for 30 seconds. Genotypes shown in SI Table. We evaluated statistical significance by Fisher’s exact test with the Holm method. **p<0.01, *p < 0.05.

Finally, in order to confirm the functional connection between AMBs and sensory organs, we asked whether activation of either BO or C4da neurons could trigger Ca2+ responses in AMBs. We expressed GCaMP6m in AMBs and CsChrimson in sensory neurons, and monitored Ca2+ responses in AMBs following BO or C4da activation. Optogenetic activation of C4da neurons, but not BO, resulted in a significant increase of GCaMP6m fluorescence intensity in AMB somas (Fig 11A–11D; +CsChrimson, 6.89% ± 1.46% elevation of ΔF/F0 on average, n = 37; -CsChrimson, 0.21% ± 1.09% elevation of ΔF/F0 on average, n = 16. Fig 11E–11H; +CsChrimson, 0.98% ± 1.71% elevation of ΔF/F0 on average, n = 23; -CsChrimson, 0.33% ± 0.86% elevation of ΔF/F0 on average, n = 22), consistent with the idea that AMBs receive inputs from C4da neurons, but not from BO. We further tested that AMBs indeed relay physiological blue light information from the C4da pathway. To this end, we expressed GCaMP6s in AMBs and irradiated blue lights to activate C4da pathway physiologically. We found that control larvae showed a significant increase in the fluorescence intensity in the AMB soma in response to blue light irradiation whereas no significant increase of the fluorescence intensity was observed in larvae ablated C4da neurons (S5 Fig; +rpr, 0.74% ± 2.23% elevation of ΔF/F0 on average, n = 43; -rpr, 7.40% ± 3.17% elevation of ΔF/F0 on average, n = 40). This data indicates that blue light irradiation activates AMB neurons via C4da neurons. Taken together, our data indicate that AMBs preferentially convey blue light information from C4da sensory neurons to MDNs to evoke backward locomotion.

Fig 11. Optogenetic activation of C4da neurons causes Ca2+ responses in AMBs.

Fig 11

(A, E) Schematic views of Ca2+ imaging on AMB’s soma during optogenetic activation of sensory neurons. Genotypes: w; UAS-GCaMP6m, tsh-GAL80/R27H06-LexA; R60F09-GAL4/LexAop-CsChrimson (+CsChrimson); w; UAS-GCaMP6m, tsh-GAL80/+; R60F09-GAL4/LexAop-CsChrimson (-CsChrimson) (A-D); w; GMR-GAL4/R60F09-LexA; UAS-CsChrimson/LexAop-GCaMP6m (+CsChrimson); w; R60F09-LexA/+; UAS-CsChrimson/LexAop-GCaMP6m (-CsChrimson) (E-H). (B, F) Ca2+ imaging of AMB neurons upon optogenetic activation of sensory neurons in +CsChrimson (lower panels) and -CsChrimson (upper panels) conditions. Here are shown representative images of relative Ca2+ levels 5 seconds before (OFF) and after (ON) light application. Scale bars, 10μm. (C, G) Time series of Ca2+ responses in the soma of AMBs upon optogenetic activation of sensory neurons. We applied stimulation in the period indicated by the red band. Data are shown as the mean ± SEM. (C) -CsChrimson, n = 16; +CsChrimson, n = 37. (G) -CsChrimson, n = 22; +CsChrimson, n = 23. (D, H) Average of AMB ΔF/F0 values in 10 seconds before (OFF) or during (ON) optogenetic activation. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed statistical significance by paired t-test for paired samples and Welch’s two sample t-test for unpaired samples. ***p < 0.001.

AMBs and MDNs are dispensable for dead end-induced backward locomotion in larvae

Previous reports indicate that MDNs are required for the dead end-evoked backward walking in adult flies [6,9]. We therefore examined whether MDNs and AMBs were similarly involved in the dead end-evoked backward responses in larvae using a narrow chamber that limits larval lateral and rotational movements. When effector control larvae encountered the end of the narrow chamber, they tried crawling forward several times and then changed their crawling direction by repeated backward locomotion (Fig 12 and S4 Movie). Compared to control larvae, silencing of either C3da or C4da and BO caused no obvious defect in the dead end-evoked backward locomotion (Fig 12A; Effector control, 5 in the median, n = 20; ppk-GAL4 ablation, 4 in the median, n = 20; GMR-GAL4 ablation, 6.5 in the median, n = 20; ppk-GAL4 + GMR-GAL4 ablation, 4.5 in the median, n = 20; GAL419-12 ablation, 7 in the median, n = 20; NompC-GAL4 ablation 4.5 in the median, n = 20). Similarly, no significant changes in backward locomotion upon reaching the dead ends were observed in larvae expressing TNT in AMBs or MDNs using AMB-GAL4 or MDN-FLP-GAL4, respectively (Fig 12B and S4 Movie; Effector control, 4 in the median, n = 20; AMB-GAL4 control, 3 in the median, n = 20; AMB-GAL4 silencing, 3 in the median, n = 20; MDN-FLP-GAL4 control, 4.5 in the median, n = 20; MDN-FLP-GAL4 silencing, 4.5 in the median, n = 20). These data suggest that, unlike in adult flies, MDNs are dispensable for the dead end-induced backward locomotion in larvae.

Fig 12. AMBs and MDNs are dispensable for dead ends-evoked backward waves in larvae.

Fig 12

The number of backward waves evoked by the dead ends with ablation of sensory neurons (A), or silencing AMBs or MDNs (B). The number of backward waves was counted for 1 min after an animal encounter the dead end in the chamber. Genotypes are shown in S1 Table. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed statistical significance by the Wilcoxon rank sum test with the Holm method.

Discussion

Command-like neurons for backward locomotion have been described in several animal species, including AVA neurons in C. elegans and MDNs in Drosophila [4,6,7], yet how they are activated by sensory inputs remains to be understood. In this study, we have identified a novel class of ascending interneurons, AMBs, that activate the command-like MDNs to elicit backward locomotion in Drosophila larvae. This notion is supported by the following lines of evidence. First, optogenetic activation of AMBs can induce backward locomotion similar to that induced by MDN activation (Fig 1 and S4 Fig). Second, AMB activation induces Ca2+ responses in MDNs, consistent with AMB functioning upstream of MDN (Fig 6). Third, AMB-induced backward locomotion is attenuated by silencing of MDNs (Fig 7). TEM-based connectome studies suggested that larval MDNs do not appear to have direct inputs from sensory neurons [7]; our studies suggest that AMBs relay inputs from sensory neurons to MDNs. Indeed, our dual labeling of AMBs and MDNs revealed that MDN dendrites are closely apposed to AMB axon terminals (Fig 4). Furthermore, t-GRASP data suggest that AMB axons likely have direct connections with MDN dendrites (Fig 5). Given that AMBs are cholinergic neurons (Fig 3), it is likely that AMBs are presynaptic neurons that provide excitatory inputs to MDNs (Fig 13). In addition to MDNs, AMBs might have other downstream neurons to induce backward locomotion, as substantial AMB-induced backward locomotion activity remained even in the larvae with silencing MDNs (Fig 7). Future studies using the TEM-based connectome analysis might lead to better understanding of how AMBs contribute to backward locomotion in coordination with other neurons including MDNs.

Fig 13. A circuit diagram of larval sensory systems and their potential downstream neurons that induce backward locomotion.

Fig 13

Black solid lines indicate the functional connections shown in the previous studies[7,14,40]. Red solid lines indicate the functional connections shown in this study. Black dashed lines indicate the functional connections implied in this study.

In theory, animals move backward when they encounter insurmountable obstacles or potentially aversive situations. Indeed, multiple aversive stimulations including mechanical stimulation and blue light irradiation on the head trigger backward locomotion in larvae. Our data suggest that different but partially redundant pathways act downstream of sensory neurons to induce backward locomotion in response to distinct sensory stimuli (Fig 13). Blue light-evoked escape behavior is typically mediated by BO and C4da neurons in larvae [14]. Our data suggest that aversive blue light information from BO and C4da are relayed by the AMB-independent and -dependent pathways, respectively and that both pathways eventually converge on MDNs to evoke backward locomotion (Figs 9, 10 and 13, S5 Fig). Although MDNs are previously shown to be required for backward locomotion in response to mechanical stimuli on the larval heads [7], it was unknown whether MDNs are also required to evoke backward locomotion in response to other aversive sensory modalities. Our data indicate that MDNs are indeed required for backward locomotion in response to aversive blue light irradiation as well as gentle touch (Figs 8 and 9). In larvae, gentle touch and blue lights are typically received by at least three different sensory systems, C3da neurons, BO, and C4da neurons [14,40]. We thus propose that MDNs are a convergence point for multiple aversive sensory inputs to trigger backward locomotion(Fig 13). It is of importance to examine whether other aversive sensory modalities, such as high temperature, high salt and bitter taste, might also require MDNs to evoke escape behavior including backward locomotion. It is also interesting to examine whether AMBs specifically mediate blue light information from C4da neurons or are also recruited by other aversive modalities.

Gentle touch-evoked backward locomotion was largely blocked by MDN silencing, but not by AMB silencing (Fig 8). Given that gentle touch on the head is predominantly mediated by C3da sensory neurons, C3da activity might evoke MDN activation through AMB-independent pathways (Fig 13). An alternative scenario is that, similar to the blue light-evoked backward locomotion, redundant circuits including the AMB-MDN pathway might function downstream of C3da neurons and they might eventually converge on MDNs (Fig 13). C3da neurons are reported to innervate multiple secondary neurons including DP-ilp7 neurons [26], DnB neurons [25], and Wave neuron [13]. In particular, anterior Wave neurons in the ventral nerve cord (VNC) act downstream of C3da/C4da sensory neurons to evoke backward locomotion in response to noxious mechanical stimulation while dispensable for blue light-evoked backward locomotion [13]. It is feasible to examine whether these C3da secondary neurons might function in the circuits that convey mechanical aversive signals from C3da neurons to MDNs.

Unlike mechanical stimuli and blue light irradiation on the head, the dead end-evoked backward locomotion appears to be independent of AMBs and MDNs, as no significant change in backward locomotion was observed by silencing either AMBs and MDNs (Figs 12 and 13). In addition, silencing of either C3da or C4da and BO caused no obvious defects in the dead ends-evoked backward locomotion (Fig 12). This is marked contrast to the backward walk in adult flies, as the dead end-evoked backward walk in adult flies largely depends on MDN activity [6]. It is most likely that adult flies receive mechanosensory information on the anterior legs when they encounter dead ends and that the sensory information inputs MDNs through TwoLumps neurons in VNC to evoke backward walking [9]. By contrast, larvae typically try to crawl forward repeatedly when they encounter the dead ends and subsequently switch to backward locomotion (S4 Movie). These observations imply that repeated mechanosensory inputs on the head as well as the anterior body wall might contribute to induction of backward locomotion. In addition, larvae might have a circuit mechanism to evoke backward locomotion independent of MDNs. Indeed, in the dissected larval VNC without the brain, optogenetic activation of anterior Wave neurons could induce backward Ca2+ waves in the motor circuits [13], suggesting that sensory inputs from anterior Wave neurons could evoke backward locomotion independently of the brain circuits including MDNs in larvae. Further studies in the cellular and network levels will be needed to understand how much similar and distinct neural circuits as well as sensory systems might be utilized in adult flies and larvae to evoke backward movements in a context dependent manner.

In summary, by the use of functional optogenetic and in vivo imaging techniques in the larval neural circuits, we have revealed circuits by which distinct sensory pathways converge on the command-like neurons to evoke backward locomotion. We also provide a possibility that distinct but partially redundant pathways function to evoke backward locomotion in adult and larvae as well as in response to different aversive stimuli. Given its relative simplicity, combined with the powerful genetic tools in Drosophila, further studies of circuit mechanisms of the backward locomotion will help to elucidate how multiple sensory inputs are coordinated in the cellular and circuit level to evoke particular behavior in response to a variety of external cues.

Materials and methods

Fly stocks

We used both male and female early third instar larvae (AEL 72–96 h) of Drosophila melanogaster in all experiments. We raised larvae on standard medium at 25°C in total darkness unless otherwise specified. We obtained fly stocks carrying w1118 (BL#3605), tub-GAL80ts[42] (BL#7017), tub-FRT-GAL80-FRT (BL#38880), UAS-TNT (BL#28838), UAS-CsChrimson (BL#55135, BL#55136), R27H06-LexA (BL#54751), R60F09-GAL4 (BL#39255), R60F09-LexA (BL#61576), R73D06-GAL4 (BL#46692), R73F04-GAL4 (BL#49623), R60F09-GAL4DBD (BL#75644), R11E07-p65AD (BL#68816), UAS-mCD8GFP (BL#5137), UAS-GCaMP6m (BL#42748), LexAop-CsChrimson (BL#82183), LexAop-GAL80 (BL#32215), LexAop-GCaMP6m (BL#44276), LexAop-GCaMP6s (BL#44590), UAS-mCD8RFP (BL#32229), LexAop-mCD8GFP (BL#32229), GMR-GAL4 (BL#1104), ppk-GAL4 [43, 44], NompC-GAL4 (BL#36369), UAS-post-t-GRASP and LexAop-pre-t-GRASP (BL#79039) and UAS-DenMark (BL#33061) from Bloomington Drosophila Stock Center. GAL419-12, repo-GAL80 from Jay Parrish (University of Washington); Rh6-LexA from Sandra Berger-Müller (Max Planck Institute of Neurobiology); UAS-rpr, UAS-hid from Douglas Allan (University of British Columbia); Otd-FLP from David Anderson (California Institute of Technology); tsh-GAL80 from Gero Miesenböck (University of Oxford); UAS-brpD3::mCherry from Takashi Suzuki (Tokyo Institute of Technology); LexAop-rCD2RFP from Tzumin Lee (Janelia Research Campus); SS01613-GAL4 from Chris Doe (University of Oregon). R73F04-LexA by cloning R73F04 from the genome of w1118 using the primers described in FlyLight (http://flweb.janelia.org/) into pENTR 1A (Thermo Fisher Scientific, A10462) and subsequently to pBPnlsLexA::p65Uw (Addgene, #26230) according to the previously described method [45]. We generated Gad1-2A-GAL80 using CRISPR/Cas9 system as described in the previous studies [46,47]. We inserted a transgene encoding the 2A peptide and GAL80 gene in front of the stop codon of the Gad1 gene with the following 20-bp guide RNA (gRNA) sequence: 5′-GCCTGGGCGACGACTTGTAA-3′. The engineered locus encodes a bicistronic transcript that produces Gad1 and GAL80 proteins, thereby allowing us to express GAL80 in the same spatiotemporal pattern as endogenous Gad1. In order to generate the split GAL4 line that specifically label AMBs (AMB-GAL4), we screened the Janelia p65AD lines that label SOG neurons by crossing with flies harboring UAS-CsChrimson and R60F09-GAL4DBD. Among ~50 lines screened, we finally defined R11E07-p65AD, as larvae harboring UAS-CsChrimson, R60F09-GAL4DBD, and R11E07-p65AD exhibited robust backward locomotion upon optogenetic activation. Indeed, we found specific labeling of AMBs in larvae harboring UAS-CsChrimson, R60F09-GAL4DBD, and R11E07-p65AD (Fig 1D).

Optogenetic screen

In order to systematically identify neurons that show a specific type of escape behavior upon activation, we designed an optogenetic screen in third instar Drosophila larvae. This screen used the Janelia collection of GAL4 lines [27], UAS-CsChrimson [28] and tsh-GAL80 [48,49] transgenes to express light-gated cation channels in arbitrary neurons locating in the brain or the SEZ. We first selected 783 GAL4 lines which label less than 20 neurons in the hemisphere brain. The larvae grew in standard medium containing 0.5 mM ATR at 25°C. We floated larvae using 20% sucrose, and then gently washed to collect them on an agarose plate. The behavioral experiment was conducted on a 1% agarose gel plate in a 9 cm plastic dish. We placed 15 larvae on the center of the plate for each trial and performed three trials for each genotype. For optogenetic activation, we applied 617 nm light (Thorlab, M617L4, 34.0 μW/mm2) for 5 minutes. We recorded the larval behavior with a CCD Camera (Thorlab, 1500M-GE) at a capture rate of 1 fps with infrared background illumination (CCS, LDR2-132IR940-LA), and classified the behavior phenotype manually.

Immunohistochemistry

We dissected early third instar larvae in phosphate buffered saline (PBS) and fixed them in 4% paraformaldehyde/PBS for 15 minutes at room temperature. For imaging without staining, we moved the larval CNS into 0.3% Triton X-100/PBS (PBT) and incubated 3 hours at 4°C after fixation. Then we moved the samples into VECTASHIELD mounting medium (Vector Laboratories, H-1000) and incubated 3 hours, and imaged with confocal microscopy (Leica TCS SP8). For imaging with immunohistochemistry, we moved the samples into PBT and incubate 30 minutes after fixation and blocked for 30 minutes in PBT containing 5% normal goat serum (NGS) at 4°C on a shaker. We subsequently incubated the samples with the primary antibody diluted in 5% NGS/PBT at 4°C overnight. After five times wash with PBT, we blocked samples for 30 minutes in 5% NGS/PBT. We subsequently incubated the samples with the secondary antibody diluted in 5% NGS/PBT at 4°C overnight. After five 10 minutes washes with PBT, we transferred the stained samples into VECTASHIELD for 3 hours at 4°C and imaged with confocal microscopy. The list of the antibodies used in this study and the dilution are as follows: anti-ChAT (mouse monoclonal; hybridoma bank 4B1; 1:50), anti-GABA (rabbit polyclonal; Sigma Aldrich #110M4781; 1:100), anti-VGlut (rabbit polyclonal; a gift from Hermann Aberle [50]; 2-DVl-lut-N-TRIM (N); 1:400), anti-mouse Alexa Fluor 635 (goat IgG; Molecular Probes, #A31575), and anti-rabbit Alexa Fluor 633 (goat IgG; Molecular Probes, #A21071).

Calcium imaging

Larvae were grown in the standard medium containing 0.5 mM all-trans-retinal (ATR; Sigma Aldrich, #R2500). Third instar larvae were pinned down on a silicon dish (Silpot 184, Dow Corning Toray), and dissected along the dorsal midline in calcium-free HL3.1 buffer (NaCl 70 mM, KCl 5 mM, MgCl2 4 mM, NaHCO3 10 mM, Trehalose 5 mM, Sucrose 115 mM, HEPES 5mM, pH 7.2 [51]). We removed the internal organs except for neural tissues. We imaged the CNS using an Olympus BX51WI microscope equipped with a spinning-disk confocal unit Yokogawa CSU10 (Yokogawa) and an EM-CCD digital camera (Evolve, Photometrics). For activation of neurons expressing CsChrimson, we applied 615 nm light (105 μW/mm2) with a pE-100 device (CoolLED). For activation of blue light-sensitive neurons physiologically, we applied 475 nm light (208 μW/mm2) with a pE-300ultra device (CoolLED). We quantified calcium probe signals using Fiji (Fiji is just ImageJ) and R (ver 3.2.2) We set ROIs on the neurites of MDNs or the soma of AMBs, and calculated mean signal intensity within each ROI using Fiji. We measured the raw signal intensity F and calculated F0 as the mean fluorescent signals from 0 to 10 seconds before the onset of optogenetic stimulation, and treated it as a baseline. Then we calculated the normalized calcium transient in each ROI according to the formula ΔF/F = (F–F0) /F0 using R. We calculated mean ΔF/F in ON or OFF state as the mean of ΔF/F in 10 seconds after or before the onset of optogenetic stimulation.

Optogenetics in free-moving larvae

Larvae were grown in standard medium containing 0.5 mM ATR at 25°C except for the R60F09-Brain experiments in Fig 1. For R60F9-Brain, we grew larvae 3 days at 18°C and 1 day at 29°C. We floated larvae using 20% sucrose, and then gently washed to collect them on an agarose plate. The behavioral experiment was conducted on a 1% agarose S gel plate (Wako, #13–90231) in a 90 mm plastic dish. We placed one larva on the center of the plate at one trial. For optogenetic activation, we applied 30 seconds of 640 nm light (Lumencor Spectra X7, 93.3 μW/mm2 for Figs 1 and 10 and S2 Fig; 2.84 μW/mm2 for Fig 7) for CsChrimson activation. We recorded the larval behavior with a sCMOS-Camera (Andor, Zyla 5.5) at frame rate of 20 fps under a stereomicroscope (Olympus, MVX10) with infrared background illumination (CCS, LDR2-132IR850-LA).

Blue light assay

We prepared the larvae and equipment in the same way as optogenetics assay above. For stimulation, we applied 440 nm spotlight (0.5 cm, 245 μW/mm2, Lumencor Spectra X7) to the larvae on the agarose plate for five seconds. We targeted the light application to the anterior half of the larval body in order to minimize the variance of the stimulation. If the light did not cover the anterior half of the body, we excluded the trial from the analysis. We performed one trial for each animal.

Gentle touch assay

We prepared the larvae and equipment in the same way as described in the blue light assay above. As a stimulus, we used an eyelash hair that was glued to the end of a pipette tip which could apply a force in the range of 1–10 μN. We stroked the animal four times with intervals of 15 seconds in 1 minute for one trial. We performed one trial for each animal.

Dead end assay

We prepared the larvae and equipment in the same way as described in the blue light assay above. We cut the terminal 1cm segment off of a 200 μl pipette tip (WATSON) and heat-sealed the tip to make a “dead-end” chamber that limits larval lateral and rotational movement. We introduced an individual larva into the chamber and waited until it physically encountered the end of the narrow chamber. We started recording for 1 minute from their encountering the dead end. When the larva failed to reach the dead end within 1 minute from the entry to the tip, we excluded the trial from the analysis. We performed one trial for each animal.

Behavioral analysis

We quantified larval forward/backward waves manually. We counted larval waves when larvae showed a sequence of muscle contractions across segments directed from anterior to posterior (backward) or posterior to anterior (forward). For making behavior ethograms and calculating time spent in a behavioral mode, we utilized FIMTrack to track larval behavior. We picked up “go state” and “bending state” among the parameters calculated by the software. We defined “forward” as the state in which “go state” is on and backward waves have not occurred, “backward” as the state in which “go state” is on and backward waves have occurred, “backward bend” as the state in which “bending state” is on and backward waves have occurred, “bend” as the state where either right or left “bending state” is on, “stop” as the state where both “go state” and “bending state” are off.

Statistical analysis

We evaluated statistical significance using the Wilcoxon rank sum test, Fisher’s exact test or Welch’s t test. Asterisks denote statistical significance: *** p < 0.001; ** p < 0.01; * p < 0.05; n.s., not significant. Error bars represent standard errors of the mean (SEM). All of the statistical analysis were performed by R version 3.3.2. We did not use any methods to determine whether the data met assumptions of the statistical approach.

Data and software availability

The datasets generated and/or analyzed during the study are available from the corresponding author on reasonable request.

Supporting information

S1 Fig. R73F04-GAL4 labels MDNs.

(A) Expression pattern of MDN-labeling GAL4 used in this study. The yellow arrowheads indicate the soma of MDNs. Genotypes: w; UAS-mCD8GFP, tsh-GAL80/+; R73F04-GAL4/+(R73F04-GAL4); w; UAS-mCD8GFP, tsh-GAL80/+; R73F04-GAL4, Gad1-2A-GAL80/+ (MDN-ACh); w; UAS-mCD8GFP/Otd-FLP, tub-FRT-GAL80-FRT; R73F04-GAL4, Gad1-2A-GAL80/+ (MDN-FLP). Scale bar, 100 μm. (B) Dual-labeling with MDN-labeling GAL4 used in the previous study [7] and R73F04-LexA. The yellow dot square in the upper row indicates the area shown in the lower row. The yellow arrowheads indicate both R73F04-LexA and SS01613-GAL4 label the soma of MDNs. Scale bar, 50 μm.

(TIF)

S2 Fig

Two distinct GAL4 lines label AMBs (A) Expression patterns of R60F09-LexA in the third instar larval CNS. The yellow arrowheads indicate the soma of AMBs. Maximum intensity projection of the entire CNS shown. Genotypes: LexAop-mCD8GFP, UAS-mCD8RFP/+; R60F09-LexA/+; +/+. Scale bar, 100 μm. (B, C) The number of backward/forward waves in 10 seconds before (OFF) or during (ON) optogenetic activation with CsChrimson. n = 15 for each genotype. We assessed statistical significance by the Wilcoxon rank sum test with Holm method. ***p < 0.001. (D) R60F09-LexA and R73D06-GAL4 co-label AMBs. The yellow dot square indicates the area shown in the lower row. The yellow arrowheads indicate the somas of AMBs. Genotypes: LexAop-mCD8GFP, UAS-mCD8RFP/+; R60F09-LexA/+; R73D06-GAL4/+. Scale bars, 50 μm. (E) GAL80 labeled by R60F09-LexA diminishes CsChrimson expression in AMBs labeled by R73D06-GAL4 co-labeling. The yellow arrowheads indicate the somas of AMBs. Genotypes: w; LexAop-rCD2RFP/R60F09-LexA, tsh-GAL80; R73D06-GAL4/UAS-CsChrimson (the upper row), w; LexAop-rCD2RFP/R60F09-LexA, tsh-GAL80; R73D06-GAL4/UAS-CsChrimson, LexAop-GAL80 (the lower row). Scale bars, 50 μm. (F, G) The number of backward/forward waves in 10 seconds before (OFF) or during (ON) optogenetic activation with CsChrimson. n = 18, 20 for each genotype. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed statistical significance by the Wilcoxon rank sum test with Holm method. ***p < 0.001. (H) Probability of animals showing rolling behavior in 10 seconds before (OFF) or during (ON) optogenetic activation with CsChrimson. We assessed statistical significance by the Fisher’s exact test.

(TIF)

S3 Fig. Positive and negative controls for anti-ChAT immunohistochemistry.

(A) Positive control for anti-ChAT. Anti-ChAT stained MDN somas that are reported to be cholinergic neurons in the previous study [7]. (B) Negative control of 2nd antibodies for immunohistochemistry. No detectable immunostaining was observed in the AMB somas without anti-ChAT antibody. Scale bars, 10 μm.

(TIF)

S4 Fig. Optogenetic activation of AMBs or MDNs triggers similar repetitive backward locomotion.

(A) Behavior events are color-coded: forward movement (grey), stop (white), bending (yellow), bending with backward locomotion (orange), and backward locomotion (red). (B-D) Behavior ethograms upon optogenetic stimulation of AMBs or MDNs. An animal expressing CsChrimson in either population was subjected to optogenetic activation for 30 seconds. Representative data from 10 different animals are shown for each genotype. (E-H) The number of backward/forward waves or percentage of time spent in a behavioral mode in 10 seconds before (OFF) and during (ON) optogenetic AMB activation with CsChrimson while silencing MDNs. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed the statistical significance by the Wilcoxon rank-sum test with the Holm method. ***p < 0.001.

(TIF)

S5 Fig. Blue light irradiation evokes Ca2+ responses in AMBs via C4da neurons.

(A) A schematic view of Ca2+ imaging on AMB’s soma while ablating C4da neurons. Genotypes: UAS-rpr/+; R60F09-LexA, LexAop-GCaMP6s; ppk-GAL4/+ (+rpr); UAS-rpr/+; R60F09-LexA, LexAop-GCaMP6s; +/+ (-rpr). (B) Time series of Ca2+ responses in the soma of AMBs upon blue light irradiation. We applied stimulation in the period indicated by the blue band. Data are shown as the mean ± SEM. -rpr, n = 40; +rpr, n = 43. (C) Average of AMB ΔF/F0 values in 5 seconds before (OFF) or last 5 seconds during (ON) optogenetic activation. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed statistical significance by paired t test for paired samples and Welch’s two sample t-test for unpaired samples. **p < 0.01.

(TIF)

S1 Movie. Activation of AMBs or MDNs evokes backward locomotion.

The movie shows the response of effector control, AMB > CsChrimson, and MDN-FLP > CsChrimson larvae before and after optogenetic activation of the neurons. The movie is played at 2 times speed.

(MP4)

S2 Movie. Application of gentle touch evokes backward locomotion.

The movie shows the response of effector control, AMB > TNT, and MDN-FLP > TNT larvae toward gentle touch by an eyelash.

(MP4)

S3 Movie. Application of a blue light spot evokes backward locomotion.

The movie shows the response of effector control, AMB > TNT, and MDN-FLP > TNT larvae upon 5 seconds of blue light stimulation. The white circle in the movie indicates the area of a blue light spot.

(MP4)

S4 Movie. Dead ends evoke backward locomotion.

The movie shows the behavior of effector control, AMB > TNT, and MDN-FLP > TNT larvae in the dead-end narrow chamber. All the larvae shown here are headed to left side.

(MP4)

S1 Table. Genotypes of GAL4 lines utilized in Fig 1.

(XLSX)

S2 Table. Numerical data and statistical analysis used in this study.

(XLSX)

Acknowledgments

We would like to thank C. Doe, D. Anderson, D. Allan, G. Miesenböck, H. Herranz, P. Soba, S. Berger-Müller, T. Suzuki, T. Lee, Bloomington Stock Center for reagents; FIM-Team for helping data analysis; S. Kondo for helpful advice in vector construction; the members of Emoto lab for critical comments and discussion; M. Miyahara and H. Itoh for technical assistance; J. Parrish for critical reading and comments; the Graduate Program for Leaders in Life Innovation (GPLLI) for supporting N.O-I.

Data Availability

All relevant data are within the manuscript and its Supporting Information files.

Funding Statement

This work is funded by MEXT Grants-in-Aid for Scientific Research on Innovative Areas ‘‘Dynamic regulation of brain function by Scrap & Build system’’ (KAKENHI 16H06456), JSPS (KAKENHI 16H02504), WPI-IRCN, AMED-CREST (JP18gm0610014), JST-CREST, the Strategic Research Program for Brain Sciences, Toray Foundation, Naito Foundation, Takeda Science Foundation, and Uehara Memorial Foundation to K.E; by JSPS fellowship (KAKENHI 19J10763) to N.O.I. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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Decision Letter 0

Gregory S Barsh, Peter Soba

12 May 2020

Dear Kazuo,

Thank you very much for submitting your Research Article entitled 'A pair of ascending neurons in the subesophageal zone mediates aversive sensory inputs-evoked backward locomotion in Drosophila larvae' to PLOS Genetics. Thank you, also, for your patience in these times of international crisis, which unfortunately affects us all in our reviewing and editing activities.

Your paper was reviewed by three experts, which all agreed that the submitted work is of high interest and technical quality. However, they also raised substantial concerns that need to be addressed. In particular, two referees raised major points whether mechanical touch or light are indeed activating AMB neurons. As pointed out by the reviewers, the current data does not fully support the presented model in Fig. 13. This should ideally be addressed experimentally and should take into consideration previous work, e.g. that class IV da neuron-dependent harsh touch on the head also induces backward locomotion (Takagi et al. Neuron 2017).

In general, figure labeling and presentation should also be adjusted as proposed by the reviewers to make the data more accessible and appreciable, e.g. adjustment of brightness of immunohistochemical signals.

Based on the reviews, we will not be able to accept this version of the manuscript, but we would be willing to review again a much-revised version. We cannot, of course, promise publication at that time.

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We hope that you find the reviewers’ comments helpful in preparing your revised manuscript.

Yours sincerely,

Peter Soba, Ph.D.

Guest Editor

PLOS Genetics

Gregory Barsh

Editor-in-Chief

PLOS Genetics

Comments to the Authors:

Please note here if the review is uploaded as an attachment.

Reviewer #1: In this study the authors identify the sensory circuitry that input to the command neuron for backward movement in Drosophila larvae. Through an optogenetic screen of a collection of GAL4 lines, the authors found that the activation of a pair of neurons in the subesophageal zone, termed AMBs, elicit backward crawling in larvae. They then carefully analyzed the pre- and post-synaptic partners of AMBs, and discovered that AMBs referentially pass sensory inputs from the C4da nociceptors to the command neurons for backward locomotion. Interestingly, this sensory pathway is different from that for backward locomotion elicited by the light-sensing Bolwig’s organ, which does not involve AMBs.

Recent studies have identified the MDNs as the command neurons for backward movement in adult and larval Drosophila. However, how sensory inputs are conveyed to MDNs is unknown. This study fills this gap and is thus an importance contribution to the understanding of sensory processing of aversive cues that elicit backward movements.

The authors applied a battery of approaches in this solid study, including genetic manipulations, t-GRASP, calcium imaging and behavioral analyses. Their savvy use of genetic tricks for identifying and confirming neurons is impressive. Overall, this is an excellent work.

Major concerns:

1) Fig. 9A shows that ablation of either C3da (GAL4[19-12]) or BO (GMR-GAL4), but not that of C4da, reduced backward locomotion elicited by blue light, indicating a possible involvement of C3da and BO. The ablation of a combination of C4da and BO dramatically reduced backward locomotion. I wonder what would happen if they ablate a combination of C3da and BO. This result is important for the model shown in Fig. 13. The authors may also want to perform Ca2+ imaging to determine whether stimulation of C3da activates AMBs.

2) Brp signals shown in Fig. 2B is so dim that it is hard to see them in the upper panel (the low magnification image). Moreover, it would be more convincing if an image showing the lack of (or much less) Brp signals in dendrites is presented for comparison.

3) Fig.3: need negative and positive controls of the immunostaining.

Minor concerns:

1) What are the criteria for selecting the 783 GAL4 lines for the optogenetic screen? Such information is important for readers to assess the scope of the screen.

2) Explain in the legends for Figure 1 what “OFF” and “ON” mean. Also, indicate what the black dots in the box plots mean (outliers?).

3) Fig 6D, 11D&H: avoid bar charts as they do not show data distribution. Use dot plots or box plots, instead.

4) Page 10, “We genetically ablated C3da neurons by expressing the pro-apoptotic genes reaper (rpr) and head involution defective (hid) using the C3da neuron-specific GAL4 drivers

GAL419-12 and NompC-GAL4”. NompC-GAL4 is also expressed in chordotonal neurons.

5) S1 Table (Genotypes of GAL4 lines utilized in Fig 1.): The rationale for including tub-GAL80ts in the flies for cell-type-specific manipulation of neurons for optogenetic experiments is not explained.

Reviewer #2: In this manuscript, the authors present a thorough analysis of neural circuit elements that mediate aversive stimuli-evoked backward locomotion. They focus in particular on a group of ascending neurons, which they named AMBs. They show that optogenetic activation of AMB neurons is sufficient to trigger backward locomotion. They demonstrate that AMB neurons are upstream of the previously defined backward locomotion triggering MDN descending neurons by successfully combining state-of-the art genetic labeling techniques with optogenetic activation and functional imaging experiments. The functional epistasis experiments are carefully performed to reveal that AMBs evokes backward locomotion -at least partially- through MDN neurons. The authors perform a set of ablation/silencing experiments to show that c4da and AMB neurons are dispensable for gentle touch evoked backward locomotion. Then, they show that Bolwig Organs (BOs) and c4da neurons are redundant for blue light irradiation-evoked backward locomotion. They perform (1) critical functional epistasis experiments and; (2) calcium imaging of AMB neurons combined with optogenetic activation of either c4dA or BO neurons to demonstrate that AMB neurons mediate blue light irradiation-evoked backward locomotion by receiving inputs from c4da neurons but not from BOs. They present convincing evidence that MDNs are necessary for both gentle-touch evoked and blue light irradiation-evoked backward crawling. The authors also demonstrate that AMBs and MDNs are dispensable for dead end induced backward locomotion. The manuscript goes beyond the previous findings showing that MDN triggers backward locomotion by dissecting how different sensory stimuli can mediate backward locomotion through MDN-dependent and independent pathways in the Drosophila larva. The findings further highlight that (1) Drosophila larvae utilize partially redundant neural elements to mediate blue light irradiation-evoked backward crawling and (2) distinct aversive sensory modalities can utilize divergent neural pathways to mediate backward locomotion. These findings will be of wide interest as they form the basis to dissect how multiple sensory inputs are integrated to coordinate escape behavior in complex sensory environments. The manuscript elegantly makes use of a range of currently available neurogenetic and opto-physiology tools to perform complex circuit analysis.

Major points:

1- Figure 11A-D shows that AMB neurons respond to C4dA activation. As C4dA neurons are multimodal, this finding does not mean that AMB neurons respond to blue light. The authors should demonstrate that AMB neurons respond to blue light irradiation.

2- In Figure 1E and F authors show how the number of backward and forward waves are affected upon AMB activation and Figure S1B-D show the related ethograms. A detailed analysis of the kinematic variables such as translational velocity and head angular speed before, during and after the stimuli would be a good addition to assess the behavioral phenotype induced by AMB activation in more detail. The authors should also present how other behavioral modes such as head casts and turns are affected upon AMB activation to understand whether AMB activation is specifically involved in backward locomotion.

3- The activation phenotypes of AMBs and MDNs with are represented with ethograms. A detailed analysis of kinematic variables (i.e. angular velocity and translational velocity) with quantification of behavioral states (duration/distance of forward runs and backward crawling, probability of stopping and reorientation) would reveal possible differences between AMB and MDN activation phenotypes.

Minor points:

1- The authors should present the previous findings on the Wave neurons described by Takagi et al. in the introduction part with more detail since they can also trigger backward locomotion in response to mechanical stimulus to the anterior part of the larva.

2- The authors should show the expression pattern of 73D06-Gal4>Chrimson; 60F09-lexA>lexAOp-Gal80 in Figure S2 because lexAOp-Gal80 expression pattern might not recapitulate the expression pattern of lexAOp-mCD8GFP.

3- In Figure S2F, the number of forward waves are significantly reduced even upon Gal80 expression. What is the behavioral phenotype observed in these larvae? The authors should present a video or quantification of other behavioral parameters to explain this observation. The authors should also discuss whether this is due to the expression of CsChrimson in neurons that are not covered by lexAOp-Gal80 (see previous comment).

4- Previous studies suggest that MDNs inhibit forward locomotion by activating an SEZ descending neuron (Carreira-Rosario et al., 2018, Tastekin et al., 2018). Interestingly, the ethogram in Figure S3D shows that MDN-Flp>CsChrimson activation lead to a direct switch from forward runs to backward locomotion. Quantification of wave propagations would contribute to the mechanistic insight of how AMB-induced backward waves are generated by showing whether forward locomotor waves are inhibited without reaching the most anterior segments or backward locomotor waves start after finishing the forward waves.

5- In Figure 7C, AMB activation upon MDN silencing is still able to suppress the forward locomotion raising the question whether AMBs are involved in the inhibition of forward locomotion through previous defined SEZ descending neuron (or other neurons) in an MDN-independent manner. The authors should perform similar functional epistasis and optogenetic activation-functional imaging experiments with AMB and Pair 1/SEZ-DN1 neurons (Carreira-Rosario et al., 2018, Tastekin et al., 2018) to test this possibility.

6- The authors should quantify other behavioral modes such as stopping and turning presented in the ethograms in Figure 7D and E to compare AMB activation alone to AMB activation with MDN silencing.

7- On page 14 wrong reference. “…Previous studies indicate that two different stimuli can evoke backward locomotion in larvae: mechanical stimuli [14] and blue light irradiation [24] on the head…” Reference 24 does not show that blue light irradiation can evoke backward locomotion.

8- Supplementary Videos (except Supplementary Video 1) are mislabeled.

9- On page 14, “…Next, we examined whether eyelash-triggered backward responses are predominantly mediated by the gentle touch-responsive class III da (C3da) mechanosensory neurons…”. The authors should cite Takagi et al., 2017 who showed that C3da are gentle touch responsive.

10- On page 14, the authors should cite Yan et al., 2012 who showed NoMPC-Gal4 labels C3da.

11- The data that show AMBs are dispensable for gentle touch-evoked backward locomotion is convincing. However, AMBs can still receive inputs from C3da neurons, which could be important for the integration of multisensory aversive inputs (Ohyama et al., 2015). The authors could test this by measuring AMB responses upon C3da activation.

12- Although not statistically significant, ablating C3da neurons also lead to a decrease in the probability of backward locomotion upon blue light irradiation. Xiang et al, 2010 have shown that blue light does not evoke activity in C3da neurons. This leads to the question whether the decrease in backward crawling is due to lack of some proprioceptive feedback which might be provided by C3da neurons. The authors should address whether uncoordinated backward locomotion, which might highlight a proprioceptive defect takes place in C3da ablated larvae.

13- The authors quantify the number of backward waves in gentle touch experiments whereas they quantify the probability of backward locomotion in blue light irradiation experiments. The authors should justify the use of different metrics to quantify backward locomotion in these experiments.

14- On page 18. The reader is referred to S6 Movie but there is no S6 Movie in the supplementary data.

15- In figure legends: Wilcox rank sum > Wilcoxon rank sum.

16- Whenever a boxplot is presented, what box boundaries and whiskers represent should be stated.

17- On page 21, “…Gentle touch-evoked backward locomotion was largely blocked by MDN

silencing, but not by AMB silencing (Fig 9)…” Fig 9 should be Fig 8.

Reviewer #3: The authors in this paper address an exciting key question that directly follows from recent work in the field. The authors ask what are the upstream neural networks that relay sensory cues to Mooncrawler Descending Neurons (MDNs) in Drosophila larvae? Previous work found that MDNs have command-like ability to induce backward locomotion and key downstream components of MDN containing circuits had been characterized (Carreira-Rosario et al., 2018). More recently, in adult Drosophila adults, ascending neurons (TwoLumps) was discovered to mediate touch-evoked backward walk through MDN activation in response to touch stimuli on anterior legs (Sen et al., 2019). Understanding what mediates sensory cues through MDNs in Drosophila larvae advances our overall understanding behind the structure of a motor circuit that has been shown to retain key neural components (MDNs) between the larvae and adulthood. The author’s key finding is the discovery of a pair of ascending neurons, AMBs, and convincingly show that AMBs are upstream of MDNs and mediate blue light-evoked backward movement through MDN activation in response to stimulation of C4da sensory neurons. In addition, the author’s nicely showed that the Bolwig’s organ do not connect to the MDNs via the AMBs. The authors also find that C3da sensory neurons are upstream to MDNs but do not show if these neurons are upstream to AMBs. Both of these findings are intriguing and will certainly prompt future studies. Overall, the work presented in this study is convincing, novel, and advances the field, making this paper worthy of publication in PLOS Genetics.

Comments:

At the end of this paper, the authors investigate the role MDNs or any of the upstream neurons identified in this paper are indispensable for dead end-evoked backward movement in larvae. Previous work found MDNs were required for this response in adults. The authors find that MDNs are dispensable for this behavior in larvae. When watching the video of a larvae in a dead-end environment, it appears as though the larvae is scrunched up and then recoils. Potentially this spring-like action drives backward movement. Since adult fly bodies are very different than larval bodies, it isn’t necessarily surprising that different circuits control backward movement in response to this stimuli. It is unclear why the authors included this finding in this paper. Since these findings are not central to the paper, the authors should think about removing this work and saving it for a future publication investigating the neural networks underlying dead end-evoked backward movement in larvae.

ATR controls are commonly used in the field yet the researchers did not, is there a clear rationale behind omitting this standard control?

In the main text, the paragraph that starts on page 12 describes optogenetic activation experiments but no figure reference is given. Could the authors link this text to a figure?

The Figures are not easily accessible to readers outside the field. Please find specific examples below where the authors could make their Figures more accessible.

1) Fluorescence in images could be brighter, see Figure 2. Image brightness can be adjusted in FIJI.

2) While some of the Figures are nicely labeled (Figure 1-5), later figures have poorly labeled schematics and genotype names. For example, in Figure 8, there is a lovely schematic but it isn’t clear what is happening. If there was a header “gentle mechanical touch” and the eyelash probe was labeled, that would greatly aid the reader. Glancing at Figure 8A, unless readers know what ppk, 19-12, and NompC are, it isn’t obvious that these are drivers expressed in either C4da or C3da sensory neurons. Also rpr hid and TNT labels could additionally have a single word describing what is happening –‘ablation’, ‘silencing’. In Figure B, the only GAL4 line that doesn’t need to be searched for in the figure legend, text, or Figure 1 is MDN-FLP. In Figure 10 the y-axis label is ‘Probability (%)’, probability of what? Crawling backward? In Figure 10 in the nerve cord schematics there are red objects that have never been seen before, it would aid the reader if a meaningful label was added.

3) Figure 6A. In the schematic the green tracing looks like AMB yet R60F09-GAL4 is used instead of AMB-GAL4, is this a typo or is R60F09 also AMB-GAL4?

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Have all data underlying the figures and results presented in the manuscript been provided?

Large-scale datasets should be made available via a public repository as described in the PLOS Genetics data availability policy, and numerical data that underlies graphs or summary statistics should be provided in spreadsheet form as supporting information.

Reviewer #1: Yes

Reviewer #2: No: The authors state that the data sets will be available upon 'reasonable' request from the corresponding author. They should make all the data available in public repositories that allows reanalysis and replication of findings including behavioral and functional imaging experiments.

Reviewer #3: Yes

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Reviewer #1: No

Reviewer #2: No

Reviewer #3: No

Decision Letter 1

Gregory S Barsh, Peter Soba

15 Sep 2020

Dear Kazuo,

We are pleased to inform you that your manuscript entitled "A pair of ascending neurons in the subesophageal zone mediates aversive sensory inputs-evoked backward locomotion in Drosophila larvae" has been editorially accepted for publication in PLOS Genetics. Congratulations!

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Comments from the reviewers (if applicable):

Dear Kazuo,

thank you very much for submitting the revised version of your manuscript. I think the new data and modifications satisfy all major comments of the reviewers and have significantly improved the paper. The comments that were not experimentally addressed are not crucial for the major conclusion of the paper and beyond the scope of the current manuscript. Therefore, we are happy to accept your paper editorially in its current format.

Best,

Peter

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Acceptance letter

Gregory S Barsh, Peter Soba

13 Oct 2020

PGENETICS-D-20-00430R1

A pair of ascending neurons in the subesophageal zone mediates aversive sensory inputs-evoked backward locomotion in Drosophila larvae

Dear Dr Emoto,

We are pleased to inform you that your manuscript entitled "A pair of ascending neurons in the subesophageal zone mediates aversive sensory inputs-evoked backward locomotion in Drosophila larvae" has been formally accepted for publication in PLOS Genetics! Your manuscript is now with our production department and you will be notified of the publication date in due course.

The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript.

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Thank you again for supporting PLOS Genetics and open-access publishing. We are looking forward to publishing your work!

With kind regards,

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On behalf of:

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Fig. R73F04-GAL4 labels MDNs.

    (A) Expression pattern of MDN-labeling GAL4 used in this study. The yellow arrowheads indicate the soma of MDNs. Genotypes: w; UAS-mCD8GFP, tsh-GAL80/+; R73F04-GAL4/+(R73F04-GAL4); w; UAS-mCD8GFP, tsh-GAL80/+; R73F04-GAL4, Gad1-2A-GAL80/+ (MDN-ACh); w; UAS-mCD8GFP/Otd-FLP, tub-FRT-GAL80-FRT; R73F04-GAL4, Gad1-2A-GAL80/+ (MDN-FLP). Scale bar, 100 μm. (B) Dual-labeling with MDN-labeling GAL4 used in the previous study [7] and R73F04-LexA. The yellow dot square in the upper row indicates the area shown in the lower row. The yellow arrowheads indicate both R73F04-LexA and SS01613-GAL4 label the soma of MDNs. Scale bar, 50 μm.

    (TIF)

    S2 Fig

    Two distinct GAL4 lines label AMBs (A) Expression patterns of R60F09-LexA in the third instar larval CNS. The yellow arrowheads indicate the soma of AMBs. Maximum intensity projection of the entire CNS shown. Genotypes: LexAop-mCD8GFP, UAS-mCD8RFP/+; R60F09-LexA/+; +/+. Scale bar, 100 μm. (B, C) The number of backward/forward waves in 10 seconds before (OFF) or during (ON) optogenetic activation with CsChrimson. n = 15 for each genotype. We assessed statistical significance by the Wilcoxon rank sum test with Holm method. ***p < 0.001. (D) R60F09-LexA and R73D06-GAL4 co-label AMBs. The yellow dot square indicates the area shown in the lower row. The yellow arrowheads indicate the somas of AMBs. Genotypes: LexAop-mCD8GFP, UAS-mCD8RFP/+; R60F09-LexA/+; R73D06-GAL4/+. Scale bars, 50 μm. (E) GAL80 labeled by R60F09-LexA diminishes CsChrimson expression in AMBs labeled by R73D06-GAL4 co-labeling. The yellow arrowheads indicate the somas of AMBs. Genotypes: w; LexAop-rCD2RFP/R60F09-LexA, tsh-GAL80; R73D06-GAL4/UAS-CsChrimson (the upper row), w; LexAop-rCD2RFP/R60F09-LexA, tsh-GAL80; R73D06-GAL4/UAS-CsChrimson, LexAop-GAL80 (the lower row). Scale bars, 50 μm. (F, G) The number of backward/forward waves in 10 seconds before (OFF) or during (ON) optogenetic activation with CsChrimson. n = 18, 20 for each genotype. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed statistical significance by the Wilcoxon rank sum test with Holm method. ***p < 0.001. (H) Probability of animals showing rolling behavior in 10 seconds before (OFF) or during (ON) optogenetic activation with CsChrimson. We assessed statistical significance by the Fisher’s exact test.

    (TIF)

    S3 Fig. Positive and negative controls for anti-ChAT immunohistochemistry.

    (A) Positive control for anti-ChAT. Anti-ChAT stained MDN somas that are reported to be cholinergic neurons in the previous study [7]. (B) Negative control of 2nd antibodies for immunohistochemistry. No detectable immunostaining was observed in the AMB somas without anti-ChAT antibody. Scale bars, 10 μm.

    (TIF)

    S4 Fig. Optogenetic activation of AMBs or MDNs triggers similar repetitive backward locomotion.

    (A) Behavior events are color-coded: forward movement (grey), stop (white), bending (yellow), bending with backward locomotion (orange), and backward locomotion (red). (B-D) Behavior ethograms upon optogenetic stimulation of AMBs or MDNs. An animal expressing CsChrimson in either population was subjected to optogenetic activation for 30 seconds. Representative data from 10 different animals are shown for each genotype. (E-H) The number of backward/forward waves or percentage of time spent in a behavioral mode in 10 seconds before (OFF) and during (ON) optogenetic AMB activation with CsChrimson while silencing MDNs. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed the statistical significance by the Wilcoxon rank-sum test with the Holm method. ***p < 0.001.

    (TIF)

    S5 Fig. Blue light irradiation evokes Ca2+ responses in AMBs via C4da neurons.

    (A) A schematic view of Ca2+ imaging on AMB’s soma while ablating C4da neurons. Genotypes: UAS-rpr/+; R60F09-LexA, LexAop-GCaMP6s; ppk-GAL4/+ (+rpr); UAS-rpr/+; R60F09-LexA, LexAop-GCaMP6s; +/+ (-rpr). (B) Time series of Ca2+ responses in the soma of AMBs upon blue light irradiation. We applied stimulation in the period indicated by the blue band. Data are shown as the mean ± SEM. -rpr, n = 40; +rpr, n = 43. (C) Average of AMB ΔF/F0 values in 5 seconds before (OFF) or last 5 seconds during (ON) optogenetic activation. In the boxplot, the width of the box represents the interquartile range. The whiskers extend to the data point which is less than 1.5 times the length of the box away from the box, and the dot represent outlier. We assessed statistical significance by paired t test for paired samples and Welch’s two sample t-test for unpaired samples. **p < 0.01.

    (TIF)

    S1 Movie. Activation of AMBs or MDNs evokes backward locomotion.

    The movie shows the response of effector control, AMB > CsChrimson, and MDN-FLP > CsChrimson larvae before and after optogenetic activation of the neurons. The movie is played at 2 times speed.

    (MP4)

    S2 Movie. Application of gentle touch evokes backward locomotion.

    The movie shows the response of effector control, AMB > TNT, and MDN-FLP > TNT larvae toward gentle touch by an eyelash.

    (MP4)

    S3 Movie. Application of a blue light spot evokes backward locomotion.

    The movie shows the response of effector control, AMB > TNT, and MDN-FLP > TNT larvae upon 5 seconds of blue light stimulation. The white circle in the movie indicates the area of a blue light spot.

    (MP4)

    S4 Movie. Dead ends evoke backward locomotion.

    The movie shows the behavior of effector control, AMB > TNT, and MDN-FLP > TNT larvae in the dead-end narrow chamber. All the larvae shown here are headed to left side.

    (MP4)

    S1 Table. Genotypes of GAL4 lines utilized in Fig 1.

    (XLSX)

    S2 Table. Numerical data and statistical analysis used in this study.

    (XLSX)

    Attachment

    Submitted filename: 2020 Omamiuda et al. PLOS Genet rebbutal.docx

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting Information files.

    The datasets generated and/or analyzed during the study are available from the corresponding author on reasonable request.


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