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. 2020 Jun 25;48(14):8205–8207. doi: 10.1093/nar/gkaa554

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update

Vahid Jalili 1, Enis Afgan 2, Qiang Gu 3, Dave Clements 4, Daniel Blankenberg 5, Jeremy Goecks 6, James Taylor 7, Anton Nekrutenko 8,
PMCID: PMC7641327  PMID: 32585001

Nucleic Acids Research, 2020, gkaa434, https://doi.org/10.1093/nar/gkaa434

Galaxy project is a community driven effort to promote openness and reproducibility of data analyses in biomedical research. Our original publication has made a grave mistake of omitting many key participants of this effort. Here we are attempting to correct this error. We are including a new, greatly expanded version of Table 1. Again, we regret our mistake and will ensure that it will not occur again.

Table 1.

Members of the four major regional Galaxy teams–Africa, Australia, Europe and North America

Region Members Affiliation
Africa Christopher Barnett, Tharindu Senapathi Chemistry Department and Scientific Computing Research Unit at the University of Cape Town
Thoba Lose, Ziphozakhe Mashologu, Peter van Heusden South African National Bioinformatics Institute, University of the Western Cape, South Africa
Australia Catherine Bromhead, Simon Gladman, Nuwan Goonasekera, Christina Hall, Andrew Lonie Melbourne Bioinformatics, University of Melbourne, Melbourne, Victoria, Australia
Maria Doyle Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia
Thom Cuddihy, Igor Makunin, Gareth Price, Nick Rhodes, Michael Thang QFAB Bioinformatics, QCIF, Brisbane, Queensland, Australia
Europe Loraine Brillet-Guéguen, Gildas Le Corguillé ABiMS, Roscoff, France
Christophe Antoniewski ARTbio, CNRS and Sorbonne Université, Paris France
Léa Bellenger ARTbio, INSERM and Sorbonne Université, Paris, France
Naïra Naouar ARTbio, Sorbonne Université, Paris, France
Nadia Goué AuBi, Mesocentre, Clermont Auvergne University, France
Saskia Hiltemann, Youri Hoogstrate, Bas Horsman, Rick Jansen, Yunlei Li, Andrew Stubbs, David van Zessen Bioinformatics, Erasmus MC Cancer Institute, Rotterdam, Netherlands
Frederik Coppens, Bert Droesbeke, Ignacio Eguinoa, Michiel Van Bel Center for Plant Systems Biology, Vlaams Instituut voor Biotechnologie, Ghent, Belgium
Jean-François Dufayard, Maryline Summo CIRAD, Montpellier, France
Anshu Bhardwaj CSIR-Institute of Microbial Technology, France
Tomas Klingström Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden
Federico Zambelli Department of Biosciences, University of Milan, Milano, Italy
Rolf Backofen, Bérénice Batut, Simon Bray, Gianmauro Cuccuru, Anika Erxleben, Stephan Flemming, Björn Grüning, Alireza Khanteymoori, Anup Kumar, Jan Leendertse, Wolfgang Maier, Helena Rasche, Mehmet Tekman, Joachim Wolff, Oleg Zharkov Department of Computer Science, Albert-Ludwigs-University Freiburg, Freiburg, Germany
Anne Fouilloux Department of Geosciences, University of Oslo, Norway
Florence Combes, Yves Vandenbrouck Department of Health, CEA, Grenoble, France
Nicola Soranzo Earlham Institute, Norwich Research Park, Norwich, UK
Lucille Lopez-Delisle EPFL SV ISREC UPDUB, 1015 Lausanne, Switzerland
Pablo Moreno European Bioinformatics Institute (EMBL-EBI)
Hans-Rudolf Hotz Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland
Sarah Maman GenPhySE, Université de Toulouse, INRA, INPT, ENVT, Castanet Tolosan, France
Matthias Bernt Helmholtz Centre for Environmental Research, UFZ, Young Investigators Group Bioinformatics and Transcriptomics, Leipzig, Germany
Anthony Bretaudeau IGEPP, INRAE, Institut Agro, Univ Rennes, Rennes, France
Timothy Dudgeon Informatics Matters Ltd.
Olivier Inizan, Valentin Loux INRAE, Jouy-en-Josas, France
Kenzo-Hugo Hillion, Valentin Marcon, Fabien Mareuil, Hervé Ménager, Rémi Planel Institut Pasteur, Paris, France
Marco Antonio Tangaro Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council, Bari, Italy
Alexis Dereeper Institute of Research for Development, Marseille, France
Melanie Föll Institute of Surgical Pathology, Medical Center, Albert-Ludwigs-University Freiburg, Freiburg, Germany
Peter Cock James Hutton Institute, UK
Peter Selten KWS SAAT SE & Co. KGaA
Ruben Vorderman Leiden University Medical Center, Netherlands
Alan Amossé, Yvan Le Bras, Coline Royaux Museum National d’Histoire Naturelle, Paris, France
Franck Giacomoni PFEM, INRAE, Saint Genès Champanelle, France
Thanh Le-Viet, Andrew Page Quadram Institute Bioscience, Norwich Research Park, Norwich, UK
Thomas Lawson School of Biosciences, University of Birmingham, UK
Olivier Sallou Univ Rennes, Inria, CNRS, IRISA, Rennes France
Ralf Weber University of Birmingham, UK
Krzysztof Poterlowicz University of Bradford, UK
Ivan Kuzmin University of Tartu, Estonia
North America Dan Fornika BC Centre for Disease Control, Canada
Carrie Ganote Bioinformatics Analyst at Indiana University, USA
Dave Bouvier, Martin Čech, John Chilton, Nate Coraor, Assunta DeSanto, Jennifer Hillman-Jackson, Kaivan Kamali, Nick Keener, Delphine Lariviere, Anton Nekrutenko, Nick Stoler, Marius van den Beek Department of Biochemistry and Molecular Biology, Penn State University, University Park, PA, USA
Enis Afgan, Dannon Baker, Dave Clements, Sergey Golitsynskiy, Juleen Graham, Aysam Guerler, Mohammad Heydarian, Alexandru Mahmoud, Alex Ostrovsky, Nathan Roach, James Taylor, Jenn Vessio Department of Biology, Johns Hopkins University, Baltimore, MD, USA
Jeremy Goecks, Qiang Gu, Mason Houtz, Vahid Jalili, Luke Sargent Department of Biomedical Engineering, School of Medicine, Oregon Health and Science University, Portland, OR, USA
Michael Schatz Dept. of Computer Science and Biology, Johns Hopkins University, Baltomore, MD, USA
Daniel Blankenberg, Jayadev Joshi, Vijay Nagampalli Genomic Medicine Institute, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA
Greg Von Kuster Huck Institutes of the Life Sciences, Penn State University, University Park, PA, USA
Robert Leach, Lance Parsons Lewis-Sigler Institute of Integrative Genomics, Princeton University, USA
Brad Langhorst New England Biolabs, USA
Philip Mabon, Aaron Petkau, Jeffrey Thiessen Public Health Agency of Canada, Canada
Arthur Eschenlauer, Tim Griffin, Pratik Jagtap, James Johnson, Praveen Kumar, Subina Mehta University of Minnesota, Minnesota, Minneapolis, MN, USA

The published article has been updated. This correction does not affect the results or conclusions of the article.

Contributor Information

Vahid Jalili, Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA.

Enis Afgan, Department of Biology, Johns Hopkins University, Baltimore, MD, USA.

Qiang Gu, Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA.

Dave Clements, Department of Biology, Johns Hopkins University, Baltimore, MD, USA.

Daniel Blankenberg, Genomic Medicine Institute, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.

Jeremy Goecks, Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA.

James Taylor, Department of Biology, Johns Hopkins University, Baltimore, MD, USA.

Anton Nekrutenko, Department of Biochemistry and Molecular Biology, Penn State University, University Park, PA, USA.


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