Table 1.
Alignment | No. of genomes | Total bases | Instance-hours | Core-hours | Common ancestor size |
---|---|---|---|---|---|
Zoonomia | 242 | 669 billion | 68,166 | 1.9 million | 1.73 Gb |
B10K | 363 | 400 billion | 5,302 | 0.2 million | 1.13 Gb |
Combined | 605 | 1.07 trillion | 73,692 | 2.1 million | 181 Mb |
The increase in computational work for the mammal alignment compared with the bird alignment is largely caused by the increase in the pairwise alignment phase runtime because it scales quadratically with the size of the genomes being aligned.