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PLOS One logoLink to PLOS One
. 2020 Nov 20;15(11):e0242435. doi: 10.1371/journal.pone.0242435

Mathematical modelling and control of African animal trypanosomosis with interacting populations in West Africa—Could biting flies be important in main taining the disease endemicity?

Paul Olalekan Odeniran 1,2,*,#, Akindele Akano Onifade 3,#, Ewan Thomas MacLeod 2,, Isaiah Oluwafemi Ademola 1,, Simon Alderton 4,, Susan Christina Welburn 2,5,
Editor: Simon Clegg6
PMCID: PMC7679153  PMID: 33216770

Abstract

African animal trypanosomosis (AAT) is transmitted cyclically by tsetse flies and mechanically by biting flies (tabanids and stomoxyines) in West Africa. AAT caused by Trypanosoma congolense, T. vivax and T. brucei brucei is a major threat to the cattle industry. A mathematical model involving three vertebrate hosts (cattle, small ruminants and wildlife) and three vector flies (Tsetse flies, tabanids and stomoxyines) was described to identify elimination strategies. The basic reproduction number (R0) was obtained with respect to the growth rate of infected wildlife (reservoir hosts) present around the susceptible population using a next generation matrix technique. With the aid of suitable Lyapunov functions, stability analyses of disease-free and endemic equilibria were established. Simulation of the predictive model was presented by solving the system of ordinary differential equations to explore the behaviour of the model. An operational area in southwest Nigeria was simulated using generated pertinent data. The R0 < 1 in the formulated model indicates the elimination of AAT. The comprehensive use of insecticide treated targets and insecticide treated cattle (ITT/ITC) affected the feeding tsetse and other biting flies resulting in R0 < 1. The insecticide type, application timing and method, expertise and environmental conditions could affect the model stability. In areas with abundant biting flies and no tsetse flies, T. vivax showed R0 > 1 when infected wildlife hosts were present. High tsetse populations revealed R0 <1 for T. vivax when ITT and ITC were administered, either individually or together. Elimination of the transmitting vectors of AAT could cost a total of US$ 1,056,990 in southwest Nigeria. Hence, AAT in West Africa can only be controlled by strategically applying insecticides targeting all transmitting vectors, appropriate use of trypanocides, and institutionalising an appropriate barrier between the domestic and sylvatic areas.

Introduction

African animal trypanosomosis is a major constraint to sustainable livestock development in sub-Saharan Africa [1]. Tsetse flies (genus: Glossina) are the biological vectors of AAT caused by extracellular protozoan parasites of the genus Trypanosoma. The major causal organisms in livestock and wildlife are T. congolense, T. vivax and T. brucei brucei. There are other trypanosome species which are also of significant importance to the livestock herds such as T. evansi and T. simiae. There are complexities in the transmission dynamics of AAT. While Trypanosoma brucei rhodesiense, a common human pathogen has been incriminated to infect cattle in eastern Africa [2], the pathogen is absent in western Africa. More so, Trypanosoma brucei gambiense which affect humans in West Africa is rarely observed in livestock [3].

AAT is a well-known disease, causing devastating losses to the livestock industry which have been estimated to exceed US$ 1.3 billion annually [46]. Biting flies (families: Tabanidae and Muscidae) are effective mechanical vectors and are assumed to maintain AAT levels in various homesteads in sub-Saharan Africa [7]. In several countries there have been reports of AAT in cattle settlements free of tsetse flies, but where biting flies are abundant e.g. northern Nigeria, Cameroon and Chad [810]. The abundance of biting flies throughout the year is important in the epidemiology of the disease and parasite diversities among livestock hosts [11].

Human activities such as transhumance, settlement patterns, and vegetational changes have caused significant modifications in the vector habitat [6]. Recent natural occurrences such as persistent drought, landscape fragmentation, deforestation, environmental degradation, population pressure, and thinning out of wildlife, have been responsible for changes to the vector distribution map [6, 1214]. These factors have significant importance on the epidemiology and control of AAT.

The elimination of vectors to control the disease has been focused on the biological vector, the tsetse fly, and most countries have engaged in prompt intervention strategies in the past such as aerial spraying of insecticides, sterile insect technique (SIT) and the most recent use of ethnoveterinary methods against the vector [15, 16]. Commonly used methods in West Africa are the use of insecticides (insecticide treated-targets (ITT) and insecticide treated-cattle (ITC)) and trypanocides to control the disease. However, the insecticide application strategy and methods have been reported to encourage resistance in biting flies [17]. The Pan-African Tsetse and Trypanosomiasis Eradication Campaign (PATTEC) in endemic areas is struggling to combat the disease in livestock in most countries since 2001, when it was initiated to eliminate tsetse in an area-wide approach [18].

Existing predictive models of AAT only consider the biological vectors Glossina spp., ignoring the possible importance of mechanical vectors [1922]. The vector competence of Trypanosoma species in some tabanids and stomoxyines have been reported as a threat to the livestock industry [2325], yet the elimination programmes often exclude these groups of flies (e.g. sterile insect techniques, aerial spraying of insecticides along tsetse pockets). Biting flies have been reported to display a wide range of activity patterns such as diurnal, nocturnal or crepuscular. Hence, various species are active at different times of the day [26], and this may have an indirect impact on resistance to insecticides.

The complexities of trypanosomosis transmission had limited the development of mathematical models, citing similarities with other vector-borne diseases like malaria [19]. Also, the few developed AAT models simulated from field conditions between susceptible cattle contracting trypanosomosis and tsetse infections had suffered as a result of knowledge gaps [20, 21]. This involves the inability to incorporate biting flies in field-based models because of its exclusion from the infectious group. However, the biting flies could be contaminated with T. vivax and mechanically transmit trypanosomes without being necessarily in the infectious group. These are important modelling factors to be considered in an all inclusive elimination approach. Several factors could affect the equilibrium conditions or the stability properties of AAT compartmental models considered (susceptible, exposed, infected, contaminated and recovered).

Therefore, this paper describes an agent-based model of T. congolense, T. vivax and T. b. brucei for the African animal trypanosomosis that incorporates three vertebrate hosts (cattle, small ruminants and wildlife), and three vector species (biological vector– Glossina spp. and two mechanical vectors-Tabanus spp. and Stomoxys spp.). We also evaluated the probability of the model in the preliminary report conducted in southwest Nigeria and explained the reality of its elimination. The developed model can easily be adapted in identifying crucial research priorities and providing several novel approaches in the control of AAT.

Materials and methods

Ethics

All protocols and procedures used in the field work were reviewed and approved by the University of Ibadan Animal Ethics Committtee with approval number (UI-ACUREC/App/12/2016/05).

Model formulation

Cattle population and modelling

The model targets cattle as they play an important role in food security and can be seriously affected by AAT. The total cattle population size at time t denoted by Nk(t) is divided into susceptible cattle Sk(t), exposed cattle Ek(t), infected cattle Ik(t) and recovered cattle Rk(t). Hence, we have Nk(t) = Sk(t) + Ek(t) + Ik(t) + Rk(t). For the cattle population: Λk is the rate of new individuals entering the population, while μk and τk are the natural and disease induced death rates respectively. In the model, the terms k1 Sk It, k2 Sk Tc and k3 Sk Sc denote the rates at which the cattle hosts get infected with AAT when they have contact with infected tsetse, It(t), contaminated Tabanids, Tc(t) and contaminated stomoxyines Sc(t) with T. vivax (Table 1).

Table 1. Description of parameters.
Definition Symbols Value Source
Cattle recruitment rate Λk 115×365 Estimated
Cattle loss of immunity ω 112 [19]
Natural death rate of cattle μk 150×365 Estimated
Progression rate of exposed cattle αk 0.516 [3]
Proportion of effective treatment ρ 0.12 [19]
Recovery rate rk 0.1 [19]
Death rate of tsetse fly σt 0.212 [19]
Progression rate of exposed tsetse fly γt 0.028 [31]
Stomoxys recruitment rate Λs 0.075 Estimated
Tabanus recruitment rate Λb 0.0000548 Estimated
Natural death rate of tsetse fly μt 133 [31]
Natural death rate of Tabanus μb 133 [3]
Flies contact rate b 114 [3]
Transmission of infection to Tabanus α1 0.014 [31]
Transmission of infection to small ruminants ζi, i = 1, 2, 3 0.27 Estimated
Death rate of Tabanus (insecticide) δb 125 [31]
Death rate of Stomoxys (insecticide) δs 175 [3]
Transmission of infection to Stomoxys α2 0.031 [31]
Transmission of infection to cattle φk1 0.29 [3]
Transmission of infection from Tabanus to cattle φk2 0.33 [31]
Small ruminants disease induced death rate ϕ 0.2 Estimated
Transmission of infection to wildlife τi, i = 1, 2, 3 0.28 Estimated
Small ruminant recovery rate θ 0.29 Estimated
Small ruminant loss of immunity θ1 0.78 Estimated
Transmission of infection from Stomoxys to cattle φk3 0.153 [31]

Small ruminant population target

Small ruminants (sheep and goats) develop clinical AAT during heavy challenge of trypanosomes. In endemic regions, small ruminants need to be treated to be in the recovered class. While those in the recovered class could return to the susceptible class if exposed to trypanosome infection in cases of persistent challenge, they rightly fit in the SIR model (susceptible, infected and recovered). Meanwhile, at the subclinical level of trypanosome infection, they are thought to maintain the infection in the domestic livestock cycle, serving as reservoirs for Trypanosoma species. This peculiar AAT eco-epidemiological situation in western Africa could largely be attributed to breed selection over the years (e.g. the West African dwarf goats and sheep) [16]. The total small ruminant population size at time t denoted by Nr(t) is divided into susceptible small ruminant, Sr(t), infected small ruminant, Ir(t) and recovered small ruminant, Rr(t). Thus, we have Nr(t) = Sr(t) + Ir(t) + Rr(t). For a small ruminant population, Λr is the small ruminant input rate of new individuals entering the population. μr and ϕ are the natural and disease induced death rates respectively. The terms r1 Sr It, 2 Sr Tc, 3 Sr Sc denote the rates at which the small ruminant hosts get infected with AAT when they have contact with infected tsetse, It(t), contaminated Tabanids, Tc(t) and contaminated stomoxyines, Sc(t) (Table 1).

Wildlife population target

Wildlife hosts are described in this model to maintain the disease in the domestic cycle, because they serve as reservoirs of Trypanosoma species. They rightly fit in the SI model (susceptible and infected). The total wildlife population size at time t denoted by Nw(t) is divided into susceptible wildlife, Sw, and infected wildlife, Iw. Thus, we have Nw(t) = Sw(t) + Iw(t). For a wildlife population: Λw is the wildlife input rate of new individuals entering the population and μw denotes the natural death rate. The terms 1 Sw It, 2 Sw Tc, 3 Sw Sc denote the rates at which the wildlife hosts get infected with AAT when they have contact with infected tsetse, It(t), contaminated tabanids, Tc(t) and contaminated stomoxyines, Sc(t) (Table 1).

Transmitting vectors of bovine trypanosomosis

Apart from feeding on cattle, it is assumed that tsetse flies can also be infected when feeding on infected wildlife and small ruminants with probability ω1 and ω2. Tabanus and stomoxyines cannot be infected, but contaminated with, T. vivax and then infect the cattle, small ruminants and wildlife hosts. For tsetse fly, tabanid and stomoxyine populations: Λt, Λs and Λb represent the input rate of new vectors entering the population. The total tsetse fly, tabanid and stomoxyine population sizes at time t denoted by Nt(t), NT and NS respectively, are divided into susceptible tsetse flies, St, exposed tsetse flies Et, infected tsetse flies, It, non-contaminated tabanids, Tn, contaminated tabanids, Tc with T. vivax, non-contaminated stomoxyines, Sn and contaminated stomoxyines, Sc with T. vivax. Hence, we have Nt = St + Et + It, NT = Tn + Tc and NS = Sn + Sc. The terms t θ1 St(Ik + Ir + Iw), α2 θ2 bSn(Ik + Ir + Iw) and α1 θ3 bTn(Ik + Ir + Iw) denote the rates at which susceptible tsetse flies, non-contaminated stomoxyines and non-contaminated tabanids get infected or contaminated by infected cattle, small ruminants and wildlife species dominant in the area with T. vivax. Vector populations are affected by climate-dependent parameters [22], which is considered in the model. For instance, earlier models have established that pupae and teneral populations are low compared to adults in the very hot and wet rainy season [22]. However, at any given period, the ratio of pupae to mature tsetse was approximately 2:1, with mature tsetse to teneral at 15:1, growing as high as 25:1 when the general population is lower [22]. This in turn maintained the tsetse population over time. There are sex differences of tsetse to be considered in the model. An earlier report suggested a stable population growth in both the female and male tsetse flies [22]. Differences such as longevity, infectivity, mobility, and mortality changes in respect to age and responses to baits have been reported [20, 27, 28].

Trypanosoma species of interest

The pathogenic species of trypanosomes causing bovine trypanosomosis were considered in the model. The interactions of these species in both vertebrate and invertebrate hosts are important to the understanding of disease epidemiology. For the agent-based model, T. congolense, T. vivax and T. b. brucei were considered in the analysis. While the three parasites could be transmitted by tsetse flies, biting flies could only transmit T. vivax. All three parasites were considered with the assumption of its presence in the cattle, small ruminant and wildlife populations, provided the vector flies (tsetse flies and biting flies) are abundant. In the absence of tsetse flies, we incorporated biting flies, presence of wildlife species and examined the disease state (especially prevailing Trypanosoma species) in small ruminants and cattle herds. A schematic diagram of the model has been constructed (Fig 1). Based on the above assumptions, we have the following non-linear ordinary differential equations.

dSkdt=Λk-bSk(φk1It+φk2Tc+φk3Sc)+ωRk-μkSk (0.1)
dEkdt=bSk(φk1It+φk2Tc+φk3Sc)-(αk+μk)Ek (0.2)
dIkdt=αkEk-(ρrk+τk+μk)Ik (0.3)
dRkdt=ρrkIk-(ω+μk)Rk (0.4)
dStdt=Λt-bφtSt(Ik+Ir+Iw)-(μt+σt)St (0.5)
dEtdt=bφtSt(Ik+Ir+Iw)-(γt+μt+σt)Et (0.6)
dItdt=γtEt-(μt+σt)It (0.7)
dSndt=Λs-bα2Sn(Ik+Ir+Iw)-(μs+δs)Sn (0.8)
dScdt=bα2Sn(Ik+Ir+Iw)-(μs+δs)Sc (0.9)
dTndt=Λb-bα1Tn(Ik+Ir+Iw)-(μb+δb)Tn (0.10)
dTcdt=bα1Tn(Ik+Ir+Iw)-(μb+δb)Tc (0.11)
dSwdt=Λw-eω1bSw(τ1It+τ2Tc+τ3Sc)-μwSw (0.12)
dIwdt=eω1bSw(τ1It+τ2Tc+τ3Sc)-μwIw (0.13)
dSrdt=Λr-eω2bSr(ζ1It+ζ2Tc+ζ3Sc)+θ1Rr-μrSr (0.14)
dIrdt=eω2bSr(ζ1It+ζ2Tc+ζ3Sc)-(θ+ϕ+μr)Ir (0.15)
dRrdt=θIr-(θ1+μr)Rr (0.16)
Fig 1. Compartmental diagram of the constructed model involving the interaction of cattle, small ruminants, wildlife, tsetse flies, tabanids and Stomoxys with Trypanosoma species.

Fig 1

NB: we denote λk = bSk(φk1It + φk2 Tc + φk3Sc), λt = t St(Ik + Iw + Ir), λs = 2 Sn(Ik + Iw + Ir), λT = 1 Tn(Ik + Iw + Ir), λw=eω1bSw(τ1It+τ2Tc+τ3Sc), λr=eω2bSr(ζ1It+ζ2Tc+ζ3Sc), τ = (τ1 + τ2 + τ3), ζ = (ζ1 + ζ2 + ζ3) in the model diagram and model analysis.

The model (0.1)(0.16) is simulated using the listed parameters as shown in Tables 1 and 2. The symbols, values and list of references were included. Some values were estimated based on the results from the field data in southwest Nigeria.

Table 2. Trypanosoma species variables.
Definition T. vivax T.congolense T. b.brucei Sources
IP in tsetse fly 10 20 25 [19]
TR from infected tsetse to susceptible cattle 0.29 0.46 0.62 [20]
IR of G. palpalis- mouth infections only 0.281 0.001 0.516 [31]
IR of G. tachinides- mouth infections only 0.155 0.042 0.127 [31]
IR of S. calcitrans- mouth infections only 0.153 - - [31]
IR of S. niger niger- mouth infections only 0.083 - - [31]
IR of Tabanus species- mouth infections only 0.184 - - [31]
IP of trypanosomes in G. palpalis 12 15 12 [19]
IP of trypanosomes in G. tachinoides 12 15 12 [19]
Natural mortality rate in tsetse 0.212 0.212 0.212 [19]
Duration of immunity in cattle 100 100 50 [20]
IP in cattle 12 15 12 [20]
TR of trypanosomes from vertebrate to tsetse 0.177 0.025 0.065 [20]

IP = Incubation Period, IR = Infectious Rate, TR = Transmission Rate

Since the model monitors changes in the cattle, small ruminant, wildlife, tsetse fly, tabanid and stomoxyine populations, the variables and the parameters are assumed to be non-negative for all t ≥ 0, therefore Eqs (0.1)(0.16) were analysed in a feasible region R of biological interest.

There are factors that affect the transmission dynamics of AAT and its transmitting vectors including environmental variables (temperature, humidity, rainfall, wind speed), vegetational factors (drought, degradation, deforestation, overcrowding) and conflicts (cattle rustling, insurgencies, social disagreements). Tsetse reproduction, densities, abundance, distribution and susceptibility are indirectly affected by these aforementioned factors [15, 29]. For the intervention strategy using trypanocides, we assumed that treating cattle with a trypanocidal drug has a 75-100% efficacy. Infected cattle are moved to the recovered class, provided they are not exposed to infected transmitting vectors during the trypanocide withdrawal period. This model suggests that areas free of tsetse flies contributed nothing to the R0. Also, the biting flies could be selective in feeding methods, depending on the treatment status of the cattle herd with trypanocides and insecticides. The presence of wildlife in the area could change the status of the model especially with some specific species such as T. vivax. The strategic application of ITT and ITC on the vector flies using a regional approach concluded the model. This strategic control method is feasible in West African countries (Fig 2).

Fig 2. Map showing West African countries and the operational area in southwest Nigeria.

Fig 2

Assessment of control strategy in southwest Nigeria using Tsetse Plan

In order to validate our model, experimental and field assessment was done using Tsetse Plan (available from tsetse.org). The software provides implementation strategy and control cost of AAT directly from the field. This study was carried out in southwest Nigeria between April 2016 and March 2017. The study area landmass is about 78, 000 km2, however, cattle settlement area is about 11000th of this total area. Blood samples were randomly collected from 745 cattle in southwest Nigeria, and screened for trypanosome DNA [3]. Nzi traps were set in the study sites to effectively trap both tsetse and biting flies [30, 31]. The values from these experiments were computed as parameters in the model. The landing preference of tsetse flies and biting flies on cattle suggests that insecticidal application methods can improve the control strategy [32, 33].

The tsetse software analyses the control plans and their relative costs for AAT in a geographical area (also known as Tsetse Plan). Targeted animals to be protected were livestock (cattle and small ruminants). The trapped tsetse species in the preliminary study were G. palpalis and G. tachinoides (Palpalis group) which is in line with the stability model. The population density of the tsetse species was assumed to be medium (fly density estimated at 300—1000 flies per km2) from the overall report. A “cross” shape was selected to represent the tsetse distribution for the affected study area, which indicates that invasion is from the north, east and west (adjacent invasion areas). It was estimated that 10,000 cattle graze in the operational area that are available for insecticidal treatment (ITC), excluding those involved with zero grazing. The small ruminant population was 75% larger than the cattle population (i.e. 17,500 small ruminants) in this location. These livestock were not often targeted during treatment and mostly show subclinical signs of trypanosomosis. However, the insecticidal treatment (ITC) has been frequently used to directly protect livestock against tsetse flies and biting flies. Wildlife is assumed to be absent in a 40 km2 area out of the 70 km2 operational study area in this simulation, which indicates a very low wildlife reservoir (with approximately five wildlife per km2), while cattle do not have contact with wildlife in grazing areas.

Pertinent data obtained from the project area with tsetse plan

Elimination or continuous control of vector flies and AAT in a hypothetical area of 10,000 km2 located in southwest Nigeria was examined to validate our model. The estimated area that should be completely cleared of tsetse flies from the model (this area needs baits for at least eight months, while clearance occurs) is 1386 km2. However, areas where invading tsetse will occur at much reduced density (this area will need baits indefinitely to deal with invaders) is 378 km2. Hence, the total calculated project area is 1764 km2. In this study, biting flies (mechanical vectors) are also considered to be involved in the transmission of trypanosomes, therefore the choice of trap is important in the project. Since the project area is subject to tsetse invasion, the invading vector flies must enter the area to be killed. There will always be few tsetse in those areas that are less than about 3 km2 from the invasion front. If baits are not maintained properly near the front, the flies will invade in greater numbers, possibly nullifying previous control efforts.

Expectation from the operational area

Since the flies will not be removed totally and permanently from the project area, the cattle will still need to be examined for trypanosomosis and administered trypanocidal drugs, albeit perhaps less intensively. The vegetation area needs to be considered in the planning since it affects the tsetse species distribution (S1 Fig). Hence, baited Nzi traps should be considered for effectiveness. Cattle in the middle of the operational area, where the flies need be reduced or were absent, might go much nearer to the invasion source(s) to graze and drink, increasing the risk of infection (S2S4 Figs).

Obvious concerns of increasing the size of the cleared area relative to the invaded area is expected to make invasion less significant. The estimated densities of various sizes of cattle are shown to be: large cattle (> 150 kg)- 4.7 per km2 and small cattle (< 150 kg)- 4.7 per km2. The calculated numbers of bait estimated for the control operations are (i) treated cattle- larger animals only (760), (ii) targets- without odours (11,300), (iii) traps- without odours (250).

Cost estimation

There are thirteen input stages in preparing the cost estimation with Tsetse Plan software. The cost analysis is technique dependent. In this study, trapping, ITC and ITT were considered in the model as viable control techniques for western Africa. In cases of animal movement where sufficient livestock are present for ITC, insecticides are often applied by spraying (restricted-insecticide application protocol (RAP) has been cost effective) or pour on. The cost of traps is relatively high (not necessarily the cost of acquiring the traps), because of the cost of manpower required for deployment which is dependent on density. Notably, the targeted vector flies were Glossina species and biting flies, which means that a combination of techniques was required.

Data analysis

Epidemiological data from field studies were entered into the Tsetse Plan software which automatically generates post-analysis results. The estimation of parameters was achieved using the least squares method in Excel solver [34], with a view to minimising summation of squared errors given by ∑(Y(t, p) − Xreal)2 subject to the AAT model (0.1)(0.16) where Xreal is the field reported data, and Y(t, p) represents the solution of the model corresponding to the number of active cases divided by time t with the set of estimated parameters denoted by p. The numerical simulations were conducted using Maple 17 software and the results illustrate the system’s behaviour for different values of model parameters. Some of the parameters were estimated from the epidemiological data. Population variables for the model were considered across the study area in western Africa using QGIS software (Version 2.18).

Results

Population growth of cattle is observed when there is a reduction in the infected cattle population compared to the susceptible cattle population due to the intervention strategies.

The growth can be narrowed if there is a problem with the balance such as problems of trypanocidal and insecticidal resistance (for biting flies, which could pose continuous challenge), changing climate, epidemics from other infectious diseases, ecological instability and human activities.

Theorem 1: The feasible region R defined by {Sk(t),Ek(t),Ik(t),Rk(t),St(t),Et(t),It(t),Sn(t),Sc(t),Tn(t),Tc(t),Sw(t),Iw(t),Sr(t),Ir(t),Rr(t)R16:Nk(0)Nk(t)Λkμk,Nt(0)Nt(t)Λtμt,Ns(0)Ns(t)Λsμs,Nb(0)Nb(t)Λbμb,Nw(0)Nw(t)Λwμw,Nr(0)Nr(t)Λrμr} with initial conditions Sk(0)>0, Ek(0)≥0, Ik(0)≥0, Rk(0)≥0, St(0)≥0, Et(0)≥0, It(0)≥0, Sn(0)≥0, Sc(0)≥0, Tn(0)≥0, Tc(0)≥0, Sw(0)≥0, Iw(0)≥0, Sr(0)≥0, Ir(0)≥0, Rr(0)≥0 is positive invariant for system (0.1)(0.16).

Proof: If the vertebrate hosts (cattle, small ruminants and wildlife) and invertebrate hosts (tsetse fly, stomoxyines, tabanids) population sizes are given by Nk(t) = Sk(t)+ Ek(t)+ Ik(t)+ Rk(t), Nt(t) = St(t)+ Et + It, Ns(t) = Sn(t)+ Sc, Nb(t) = Tn(t)+ Tc, Nw(t) = Sw(t)+ Iw(t) and Nr(t) = Sr(t)+ Ir(t)+ Rr(t). Adding the first four equations of the model (0.1)(0.16) gives dNkdtΛk-μkNk(t) so that Nk(t)Λkμk as t → ∞. Thus Λkμk is an upper bound of Nk(t) provided that Nk(0)Λkμk. Further, if Nk(0)>Λkμk then Nk(t) will decrease to this level. Similar calculation for Eqs (0.5)(0.13) and (0.14)(0.16) shows that, NtΛtμt, NsΛsμs and NtΛsμs, NwΛwμw and NrΛrμr, respectively, as t → ∞. Thus, the following feasible region:

R={Sk(t),Ek(t),Ik(t),Rk(t),St,Et,It,Sn,Sc,Tn,Tc,Sw,Iw,Sr,Ir,RrR16:Nk(t)Λkμk,Nt(t)Λtμt,Ns(t)Λsμs,Nb(t)Λbμb,Nw(t)Λwμw,Nr(t)Λrμr}

is positively- invariant. For the full proof to theorem 1 see Appendix A.

Disease-free equilibrium point

For the disease-free equilibrium, the disease states and the left-hand side of (0.1)(0.16) were set to zero. The resulting system is solved which is given

π0=(Λkμk,0,0,0,Λtμt,0,0,Λsμs,0,Λbμb,0,Λwμw,0,Λrμr,0,0)

For the ITC method of insecticidal control, vectors were targeted on the cattle rather than the parasite (trypanosomes), hence, there is mortality at the point of feeding and those occurring between feeds for all the vector flies. The probability of the vector fly surviving a feed is therefore, the product of the probabilities it feeds on untreated hosts and feeds on treated hosts and survives that meal. Therefore, we assumed that vector flies feed off all cattle at random, with respect to the cattle treatment status. Due to pastoralism and nomadic management systems being widely practised in West Africa, ITC is very effective because livestock farmers move their animals around for grazing. For ITT, areas beyond the target animals were also considered, as the vector fly populations of adjacent areas were also targeted. This is an effective method in elimination strategy, it also targets flies within and outside the target areas. ITT is most effective in areas where zero-grazing is practised. The use of ITC was more effective than ITT in the West Africa model, in which the feeding tsetse and other biting flies are affected largely because of management practises. To obtain R0 for the the model (0.1)(0.16), the next generation matrix technique earlier described by Diekmann et al [35], which was further reviewed by Van den Driessche and Watmough [36] was utilised.

FV−1 is called the next generation matrix.

F=[Fixi(x¯)]andV=[Vixi(x¯)].

Therefore, the basic reproduction number, R0, is given by

R0=ρ(FV-1)

where ρ is the spectral radius of the product, FV-1 (i.e, the dominant eigenvalue of FV-1), known as the next generation matrix.

Applying this technique to model (0.1)(0.16), we let x = (Ek(t), Ik(t), Et(t), It(t), Sc(t), Tc(t), Iw(t), Ir(t))T. Then model (0.1)(0.16) can be written as dxdt=F(x)-V(x), where, the rate of new appearance of new infection in the compartments of the model (0.1)(0.16) is obtained as

F(x)=(bSk(φk1It+φk2Tc+φk30bφtSt(Ik+Ir+Iw)0bα2Sn(Ik+Ir+Iw)bα1Tn(Ik+Ir+Iw)eω1bSw(τ1It+τ2Tc+τ3Sc)eω2bSr(ζ1It+ζ2Tc+ζ3Sc))

and the rate of individuals into and out of the compartments of the model (0.1)(0.16) are defined as

V(x)=((αk+μk)Ek(ρrk+τk+μk)Ik-αkEk(γt+μt+σt)Et(μt+σt)It-γtEt(μs+δs)Sc(μb+δb)TcμwIw(θ+φ+μr)Ir)

Find the derivative of F(x) and V(x) at the disease-free equilibrium point π0=(Λkμk,0,0,0,Λtμt,0,0,Λsμs,0,Λbμb,0,Λwμw,0,Λrμr,0,0) with respect to the disease classes results into F and V respectively, where,

F=(000bφk1Λkμkbφk3Λsμsbφk2Λbμb00000000000bφtΛtμt0000bφtΛtμtbφtΛtμt000000000bα2Λsμs0000bα2Λsμsbα2Λsμs0bα1Λbμb0000bα1Λbμbbα1Λbμb000eω1τ1Λwμweω1τ3Λwμweω1τ2Λwμw00000eω2ζ1Λwμweω2ζ3Λrμreω2ζ2Λrμr00)
V=((αk+μk)0000000-αkρrk+τk+μk00000000γt+μt+σt0000000-γtμt+σt00000000μs+δs00000000μb+δb00000000μw00000000θ+ϕ+μr)

since V is a non-singular matrix, the inverse of V, V-1 can be obtained as

V-1=(1(αk+μk)0000000αk(αk+μk)(ρrk+τk+μk)1(ρrk+τk+μk)000000001(γt+μt+σt)0000000γt(γt+μt+σt)(μt+σt)000000001μt+δt1μs+δs000000001μb+μb00000001μw000000001θ+ϕ+μr)

The basic reproduction number R01 = ρ(FV-1, is the spectral radius of the product FV-1. Hence, for the model (0.1)(0.16), we arrive at

R01=eω1+ω2[b2αkφτζφtΛkΛrΛwΛtΛsΛtαtα1α2μkμtμsμbμwμr(αk+μk)(ρrk+τk+μk)(γt+σt+μt)(σt+μt)(μb+δb)(μs+μs)(θ+ϕ+μ-r)]

In areas where tsetse flies were absent (T. vivax showed R02 > 1 in the cattle population, when infected wildlife hosts are present), and biting flies (tabanids and stomoxyines) are abundant, the basic reproduction number of AAT increases.

R02=eω1+ω2[b2αkΛkτζΛkΛwΛsΛbμkμwμsμb(αk+μk)(ρrk+τk+μk)(μb+δb)(μs+μs)]

Where ω1 is the growth rate of infected wildlife introduced in the susceptible population and ω2 is the growth rate of infected small ruminants introduced in the susceptible population. It is assumed that tsetse flies can also become infected when feeding on infected wildlife. This is common for the Morsitans and Palpalis groups which are present in West Africa. Infected tsetse can then infect susceptible hosts while taking a bloodmeal if the trypanosome infection matures. The field-data from southwest Nigeria entered for the mathematical model generated valuable results applicable to West African countries (Fig 2).

Global stability of disease-free equilibrium

The global asymptotic stability of the AAT-free equilibrium for the special case with no loss of immunity acquired by the recovered cattle and small ruminants after the treatment of trypanocides was evaluated using a similar approach [37, 38]. With the variables in the model, T. congolense and T. vivax can be controlled if all the cattle in the herd are continuously treated with trypanocides. Although, T. brucei infection showed the lowest challenge, and could even be eliminated provided the sources of infection are only from cattle. The possibility of continuous trypanocide treatment in the presence of infected vector flies poses trypanocide resistance risk to the cattle herd. AAT control strategy in the flock where there were presence of tsetse flies, tabanids and stomoxyines involved the continuous use of insecticides. Proportionate percentage of the transmitting vectors are thought to harbour T. congolense, T. vivax and T. b. brucei. In follow-up to global stability analyses [3941], we have the following results.

Theorem 2: The disease-free equilibrium, π0, of the model (0.1)(0.16), is globally asymptotically stable in R if R01 ≤ 1.

Proof: Considering the system’s Lyapunov function,

F=αkEk(t)μtμbμs(αk+μk)(ρrk+τk+μk)+Ik(t)μtμbμs(rh(ai)+τk+μk)+Et(t)bτΛt+It(t)(γt+σt+μt)bγtΛt+Sc(t)(μs+δs)bΛs+Tc(t)(μb+δb)bΛb+Iw(t)μw+Ir(t)θ+ϕ+μr (0.17)

we take the time derivative of Eq (0.17) along the solutions of the model (0.1)(0.17) and simplify to achieve the following bounds:

F˙0forR011
F˙=0ifandonlyIt(t)=0

π0 is globally asymptotically stable in R if R01 ≤ 1. The full proof to theorem 2 is presented in appendix B.

Global stability of endemic equilibrium

In this section, we investigate the global stability of endemic equilibrium of the model (0.1)(0.16).

In this scenario, “tsetse-free” areas could have an abundance of biting flies (tabanids and stomoxyines) which could be contaminated with T. vivax from infected groups of wildlife species, small ruminants or infected cattle outside the treated zone. For instance, T. vivax has managed to maintain itself in South America where tsetse flies are absent, with Tabanidae and Stomoxys acting as mechanical vectors [42]. Similarly, Anene et al. [7] observed that T. vivax was maintained in the flock by tabanids in tsetse-free areas in Nigeria.

Theorem 3: The unique endemic equilibrium, Ee*, of the model (0.1)(0.16) is globally asymptotically stable if R02 > 1.

Proof: Let R01 > 1 and R02 > 1 so that a unique endemic equilibrium exists and consider the following nonlinear Lyapunov function defined by

V=Sk(t)-Sk*-Sk*ln(Sh(t)Sk*)+Ek(t)-Ek*-Ek*ln(Ek(t)Ek**)+(ρrk+τk+μk)τk[Ik(t)-Ik*-Ik*ln(Ik(t)Ik*)]+St-St*-St**ln(StSm*)+Et-Et*-Et*ln(EtEt*)+(σt+μt)σt[It-It*-It*ln(ItIt*)]+Sn-Sn*-Sn**ln(SnSn*)+(μs+δs)δs[Sc-Sc*-Sc*ln(ScSc*)]+Tn-Tn*-Tn**ln(TnTn*)+(μb+δb)δb[Tc-Tc*-Tc*ln(TcTc*)]+1μw[Iw(t)-Iw*-Iw*ln(Iw(t)Iw*)]+θ+ϕ+μrϕ[Ir(t)-Ir*-Ir*ln(Ir(t)Ir*)] (0.18)

we take the derivative of Eq (0.18) along the solutions of the model (0.1)(0.16) and simplify to achieve the following bounds

V˙=-V1-V2-bφSk*(It*+Tc*+Sc*)[1-ItTcScIt*Tc*Sc*+Ik(t)Ik*-Ik(t)It*Tc*Sc*Ik*ItTcSc]-V3-V4-eω1bτSw(It+Tc+Sc)[1-ItTcScIt*Tc*Sc*+Iw(t)Iw*-Iw(t)It*Tc*Sc*Iw*ItTcSc]-v5-V6-eω2bζSr(It+Tc+Sc)[1-ItTcScIt*Tc*Sc*+Ir(t)Ir*-Ir(t)It*Tc*Sc*Ir*ItTcSc]-V7-V8-bφtSt(Ik+Iw+Ir)[1-IkIwIrIk*Iw*Ir*+ItTcScIt*Tc*Sc*-ItTcScIk*Iw*Ir*It*Tc*Sc*IkIwIr]-V9-V10-bα1Tn(Ik+Iw+Ir)[1-IkIwIrIk*Iw*Ir*+ItTcScIt*Tc*Sc*-ItTcScIk*Iw*Ir*It*Tc*Sc*IkIwIr]-V11-V12-bα2Sn(Ik+Iw+Ir)[1-IkIwIrIk*Iw*Ir*+ItTcScIt*Tc*Sc*-ItTcScIk*Iw*Ir*It*Tc*Sc*IkIwIr] (0.19)

further algebraic manipulation gives

f(x,y,z)=x+yx+zy+1z-4 (0.20)

It is sufficient to show that f(x, y, z)≥0. Since fx = fy = fz = 0 gives rise to x = y = z and that fxx > 0, fyy > 0, fzz > 0, one see that the minimum of f(x, y, z) is attainable at x = y = z. In what follows, (Eq 0.20) is reduced to (x − 1)2 ≥ 0 or (y − 1)2 ≥ 0 or (z − 1)2 ≥ 0 with equality if and only if x = 1 or y = 1 or z = 1 respectively. Hence, V2 ≥ 0. The proof of V3 ≥ 0 is similar to V1 ≥ 0 while that of V4 ≥ 0 is similar to V2 ≥ 0 and so on. Whenever Ik*Ik(t)=It*It=Tc*Tc=Sc*Sc, Iw*Iw(t)=It*It=Tc*Tc=Sc*Sc, Ir*Ir(t)=It*It=Tc*Tc=Sc*Sc it follows from (0.19) that V˙0 with V˙=0 if and only if Sk(t)=Sk*(t),Ek(t)=Ek*,Ik(t)=Ik*,St=St*,Et=Et*,It=It*,Sn=Sn*,Sc=Sc*,Tn=Tn*,Tc=Tc*Sw=Sw*,Sr=sr*,Iw=Iw*,Ir=Ir*. This further implies that Rk(t)=ρrkIk*μk=Rk*,θRr*μr=Rr* since (Sk(t), Ek(t), Ik(t), Sw, Iw, Sr, Ir,) tends to (St*,Et*,It*,Sn*,Sc*),Tn*,Tc* as t → ∞. Therefore, LaSalle’s principle explains that the largest compact invariant subset of the set where V˙=0 is the endemic equilibrium point Ee* [43]. Hence, every solution in R approaches Ee* for R01, R02 > 1, and Ee* is globally asymptotically stable. For the full proof to theorem 3 see Appendix C.

Local stability of disease-free and endemic equilibrum

Theorem 4: The disease-free equilibrium point, π0, is locally asymptotically stable (LAS) if R01 < 1 and unstable if R01 > 1.

Theorem 5: The trypanosomosis model (0.1)(0.16) has a unique endemic equilibrium whenever R01, R02 > 1.

Remarks: It is worth mentioning that local stability of an equilibrium (situation) would imply existence of that situation for a short time (depending on certain circumstances or conditions). Whereas global stability would imply existence of a situation forever regardless of any condition. In summary, global stability of system (model) implies local stability, however, local stability of system does not imply global stability.

Numerical results

We illustrated the theoretical results established in this study and by considering initial conditions Sk(0) = 100, Ek(0) = 10, Ik(0) = 5, Rk(0) = 0, St(0) = 1000, Et(0) = 30, It(0) = 30, Sn(0) = 100, Sc(0) = 10, Tn(0) = 100 and Tc(0) = 10.

The graph-based behaviour of the cattle populations demonstrate that the susceptible cattle population reduced when infected tsetse flies, contaminated tabanids and stomoxyines, as well as wildlife populations, were present (Fig 3A). The size of the exposed cattle population decreases with progression to the infected group (Fig 3A). The decrease in the number of infected cattle contributes to the increase in number of recovered cattle (Fig 3B).

Fig 3. Behavioural conditions in different populations.

Fig 3

A. The behaviour of cattle population when R01 < 1. B. The behaviour of recovered cattle when R01 < 1. C. The behaviour of tsetse fly population when R01 < 1. D. The behaviour of infected cattle when the tabanid and stomoxyine population increase with abundant presence of wildlife populations.

The illustrated graph of the tsetse fly populations showed that the magnitude of susceptible tsetse fly decreases as a result of infection from infected cattle and the use of insecticide (Fig 3C). The magnitude of the exposed tsetse fly population decreases when they progressed to the infected group and as a result of the use of insecticide (Fig 3C). Finally, the population of infected tsetse flies reduced as a result of the use of insecticide (Fig 3C). A similar relationship holds for tabanid and stomoxyine populations. Cattle infected with T. vivax increase when the tabanid and stomoxyine populations increase with abundant presence of wildlife populations even when tsetse are absent (Fig 3D).

In cases where all the factors (cattle, wildlife, small ruminants, tsetse flies and biting flies) are present, there will be high prevalence of T. vivax, T. congolense and T. brucei (Fig 4A). The use of ITC and trypanocides could eliminate T. brucei completely, while T. vivax and T. congolense persists (Fig 4B). The presence of biting flies only could help increase T. vivax significantly in the cattle herd. The wildlife are expected to be left to maintain the ecosystem, while the presence of small ruminants could serve as reservoirs in the domestic cycle (Fig 4C). Even though some of them remain infected (wildlife and small ruminants), the absence of the transmitting vectors will help with a significant success in the elimination strategy.

Fig 4. Simulated situation of AAT in southwest Nigeria.

Fig 4

A. Areas with abundant tsetse flies, biting flies, cattle, small ruminants and wildlife, with a high prevalence of Trypanosoma spp. B. Absence of tsetse flies was depicted, but biting flies, cattle, small ruminants and wildlife present, the T. vivax is high. C. Absence of all the vectors when ITC and ITT is used along with trypanocides. There are still wildlife reservoirs and herds of cattle and small ruminants. Abbreiations: Tv- Trypanosoma vivax, Tc- Trypanosoma congolense, Tb- Trypanosoma brucei brucei

Field-reality model in southwest Nigeria

The field results showed that only 3% (approximately 585,000) of the national cattle population are domiciled in livestock farms in southwest Nigeria. Other livestock (abattoir and trade) are transported from the northern parts of the country. The results of the trypanosome DNA in cattle blood showed a prevalence of 23.8% with highest prevalence of T. vivax (13.0%) in the overall study [3]. The study reported highest prevalence of T. congolense (11.0%; 95%CI: 8.5-14.2) and T. vivax (14.7%; 95%CI: 11.0-19.5) in the wet and dry seasons, respectively. Further studies reported trapped vector flies with densities highest for stomoxyines, followed by tsetse flies and then tabanids [44]. Also, Trypanosoma species DNA were found in both the biological and mechanical vector flies with T. vivax prominent in the biting flies mechanical vector [31]. All these flies had their bloodmeals from either humans, cattle or wildlife. The wildlife observed from the bloodmeals of tsetse and biting flies included giraffe, hippopotamus, gazelle, spotted hyena and long-tailed rat [32]. However, the absence of T. b. gambiense in both cattle and humans in the study sites fits our predictive model. Meanwhile, bloodmeals from small ruminant sources were not detected. Hence, the stability model considers the vertebrate hosts (cattle, small ruminants and wildlife) based on their importance and the transmitting vectors (tsetse flies, tabanids and stomoxyines). A total of 93.9% (95% CI: 88.58-96.92) of livestock owners use trypanocides, while 60.5% (95% CI: 51.84-68.48) use insecticides (ITC only) without specific regimen [17]. Assessment of commonly used insecticides in the cattle herds showed improved results with restricted insecticidal application protocol (RAP)- in which insecticide application was limited to legs and belly) compared to the Fulani application approach (FAA)- insecticide application was applied based on the knowledge of farmers) [33]. Therefore, an elimination approach needs to consider improved insecticides (ITT) in both operational and adjacent areas in an integrated strategy to control AAT.

Control cost and implementation strategy

We estimated the cost for elimination of an isolated study area with Palpalis group of tsetse flies and biting flies to be between 599—1875 US$ / km2. However, to maintain barriers against reinvasion for the next five years, the cost could increase by 20—50%. However, if barriers are extended to larger areas for a longer period, the cost would increase further. The treatment of cattle in protected areas would be between 4—12 times, depending on the severity of the fly challenge from Glossina species and biting flies (S1 and S2 Tables). The price of trypanocides was estimated at US$ 1.67 for > 150 kg adult dose and delivery cost at US$ 5.56, bringing the cost per dose at US$ 0.036 / kg and thus US$ 28.9 per cattle / annum if administered quarterly. The cost could increase to US$ 115.6 / cattle / annum if trypanocides are administered monthly. Hence, if targeted areas are well-protected (traps, ITC, ITT), the trypanocide treatment would only be quarterly. The grand total of the project cost on vector fly suppression per annum was US$ 1,056,990.00, while US$ 16,906,500 would be spent on trypanocides to implement the strategic control of AAT in southwest Nigeria. The overall elimination costs was US$ 17,963,490 per annum in an area of 78,000 km2 of southwest Nigeria, in which elimination could be achieved within three years of consistent control measures. The total cost for both insecticides and trap cloths with miscellaneous cost was estimated at US$ 23,160; provided the traps were made locally to save cost. The cost of traps was US$ 2,640 at local cost (4 traps per km2), US$ 350 for ITC and US$ 23,160 for ITT. Contingency was 10% of total cost, while facility, administration and staff recruitment for the experiment covers an estimated 88% of the total cost. The overhead cost could increase considering other factors like workshops for local livestock owners and foreign exchange policies. Here, a 10% margin for error produced the results. Expendables for eliminating and monitoring baits were also reported (S1 and S2 Tables). To improve the success rate, the insecticidal approach (ITT) must be continuously maintained both within and outside the operational area. Barriers between the domestic and sylvatic areas need to be made active, while periodical assessment of cattle blood should be a routine practice. In the presence of vector flies, quarterly use of trypanocides and ITC on ruminants in a structured manner across the study areas need to be instituted.

Discussion

In this model, mathematical tools for investigating the conditions for control of AAT in western Africa were provided. Validation of the model was supported from field data and Tsetse Plan control methods. There was general improvement on previous models which considered tsetse flies (biological agent) as the only transmitting vector agent of trypanosomiasis. In fact, Rogers’ model expresses limitations as it does not consider biting flies in a field-based model because its importance relative to cyclical transmission has not been fully established in the field, which thereafter remained prototype for subsequent models [19, 27]. Notably, advances in mathematical biology over the years made selection of important variables possible and helped introduced several factors and hosts into a single model. Previous limitations on model formulations in which treatment of AAT in cattle herd was limited to trypanocides without considering insecticides and invasion from off-target infected areas [20], were addressed in this model. Importantly, the epidemiological data from southwest Nigeria were entered into the Tsetse Plan software to validate our constructed model for western Africa.

The random feeding of tsetse flies on a given host described earlier [19] was maintained in this model. Inclusion of a random feeding or interrupted feeding mechanism of biting flies was initiated in this model. The tabanids feeding were clearly female, while stomoxyines and tsetse flies involved both sexes. This study showed that the use of trypanocides coupled with ITC and ITT could help to control AAT in livestock herds. However, the model considers some areas in western Africa which had few or no tsetse flies present in which trypanocides are only given when cattle show signs of disease. Besides, either ITC or ITT was used, while in some instances they were rarely administered. The outcome of the model revealed extending baits to these areas and treating livestock with the same regimen as fly endemic areas could strategically improve the control. Here, we observed that T. vivax infection transmitted by both tsetse and biting flies would show R0>1, provided there are wildlife reservoir hosts present and abundant biting flies. It has long been reported that biting flies maintained T. vivax in cattle herd in areas with few or no tsetse flies [7]. During the hot dry season tsetse population reduces, however, there are abundant biting flies mechanically transmitting the disease, hence, T. vivax infection has been reported more often during the dry season [31]. Also, biting flies could develop resistance to commonly used insecticides in a geographical location based on quantity and frequency of use [33]. This resistance is less likely in tsetse flies because they are K-strategists, in which case they have low reproducing capacity with very high success rate [45].

We explained further in the model that if viable ITT are not in place, both in the targeted and adjacent areas, wildlife reservoirs could be a continuous source of infection to the livestock population from biting flies even when tsetse flies are absent. Furthermore, small ruminants in the SIR model revealed that in cases of sub-clinical infection, they could also act as reservoirs. The T. brucei situation in the model reflects the possibility of its elimination in cattle herds, because its prevalence generally has been low. Besides, even when blood meals are exclusively from wildlife reservoirs by both tsetse and biting flies, the use of ITC and trypanocides on only the cattle population is effective and results in R01 < 1 for T. b. brucei. This report corroborated the result from a previous model [20]. This is probably due to management practices such as transhumance, in which the animals are constantly exposed to both infected tsetse flies and biting flies during migration.

However, the use of trypanocides and ITC cannot completely eliminate T. congolense and T. vivax (which seems to be the current control approach in West Africa). A low rate of infection could still persist, but the inclusion of ITT in the control strategy will make R01 < 1. This could be more effective if the insecticide choice is effective for both tsetse flies and biting flies. There could also be a need for extensive traps and baits for the vector flies. The presence of infected wildlife reservoirs could increase the basic reproduction number, except where cattle are permanently kept in an intensive system under optimal control conditions (trypanocides, traps, ITC, ITT and physical barriers).

There are high densities of cattle and transmitting-vectors of AAT in the project area from the field-data, allowing reliance on the use of insecticide-treated cattle (RAP method) as the simplest and cheapest option in parts of the operational area. However, the use of artificial baits and targets (ITT) is expected in the parts where cattle do not visit. To be most cost effective, each of the cattle due for insecticide and trypanocide treatment must be given a dose of a recommended insecticide some 4—12 times per year, depending on the level of infection. In this study, the cost of vector suppression / elimination was estimated at between 599—1875 US$ / km2, which was slightly higher than estimated cost of 200—1500 US$ / km2 in Uganda [46]. Also the control costs in southwest Nigeria were more than those estimated for south-eastern Uganda [47]. This could be attributed to the number of livestock, management practices, manpower and density of flies. The insecticide used on cattle needs to be confirmed as acceptable to the national veterinary authorities to avoid insecticidal resistance and fly persistence, especially in biting flies [32]. It is expected that infected tsetse population would reduce due to the insecticide treatment, rather than the tsetse becoming infected through feeding. Hence, at the invasion front(s), where the cattle are liable to be challenged most often, the additional use of targets could deal with the greatest challenge. Besides, management practices such as pastoralism, nomadism and transhumance could have an effect in the model, and hence the frequency of ITC on fly control is essential in the control strategy.

Moreover, targets could be deployed in the invasion sources outside of the operational area, provided the baits are maintained at about 3 km2 into the invasion area, then invasion stops completely. This integrated approach will contain all the transmitting vectors and protect the main target which is the cattle. The total cost of eliminating AAT in southwest Nigeria based on the model from this study is economical considering the impact on the livestock industry and could serve as a template for other parts of Africa, except for regions where T. brucei rhodesiense is prominent, a factor not included in this model.

Our model showed that apart from tsetse flies which are biological vectors, biting flies remain major drivers in maintaining T. vivax in West Africa due to their abundance, persistence, resilience to seasonal variations, resistance to insecticides and high reproductive capacity. The prevalence of AAT in vertebrate hosts and vectorial capacity of biological and mechanical vector flies were important factors in the elimination approach. Meanwhile, the southwest Nigeria field model validates our theoretical model because all the biological and mechanical vectors were observed to harbour trypanosomes, in which our model showed that they have the potential to transmit the pathogen. Eliminating tsetse flies which are K-strategists (species with low reproduction rate) and highly susceptible to insecticides [45, 48, 49], may not necessarily eliminate the biting flies. Hence, more studies are needed on biting flies that could transmit trypanosomes from domestic vertebrates and reservoir hosts due to their interrupted feeding patterns, even when the biological vector is absent. Therefore, this model showed that there is a need to concentrate elimination programmes on all the fly vectors with transmission potentials, among other control plans, like the use of trypanocides and institutionalising barriers between domestic and sylvatic cycles.

Conclusion

The strategic insecticidal approach (ITC and ITT as recommended) with periodic use of trypanocides, and further establishment of barriers between the domestic and sylvatic cycle, will improve cattle population and complete elimination of AAT. With the aid of suitable Lyapunov functions, the stability of the equilibria was explored. It was concluded from the analyses and simulations that if the intervention parameters R0, R01 and R02 are <1, the spread of African animal trypanosomosis decreases and could be sufficiently controlled.

Appendix A: Proof of theorem 1

If the vertebrate hosts (cattle, small ruminants and wildlife) and invertebrate hosts (tsetse fly, stomoxyines, tabanids) population sizes are given by Nk(t) = Sk(t)+ Ek(t)+ Ik(t)+ Rk(t), Nr(t) = Sr(t)+ Ir(t)+ Rr(t), Nw(t) = Sw(t)+ Iw(t) Nt(t) = St(t)+ Et + It, Ns(t) = Sn(t)+ Sc and Nb(t) = Tn(t)+ Tc,. Then one see from (0.1)(0.16)

dNk(t)dtΛk-μkNk(t) (0.21)
dNtdtΛt-μtNt (0.22)
dNsdtΛs-μsNs (0.23)
dNbdtΛb-μbNs (0.24)
dNwdtΛw-μwNw (0.25)
dNrdtΛr-μbNr (0.26)

solving the differential inequalities (0.21)(0.25) and (0.26) one after the other gives

Nk(t)eμktNk(0)+Λkμkeμkt-Λkμk

so that

Nk(t)Nk(0)e-μkt+Λkμk-Λkμke-μkt

this implies

Nk(t)Λkμk(1-e-μkt)+Nk(0)e-μkt (0.27)

From (0.22)

Nt(t)eμttNt(0)+Λt(μteμtt-Λt(μt

so that

Nt(t)Nt(0)e-μtt+Λtμt-Λtμte-(μt+σt)t

this implies

Nt(t)Λtμt(1-e-(μtt)+Nt(0)e-μtt (0.28)

In a similar manner, Eqs (0.23)(0.25) and (0.26) gives

Ns(t)Λsμs(1-e-μst)+Ns(0)e-μst (0.29)
Nb(t)Λb(μb(1-e-(μb+δb)t)+Nb(0)e-μbt (0.30)
Nw(t)Λwμw(1-e-μbt)+Nw(0)e-μwt (0.31)
Nr(t)Λrμr(1-e-μrt)+Nr(0)e-μrt (0.32)

Taking the limits of (0.27)(0.32) as t → ∞ gives Nk(t)Λkμk, Nt(t)Λtμt, Ns(t)Λsμs, Nb(t)Λbμb,Λwμw,Λrμr,. Thus the following feasible region

R={Sk(t),Ek(t),Ik(t),Rk(t),St,Et,It,Sn,Sc,Tn,Tc,Sw,Iw,Sr,Ir,RrR16:Nk(t)Λkμk,Nt(t)Λtμt,Ns(t)Λsμs,Nb(t)Λbμb,Nw(t)Λwμw,Nr(t)Λrμr}

Appendix B: Proof of theorem 2

Consider the following linear Lyapunov function

F=αkEk(t)μtμbμs(αk+μk)(ρrk+τk+μk)+Ik(t)μtμbμs(rh(ai)+τk+μk)+Et(t)bτΛt+It(t)(γt+σt+μt)bγtΛt+Sc(t)(μs+δs)bΛs+Tc(t)(μb+δb)bΛb+Iw(t)μw+Ir(t)θ+ϕ+μr (0.33)

In what follows, the time derivative of F given by (0.33) along the solutions of the model (0.1)(0.16) yields

F˙=αkμtμbμs(αk+μk)(ρrk+τk+μk)+[bφSk(t)(It+Tc+Sc)-(αk+μk)Ek(t)]+αkEk(t)-(ρrk+τk+μk)Ik(t)μtμbμs(ρrk+τk+μk)+bφSk(t)(It+Tc+Sc)-(γt+σt+μt)Et(t)bΛtτ+(σt+μt)[γtEt(t)-(σt+μt)It(t)]bγtΛt+(μs+δs)[bα2Sn(Ik+Ir+Iw)-(μs+δs)Sc]bΛs+(μb+δb)[bα1Tn(Ik+Ir+Iw)-(μb+δb)Tc]bΛb+eω2bζ(It+Tc+Sc)-μwμwΛw+eω2bτ(It+Tc+Sc)-(θ+ϕ+μr)(θ+ϕ+μr) (0.34)

Further simplification of F˙ gives

F˙(σt+μt)(γt+σt+μt)(It+Tc+Sc)bγtΛtΛbΛs×[eω1+ω2(b2αkφτζφtΛkΛrΛwΛtΛsΛtαtα1α2μkμtμsμbμwμr(αk+μk)(ρrk+τk+μk)(γt+σt+μt)(σt+μt)(μb+δb)(μs+μs)(θ+ϕ+μ-r))-1]
F˙(σt+μt)(γt+σt+μt)bγtΛtΛbΛs(R01-1)(It+Tc+Sc)

F˙0 for R011.F˙=0 if and only if It(t) = Tc(t) = Sc(t) = 0. Further, one sees that (Sk(t),Ek(t),Ik(t),Rk(t),St(t),Et(t),It,Sn,Sc,Tn,Tc,Sw,Iw,Sr,Ir,Rr)π0=(Λkμk,0,0,0,Λtμt,0,0,Λsμs,0,Λbμb,0,Λwμw,0,Λrμr,0,0) as t → ∞ since (It, Tc, Sc → 0 as t → ∞. Consequently, the largest compact invariant set in {(Sk(t),Ek(t),Ik(t),Rk(t),St(t),Et(t),It(t),Sn(t),Sc,Tn,Tc,Sw,Iw,Sr,Ir,RrR:F˙=0} is a singleton {π0} and by LaSalle’s invariance principle [43], π0 is globally asymptotically stable in R if R01 ≤ 1.

Appendix C: Proof of theorem 3

Let R0>1, R01 > 1 and R02 > 1 so that a unique endemic equilibrium exists and consider the following nonlinear Lyapunov function defined by

V=Sk(t)-Sk*-Sk*ln(Sh(t)Sk*)+Ek(t)-Ek*-Ek*ln(Ek(t)Ek**)+(ρrk+τk+μk)τk[Ik(t)-Ik*-Ik*ln(Ik(t)Ik*)]+St-St*-St**ln(StSm*)+Et-Et*-Et*ln(EtEt*)+(σt+μt)σt[It-It*-It*ln(ItIt*)]+Sn-Sn*-Sn**ln(SnSn*)+(μs+δs)δs[Sc-Sc*-Sc*ln(ScSc*)]+Tn-Tn*-Tn**ln(TnTn*)+(μb+δb)δb[Tc-Tc*-Tc*ln(TcTc*)]+1μw[Iw(t)-Iw*-Iw*ln(Iw(t)Iw*)]+θ+ϕ+μrϕ[Ir(t)-Ir*-Ir*ln(Ir(t)Ir*)] (0.35)

The Lyapunov derivative of (0.35) is given by

V˙=Λk(1-Sk*Sk(t))-μkSk(t)(1-Sk*Sk(t))+bφSk*(It(t)+Tc(t)+Sc(t))-bφSk(t)Ek*(It(t)+Tc(t)+Sc(t))Ek(t)+(αk+μk)Ek*+(αk+μk)(ρrk+τk+μk)Ik(t)τk-(αk+μk)Ik*Ek(t)Ik(t)+(αk+μk)(ρrk+τk+μk)Ik*αk+Λt(1-St*St)-μtSt(1-St*St)+bφtSt(t)(Ik(t)+Iw(t)+Ir(t))-bφtStEt*(Ik(t)+Iw(t)+Ir(t))Et+(γt+μt+σt)Et*-(γt+μt+σt)(σt+μt)Itγt-(γt+μt+σt)It*EtIt+(γt+μt+σt)(σt+μt)It*αt+Λw(1-Sw*Sw(t))-μw(1-Sw*Sw(t))+bτeω1Sw(It+Tc+Sc)+Λr(1-Sr*Sr(t))-μr(1-Sr*Sr(t))+bζeω2Sr(It+Tc+Sc)+Λs(1-Sn*Sn(t))-μs(1-Sn*Sn(t))+bα2Sn(Ik+Iw+Ir)+Λb(1-Tn*Tn(t))-μb(1-Tn*Tn(t))+bα1Tn(Ik+Iw+Ir) (0.36)

At the endemic equilibrium, it is seen from (0.1)(0.16) that

Λk=bφSk*(It*+Tc*(t)+Sc*(t))+μkSk*αk+μk=bφSk*(It*+Tc*(t)+Sc*(t))Ek*ρrh+τk+μk=αkEk*Ik*Λt=bφtSt*(Ik*+Iw*+Ir*)+μtSt*γt+σt+μt=bφtSt*(Ik*+Iw*+Ir*)Et*σt+μt=γEt*It*Λw=eω1bτSw(It*+Sc*+Tc*)+μwΛr=eω2bζSr(It*+Sc*+Tc*)+μrΛs=bα2Sn(Ik*+Ir*+Iw*)+(μs+δs)Sn*Λs=bα1Tn(Ik*+Ir*+Iw*)+(μb+δb)Tn*} (0.37)

and using (0.37) in (0.36), and then add and subtract the following systematically bφSk*(It*)+Tc*(t)+Sc*(t)), bφtSt*(Ik*+Iw*+Ir*), bφkSk*Ik(t)(It*)+Tc*(t)+Sc*(t))2Ik*(It+Tc(t)+Sc(t)), bφtSt*It(Ik*+Iw*+Ir*)2It**(Ik+Iw+Ir), beω1τSw(It*)+Tc*(t)+Sc*(t)), beω2ζSr(It*)+Tc*(t)+Sc*(t)), beω1SwIw(It*)+Tc*(t)+Sc*(t))2Iw*(It(t)+Tc(t)+Sc(t)), beω2SrIr(It*)+Tc*(t)+Sc*(t))2Ir*(It(t)+Tc(t)+Sc(t)), bα2Sn(Ik*+Iw*+Ir*), bα1Tn(Ik*+Iw*+Ir*), bα2SnSc(Ik*+Iw*+Ir*)2Sc(Ik+Iw+Ir), bα1TnTc(Ik*+Iw*+Ir*)2Tc(Ik+Iw+Ir) one gets

V˙=μkSk*(2-Sk*Sk(t)-Sk(t)Sk*)+bφSk*(It*)+Tc*(t)+Sc*(t))×[4-Sk*)Sk(t)-Ek*Sk(t)ItTcScEk(t)Sk*)It*Tc*Sc*-Ik*Ek(t)Ik(t)Ek*-Ik(t)It*Tc*Sc*Ik*ItTcSc]+bφSk*(It+Tc+Sc)-bφSk*Ik(t)(It*)+Tc*(t)+Sc*(t))Ik*+bφSk*Ik(t)(It*)+Tc*(t)+Sc*(t))2Ik*(It)+Tc(t)+Sc(t))-bφSk*(It*)+Tc*(t)+Sc*(t))+μtSt*(2-St*St-StSt*)+bφtSt*(Ik*+Iw*+Ir*)×[4-St*St-Et*St(Ik+Iw+Ir)EtSt*(Ik*+Iw*+Ir*)-It*EtItEt*-(Ik*+Iw*+Ir*)ItIt*(Ik+Iw+Ir)(t)]+bφtSt*(Ik+Iw+Ir)-bφtSt*(Ik*+Iw*+Ir*)ItIt*+bφtSt*It(Ik*+Iw*+Ir*)2It*-bφtSt*(Ik*+Iw*+Ir*)+μwSw*(2-Sw*Sw(t)-Sw(t)Sw*)+beω1τSw*(It*)+Tc*(t)+Sc*(t))×[4-Sw*)Sw(t)-Sw(t)ItTcScSw*)It*Tc*Sc*-Iw*Iw(t)-Iw(t)It*Tc*Sc*Iw*ItTcSc]+μrSr*(2-Sr*Sr(t)-Sr(t)Sr*)+beω2ζSr*(It*)+Tc*(t)+Sc*(t))×[4-Sr*)Sr(t)-Sr(t)ItTcScSw*)It*Tc*Sc*-Ir*Ir(t)-Ir(t)It*Tc*Sc*Ir*ItTcSc]+μsSn*(2-Sn*Sn-SnSn*)+bα2St*(Ik*+Iw*+Ir*)×[4-Sn*Sn-Sn(Ik+Iw+Ir)Sn*(Ik*+Iw*+Ir*)-Sc*Sc-(Ik*+Iw*+Ir*)ScSc*(Ik+Iw+Ir)(t)]+μbTn*(2-Tn*Tn-TnTn*)+bα1Tn*(Ik*+Iw*+Ir*)×[4-Tn*Tn-Tn(Ik+Iw+Ir)Tn*(Ik*+Iw*+Ir*)-Tc*Tc-(Ik*+Iw*+Ir*)TcTc*(Ik+Iw+Ir)(t)]

simplify further, we have

V˙=-V1-V2-bφSk*(It*+Tc*+Sc*)[1-ItTcScIt*Tc*Sc*+Ik(t)Ik*-Ik(t)It*Tc*Sc*Ik*ItTcSc]-V3-V4-eω1bτSw(It+Tc+Sc)[1-ItTcScIt*Tc*Sc*+Iw(t)Iw*-Iw(t)It*Tc*Sc*Iw*ItTcSc]-v5-V6-eω2bζSr(It+Tc+Sc)[1-ItTcScIt*Tc*Sc*+Ir(t)Ir*-Ir(t)It*Tc*Sc*Ir*ItTcSc]-V7-V8-bφtSt(Ik+Iw+Ir)[1-IkIwIrIk*Iw*Ir*+ItTcScIt*Tc*Sc*-ItTcScIk*Iw*Ir*It*Tc*Sc*IkIwIr]-V9-V10-bα1Tn(Ik+Iw+Ir)[1-IkIwIrIk*Iw*Ir*+ItTcScIt*Tc*Sc*-ItTcScIk*Iw*Ir*It*Tc*Sc*IkIwIr]-V11-V12-bα2Sn(Ik+Iw+Ir)[1-IkIwIrIk*Iw*Ir*+ItTcScIt*Tc*Sc*-ItTcScIk*Iw*Ir*It*Tc*Sc*IkIwIr] (0.38)

where V1=(Sk*Sk(t)+Sk(t)Sk*-2), V2=bφSk*(It*)+Tc*(t)+Sc*(t))[Sk*)Sk(t)+Ek*Sk(t)ItTcScEk(t)Sk*)It*Tc*Sc*+Ik*Ek(t)Ik(t)Ek*+Ik(t)It*Tc*Sc*Ik*ItTcSc-4] V3=(St*St+StSt*-2), V4=bφtSt*(Ik*+Iw*+Ir*)[St*St+Et*St(Ik+Iw+Ir)EtSt*(Ik*+Iw*+Ir*)+It*EtItEt*+(Ik*+Iw*+Ir*)ItIt*(Ik+Iw+Ir)(t)-4], V5=(Sw*Sw(t)+Sw(t)Sw*-2), V6=beω1τSw*(It*)+Tc*(t)+Sc*(t))[Sw*)Sw(t)+Sw(t)ItTcScSw*)It*Tc*Sc*+Iw*Iw(t)+Iw(t)It*Tc*Sc*Iw*ItTcSc-4], V7=(Sr*Sr(t)+Sr(t)Sr*-2), V8=beω2ζSr*(It*)+Tc*(t)+Sc*(t))[Sr*)Sr(t)+Sr(t)ItTcScSw*)It*Tc*Sc*+Ir*Ir(t)+Ir(t)It*Tc*Sc*Ir*ItTcSc-4], v9=(2-Sn*Sn-SnSn*), V10=bα2St*(Ik*+Iw*+Ir*)[Sn*Sn+Sn(Ik+Iw+Ir)Sn*(Ik*+Iw*+Ir*)+Sc*Sc+(Ik*+Iw*+Ir*)ScSc*(Ik+Iw+Ir)(t)-4], V11=(2-Tn*Tn-TnTn*), V12=bα1Tn*(Ik*+Iw*+Ir*)[Tn*Tn+Tn(Ik+Iw+Ir)Tn*(Ik*+Iw*+Ir*)+Tc*Tc+(Ik*+Iw*+Ir*)TcTc*(Ik+Iw+Ir)(t)-4]

We need to show that Vi ≥ 0, Â i = 1, 2, …12,. In order to achieve this model, considering the arithmetic mean is greater than or equal to the geometric mean (AM—GM inequality), we have (Sk*)2+(Sk(t))2-2Sk*Sk(t)0 so that, (Sk*Sk(t)+Sk(t)Sk*-2)0. Hence, V1 ≥ 0. Further, let x=Sk*Sk(t), y=Ek*ItEk(t)It*, z=Ik*ItIk(t)It*. Then, bφSk*(It*)+Tc*(t)+Sc*(t))×[Sk*)Sk(t)+Ek*Sk(t)ItTcScEk(t)Sk*)It*Tc*Sc*+Ik*Ek(t)Ik(t)Ek*+Ik(t)It*Tc*Sc*Ik*ItTcSc-4] can be written as further algebraic manipulation gives

f(x,y,z)=x+yx+zy+1z-4 (0.39)

It is suffice to show that f(x, y, z)≥0. Since fx = fy = fz = 0 gives rise to x = y = z and that fxx > 0, fyy > 0, fzz > 0, one see that the minimum of f(x, y, z) is attainable at x = y = z. In what follows, (0.39) is reduced to (x − 1)2 ≥ 0 or (y − 1)2 ≥ 0 or (z − 1)2 ≥ 0 with equality if and only if x = 1 or y = 1 or z = 1 respectively. Hence, V2 ≥ 0. The proof of V3 ≥ 0 is similar to V1 ≥ 0 while that of V4 ≥ 0 is similar to V2 ≥ 0 and so on. Whenever Ik*Ik(t)=It*It=Tc*Tc=Sc*Sc, Iw*Iw(t)=It*It=Tc*Tc=Sc*Sc, Ir*Ir(t)=It*It=Tc*Tc=Sc*Sc it follows from (0.38) that V˙0 with V˙=0 if and only if Sk(t)=Sk*(t),Ek(t)=Ek*,Ik(t)=Ik*,St=St*,Et=Et*,It=It*,Sn=Sn*,Sc=Sc*,Tn=Tn*,Tc=Tc*Sw=Sw*,Sr=sr*,Iw=Iw*,Ir=Ir*. This further implies that Rk(t)=ρrkIk*μk=Rk*,θRr*μr=Rr* since (Sk(t), Ek(t), Ik(t), Sw, Iw, Sr, Ir,) tends to (St*,Et*,It*,Sn*,Sc*),Tn*,Tc* as t → ∞. Therefore, LaSalle’s principle explains that the largest compact invariant subset of the set where V˙=0 is the endemic equilibrium point Ee*. Hence, every solution in R approaches Ee* for R01, R02 > 1, and Ee* is globally asymptotically stable.

Supporting information

S1 Fig. Vegetation of operational and adjacent areas to be baited.

(PDF)

S2 Fig. Existing problems or adversities affecting vector flies in operational and adjacent areas to be baited.

(PDF)

S3 Fig. Pretreatment population in operational and adjacent areas to be baited.

(PDF)

S4 Fig. Total areas estimated to be baited.

(PDF)

S1 Table. Elimination cost of tsetse vector in southwest Nigeria.

(DOCX)

S2 Table. Elimination strategies for tsetse flies in cattle rearing areas of southwest Nigeria using the tsetse model approach.

(DOCX)

Acknowledgments

We appreciate Mr. Deji for designing the Nzi traps, Mr. Amidu for access to Fulani farm settlements and Mr Suleiman for providing cattle for insecticidal experiment. Gratitude to Ms Kehinde Omolabi for proof-reading this article. We appreciate Professor Glyn Vale and team members for designing Tsetse Plan, and making the software available.

Data Availability

All relevant data are within the paper and its Supporting information files.

Funding Statement

This study was supported by Commonwealth Scholarship Commission, United Kingdom. Paul O. Odeniran is a Commonwealth scholar, funded by the UK Government with reference number NGCN-2016-196. On our financial statement, I have submitted an application to PFA (PLOS Publication Fee Assistance), and the receipt of our application has been acknowledged.

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Decision Letter 0

Simon Clegg

22 Jul 2020

PONE-D-20-18752

Mathematical modelling and control of African animal trypanosomosis with interacting populations in West Africa- could biting flies be important in maintaining the disease endemicity?

PLOS ONE

Dear Dr. Odeniran,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

==============================

Many thanks for submitting your manuscript to PLOS One

It was reviewed by two experts in the field who have suggested some revisions be made prior to acceptance.

The reviewers also suggest a copy editing review for English language

If you could write a response to reviewers that will help to expedite revision upon resubmission

I wish you the best of luck with your revisions

Hope you are keeping safe and well in these difficult times

Thanks

Simon

==============================

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We look forward to receiving your revised manuscript.

Kind regards,

Simon Clegg, PhD

Academic Editor

PLOS ONE

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Partly

Reviewer #2: Partly

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: N/A

Reviewer #2: I Don't Know

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: No

Reviewer #2: No

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: 1. The manuscript should be revisited to improve language use. There are a number of confusing non-SVO formated sentences. Just to mention a few, see lines 26-28,39-41, 60-61, 73-76, 79-81, 104-106, 133-153, 180-194, 199-201, 207-210,222-231, 246-247 etc. There is also a great deal of terminology misuse! Just to mention a few; transmitting vectors [may be this means AAT biological and mechanical vectors]. As such some of the section headings e.g. lines 172-173 are equally not understandable

2. Abstract contains abbreviations that are not written in full first; ITT/ITC

3. The manuscript is incoherent with respect to the mathematical modeling, tsetse plan control and cost simulations and the prevalence studies. It is very hard to rationalize why this paper contains these three sections; these datasets and their implications on AAT transmission dynamics and control are not tied together.

4. Unless it is a peculiar AAT eco-epidemiological situation in Nigeria for which you need to provide references, sheep and goats suffer from clinical AAT. It is therefore surprising that they are classified together with wild animals and treated as mere reservoirs of AAT in this manuscript. Small ruminants should therefore be modeled as part of the AAT domestic cycle.

5. The expression for R_0 given on page 6 seems not to be coming from the proposed model. A citation for this expression should be provided. There is also no link between this expression and the proposed model.

6. Some equations on page 7 like (0.4) and (0.5) are missing the derivative sign

7. The model development indicates that tsetse flies get infected when feeding on infected cattle, wildlife and small ruminants (page 6, line 126). This is not reflected in the model. What I can see in the model is that tsetse flies get infection from infected cattle only. Basically the model needs to be revised. Adding a model diagram will also be helpful.

8. There is no derivation given for expressions of the basic reproduction numbers R_01 and R_02. On page 12 after equation (0.12), the authors indicate that the next generation matrix technique earlier described was used. The earlier description of this technique cannot be seen. This article can be used for this technique. Please refer to; *Van den Driessche, P., & Watmough, J. (2002). Reproduction numbers and sub-threshold endemic equilibria for compartmental models of disease transmission. Math. Biosci., 180, 29–48.

9. One page 5, line 114, the cattle variables are defined, the same should be done for the variables of other populations considered in the model for easy follow up. All model variables need to be defined.

10. Results for local stability of the disease-free equilibrium and endemic equilibrium are not shown. The following articles can assist in doing both local and global stability analysis of the disease-free and endemic equilibrium. Please refer to;

a) *Chavez, C. C., Feng, Z., & Huang, W. (2002). On the computation of R0 and its role on global stability. Mathematical Approaches for Emerging and Re-Emerging Infection Diseases: An Introduction. The IMA Volumes in Mathematics and Its Applications, 125, 31-65.

b) *McCluskey C. C.(2006), Lyapunov functions for tuberculosis models with fast and slow progression. Mathematical Biosciences and Engineering, 3(4), 603C614

c) *Korobeinikov A. (2004), Lyapunov functions and global properties for SEIR and SEIS epidemic models. Mathematical Medicine & Biology: A Journal of the IMA. 21(2)(2004).

d) Other similar publications on local and global stability analysis can be downloaded online.

11. For AAT, recovered animals become susceptible again. Additionally, an animal infected with T. b. brucei, for example, is susceptible to other trypanosome species. This has not been taken care of in the mathematical model

12. There is apparent lack of methods description with regard to both prevalence and tsetse plan [control options and their relative costs].

13. Presentation of results should be improved by only presenting the model outputs. All models and their parameterization should be presented in methods section. As well, the last section of results; lines 298-312 reads like methods and not results.

14. Insecticidal resistance is not known for tsetse; Tsetse are R-strategists [first paragraph of results section

15. Please quantify the effectiveness of ITC/ITT eluded in lines 239-240 and elsewhere in this manuscript

16. There are generic statements e.g. “ behavior of tsetse”, behavior of cattle, “the magnitude of the exposed cattle ….in lines 274-293 that render almost all that section impossible to comprehend

17. This MS treats tsetse and biting flies as equal vectors [mechanical or biological] without due regard to the type of AAT. T. brucei and T. congolense are biologically transmitted by tsetse and T. vivax by both mechanical and biological transmission! I don’t see this taken care of at model parameter description, setup and parameterization. As a result, numerical results presented in lines 274-293 don’t seem to make lots of epidemiological sense to me. Please also check that discussion lines 322-331, 340-359 make epidemiological sense. There are lots of inaccuracies presented in these lines.

18. Table 2; check that “whole fly” and “troublesome” make sense in the context of this MS

19. For Tables S1 and S2: Once you have provided a detailed methods section for these outputs, the results presented in these tables should give the reader an indication of the cost per animal per year [parasite control costs] or cost for vector control /km2 for a specified time needed for suppression or elimination. These costs should be discussed citing an existing body of knowledge about costs. The reader’s attention should be drawn to the methods of cost estimation deployed in tsetse plan to those implemented elsewhere before such costs can be compared.

Reviewer #2: I found it difficult to engage with the study, and I believe this is down in part to the structure of the paper and some missing information.

I will give a small number of examples.

In the Materials and Methods, the section on the Nigeria case study (starting on page 8) contains a lot of information which discusses previous work, without being clear what the study you are reporting on does in this area (either materials or methods). What is the tsetse software? and tsetse plan? How do they work? Are they the implementations of your model? Or are values derived from the model being fed into them to generate outputs? Does using this software validate the model in some way? Or extend it's outputs (eg into the economics or operational planning).

I have spent a lot of time going backwards and forwards trying to find bits of information, or where things were first described. Possibly my own fault for printing the paper rather than viewing on screen. However, “To obtain R0 for the the model (2.1)-(2.11), the next generation matrix technique earlier described were utilised” appear on page 12 but the only previous reference to next generation matrix technique is in the abstract. So if it is described it isn't clearly labelled as such.

The model equations are referenced in numerous places as (2.1)-(2.11), but in my copy of the manuscript the equations appear to be labelled (0.1)-(0.11).

There are a large number of grammatical and spelling mistakes, which I am unwilling to spend time on now given that the paper requires a substantial restructuring to separate material into its appropriate section and clarify how the different aspects of the study tie together. On next review, I would spend more time on the language.

**********

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Reviewer #2: No

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PLoS One. 2020 Nov 20;15(11):e0242435. doi: 10.1371/journal.pone.0242435.r002

Author response to Decision Letter 0


11 Aug 2020

Dear Editor,

Please we have attended to each of the responses from the reviewers below. We hope that this would be satisfactory.

Many thanks

Paul (Corresponding author).

Reviewer #1:

1. The manuscript should be revisited to improve language use. There are a number of confusing non-SVO formated sentences. Just to mention a few, see lines 26-28,39-41, 60-61, 73-76, 79-81, 104-106, 133-153, 180-194, 199-201, 207-210,222-231, 246-247 etc. There is also a great deal of terminology misuse! Just to mention a few; transmitting vectors [may be this means AAT biological and mechanical vectors]. As such some of the section headings e.g. lines 172-173 are equally not understandable

Response: We have corrected the grammatical languages as mentioned by the reviewers.

2. Abstract contains abbreviations that are not written in full first; ITT/ITC

Response: ITT/ITC- means insecticidal treated targets and insecticidal treated cattle. This has been included in the text.

3. The manuscript is incoherent with respect to the mathematical modeling, tsetse plan control and cost simulations and the prevalence studies. It is very hard to rationalize why this paper contains these three sections; these datasets and their implications on AAT transmission dynamics and control are not tied together.

Response: We have improved on the manuscript and also include an aspect in the discussion that reads “Our model showed that apart from tsetse flies which are biological vectors, biting flies remain major drivers in maintaining AAT in West Africa due to their abundance, persistence, resilience to seasonal variations, resistance to insecticides and high reproductive capacity. The prevalence of AAT in vertebrate host and vectoral capacity of biological and mechanical vector flies were important factors in elimination approach. Meanwhile, the southwest Nigeria field model validates our theoretical model because the all the biological and mechanical vectors were observed to harbour trypanosomes, in which our model showed that they have the potential to transmit the pathogen. Hence, eliminating tsetse flies which are K-strategist (species with low reproduction rate) and highly susceptible to insecticides [43, 44], may not necessarily eliminate the biting flies. Hence, more studies are needed on biting flies that could transmit trypanosomes from domestic vertebrates and reservoir hosts due to their interrupted feeding patterns, even when biological vector is absent. Therefore, this model showed that there is a need to concentrate elimination programmes on all the fly vectors with transmission potentials among other control plans like use of trypanocides and institutionalising barriers between domestic and sylvatic cycles”.

4. Unless it is a peculiar AAT eco-epidemiological situation in Nigeria for which you need to provide references, sheep and goats suffer from clinical AAT. It is therefore surprising that they are classified together with wild animals and treated as mere reservoirs of AAT in this manuscript. Small ruminants should therefore be modeled as part of the AAT domestic cycle.

Response: Small ruminants develop clinical AAT of heavy challenge of trypanosomes. In endemic region, small ruminants need to be treated to be in recovered class. Although, in the case of persistent, those in recovered class could return to susceptible class if exposed to trypanosome infection. Meanwhile, at subclinical level of trypanosome infection, they are thought to maintain the disease in the domestic cycle, serving as reservoirs for Trypanosoma species. These peculiar AAT eco-epidemiological situation in West Africa could largely be attributed to breed selection over the years. They rightly fit in SIR model, which has now been included in the work.

5. The expression for R_0 given on page 6 seems not to be coming from the proposed model. A citation for this expression should be provided. There is also no link between this expression and the proposed model.

Response: We have decided to develop an expression for R_0 in the model now.

6. Some equations on page 7 like (0.4) and (0.5) are missing the derivative sign

Response: The derivative sign has now been included as 〖dR〗_k/dt and 〖dS〗_t/dt in equation 0.4 and 0.5

7. The model development indicates that tsetse flies get infected when feeding on infected cattle, wildlife and small ruminants (page 6, line 126). This is not reflected in the model. What I can see in the model is that tsetse flies get infection from infected cattle only. Basically, the model needs to be revised. Adding a model diagram will also be helpful.

Response: Thank you for the observation. Additional models including infection of tsetse flies and biting flies from infected small ruminants and wildlife has been included (Equation 0.12 – 0.16). Moreover, we have included a schematic diagram for easy explanation of the model).

8. There is no derivation given for expressions of the basic reproduction numbers R_01 and R_02. On page 12 after equation (0.12), the authors indicate that the next generation matrix technique earlier described was used. The earlier description of this technique cannot be seen. This article can be used for this technique. Please refer to; *Van den Driessche, P., & Watmough, J. (2002). Reproduction numbers and sub-threshold endemic equilibria for compartmental models of disease transmission. Math. Biosci., 180, 29–48.

Response: We have shown the derivation and included the techniques of Diekmann et al., 1990 and Van den Driessche, P., and Watmough, J. (2002). These two authors have been cited, and the technique was applied to our model.

9. One page 5, line 114, the cattle variables are defined, the same should be done for the variables of other populations considered in the model for easy follow up. All model variables need to be defined.

Response: We have defined other variables e.g. small ruminants and wildlife properly.

10. Results for local stability of the disease-free equilibrium and endemic equilibrium are not shown. The following articles can assist in doing both local and global stability analysis of the disease-free and endemic equilibrium. Please refer to;

a) *Chavez, C. C., Feng, Z., & Huang, W. (2002). On the computation of R0 and its role on global stability. Mathematical Approaches for Emerging and Re-Emerging Infection Diseases: An Introduction. The IMA Volumes in Mathematics and Its Applications, 125, 31-65.

b) *McCluskey C. C.(2006), Lyapunov functions for tuberculosis models with fast and slow progression. Mathematical Biosciences and Engineering, 3(4), 603C614

c) *Korobeinikov A. (2004), Lyapunov functions and global properties for SEIR and SEIS epidemic models. Mathematical Medicine & Biology: A Journal of the IMA. 21(2)(2004).

d) Other similar publications on local and global stability analysis can be downloaded online.

Local stability of an equilibrium would imply existence of that situation only for a short time (depending on certain circumstances or conditions). Whereas, global stability would imply existence of a situation regardless of any condition. For example, 1. If an endemic equilibrium is globally stable, it would imply that in the long run, the disease prevails (i.e. it is not cured- it becomes endemic- it is not eliminated) 2. If a disease-free equilibrium is globally stable it would imply that the disease finally dies out. 3. If a disease-free equilibrium is locally stable, it would imply that the disease would be eliminated (provided that certain conditions are met or for a short time depending on certain conditions). Mathematically, when global stability is performed, there is no need to perform local stability. However, in our-build-up on the global stability analyses of disease-free and endemic equilibrium, we have stated the local stability of disease-free and endemic equilibrium theorem, which implies the stability. We have also cited the suggested authors.

11. For AAT, recovered animals become susceptible again. Additionally, an animal infected with T. b. brucei, for example, is susceptible to other trypanosome species. This has not been taken care of in the mathematical model

Response: Thank you for your response. The model illustrates how the recovered class could become susceptible again. We have indicated it properly in the diagram (Fig 1). If an animal is infected with T. b. brucei and also susceptible to other trypanosome species, the recovery route is very essential. For instance, if infected animal is treated with trypanocide, the drug protects it from getting infected to other species within the protective period. We have explained this properly in the work.

12. There is apparent lack of methods description with regard to both prevalence and tsetse plan [control options and their relative costs].

Response: The methods on prevalence studies and control plans (which incorporated relative costs) have been properly explained.

13. Presentation of results should be improved by only presenting the model outputs. All models and their parameterization should be presented in methods section. As well, the last section of results; lines 298-312 reads like methods and not results.

Response: All models and parameterization have now been moved to the method section. The last section of the results on budgeting and compiling final report has been improved upon and now reads like results.

14. Insecticidal resistance is not known for tsetse; Tsetse are R-strategists [first paragraph of results section.

Response: The insecticide resistance was meant for biting flies which could pose continuous challenge of trypanosome infections. Tsetse are K-strategists, which have been properly explained in the last paragraph of the discussion.

15. Please quantify the effectiveness of ITC/ITT eluded in lines 239-240 and elsewhere in this manuscript.

Response: We have explained the differences in effectiveness of ITC/ITT in the manuscript. It has been recast thus “Due to pastoralism and nomadism management system widely practised in West Africa, ITC is very effective because livestock farmers move their animals around for grazing. For ITT, beyond the target animals were considered, in which the vector fly populations of adjacent areas were also targeted. This is an effective method in elimination strategy, it also targets flies within and without target areas. It is most effective in areas where zero-grazing is practised. The use of ITC was more effective than ITT which affected the feeding tsetse and other biting flies, largely because of management practices”.

16. There are generic statements e.g. “behavior of tsetse”, behavior of cattle, “the magnitude of the exposed cattle ….in lines 274-293 that render almost all that section impossible to comprehend.

Response: The word behaviour is attributed to the graph-based representation, while magnitude expresses the size number of the object in mathematics. We have explained this at the first mention for the readers.

17. This MS treats tsetse and biting flies as equal vectors [mechanical or biological] without due regard to the type of AAT. T. brucei and T. congolense are biologically transmitted by tsetse and T. vivax by both mechanical and biological transmission! I don’t see this taken care of at model parameter description, setup and parameterization. As a result, numerical results presented in lines 274-293 don’t seem to make lots of epidemiological sense to me. Please also check that discussion lines 322-331, 340-359 make epidemiological sense. There are lots of inaccuracies presented in these lines.

Response: We have improved the discussion. We earlier stated that contaminated biting flies only transmit T. vivax.

18. Table 2; check that “whole fly” and “troublesome” make sense in the context of this MS

Response: We have removed the whole fly and corrected troublesome to trypanosome.

19. For Tables S1 and S2: Once you have provided a detailed methods section for these outputs, the results presented in these tables should give the reader an indication of the cost per animal per year [parasite control costs] or cost for vector control /km2 for a specified time needed for suppression or elimination. These costs should be discussed citing an existing body of knowledge about costs. The reader’s attention should be drawn to the methods of cost estimation deployed in tsetse plan to those implemented elsewhere before such costs can be compared.

Response: This has been included in the method section, “The cost analyses is technique dependent. In this study two viable techniques in West Africa considered in the model were trapping, ITC and ITT. In cases of animal movement where sufficient livestock are present for ITC, insecticides are often applied by spraying (RAP has been cost effective) or pour on. The cost of traps is relatively high (not necessarily the cost of acquiring the traps), because of the cost of manpower required for deployment which is dependent on density. Notably, the targeted vector flies were Glossina species and biting flies, which means that combination of techniques were required”.

The result section has also been updated with “We observed the cost for elimination of an isolated study area with Palpalis group of tsetse flies and biting flies to cost between 599 - 1875 US$ / km2. However, to maintain barriers against reinvasion for the next five years, the cost could add between 20 - 50% to the original cost. Meanwhile, if barriers are extended to larger areas for longer period, cost would increase further. The treatment of cattle in protected areas would be between 4 - 12 times in fly belt zones, depending on the severity of fly challenge from Glossina species and biting flies (S1 Table and S2 Table). The price of trypanocides was estimated at US$ 1.67 for >150 kg adult dose and delivery cost at US$ 5.56, bringing the cost per dose at US$ 0.036 / kg and thus US$ 28.9 per cattle / annum if administered quarterly. The cost could increase to US$ 115.6 / cattle / annum if trypanocides are administered monthly. Hence, if targeted areas are well-protected (traps, ITC, ITT), the trypanocide treatment would only be quarterly”.

In the discussion, the work of Shaw, 2009 has been referenced and compared with the findings on the cost analysis.

Reviewer #2: I found it difficult to engage with the study, and I believe this is down in part to the structure of the paper and some missing information.

I will give a small number of examples.

In the Materials and Methods, the section on the Nigeria case study (starting on page 8) contains a lot of information which discusses previous work, without being clear what the study you are reporting on does in this area (either materials or methods). What is the tsetse software? and tsetse plan? How do they work? Are they the implementations of your model? Or are values derived from the model being fed into them to generate outputs? Does using this software validate the model in some way? Or extend it's outputs (eg into the economics or operational planning).

Response: We have greatly improved the materials and methods, results and discussion sections. The prevalence of AAT in vertebrate host and vectoral capacity of biological and mechanical vector flies were important factors in elimination approach. Meanwhile, the southwest Nigeria field model validates our theoretical model because the all the biological and mechanical vectors were observed to harbour trypanosomes, in which our model showed that they have the potential to transmit the pathogen. The values from southwest Nigeria were entered in out Tsetse Plan software which automatically generates the scenario. Some of these field data were also important in our mathematical model. The whole concept was to validate our model with the field data to develop the best control approach.

I have spent a lot of time going backwards and forwards trying to find bits of information, or where things were first described. Possibly my own fault for printing the paper rather than viewing on screen. However, “To obtain R0 for the the model (2.1)-(2.11), the next generation matrix technique earlier described were utilised” appear on page 12 but the only previous reference to next generation matrix technique is in the abstract. So if it is described it isn't clearly labelled as such.

Response: The derivation of the next generation matrix has been improved upon and clearly stated. Many thanks

The model equations are referenced in numerous places as (2.1)-(2.11), but in my copy of the manuscript the equations appear to be labelled (0.1)-(0.11).

Response: Many thanks for the observation. We have corrected the labelling now.

There are a large number of grammatical and spelling mistakes, which I am unwilling to spend time on now given that the paper requires a substantial restructuring to separate material into its appropriate section and clarify how the different aspects of the study tie together. On next review, I would spend more time on the language.

Response: Many thanks for offering to help with the language. We will appreciate that. We also gave it to native English speakers for review to minimise the spelling mistakes.

Attachment

Submitted filename: Response to the reviewers.docx

Decision Letter 1

Simon Clegg

22 Sep 2020

PONE-D-20-18752R1

Mathematical modelling and control of African animal trypanosomosis with interacting populations in West Africa- could biting flies be important in maintaining the disease endemicity?

PLOS ONE

Dear Dr. Odeniran

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

==============================

Many thanks for submitting your manuscript to PLOS One

It was reviewed by same two experts in the field who reviewed your original submission, and they have suggested some modifications be made prior to acceptance.

If you could write a response to reviewers, that will expedite review upon resubmission

I wish you the best of luck with your revisions

Hope you are keeping safe and well in these difficult times

Thanks

Simon

==============================

Please submit your revised manuscript by Nov 06 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols

We look forward to receiving your revised manuscript.

Kind regards,

Simon Clegg, PhD

Academic Editor

PLOS ONE

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: (No Response)

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Partly

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: I Don't Know

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: No

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: -Please consider rewriting sentences in lines 42, 67-70, 74, 191, 283, 425, 474-476, 493, 486, 497 for clarity. These sentences dont read fine to me

-fly insecticide resistance referred to in line 77 should be changed to biting flies insecticide resistance.... Insecticide resistance is not an issue for tsetse flies

-provide a table legend for table 1 explaining methods for parameter estimation in all instances where parameters were estimated

-Lines 199-205: please provide appropriate references to support the assumptions therein

-Line 219: ...moleculary...What do the authors mean here? which molecular techniques are these?

-Lines 220221-----highest prevalences of T.congolense and T.vivax...Provide these prevalence estimates in brackets after each trypanosome category

-Line 236...((FAA)... change to .....(FAA)

-Lines 405-406: Please provide a denominator for each of these costs. Overall elimination costs should be stated with the size of the operation area and the number of years it would take to achieve elimination

-Lines 463-464; provide an explanation why this is the case

-Lines 480-481: please give an explanation of how different livestock numbers, manpower etc are between Eastern uganda and West Nigeria

-Make sure that the colours used in the tsetse plan figures are the exact colours provided in the figure keys. Figures 2 and 3 seem to have discrepancies in the colours used and those provided in the figure keys.

Reviewer #2: The manuscript is a big improvement on the previous version. However, it still requires considerable work to improve clarity and make it publishable.

The actual structure of the study is unclear, and how the three components (the modelling, field work and the Tsetse Plan runs) tie together, how each informs the other. There are no citations for the Tsetse Plan software.

There is no consideration of variability in the parameters of the model (or used in other steps) - no sensitivity analysis or sampling of parameters. I acknowledge that this paper is the initial development of the model and maybe this will come in later publications, but it should be acknowledged and discussed rather than presenting the outcomes as definitive answers.

Is there evidence that tsetse flies are not required to maintain trypanosome populations? Are there no stages of the lifecycle that require this biological vector? Otherwise, removal of tsetse would result in removal of disease even if biting flies were present (although maybe with some lag).

I have made quite a few suggestions for minor changes in the attachment, however a more thorough re-write would still be appropriate.

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Reviewer #2: No

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Attachment

Submitted filename: rereview.pdf

PLoS One. 2020 Nov 20;15(11):e0242435. doi: 10.1371/journal.pone.0242435.r004

Author response to Decision Letter 1


18 Oct 2020

Mathematical modelling and control of African animal trypanosomosis with interacting populations in West Africa- could biting flies be important in maintaining the disease endemicity?

Abstract

p.2, l.24 and l.46 trypanosomosis and trypansomiasis used, I’d choose one and stick to it. If you there is a reason for using trypanosomiasis in the keywords, why not use it everywhere?

Response- We have used trypanosomosis all through the manuscript.

p.2, l.26 assuming that AAT is regarded as a single disease despite the multiple causative agents, change ‘AAT...are a major threat...’ to ‘AAT...is a major threat...’

Response- Correction has been made as suggested by the reviewer.

p.2, l.33 change ‘...solving the system of the ordinary...’ to ‘...solving the system of ordinary...’

Response- We have corrected the sentence.

p.2, l.34 I don’t understand how R0 < 1 means you have to control the vectors, doesn’t R0 < 1 mean the disease is dying out? I think this part of the abstract is maybe just confused, or lacking some context?

Response- We have corrected the sentence as “The R0 < 1 in the formulated model indicates the elimination of AAT.”

p.2, l.42 change ‘individual or together’ to ‘individually or together’

Response- It has been corrected to individually or together

Introduction

p.3, l.52 ‘There are other trypanosome species which are also of significant importance to the livestock herd such as T. evansi and T. simiae.’ Are these species being ignored in the modelling? Or are all trypanosomes being handled together? in which case I’m not clear why these are differentiated in the text from the ‘major’ three. Having seen p.4, l.99, I would drop this sentence entirely, being so prominent at the start of the introduction it merely raises questions about something you aren’t interested in here.

Response- The parasites considered in the model were T. congolense, T. vivax and T. brucei brucei has observed by the reviewer.

p.3, l.58 delete ‘Generally,’ and delete ‘annual’

Response- It has been corrected.

p.3, l.60 I think Tabanidae and Muscidae are families, not genera.

Response- Many thanks. It has been changed to families

p.3, l.61 ‘AAT thresholds in various homesteads’, I’m not sure about the use of ‘thresholds’ here, maybe ‘levels’ would be better.

Response- Thresholds has been replaced with levels

p.3, l.62 change ‘...free of tsetse files, where biting flies...’ to ‘...free of tsetse files but where biting flies...’

Response- The word “where” has been included in the sentence.

p.3, l.67 change ‘Changes in vector distribution map...’ to ‘Changes to the vector distribution map...’

Response- It has been corrected to “Changes to the vector distribution map”

p.4, l.78 change ‘...areas are struggling...’ to ‘...areas is struggling...’

Response- It has been corrected to “ . . . areas is struggling”. . .

p.4, l.81-83 Do they consider biting flies at all? If not, I’d suggest something more like ‘Existing predictive models of African animal trypanosomiasis only consider the biological vectors Glossina spp., ignoring the possible importance of mechanical vectors [19,20,21,22]’.

Response- The sentence has been corrected to “Existing predictive models of African animal trypanosomiasis only consider the biological vectors Glossina spp., ignoring the possible importance of mechanical vectors [19,20,21,22]”.

p.4, l.85 some examples of programmes ignoring biting flies and, if there are any, programmes accounting for them would strengthen this. I don’t know, but I would guess that no programmes actively seek to eliminate biting flies, but the use of (eg) sprayed insecticides may impact on them as well as the tsetse.

Response- Programmes like sterile insect techniques, aerial spraying of insecticides along tsetse pockets (e.g. north-eastern Nigeria in 1967, 1500 km area in Lafia, Nasarawa State in Nigeria in the 1980s), excluded biting flies and only targeted tsetse flies. These examples (SIT and selective aerial spraying) have been included in the text.

p.4, l.87 And the significance of the variation in daily routines for control is what?

Response- The significance of variation in daily routines for control is the indirect impact on resistance to insecticides by these set of flies.

p.4, l.91 the models left knowledge gaps? Or the models suffered as a result of knowledge gaps? I suspect the latter, but I think the sentence implies the former.

Response- The sentence has been modified to mean that AAT models had suffered as a result of knowledge gaps.

p.4, l.99+ I’m not sure about this last paragraph. Partly because I’m not clear that this is what has been done in the study, I don’t see how you’ve evaluated the possibility of the model (I presume you would mean the probability of the model?).

Response- The sentence has been modified to "We also evaluated the probability of the model in the preliminary report conducted in southwest Nigeria and explained the reality of its elimination".

Materials and Methods

p.5, l.112 This is the first reference to bovine trypanosomosis. Why not stick to AAT throughout the manuscript (but making it clear in the intro that your primary interest is in the impact on the the cattle industry)? Do the wildlife and ruminant hosts not get the disease too?

Response- In line 11-112, we have modified the sentence to read "The model targets cattle, being mostly affected and having serious impact on food security in Africa". Each subsection introduces the host(s) considered in the model.

p.5, l.115-6 change ‘...the cattle input rate of new individuals entering the population. μk and τk are the...’ to ‘...the rate of new individuals entering the population, while μk and τk are the...’

Response- The sentence has been corrected to “the rate of new individuals entering the population, while μk and τk are the...” as suggested by the reviewer.

p.5, l.117 there are a lot of new terms in here, you should be referencing the table in which all these parameters are defined.

Response- We have referenced Table 1 for the parameters

p.6, l.126 do you mean ‘domestic livestock cycle’ rather than ‘domestic cycle’?

Response- Many thanks. We have corrected it to domestic livestock cycle.

p.6, l.126 sentence beginning ‘This peculiar...’, is there evidence to support this? If so reference it, but maybe in the introduction rather then M&M, alternatively if this is an hypothesis I don’t think it should be here. Does it mean that the choice of breeds for use in West Africa results in this situation?

Response- African dwarf breeds of goats and sheep are trypanotolerant compared to some other breeds. Most owners that raise them at subsistence level do not know of trypanosomosis because infection is majorly at subclinical level. However, they do come down to infection when the parasitaemia is high. Hence, we have referenced Isaac et al., 2017. For further reading, Behnke et al., 2011.

Are the cattle and ruminant breeds used elsewhere in Africa very different? Do they not support trypanosomes? This sentence seems out of place here.

Response- Breed selection is an important control strategy for AAT. There are some breeds (Zebu breeds of cattle) that are more susceptible than others (Taurine breeds). All are raised in Africa, over time breed selection is important in areas of heavy tsetse challenge.

p.6, l.132 and l.141 again there are new undefined parameters, refer to the appropriate table of definitions.

Response- The parameters have now been referenced as table 1

p.7, l.157 change ‘climatic dependent’ to ‘climate-dependent’

Response- It has been corrected.

p.12, l.200 change ‘...treated cattle...’ to ‘...treating cattle...’

Response- It has been corrected.

p.12, l.199 sentence beginning ‘Already infected...’ I don’t fully understand this sentence, but I’m sure there is something wrong with it, may just be the structure of it makes it unclear.

Response- The sentence has now been modified, beginning with “Infected cattle are moved to the recovered class. . .”

p.12, l.202 what is a trypanocides safety period?

Response- It has been corrected to trypanocides withdrawal period.

p.12, l.211 The tsetse software is Tsetse Plan? If so, use this name and stick to it. Is this the Tsetse

Plan software available from Tsetse.org? Please provide a reference to the software being used, unless it is bespoke, in-house software in which case you should write more about it – here or in the Supplementary material.

Response- Yes, it is Tsetse Plan available from tsetse.org. We have given details on the software.

p.12, l.211 this heading, with a bracketed alternative heading, reads like you couldn’t decide what to call this section. And I’m struggling to think of a suitable heading that covers both parts (a) experimental and (b) Tsetse Plan evaluation. There is a lot in this section that looks like results and discussion of an experiment, but this is still the M&M section. Here you shoud be saying what you are doing (and maybe just mentioning any result that eg provides a parameter for your model), then have a corresponding section in the Results to present the outputs. I’m not clear that what is done in this section validates your model as stated.

Response- This section has been renamed “Assessment of control strategy in southwest Nigeria using Tsetse Plan”. A result section has been created, and all data values and results have been moved appropriately. This section explains how the field and experimental work were done, the generated results were used to create a field scenario in the Tsetse Plan to inform the best control strategies for elimination, including the cost. However, in the mathematical model, apart from using some of the field values, we analysed the probability and correctness by incorporating all the interacting populations involved (vertebrate host- cattle, small ruminants and wildlife, tsetse flies, biting flies- Stomoxys and tabanids and the parasites- T. vivax, T. congolense and T. b. brucei) using different mathematical tools. Our numerical analyses provide the best control approach (combining the field report, experimental results and Tsetse Plan reports) and suggesting likely outcomes of AAT situation if some measures are instituted

p.13, l.219 I would change ‘screened molecularly’ to ‘screened for trypanosome DNA’ as (a) there could be other types of molecular screens and (b) the reader should not have to look up the reference to get that basic information.

Response- It has been corrected to ‘screened for trypanosome DNA’

p.13, l.237 Sentence ‘Therefore, an elimination approach...to control AAT inputs into Tsetse Plan’. Isn’t the goal of an elimination approach elimination, rather than provision of inputs to Tsetse Plan? Rewrite.

Response- It has been corrected to "Therefore, an elimination approach needs to consider approved insecticides (ITT) in both operational and adjacent areas in an integrated strategy to control AAT". We have moved this section to the results.

p.13, l.243 ‘The population density of the tsetse species was assumed to be medium from the overall report’ I assume medium is a setting in the tsetse plan software, but what does it mean as a density? 10 flies per km2? 100000?

Response- From the field work, we observed that the number of tsetse per square kilometre is estimated to be around 300 - 1000. This means that the density class in the input stage of the Tsetse Plan is categorised as medium. It also indicates that using Nzi traps without odour with average daily catches of both sexes ranging between 3-10 flies.

p.13, l.240 I think this paragraph is listing settings used for the Tsetse Plan software. How about a table accompanied by a more succinct statement highlighting those of most interest?

Response- We have improved this section as suggested by the reviewer.

p.13, l251 sentence beginning ‘Wildlife is...’ does this indicate very low wildlife reservoirs? Only if the grazing areas and wildlife-free areas are more-or-less the same ones. If all the 70km2 are grazing that means there could be a considerable wildlife reservoir in 30km2, couldn’t there? Or am I misreading what is there?

Response- The 30 km2 area that do only contain approximately five wildlife population. This means that the density is low. Besides, ruminants do not graze in most of these areas.

p.14-15 I’m struggling to see how the use of Tsetse Plan or the experiment validates your model. The experimental portion provides support for inclusion of biting flies, and provides parameter estimates as inputs to your model, but beyond that I’m confused. And also about how all of this is materials and methods. I’d like to see some kind of schema that explains how your model, the experiment and the Tsetse Plan run(s) link together (what data, parameters etc go from one part to another).

Response- We have included a brief statement on the linkages between the field/experimental, Tsetse Plan and the mathematical model provide the results and conclusion of this work. While Tsetse Plan gives the results on implementation and cost control directly from the field scenario in southwest Nigeria, mathematical model provides a more holistic result on elimination of the disease in West Africa.

Results

p.17, l.303 doesn’t the probability of a fly surviving a feed involve the probability it feeds on an untreated host too? And that sentence need rewriting, eg what is ‘feeds off and on treated hosts’?

Response- We have rephrased the sentence, it is now written as "The probability of vector fly surviving a feed is therefore, the product of the probabilities it feeds on untreated hosts and feeds on treated hosts and survives that meal".

p.17, l.304 did you predict or assume that flies feed off all cattle at random?

Response- The word predicted as been changed to assumed.

p.17, l.305 change ‘...systems widely...’ to ‘...systems being widely...’

Response- It has been corrected.

p.20, (no line given) rewrite the two lines beginning ‘In areas where...’, I don’t get what the bracket is about, there is is a subscript that isn’t fully subscripted and the biting flies are abundant (I think).

Response- The section has been corrected and written as “In areas where tsetse flies were absent (T. vivax showed R02 > 1 in the cattle population, when infected wildlife hosts are present), and biting flies (tabanids and stomoxyines) are abundant, the basic reproduction number of AAT increases”.

p.21, l.319 Does the mathematical model confirm the field-data? Didn’t the field-data inform the construction of the mathematical model? This seems a bit circular to me.

Response- We have corrected this sentence. It is now written as “The field-data from southwest Nigeria entered for the mathematical model generated valuable results applicable to West African countries”.

p.21, l.324? Remove inserted.

Response- It has been removed.

p.21, l.325? Remove significantly.

Response- It has been removed.

p.21, l.?? change ‘...poses a risk on...’ to ‘...poses a risk to...’. I don’t think I understand the whole of that sentence ‘The possibility of continuous treatment...’, it is unclear to me what the risk to the herd is from treatment in the presence of infected vectors, please clarify.

Response- The risk here referred to trypanocide resistance risk. We have modified the sentence as “The possibility of continuous trypanocide treatment in the presence of infected vector flies poses trypanocide resistance risk to the cattle herd”. Many thanks

p.22, l.327 I assume that there is no requirement in the trypanosome lifecycle to pass through a biological, rather than just mechanical, vector? The lifecycle stages that take place in tsetse can occur just as well elsewhere? Any evidence to support this?

Response- Yes, if the mechanical vectors are present, some species of trypanosomes such as T. vivax can be transmitted without tsetse flies. We have included examples, “For instance, T. vivax has managed to maintain itself in South America where tsetse flies are absent, with Tabanidae and Stomoxys acting as mechanical vectors [Reis et al., 2019]. Similarly, Anene et al. [7] observed that T. vivax was maintained in the flock by tabanids in tsetse-free areas in Nigeria”.

p.23, l.334 change ‘It is suffice...’ to ‘It is sufficient...’

Response- It has been corrected.

p.23, l.336 is (0.20) an acceptable equation reference in PLOS One? It looks ugly to me, shouldn’t it at least be preceded by eq. or equation?

Response- We have included the word “equation”. Now written as (equation 0.20).

p.24, l.360 change ‘...that susceptible...’ to ‘...that the susceptible...’

Response- It has been corrected.

p.24 The two paragraphs that begin ‘The graph-based behaviour...’, could they be rewritten in such a way as to make differentiate them from one another a bit more. They are very repetitive.

Response- We have modified the second “graph-based behaviour” line to avoid repetition. It is now written as “The illustrated graph of the tsetse fly populations showed that the magnitude of susceptible tsetse fly decreases as a result of infection from infected cattle and the use of insecticide (Fig 3C)”.

Fig. 3 I can’t see a legend so it is unclear what lines refer to what.

Response- The legend has been inserted.

p.26, l.397 change ‘We observed...’ to be ‘We estimated...’

Response- It has been corrected.

p.26, l.399 change ‘Meanwhile, if...’ to ‘However, if…’

Response- It has been corrected.

p.26, l.400 change ‘...for longer period, cost...’ to ‘...for a longer period, the cost...’

Response- It has been corrected.

p.26, l.401 this is the first (and only?) reference to ‘fly belt zones’ I would recommend avoiding introducing additional terminology at this late point in the paper. You must have described the areas inhabited by flies earlier, reuse that nomenclature.

Response- We have removed the word “fly belt zone” at this point as suggested by the reviewer. Many thanks.

p.26 The final three sentences on this page, do the all relate to measures to improve the success rate score? It reads as if the first does and then the other two are things that were also done, they should form more of a list. And what does the success rate score of 70% in Tsetse Plan mean?

Response- We have improved these sentences to avoid ambiguity. It now reads, “To improve the success rate, the insecticidal approach (ITT) must be continuously maintained both within and outside the operational area. Barriers between the domestic and sylvatic areas need to be made active, while periodical assessment of cattle blood should be a routine practice. In the presence of vector flies, quarterly use of trypanocides and ITC on ruminants in a structured manner across the study areas need to be instituted”.

Discussion

p.27, l.424 spelling ‘conditions’

Response- It has been corrected.

p.27, l.425 spelling ‘Tsetse’

Response- It has been corrected.

p.27, l.427 sentence beginning ‘In fact, Rogers...’ needs rewriting. I haven’t read the reference, but is it the model or the paper that expresses a limitation? And by this do they mean difficulty of including biting flies in the model? The sentence is unclear. I think, and I’m guessing at the meaning a bit, that it something like ‘The model of Rogers [19], which was the prototype of subsequent models, omitted biting flies because of the difficulties of including them’ or maybe ‘including them reliably’ if the problem is one of parameterising the models.

Response- We have improved the sentence to enhance the understanding of our readers. It now reads, “In fact, Rogers model expresses limitation of considering biting flies in a field-based model because its importance relative to cyclical transmission has not been fully established in the field as at then, which thereafter remained prototype for subsequent models [19,27]”. This was established in the discussion section (third paragraph, page 210) of Rogers’ model.

p.27, l. 430 change ‘helps’ to ‘help’.

Response- It has been corrected.

p.27, l.440 sentence (paragraph?) needs rewriting, it implies that complications exist as a result of the model, whereas they are practical considerations which are in place. Either the model should consider them, or perhaps the outcomes of modelling could influence the strategy in the future.

Response- We have rephrased the sentence. It now reads, “However, the model considers some areas in West Africa which had few or no tsetse flies present in which trypanocides are only given when cattle show signs of disease”.

p.28, l.450 Doesn’t this also impact tsetse? Or does their strange, for an insect, reproduction make this less likely? I guess so.

Response- We have included a sentence which reads, “This resistance is less likely in tsetse flies because they are K-strategists, in which case they have low reproducing capacity with very high success rate”.

p.28, l.464 I think you mean a low rate of infection could persist rather than a slight infection. Or a small population of tsetse through reintroduction/migration result ing on-going infections.

Response- We have modified the sentence to read that a low rate of infection could still persist.

p.28, l.468 ‘...except cattle are...’ implies to me that all cattle are kept in intensive, optimal conditions. Is this right? Or do you mean ‘...except where cattle are...’?

Response- Many thanks. We have corrected the sentence to except where cattle are.

p.28, l.473 change ‘However, it is expected to use artificial baits and targets (ITT) in the other parts where cattle do not visit’ to ‘However, the use of artificial baits and targets (ITT) is expected in the parts where cattle do not visit’

Response- Response- It has been corrected as suggested by the reviewer.

p.29, l.479 change ‘...costs...was...’ to ‘...costs...were...’

Response- It has been corrected.

p.29, l.483 I’m not sure what this sentence means. The tsetse is infected, bites a treated host and transmits to the host before dying. So what is the bit about the tsetse becoming infected through feeding about? And then I don’t see how the following sentences carry on from this.

Response- The sentence has been modified properly. It now reads, “It is expected that infected tsetse population would reduce due to the insecticide treatment, rather than the tsetse becoming infected through feeding”.

p.30, l.517 I think ‘sufficiently eliminated’ should be ‘eliminated’ or ‘sufficiently controlled’.

Response- Response- It has been corrected to sufficiently controlled.

Sensitivity analysis? Variability in parameters?

Response- We did not conduct sensitivity analysis, which could be done with consideration of other variables in future studies. We conducted parameter estimation which has been included in the data analysis. It is written as, “The estimation of parameters was achieved using the least squares method in Excel solver [34], with a view to minimising summation of squared errors given by ∑(Y(t; p)-Xreal)2 subject to the AAT model (0.1)-(0.16) where Xreal is the field reported data, and Y(t; p) represents the solution of the model corresponding to the number of active cases divided by time t with the set of estimated parameters denoted by p”.

Note- Tsetse team members have been acknowledged.

REVIEWER’S COMMENT

Reviewer #1:

-Please consider rewriting sentences in lines 42, 67-70, 74, 191, 283, 425, 474-476, 493, 486, 497 for clarity. These sentences dont read fine to me

Response- The whole manuscript has been edited again by the English-speaking co-authors on the manuscript.

-fly insecticide resistance referred to in line 77 should be changed to biting flies insecticide resistance.... Insecticide resistance is not an issue for tsetse flies

Response- This has been corrected

-provide a table legend for table 1 explaining methods for parameter estimation in all instances where parameters were estimated

Response- A comment on parameter/data estimation has been provided under data analysis section. We observed that it fits well in that section.

-Lines 199-205: please provide appropriate references to support the assumptions therein

Response- This has been provided

-Line 219: ...moleculary...What do the authors mean here? which molecular techniques are these?

Response- It has been written as “screened for trypanosome DNA”

-Lines 220221-----highest prevalences of T.congolense and T.vivax...Provide these prevalence estimates in brackets after each trypanosome category

Response- The study reported highest prevalence of T. congolense 11.0% (95%CI: 8.5–14.2) and T. vivax 14.7% (95%CI: 10.96–19.49) in the wet and dry seasons, respectively.

-Line 236...((FAA)... change to .....(FAA)

Response- This has been corrected.

-Lines 405-406: Please provide a denominator for each of these costs. Overall elimination costs should be stated with the size of the operation area and the number of years it would take to achieve elimination.

Response- A sentence that reads below has been included, “The overall elimination costs was US$ 17,963,490 per annum in an area of 78,000 km2 of southwest Nigeria, in which elimination could be achieved within three years of consistent control measures”.

-Lines 463-464; provide an explanation why this is the case

Response- This has been thoroughly explained in the manuscript. Without, ITT the model shows that areas beyond the target areas could pose risk from infected transmitting vectors.

-Lines 480-481: please give an explanation of how different livestock numbers, manpower etc are between Eastern uganda and West Nigeria

Response- We have earlier stated that “This could be attributed to the number of livestock, management practices, manpower and density of flies”. The infected fly density and management practices in these two areas differ and could be responsible for differences in the cost estimated.

-Make sure that the colours used in the tsetse plan figures are the exact colours provided in the figure keys. Figures 2 and 3 seem to have discrepancies in the colours used and those provided in the figure keys.

Responses- For the tsetse plan figures, we used generated figures directly from the software. Legend has been included for figure 3. The colours were generated from the software used.

Reviewer #2:

The manuscript is a big improvement on the previous version. However, it still requires considerable work to improve clarity and make it publishable.

Response- We have greatly improved the manuscript now.

The actual structure of the study is unclear, and how the three components (the modelling, field work and the Tsetse Plan runs) tie together, how each informs the other. There are no citations for the Tsetse Plan software.

Response- We have included a brief statement on the linkages between the field/experimental, Tsetse Plan and the mathematical model provide the results and conclusion of this work. While Tsetse Plan gives the results on implementation and cost control directly from the field scenario in southwest Nigeria, mathematical model provides a more holistic result on elimination of the disease in western Africa. This section explains how the field and experimental work were done, the generated results were used to create a field scenario in the Tsetse Plan to inform the best control strategies for elimination, including the cost. However, in the mathematical model, apart from using some of the field values, we analysed the probability and correctness by incorporating all the interacting populations involved (vertebrate host- cattle, small ruminants and wildlife, tsetse flies, biting flies- Stomoxys and tabanids and the parasites- T. vivax, T. congolense and T. b. brucei) using different mathematical tools. Our numerical analyses provide the best control approach (combining the field report, experimental results and Tsetse Plan reports) and suggesting likely outcomes of AAT situation if some measures are instituted

There is no consideration of variability in the parameters of the model (or used in other steps) - no sensitivity analysis or sampling of parameters. I acknowledge that this paper is the initial development of the model and maybe this will come in later publications, but it should be acknowledged and discussed rather than presenting the outcomes as definitive answers.

Response- All the analyses done were mainly mathematical. On the matter of sensitivity analysis, we would leave it for future scientific work. Many thanks

Is there evidence that tsetse flies are not required to maintain trypanosome populations? Are there no stages of the lifecycle that require this biological vector? Otherwise, removal of tsetse would result in removal of disease even if biting flies were present (although maybe with some lag).

Response-Some species of trypanosomes such as T. vivax can be transmitted without tsetse flies. We have included examples, “For instance, T. vivax has managed to maintain itself in South America where tsetse flies are absent, with Tabanidae and Stomoxys acting as mechanical vectors [Reis et al., 2019]. Similarly, Anene et al. [7] observed that T. vivax was maintained in the flock by tabanids in tsetse-free areas in Nigeria”. Not all species of trypanosomes require the tsetse fly phase to cause infection. Many thanks

I have made quite a few suggestions for minor changes in the attachment, however a more thorough re-write would still be appropriate.

Response- All the suggestions have been adhered to. We have made the document a lot better.

Attachment

Submitted filename: Response to reviewers.docx

Decision Letter 2

Simon Clegg

3 Nov 2020

Mathematical modelling and control of African animal trypanosomosis with interacting populations in West Africa- could biting flies be important in maintaining the disease endemicity?

PONE-D-20-18752R2

Dear Dr. Odeniran,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

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Acceptance letter

Simon Clegg

10 Nov 2020

PONE-D-20-18752R2

Mathematical Modelling and Control of African Animal Trypanosomosis with Interacting Populations in West Africa- Could Biting Flies be Important in Main taining the Disease Endemicity?

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Fig. Vegetation of operational and adjacent areas to be baited.

    (PDF)

    S2 Fig. Existing problems or adversities affecting vector flies in operational and adjacent areas to be baited.

    (PDF)

    S3 Fig. Pretreatment population in operational and adjacent areas to be baited.

    (PDF)

    S4 Fig. Total areas estimated to be baited.

    (PDF)

    S1 Table. Elimination cost of tsetse vector in southwest Nigeria.

    (DOCX)

    S2 Table. Elimination strategies for tsetse flies in cattle rearing areas of southwest Nigeria using the tsetse model approach.

    (DOCX)

    Attachment

    Submitted filename: Response to the reviewers.docx

    Attachment

    Submitted filename: rereview.pdf

    Attachment

    Submitted filename: Response to reviewers.docx

    Data Availability Statement

    All relevant data are within the paper and its Supporting information files.


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