Antibodies |
|
Mouse monoclonal (SAP7F407) anti-bassoon |
Novus Biologicals |
Cat. # NB120-13249; RRID: AB_788125
|
Rabbit polyclonal anti-Homer1 |
Synaptic Systems |
Cat. #1 60003; RRID: AB_887730
|
Guinea pig polyclonal anti-GLT-1 |
Merck |
Cat. # AB1783; RRID: AB_90949
|
Donkey anti-mouse IgG |
Biotium |
Cat. # 20105; RRID: AB_10557030
|
Goat anti-rabbit IgG |
Rockland |
Cat. #6 11-152-122S; RRID: AB_10893832
|
Donkey anti-guinea pig IgG |
Jackson ImmunoResearch Labs |
Cat. # 706-606-148; RRID: AB_2340477
|
|
Bacterial and Virus Strains |
|
AAV9.hSynap.iGluSnFr.WPRE.SV40 |
Penn Vector Core; Marvin et al., 2013
|
Addgene Cat. # 98929-AAV9 |
AAV5.GfaABC1D.Pi.lck-GFP.SV40 |
Penn Vector Core |
Addgene Cat. #105598-AAV5 |
AAV5.GfaABC1D.Pi.lck-GCaMP6f.SV40 |
Penn Vector Core |
Addgene Cat. # 52924-AAV5 Batch: CS0846L |
AAV GFAP-iGluSnFR |
Penn Vector Core |
Addgene Cat. # 44332-AAV5 |
AAV5.GfaABC1D.cyto-tdTomato.SV40 |
Penn Vector Core; Shigetomi et al., 2013
|
Cat:AV-5-PV3106; Lot: V5606L; RRID: Addgene_44332 |
AAV9.Syn.GCaMP6f.WPRE.SV40 |
Penn Vector Core |
Cat: AV-9-PV2822; Lot: CS0932; RRID: Addgene_100837 |
|
Chemicals, Peptides, and Recombinant Proteins |
|
DNI-GLU-TFA |
Femtonics |
DNI-GLU-TFA |
Picrotoxin |
Tocris |
Cat. # 1128 |
CGP 52432 |
Tocris |
Cat. # 1246/10 |
Bumetanide |
Tocris |
Cat. # 3108 |
Biocytin |
Sigma-Aldrich |
Cat. # B4261 |
NMDA |
Tocris |
Cat. # 0114/50 |
Biotin-tag, Synthetized as double stranded DNA |
Epoch Life Science |
PinPoint™ Xa-1 (Promega #V2031) |
pRSET FLIPE-600n |
Wolf B. Frommer |
Addgene #13537 |
pRSET bFLIPE600n |
This paper |
N/A |
Sulfo-NHS EZ Link Biotin |
ThermoFisher |
Cat. #21217 |
Streptavidin, unconjugated |
ThermoFisher |
Cat. #SNN1001 |
(+)-MK-801 hydrogen maleate |
Sigma Aldrich |
Cat. #M107 |
D-APV |
Abcam |
Cat. #ab120003 |
NBQX disodium salt |
Abcam |
Cat. #ab120046 |
Ro 25-6981 maleate salt |
Abcam |
Cat. #ab120290 |
S3 Fragment, ADF/cofilin |
Anaspec |
Cat. #AS-62637 |
Oregon Green 488 BAPTA-1 |
ThermoFisher |
Cat. #O6806 |
Picrotoxin |
Tocris |
Cat. #1128 |
CGP52432 |
Tocris |
Cat. #1246 |
MNI-caged-L-glutamate |
Bio-Techne Ltd |
Cat-#1490 |
DL-AP5 |
Bio-Techne Ltd |
Cat. # 0105 |
CGP 52432 |
Bio-Techne Ltd |
Cat. # 1246 |
NBQX disodium salt |
Bio-Techne Ltd |
Cat. # 1044 |
TFB-TBOA |
Bio-Techne Ltd |
Cat. # 2532 |
Tetrodotoxin citrate |
Bio-Techne Ltd |
Cat. # 1069 |
WIN 55,212-2 mesylate |
Bio-Techne Ltd |
Cat. # 1038 |
DHPG |
Bio-Techne Ltd |
Cat. # 0805 |
Muscimol |
Bio-Techne Ltd |
Cat. # 0289 |
MK 801 |
Bio-Techne Ltd |
Cat. # 0924 |
Chonditinase ABC |
Sigma-Aldrich |
Cat-# C3667 |
nEphrin-A4/FC Chimera |
Sigma-Aldrich |
Cat. # E0403 |
Fc Fragment |
Sigma-Aldrich |
Cat. # AG714 |
TGN-020 |
Sigma-Aldrich |
Cat. # SML0136 |
Bumetanide |
Sigma-Aldrich |
Cat. # B3023 |
Alexa Fluor-594 Hydrazide |
ThermoFisher Scientific |
Cat.# A10438 |
Alexa Fluor-488 Hydrazide |
ThermoFisher Scientific |
Cat.#A10436 |
Fluo-4, Pentapotassium Salt |
ThermoFisher Scientific |
Cat.# F14200
|
Oregon Green 488 BAPTA-1, Hexapotassium Salt |
ThermoFisher Scientific |
Cat.# O6806 |
NPE-Caged Ins 1,4,5-P3
|
ThermoFisher Scientific |
Cat. # I23580
|
Antisedan |
Vetoquinol |
Cat. # 459180 |
Carprofen Rimadyl |
Zoetis |
N/A |
Forskolin |
Sigma-Aldrich |
Cat. # F6886/3917 |
VECTASTAIN® ABC-HRP Kit |
Vector labs, USA |
Cat. #PK-4000 |
Picrotoxin |
Sigma-Aldrich |
Cat. #P1675; CAS: 124-87-8 |
Forskolin |
Cayman Chemical |
Cat. #11018; CAS: 66575-29-9 |
Rolipram |
Cayman Chemical |
Cat. #31111; CAS: 85416-75-7 |
NaBH4
|
Sigma-Aldrich |
Cat. #71320; CAS: 16940-66-2 |
PBS |
Sigma-Aldrich |
Cat. #4417 |
CuSO4
|
Sigma-Aldrich |
Cat. #C8027; CAS: 7758-99-8 |
NH4Cl |
Sigma-Aldrich |
Cat. #254134; CAS: 12125-02-9 |
Saponin |
Bio Basic |
Cat. #SB4521; CAS: 8047-15-2 |
BSA |
Sigma-Aldrich |
Cat. #A7906 CAS: 9048-46-8 |
Urea |
Sigma-Aldrich |
Cat. #U6504; CAS: 57-13-6 |
Glycerol |
Fisher Scientific |
Cat. #BP229-1 CAS: 56-81-5 |
Triton X-100 |
Sigma-Aldrich |
Cat. #T9284; CAS: 9002-93-1 |
Agarose |
Sigma-Aldrich |
Cat. #9539; CAS: 9012-36-6 |
Catalase |
Sigma-Aldrich |
Cat. #C40; CAS: 9001-05-2 |
glucose oxidase |
Sigma-Aldrich |
Cat. #G2133; CAS: 9001-37-0 |
glucose |
Sigma-Aldrich |
Cat. #G8270; CAS: 50-99-7 |
KCl |
Sigma-Aldrich |
Cat. #P9333; CAS: 7447-40-7 |
MEA-HCl |
Sigma-Aldrich |
Cat. #M6500; CAS: 56-57-0 |
PFA |
Sigma-Aldrich |
Cat. #P6148; CAS: 30525-89-4 |
TCEP |
Sigma-Aldrich |
Cat. #C4706; CAS: 51805-45-9 |
Tris base |
Sigma-Aldrich |
Cat. #33742; CAS: 77-86-1 |
DAB |
Sigma-Aldrich |
Cat. #D5905-50TAB |
|
Experimental Models: Organisms/Strains |
|
Mouse: C57BL/6J |
Charles River Laboratories |
C57BL/6NCrl Strain: 0159 |
Mouse: C57BL/6J |
Charles River UK |
RRID: IMSR_JAX:000664 |
Rat: Sprague-Dawley |
Charles River Laboratories |
Crl:CD (SD) Strain: 0204 |
Transgenic mouse line hGFAP-EGFP |
Frank Kirchoff; Nolte et al., 2001
|
MGI ID:6188855
|
Wistar rats |
Charles River Laboratories |
Strain Code: 003 |
Mouse: Aqp4flox/flox. Strain background: C57BL/6J |
Ole Petter Ottersen; Haj-Yasein et al., 2011
|
N/A |
Thy1-YFP-H: B6.Cg-Tg(Thy1-YFPH)2Jrs/J |
The Jackson Laboratory |
Stock No: 003782 |
|
Software and Algorithms |
|
ImageJ |
NIH |
RRID:SCR_003070; https://imagej.nih.gov/ij/
|
pClamp10 |
Molecular Devices |
RRID: SCR_011323; https://www.moleculardevices.com/products/axon-patch-clamp-system/acquisition-and-analysis-software/pclamp-software-suite
|
OriginPro |
OriginLab Inc |
RRID: SCR_014212; https://www.originlab.com/origin
|
MES 4.x-5.x |
Femtonics Ltd. |
RRID:SCR_018309; https://uk.mathworks.com/products/connections/product_detail/femtonics-mes.html
|
Imspector Image Acquisition & Analysis Software v0.1 |
Abberior Instruments Development Team |
RRID:SCR_015249; https://imspectordocs.readthedocs.io/en/latest/intro.html
|
Huygens STED Deconvolution Software |
Huygens Professional (SVI) |
RRID:SCR_014237; https://svi.nl/Huygens-Deconvolution
|
WinWCP Versions 4.x-5.x |
Strathclyde Electrophysiology Software |
RRID:SCR_014270; http://spider.science.strath.ac.uk/sipbs/software_ses.htm
|
SymPhoTime 64 |
PicoQuant |
RRID:SCR_016263; https://www.picoquant.com/products/category/software/symphotime-64-fluorescence-lifetime-imaging-and-correlation-software
|
SEM. Align 1.26b |
John Fiala, Boston University |
https://synapseweb.clm.utexas.edu |
Trace 1.26b |
John Fiala, Boston University |
https://synapseweb.clm.utexas.edu |
Autodesk 3D studio Max 8 |
Autodesk |
https://www.autodesk.com |
MATLAB |
Mathworks |
RRID:SCR_001622; https://uk.mathworks.com/products/matlab.html
|
|
Other |
|
Multiclamp 700B |
Molecular Devices |
RRID:SCR_018455
|
Olympus FluoView1000 |
Olympus |
RRID:SCR_014215
|
Femto2D |
Femtonics |
Femto2D |
Femto3D RC |
Femtonics |
Femto3D RC |
BioRad Radiance 2100 |
BioRad |
Radiance 2100 |